Multiple sequence alignment - TraesCS3B01G199900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G199900 chr3B 100.000 2881 0 0 1 2881 228692033 228689153 0.000000e+00 5321.0
1 TraesCS3B01G199900 chr3B 92.909 550 37 2 2332 2881 771414590 771414043 0.000000e+00 798.0
2 TraesCS3B01G199900 chr3B 79.048 630 128 4 1250 1877 556960059 556959432 2.050000e-116 429.0
3 TraesCS3B01G199900 chr3A 90.561 1960 98 42 396 2318 170810873 170812782 0.000000e+00 2514.0
4 TraesCS3B01G199900 chr3A 80.099 608 109 9 1258 1859 559334346 559334947 2.630000e-120 442.0
5 TraesCS3B01G199900 chr3D 90.772 1929 85 43 411 2309 157444167 157442302 0.000000e+00 2490.0
6 TraesCS3B01G199900 chr3D 80.594 572 105 6 1309 1877 427289042 427288474 1.230000e-118 436.0
7 TraesCS3B01G199900 chr3D 79.206 630 127 4 1250 1877 427294807 427294180 4.410000e-118 435.0
8 TraesCS3B01G199900 chr3D 78.431 612 115 12 1261 1862 157540561 157539957 1.620000e-102 383.0
9 TraesCS3B01G199900 chr3D 96.809 94 2 1 3 95 402938832 402938925 3.840000e-34 156.0
10 TraesCS3B01G199900 chr3D 94.949 99 4 1 3 100 113450589 113450687 1.380000e-33 154.0
11 TraesCS3B01G199900 chr3D 94.340 53 3 0 1081 1133 451709915 451709967 6.620000e-12 82.4
12 TraesCS3B01G199900 chr3D 92.857 56 3 1 1081 1135 451885414 451885469 2.380000e-11 80.5
13 TraesCS3B01G199900 chr6B 94.727 550 29 0 2332 2881 41899147 41898598 0.000000e+00 856.0
14 TraesCS3B01G199900 chr6B 92.780 554 38 2 2329 2881 618933777 618934329 0.000000e+00 800.0
15 TraesCS3B01G199900 chr6B 94.949 99 4 1 3 100 662008625 662008723 1.380000e-33 154.0
16 TraesCS3B01G199900 chr6B 92.308 39 3 0 273 311 701243780 701243818 4.010000e-04 56.5
17 TraesCS3B01G199900 chr1D 94.364 550 30 1 2332 2881 209755189 209755737 0.000000e+00 843.0
18 TraesCS3B01G199900 chr2B 94.033 553 32 1 2329 2881 643124472 643125023 0.000000e+00 837.0
19 TraesCS3B01G199900 chr2B 92.683 41 2 1 273 312 528842252 528842292 1.110000e-04 58.4
20 TraesCS3B01G199900 chr5B 93.818 550 33 1 2332 2881 693958453 693957905 0.000000e+00 826.0
21 TraesCS3B01G199900 chr5B 80.259 618 114 8 1250 1863 700997584 700998197 2.620000e-125 459.0
22 TraesCS3B01G199900 chr5B 89.404 151 16 0 100 250 438602629 438602479 1.050000e-44 191.0
23 TraesCS3B01G199900 chr5B 94.949 99 4 1 3 100 149477169 149477071 1.380000e-33 154.0
24 TraesCS3B01G199900 chr1B 93.502 554 34 2 2329 2881 21280349 21280901 0.000000e+00 822.0
25 TraesCS3B01G199900 chr1B 94.949 99 4 1 3 100 221677024 221677122 1.380000e-33 154.0
26 TraesCS3B01G199900 chr1B 94.949 99 4 1 3 100 444906577 444906675 1.380000e-33 154.0
27 TraesCS3B01G199900 chr1B 94.949 99 4 1 3 100 532332598 532332696 1.380000e-33 154.0
28 TraesCS3B01G199900 chr1B 88.679 53 5 1 263 314 512787277 512787329 2.400000e-06 63.9
29 TraesCS3B01G199900 chr1B 100.000 28 0 0 607 634 1435185 1435158 5.000000e-03 52.8
30 TraesCS3B01G199900 chr1B 100.000 28 0 0 607 634 689679831 689679858 5.000000e-03 52.8
31 TraesCS3B01G199900 chr1B 100.000 28 0 0 607 634 689803453 689803480 5.000000e-03 52.8
32 TraesCS3B01G199900 chr7B 92.960 554 39 0 2328 2881 389092680 389093233 0.000000e+00 808.0
33 TraesCS3B01G199900 chr7B 92.308 143 11 0 100 242 327320729 327320587 1.350000e-48 204.0
34 TraesCS3B01G199900 chr7B 95.960 99 3 1 3 100 513612432 513612530 2.970000e-35 159.0
35 TraesCS3B01G199900 chr7B 100.000 37 0 0 275 311 600701700 600701736 5.150000e-08 69.4
36 TraesCS3B01G199900 chr5D 92.740 551 38 2 2332 2881 353956599 353957148 0.000000e+00 795.0
37 TraesCS3B01G199900 chr5D 89.610 154 15 1 100 253 278146353 278146505 8.150000e-46 195.0
38 TraesCS3B01G199900 chr5D 89.542 153 14 2 100 252 521732031 521732181 2.930000e-45 193.0
39 TraesCS3B01G199900 chr5D 97.143 35 0 1 274 307 304158907 304158873 1.110000e-04 58.4
40 TraesCS3B01G199900 chr4A 80.671 626 112 9 1250 1871 621009747 621009127 7.220000e-131 477.0
41 TraesCS3B01G199900 chr2D 89.474 152 16 0 100 251 485214639 485214488 2.930000e-45 193.0
42 TraesCS3B01G199900 chr2D 90.278 144 14 0 100 243 260316842 260316985 3.790000e-44 189.0
43 TraesCS3B01G199900 chr2D 85.294 68 7 3 246 312 89288265 89288200 1.850000e-07 67.6
44 TraesCS3B01G199900 chr2D 92.683 41 1 2 274 312 471697542 471697582 1.110000e-04 58.4
45 TraesCS3B01G199900 chr7D 89.404 151 16 0 100 250 573447367 573447217 1.050000e-44 191.0
46 TraesCS3B01G199900 chr6D 89.933 149 14 1 100 248 120758284 120758431 1.050000e-44 191.0
47 TraesCS3B01G199900 chr6D 89.032 155 14 2 100 253 244116357 244116205 3.790000e-44 189.0
48 TraesCS3B01G199900 chr4B 94.949 99 4 1 3 100 116049023 116048925 1.380000e-33 154.0
49 TraesCS3B01G199900 chr7A 85.075 67 7 3 246 311 143136742 143136806 6.660000e-07 65.8
50 TraesCS3B01G199900 chr5A 92.308 39 2 1 273 311 138089515 138089552 1.000000e-03 54.7
51 TraesCS3B01G199900 chrUn 100.000 28 0 0 607 634 283524181 283524154 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G199900 chr3B 228689153 228692033 2880 True 5321 5321 100.000 1 2881 1 chr3B.!!$R1 2880
1 TraesCS3B01G199900 chr3B 771414043 771414590 547 True 798 798 92.909 2332 2881 1 chr3B.!!$R3 549
2 TraesCS3B01G199900 chr3B 556959432 556960059 627 True 429 429 79.048 1250 1877 1 chr3B.!!$R2 627
3 TraesCS3B01G199900 chr3A 170810873 170812782 1909 False 2514 2514 90.561 396 2318 1 chr3A.!!$F1 1922
4 TraesCS3B01G199900 chr3A 559334346 559334947 601 False 442 442 80.099 1258 1859 1 chr3A.!!$F2 601
5 TraesCS3B01G199900 chr3D 157442302 157444167 1865 True 2490 2490 90.772 411 2309 1 chr3D.!!$R1 1898
6 TraesCS3B01G199900 chr3D 427288474 427289042 568 True 436 436 80.594 1309 1877 1 chr3D.!!$R3 568
7 TraesCS3B01G199900 chr3D 427294180 427294807 627 True 435 435 79.206 1250 1877 1 chr3D.!!$R4 627
8 TraesCS3B01G199900 chr3D 157539957 157540561 604 True 383 383 78.431 1261 1862 1 chr3D.!!$R2 601
9 TraesCS3B01G199900 chr6B 41898598 41899147 549 True 856 856 94.727 2332 2881 1 chr6B.!!$R1 549
10 TraesCS3B01G199900 chr6B 618933777 618934329 552 False 800 800 92.780 2329 2881 1 chr6B.!!$F1 552
11 TraesCS3B01G199900 chr1D 209755189 209755737 548 False 843 843 94.364 2332 2881 1 chr1D.!!$F1 549
12 TraesCS3B01G199900 chr2B 643124472 643125023 551 False 837 837 94.033 2329 2881 1 chr2B.!!$F2 552
13 TraesCS3B01G199900 chr5B 693957905 693958453 548 True 826 826 93.818 2332 2881 1 chr5B.!!$R3 549
14 TraesCS3B01G199900 chr5B 700997584 700998197 613 False 459 459 80.259 1250 1863 1 chr5B.!!$F1 613
15 TraesCS3B01G199900 chr1B 21280349 21280901 552 False 822 822 93.502 2329 2881 1 chr1B.!!$F1 552
16 TraesCS3B01G199900 chr7B 389092680 389093233 553 False 808 808 92.960 2328 2881 1 chr7B.!!$F1 553
17 TraesCS3B01G199900 chr5D 353956599 353957148 549 False 795 795 92.740 2332 2881 1 chr5D.!!$F2 549
18 TraesCS3B01G199900 chr4A 621009127 621009747 620 True 477 477 80.671 1250 1871 1 chr4A.!!$R1 621

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
507 513 0.036952 ACAGGTGACTTCATCCGCTG 60.037 55.0 0.0 0.0 40.21 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2322 2381 0.035439 CAAACACGCCCATAGGACCT 60.035 55.0 0.0 0.0 33.47 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 8.498054 AGAAAAACATCACCTATATGTCAGTG 57.502 34.615 0.00 0.00 36.56 3.66
69 70 8.103305 AGAAAAACATCACCTATATGTCAGTGT 58.897 33.333 0.00 0.00 36.56 3.55
70 71 7.849804 AAAACATCACCTATATGTCAGTGTC 57.150 36.000 0.00 0.00 36.56 3.67
71 72 6.544928 AACATCACCTATATGTCAGTGTCA 57.455 37.500 0.00 0.00 36.56 3.58
72 73 6.737720 ACATCACCTATATGTCAGTGTCAT 57.262 37.500 7.97 7.97 32.02 3.06
73 74 7.129457 ACATCACCTATATGTCAGTGTCATT 57.871 36.000 8.17 0.47 32.02 2.57
74 75 7.568349 ACATCACCTATATGTCAGTGTCATTT 58.432 34.615 8.17 3.67 32.02 2.32
75 76 7.496920 ACATCACCTATATGTCAGTGTCATTTG 59.503 37.037 8.17 0.42 32.02 2.32
76 77 6.946340 TCACCTATATGTCAGTGTCATTTGT 58.054 36.000 8.17 0.00 0.00 2.83
77 78 8.073467 TCACCTATATGTCAGTGTCATTTGTA 57.927 34.615 8.17 0.45 0.00 2.41
78 79 8.704668 TCACCTATATGTCAGTGTCATTTGTAT 58.295 33.333 8.17 0.00 0.00 2.29
79 80 9.330063 CACCTATATGTCAGTGTCATTTGTATT 57.670 33.333 8.17 0.00 0.00 1.89
80 81 9.547753 ACCTATATGTCAGTGTCATTTGTATTC 57.452 33.333 8.17 0.00 0.00 1.75
81 82 9.546428 CCTATATGTCAGTGTCATTTGTATTCA 57.454 33.333 8.17 0.00 0.00 2.57
84 85 7.926674 ATGTCAGTGTCATTTGTATTCATGA 57.073 32.000 0.00 0.00 0.00 3.07
85 86 7.742556 TGTCAGTGTCATTTGTATTCATGAA 57.257 32.000 11.26 11.26 0.00 2.57
86 87 8.164058 TGTCAGTGTCATTTGTATTCATGAAA 57.836 30.769 13.09 0.00 0.00 2.69
87 88 8.628280 TGTCAGTGTCATTTGTATTCATGAAAA 58.372 29.630 13.09 2.26 0.00 2.29
88 89 9.462174 GTCAGTGTCATTTGTATTCATGAAAAA 57.538 29.630 13.09 9.13 0.00 1.94
122 123 4.729595 AGTTTTCAAACTGTCGGTCAAAC 58.270 39.130 4.08 0.00 46.80 2.93
123 124 3.392769 TTTCAAACTGTCGGTCAAACG 57.607 42.857 0.00 0.00 0.00 3.60
124 125 2.296831 TCAAACTGTCGGTCAAACGA 57.703 45.000 0.00 0.00 41.13 3.85
125 126 2.828877 TCAAACTGTCGGTCAAACGAT 58.171 42.857 0.00 0.00 45.47 3.73
126 127 3.979948 TCAAACTGTCGGTCAAACGATA 58.020 40.909 0.00 0.00 45.47 2.92
127 128 4.370049 TCAAACTGTCGGTCAAACGATAA 58.630 39.130 0.00 0.00 45.47 1.75
128 129 4.809958 TCAAACTGTCGGTCAAACGATAAA 59.190 37.500 0.00 0.00 45.47 1.40
129 130 5.293814 TCAAACTGTCGGTCAAACGATAAAA 59.706 36.000 0.00 0.00 45.47 1.52
130 131 4.985044 ACTGTCGGTCAAACGATAAAAG 57.015 40.909 0.00 0.00 45.47 2.27
131 132 3.744426 ACTGTCGGTCAAACGATAAAAGG 59.256 43.478 0.00 0.00 45.47 3.11
132 133 3.068560 TGTCGGTCAAACGATAAAAGGG 58.931 45.455 0.00 0.00 45.47 3.95
133 134 2.078392 TCGGTCAAACGATAAAAGGGC 58.922 47.619 0.00 0.00 38.06 5.19
134 135 1.807742 CGGTCAAACGATAAAAGGGCA 59.192 47.619 0.00 0.00 35.47 5.36
135 136 2.226912 CGGTCAAACGATAAAAGGGCAA 59.773 45.455 0.00 0.00 35.47 4.52
136 137 3.304794 CGGTCAAACGATAAAAGGGCAAA 60.305 43.478 0.00 0.00 35.47 3.68
137 138 4.623002 GGTCAAACGATAAAAGGGCAAAA 58.377 39.130 0.00 0.00 0.00 2.44
138 139 4.684242 GGTCAAACGATAAAAGGGCAAAAG 59.316 41.667 0.00 0.00 0.00 2.27
139 140 4.149922 GTCAAACGATAAAAGGGCAAAAGC 59.850 41.667 0.00 0.00 0.00 3.51
140 141 4.054671 CAAACGATAAAAGGGCAAAAGCA 58.945 39.130 0.00 0.00 0.00 3.91
141 142 4.535526 AACGATAAAAGGGCAAAAGCAT 57.464 36.364 0.00 0.00 0.00 3.79
142 143 5.652994 AACGATAAAAGGGCAAAAGCATA 57.347 34.783 0.00 0.00 0.00 3.14
143 144 5.248870 ACGATAAAAGGGCAAAAGCATAG 57.751 39.130 0.00 0.00 0.00 2.23
144 145 4.097892 ACGATAAAAGGGCAAAAGCATAGG 59.902 41.667 0.00 0.00 0.00 2.57
145 146 4.338118 CGATAAAAGGGCAAAAGCATAGGA 59.662 41.667 0.00 0.00 0.00 2.94
146 147 5.506317 CGATAAAAGGGCAAAAGCATAGGAG 60.506 44.000 0.00 0.00 0.00 3.69
147 148 2.149973 AAGGGCAAAAGCATAGGAGG 57.850 50.000 0.00 0.00 0.00 4.30
148 149 1.298953 AGGGCAAAAGCATAGGAGGA 58.701 50.000 0.00 0.00 0.00 3.71
149 150 1.213926 AGGGCAAAAGCATAGGAGGAG 59.786 52.381 0.00 0.00 0.00 3.69
150 151 1.028130 GGCAAAAGCATAGGAGGAGC 58.972 55.000 0.00 0.00 0.00 4.70
151 152 1.683011 GGCAAAAGCATAGGAGGAGCA 60.683 52.381 0.00 0.00 0.00 4.26
152 153 2.094675 GCAAAAGCATAGGAGGAGCAA 58.905 47.619 0.00 0.00 0.00 3.91
153 154 2.493278 GCAAAAGCATAGGAGGAGCAAA 59.507 45.455 0.00 0.00 0.00 3.68
154 155 3.428589 GCAAAAGCATAGGAGGAGCAAAG 60.429 47.826 0.00 0.00 0.00 2.77
155 156 3.728385 AAAGCATAGGAGGAGCAAAGT 57.272 42.857 0.00 0.00 0.00 2.66
156 157 2.706339 AGCATAGGAGGAGCAAAGTG 57.294 50.000 0.00 0.00 0.00 3.16
157 158 2.191400 AGCATAGGAGGAGCAAAGTGA 58.809 47.619 0.00 0.00 0.00 3.41
158 159 2.776536 AGCATAGGAGGAGCAAAGTGAT 59.223 45.455 0.00 0.00 0.00 3.06
159 160 3.201708 AGCATAGGAGGAGCAAAGTGATT 59.798 43.478 0.00 0.00 0.00 2.57
160 161 3.950395 GCATAGGAGGAGCAAAGTGATTT 59.050 43.478 0.00 0.00 0.00 2.17
161 162 4.201990 GCATAGGAGGAGCAAAGTGATTTG 60.202 45.833 0.00 0.00 35.15 2.32
162 163 2.800250 AGGAGGAGCAAAGTGATTTGG 58.200 47.619 3.17 0.00 32.78 3.28
163 164 2.376518 AGGAGGAGCAAAGTGATTTGGA 59.623 45.455 3.17 0.00 32.78 3.53
164 165 3.011032 AGGAGGAGCAAAGTGATTTGGAT 59.989 43.478 3.17 0.00 32.78 3.41
165 166 4.228210 AGGAGGAGCAAAGTGATTTGGATA 59.772 41.667 3.17 0.00 32.78 2.59
166 167 4.949856 GGAGGAGCAAAGTGATTTGGATAA 59.050 41.667 3.17 0.00 32.78 1.75
167 168 5.418840 GGAGGAGCAAAGTGATTTGGATAAA 59.581 40.000 3.17 0.00 32.78 1.40
168 169 6.071391 GGAGGAGCAAAGTGATTTGGATAAAA 60.071 38.462 3.17 0.00 32.78 1.52
169 170 6.691508 AGGAGCAAAGTGATTTGGATAAAAC 58.308 36.000 3.17 0.00 32.78 2.43
170 171 6.494835 AGGAGCAAAGTGATTTGGATAAAACT 59.505 34.615 3.17 0.00 32.78 2.66
171 172 6.587608 GGAGCAAAGTGATTTGGATAAAACTG 59.412 38.462 3.17 0.00 32.78 3.16
172 173 6.458210 AGCAAAGTGATTTGGATAAAACTGG 58.542 36.000 3.17 0.00 32.78 4.00
173 174 5.120674 GCAAAGTGATTTGGATAAAACTGGC 59.879 40.000 3.17 0.00 32.78 4.85
174 175 6.222389 CAAAGTGATTTGGATAAAACTGGCA 58.778 36.000 0.00 0.00 0.00 4.92
175 176 6.418057 AAGTGATTTGGATAAAACTGGCAA 57.582 33.333 0.00 0.00 0.00 4.52
176 177 5.783111 AGTGATTTGGATAAAACTGGCAAC 58.217 37.500 0.00 0.00 0.00 4.17
177 178 5.539955 AGTGATTTGGATAAAACTGGCAACT 59.460 36.000 0.00 0.00 37.61 3.16
178 179 6.041979 AGTGATTTGGATAAAACTGGCAACTT 59.958 34.615 0.00 0.00 37.61 2.66
179 180 6.705825 GTGATTTGGATAAAACTGGCAACTTT 59.294 34.615 0.00 0.00 37.61 2.66
180 181 7.226523 GTGATTTGGATAAAACTGGCAACTTTT 59.773 33.333 7.48 7.48 37.61 2.27
181 182 6.917217 TTTGGATAAAACTGGCAACTTTTG 57.083 33.333 11.12 0.00 37.61 2.44
182 183 5.860941 TGGATAAAACTGGCAACTTTTGA 57.139 34.783 11.12 0.00 37.61 2.69
183 184 6.227298 TGGATAAAACTGGCAACTTTTGAA 57.773 33.333 11.12 0.00 37.61 2.69
184 185 6.644347 TGGATAAAACTGGCAACTTTTGAAA 58.356 32.000 11.12 0.00 37.61 2.69
185 186 7.106239 TGGATAAAACTGGCAACTTTTGAAAA 58.894 30.769 11.12 0.00 37.61 2.29
186 187 7.772757 TGGATAAAACTGGCAACTTTTGAAAAT 59.227 29.630 11.12 0.10 37.61 1.82
187 188 8.620416 GGATAAAACTGGCAACTTTTGAAAATT 58.380 29.630 11.12 0.00 37.61 1.82
190 191 7.552458 AAACTGGCAACTTTTGAAAATTAGG 57.448 32.000 0.00 0.00 37.61 2.69
191 192 5.610398 ACTGGCAACTTTTGAAAATTAGGG 58.390 37.500 0.00 0.00 37.61 3.53
192 193 4.967036 TGGCAACTTTTGAAAATTAGGGG 58.033 39.130 0.00 0.00 37.61 4.79
193 194 4.410555 TGGCAACTTTTGAAAATTAGGGGT 59.589 37.500 0.00 0.00 37.61 4.95
194 195 5.602978 TGGCAACTTTTGAAAATTAGGGGTA 59.397 36.000 0.00 0.00 37.61 3.69
195 196 6.099845 TGGCAACTTTTGAAAATTAGGGGTAA 59.900 34.615 0.00 0.00 37.61 2.85
196 197 6.993308 GGCAACTTTTGAAAATTAGGGGTAAA 59.007 34.615 0.00 0.00 0.00 2.01
197 198 7.499563 GGCAACTTTTGAAAATTAGGGGTAAAA 59.500 33.333 0.00 0.00 0.00 1.52
198 199 8.339714 GCAACTTTTGAAAATTAGGGGTAAAAC 58.660 33.333 0.00 0.00 0.00 2.43
199 200 9.384764 CAACTTTTGAAAATTAGGGGTAAAACA 57.615 29.630 0.00 0.00 0.00 2.83
200 201 9.607988 AACTTTTGAAAATTAGGGGTAAAACAG 57.392 29.630 0.00 0.00 0.00 3.16
201 202 8.983789 ACTTTTGAAAATTAGGGGTAAAACAGA 58.016 29.630 0.00 0.00 0.00 3.41
202 203 9.256477 CTTTTGAAAATTAGGGGTAAAACAGAC 57.744 33.333 0.00 0.00 0.00 3.51
203 204 6.563222 TGAAAATTAGGGGTAAAACAGACG 57.437 37.500 0.00 0.00 0.00 4.18
204 205 6.297582 TGAAAATTAGGGGTAAAACAGACGA 58.702 36.000 0.00 0.00 0.00 4.20
205 206 6.428771 TGAAAATTAGGGGTAAAACAGACGAG 59.571 38.462 0.00 0.00 0.00 4.18
206 207 5.494390 AATTAGGGGTAAAACAGACGAGT 57.506 39.130 0.00 0.00 0.00 4.18
207 208 2.833631 AGGGGTAAAACAGACGAGTG 57.166 50.000 0.00 0.00 0.00 3.51
208 209 2.044758 AGGGGTAAAACAGACGAGTGT 58.955 47.619 0.00 0.00 0.00 3.55
209 210 3.233507 AGGGGTAAAACAGACGAGTGTA 58.766 45.455 0.00 0.00 0.00 2.90
210 211 3.642848 AGGGGTAAAACAGACGAGTGTAA 59.357 43.478 0.00 0.00 0.00 2.41
211 212 4.285260 AGGGGTAAAACAGACGAGTGTAAT 59.715 41.667 0.00 0.00 0.00 1.89
212 213 5.481473 AGGGGTAAAACAGACGAGTGTAATA 59.519 40.000 0.00 0.00 0.00 0.98
213 214 5.578336 GGGGTAAAACAGACGAGTGTAATAC 59.422 44.000 0.00 0.00 0.00 1.89
214 215 6.158598 GGGTAAAACAGACGAGTGTAATACA 58.841 40.000 0.00 0.00 0.00 2.29
215 216 6.646240 GGGTAAAACAGACGAGTGTAATACAA 59.354 38.462 0.00 0.00 0.00 2.41
216 217 7.359514 GGGTAAAACAGACGAGTGTAATACAAC 60.360 40.741 0.00 0.00 0.00 3.32
217 218 7.383300 GGTAAAACAGACGAGTGTAATACAACT 59.617 37.037 0.00 0.00 0.00 3.16
218 219 9.398170 GTAAAACAGACGAGTGTAATACAACTA 57.602 33.333 0.00 0.00 0.00 2.24
219 220 8.516811 AAAACAGACGAGTGTAATACAACTAG 57.483 34.615 0.00 0.00 0.00 2.57
220 221 6.192234 ACAGACGAGTGTAATACAACTAGG 57.808 41.667 0.00 0.00 0.00 3.02
221 222 5.125097 ACAGACGAGTGTAATACAACTAGGG 59.875 44.000 0.00 0.00 0.00 3.53
222 223 4.643784 AGACGAGTGTAATACAACTAGGGG 59.356 45.833 0.00 0.00 0.00 4.79
223 224 3.131755 ACGAGTGTAATACAACTAGGGGC 59.868 47.826 0.00 0.00 0.00 5.80
224 225 3.131577 CGAGTGTAATACAACTAGGGGCA 59.868 47.826 0.00 0.00 0.00 5.36
225 226 4.202223 CGAGTGTAATACAACTAGGGGCAT 60.202 45.833 0.00 0.00 0.00 4.40
226 227 5.010314 CGAGTGTAATACAACTAGGGGCATA 59.990 44.000 0.00 0.00 0.00 3.14
227 228 6.461927 CGAGTGTAATACAACTAGGGGCATAA 60.462 42.308 0.00 0.00 0.00 1.90
228 229 7.202972 AGTGTAATACAACTAGGGGCATAAA 57.797 36.000 0.00 0.00 0.00 1.40
229 230 7.812306 AGTGTAATACAACTAGGGGCATAAAT 58.188 34.615 0.00 0.00 0.00 1.40
230 231 7.937394 AGTGTAATACAACTAGGGGCATAAATC 59.063 37.037 0.00 0.00 0.00 2.17
231 232 7.937394 GTGTAATACAACTAGGGGCATAAATCT 59.063 37.037 0.00 0.00 0.00 2.40
232 233 9.161572 TGTAATACAACTAGGGGCATAAATCTA 57.838 33.333 0.00 0.00 0.00 1.98
238 239 9.740710 ACAACTAGGGGCATAAATCTAATTATC 57.259 33.333 0.00 0.00 0.00 1.75
239 240 9.178758 CAACTAGGGGCATAAATCTAATTATCC 57.821 37.037 0.00 0.00 0.00 2.59
240 241 7.873195 ACTAGGGGCATAAATCTAATTATCCC 58.127 38.462 0.00 0.00 34.84 3.85
241 242 6.995081 AGGGGCATAAATCTAATTATCCCT 57.005 37.500 0.00 0.00 35.96 4.20
242 243 9.225682 CTAGGGGCATAAATCTAATTATCCCTA 57.774 37.037 0.00 0.00 39.05 3.53
243 244 8.476829 AGGGGCATAAATCTAATTATCCCTAA 57.523 34.615 0.00 0.00 37.64 2.69
244 245 8.336987 AGGGGCATAAATCTAATTATCCCTAAC 58.663 37.037 0.00 0.00 37.64 2.34
245 246 8.336987 GGGGCATAAATCTAATTATCCCTAACT 58.663 37.037 0.00 0.00 35.35 2.24
264 265 8.730680 CCCTAACTAATAATGATGGTTATGTGC 58.269 37.037 0.00 0.00 0.00 4.57
265 266 8.443160 CCTAACTAATAATGATGGTTATGTGCG 58.557 37.037 0.00 0.00 0.00 5.34
266 267 7.801716 AACTAATAATGATGGTTATGTGCGT 57.198 32.000 0.00 0.00 0.00 5.24
267 268 7.801716 ACTAATAATGATGGTTATGTGCGTT 57.198 32.000 0.00 0.00 0.00 4.84
268 269 8.896320 ACTAATAATGATGGTTATGTGCGTTA 57.104 30.769 0.00 0.00 0.00 3.18
269 270 9.502091 ACTAATAATGATGGTTATGTGCGTTAT 57.498 29.630 0.00 0.00 0.00 1.89
270 271 9.759259 CTAATAATGATGGTTATGTGCGTTATG 57.241 33.333 0.00 0.00 0.00 1.90
271 272 5.437289 AATGATGGTTATGTGCGTTATGG 57.563 39.130 0.00 0.00 0.00 2.74
272 273 3.879998 TGATGGTTATGTGCGTTATGGT 58.120 40.909 0.00 0.00 0.00 3.55
273 274 3.625313 TGATGGTTATGTGCGTTATGGTG 59.375 43.478 0.00 0.00 0.00 4.17
274 275 3.336138 TGGTTATGTGCGTTATGGTGA 57.664 42.857 0.00 0.00 0.00 4.02
275 276 3.879998 TGGTTATGTGCGTTATGGTGAT 58.120 40.909 0.00 0.00 0.00 3.06
276 277 3.625313 TGGTTATGTGCGTTATGGTGATG 59.375 43.478 0.00 0.00 0.00 3.07
277 278 3.548014 GGTTATGTGCGTTATGGTGATGC 60.548 47.826 0.00 0.00 0.00 3.91
278 279 1.748950 ATGTGCGTTATGGTGATGCA 58.251 45.000 0.00 0.00 36.73 3.96
279 280 1.085893 TGTGCGTTATGGTGATGCAG 58.914 50.000 0.00 0.00 39.50 4.41
280 281 1.338579 TGTGCGTTATGGTGATGCAGA 60.339 47.619 0.00 0.00 39.50 4.26
281 282 1.328680 GTGCGTTATGGTGATGCAGAG 59.671 52.381 0.00 0.00 39.50 3.35
282 283 0.940126 GCGTTATGGTGATGCAGAGG 59.060 55.000 0.00 0.00 0.00 3.69
283 284 0.940126 CGTTATGGTGATGCAGAGGC 59.060 55.000 0.00 0.00 41.68 4.70
284 285 1.312815 GTTATGGTGATGCAGAGGCC 58.687 55.000 0.00 0.00 40.13 5.19
285 286 0.918258 TTATGGTGATGCAGAGGCCA 59.082 50.000 5.01 0.00 40.13 5.36
286 287 0.471191 TATGGTGATGCAGAGGCCAG 59.529 55.000 5.01 0.00 40.13 4.85
287 288 2.124403 GGTGATGCAGAGGCCAGG 60.124 66.667 5.01 0.00 40.13 4.45
288 289 2.124403 GTGATGCAGAGGCCAGGG 60.124 66.667 5.01 0.00 40.13 4.45
289 290 2.611800 TGATGCAGAGGCCAGGGT 60.612 61.111 5.01 0.00 40.13 4.34
290 291 1.306911 TGATGCAGAGGCCAGGGTA 60.307 57.895 5.01 0.00 40.13 3.69
291 292 0.913934 TGATGCAGAGGCCAGGGTAA 60.914 55.000 5.01 0.00 40.13 2.85
292 293 0.475906 GATGCAGAGGCCAGGGTAAT 59.524 55.000 5.01 0.00 40.13 1.89
293 294 0.475906 ATGCAGAGGCCAGGGTAATC 59.524 55.000 5.01 0.00 40.13 1.75
294 295 1.149401 GCAGAGGCCAGGGTAATCC 59.851 63.158 5.01 0.00 0.00 3.01
296 297 0.761802 CAGAGGCCAGGGTAATCCTC 59.238 60.000 5.01 2.46 46.12 3.71
297 298 0.400670 AGAGGCCAGGGTAATCCTCC 60.401 60.000 5.01 0.00 46.12 4.30
298 299 0.400670 GAGGCCAGGGTAATCCTCCT 60.401 60.000 5.01 0.00 46.12 3.69
299 300 0.046397 AGGCCAGGGTAATCCTCCTT 59.954 55.000 5.01 0.00 46.12 3.36
300 301 0.927029 GGCCAGGGTAATCCTCCTTT 59.073 55.000 0.00 0.00 46.12 3.11
301 302 1.288037 GGCCAGGGTAATCCTCCTTTT 59.712 52.381 0.00 0.00 46.12 2.27
302 303 2.292257 GGCCAGGGTAATCCTCCTTTTT 60.292 50.000 0.00 0.00 46.12 1.94
303 304 3.053170 GGCCAGGGTAATCCTCCTTTTTA 60.053 47.826 0.00 0.00 46.12 1.52
304 305 4.571148 GGCCAGGGTAATCCTCCTTTTTAA 60.571 45.833 0.00 0.00 46.12 1.52
305 306 5.020795 GCCAGGGTAATCCTCCTTTTTAAA 58.979 41.667 0.00 0.00 46.12 1.52
306 307 5.482526 GCCAGGGTAATCCTCCTTTTTAAAA 59.517 40.000 0.00 0.00 46.12 1.52
307 308 6.573680 GCCAGGGTAATCCTCCTTTTTAAAAC 60.574 42.308 0.00 0.00 46.12 2.43
308 309 6.495526 CCAGGGTAATCCTCCTTTTTAAAACA 59.504 38.462 0.00 0.00 46.12 2.83
309 310 7.015779 CCAGGGTAATCCTCCTTTTTAAAACAA 59.984 37.037 0.00 0.00 46.12 2.83
310 311 8.425703 CAGGGTAATCCTCCTTTTTAAAACAAA 58.574 33.333 0.00 0.00 46.12 2.83
311 312 9.166222 AGGGTAATCCTCCTTTTTAAAACAAAT 57.834 29.630 0.00 0.00 44.06 2.32
312 313 9.214957 GGGTAATCCTCCTTTTTAAAACAAATG 57.785 33.333 0.00 0.00 0.00 2.32
313 314 9.772973 GGTAATCCTCCTTTTTAAAACAAATGT 57.227 29.630 0.00 0.00 0.00 2.71
317 318 8.885494 TCCTCCTTTTTAAAACAAATGTGATG 57.115 30.769 0.00 0.00 0.00 3.07
318 319 7.930865 TCCTCCTTTTTAAAACAAATGTGATGG 59.069 33.333 0.00 0.00 0.00 3.51
319 320 7.714813 CCTCCTTTTTAAAACAAATGTGATGGT 59.285 33.333 0.00 0.00 0.00 3.55
320 321 9.108284 CTCCTTTTTAAAACAAATGTGATGGTT 57.892 29.630 0.00 0.00 0.00 3.67
321 322 8.887717 TCCTTTTTAAAACAAATGTGATGGTTG 58.112 29.630 0.00 0.00 0.00 3.77
322 323 7.643371 CCTTTTTAAAACAAATGTGATGGTTGC 59.357 33.333 0.00 0.00 0.00 4.17
323 324 5.896922 TTAAAACAAATGTGATGGTTGCG 57.103 34.783 0.00 0.00 0.00 4.85
324 325 2.437200 AACAAATGTGATGGTTGCGG 57.563 45.000 0.00 0.00 0.00 5.69
325 326 0.038343 ACAAATGTGATGGTTGCGGC 60.038 50.000 0.00 0.00 0.00 6.53
326 327 1.072116 CAAATGTGATGGTTGCGGCG 61.072 55.000 0.51 0.51 0.00 6.46
327 328 2.211619 AAATGTGATGGTTGCGGCGG 62.212 55.000 9.78 0.00 0.00 6.13
328 329 3.918253 ATGTGATGGTTGCGGCGGT 62.918 57.895 9.78 0.00 0.00 5.68
329 330 4.101790 GTGATGGTTGCGGCGGTG 62.102 66.667 9.78 0.00 0.00 4.94
330 331 4.321966 TGATGGTTGCGGCGGTGA 62.322 61.111 9.78 0.00 0.00 4.02
331 332 3.053291 GATGGTTGCGGCGGTGAA 61.053 61.111 9.78 0.00 0.00 3.18
332 333 3.039202 GATGGTTGCGGCGGTGAAG 62.039 63.158 9.78 0.00 0.00 3.02
341 342 4.576993 GCGGTGAAGCCAAAATGG 57.423 55.556 0.00 0.00 41.55 3.16
342 343 1.665442 GCGGTGAAGCCAAAATGGT 59.335 52.632 0.00 0.00 40.46 3.55
343 344 0.667184 GCGGTGAAGCCAAAATGGTG 60.667 55.000 0.00 0.00 40.46 4.17
344 345 0.673437 CGGTGAAGCCAAAATGGTGT 59.327 50.000 0.00 0.00 40.46 4.16
345 346 1.335872 CGGTGAAGCCAAAATGGTGTC 60.336 52.381 0.00 0.00 40.46 3.67
346 347 1.963515 GGTGAAGCCAAAATGGTGTCT 59.036 47.619 0.00 0.00 40.46 3.41
347 348 2.365293 GGTGAAGCCAAAATGGTGTCTT 59.635 45.455 0.00 0.00 40.46 3.01
348 349 3.572255 GGTGAAGCCAAAATGGTGTCTTA 59.428 43.478 0.00 0.00 40.46 2.10
349 350 4.038642 GGTGAAGCCAAAATGGTGTCTTAA 59.961 41.667 0.00 0.00 40.46 1.85
350 351 5.452636 GGTGAAGCCAAAATGGTGTCTTAAA 60.453 40.000 0.00 0.00 40.46 1.52
351 352 6.223120 GTGAAGCCAAAATGGTGTCTTAAAT 58.777 36.000 0.00 0.00 40.46 1.40
352 353 6.366061 GTGAAGCCAAAATGGTGTCTTAAATC 59.634 38.462 0.00 0.00 40.46 2.17
353 354 6.041409 TGAAGCCAAAATGGTGTCTTAAATCA 59.959 34.615 0.00 0.00 40.46 2.57
354 355 6.610075 AGCCAAAATGGTGTCTTAAATCAT 57.390 33.333 0.00 0.00 40.46 2.45
355 356 6.400568 AGCCAAAATGGTGTCTTAAATCATG 58.599 36.000 0.00 0.00 40.46 3.07
356 357 6.014327 AGCCAAAATGGTGTCTTAAATCATGT 60.014 34.615 0.00 0.00 40.46 3.21
357 358 7.178274 AGCCAAAATGGTGTCTTAAATCATGTA 59.822 33.333 0.00 0.00 40.46 2.29
358 359 7.981225 GCCAAAATGGTGTCTTAAATCATGTAT 59.019 33.333 0.00 0.00 40.46 2.29
359 360 9.304731 CCAAAATGGTGTCTTAAATCATGTATG 57.695 33.333 0.00 0.00 31.35 2.39
360 361 8.810427 CAAAATGGTGTCTTAAATCATGTATGC 58.190 33.333 0.00 0.00 0.00 3.14
361 362 5.733226 TGGTGTCTTAAATCATGTATGCG 57.267 39.130 0.00 0.00 0.00 4.73
362 363 5.423886 TGGTGTCTTAAATCATGTATGCGA 58.576 37.500 0.00 0.00 0.00 5.10
363 364 5.523552 TGGTGTCTTAAATCATGTATGCGAG 59.476 40.000 0.00 0.00 0.00 5.03
364 365 5.435557 GTGTCTTAAATCATGTATGCGAGC 58.564 41.667 0.00 0.00 0.00 5.03
365 366 4.209080 TGTCTTAAATCATGTATGCGAGCG 59.791 41.667 0.00 0.00 0.00 5.03
366 367 4.209288 GTCTTAAATCATGTATGCGAGCGT 59.791 41.667 0.00 0.00 0.00 5.07
367 368 4.444388 TCTTAAATCATGTATGCGAGCGTC 59.556 41.667 0.00 0.00 0.00 5.19
368 369 2.515926 AATCATGTATGCGAGCGTCT 57.484 45.000 0.00 0.00 0.00 4.18
369 370 1.775869 ATCATGTATGCGAGCGTCTG 58.224 50.000 0.00 0.00 0.00 3.51
370 371 0.871592 TCATGTATGCGAGCGTCTGC 60.872 55.000 0.00 0.00 43.24 4.26
371 372 1.141665 ATGTATGCGAGCGTCTGCA 59.858 52.632 0.00 0.37 46.23 4.41
375 376 4.588551 TGCGAGCGTCTGCATTTA 57.411 50.000 0.00 0.00 46.23 1.40
376 377 3.064079 TGCGAGCGTCTGCATTTAT 57.936 47.368 0.00 0.00 46.23 1.40
377 378 2.217429 TGCGAGCGTCTGCATTTATA 57.783 45.000 0.00 0.00 46.23 0.98
378 379 1.858458 TGCGAGCGTCTGCATTTATAC 59.142 47.619 0.00 0.00 46.23 1.47
379 380 1.858458 GCGAGCGTCTGCATTTATACA 59.142 47.619 0.00 0.00 46.23 2.29
380 381 2.284150 GCGAGCGTCTGCATTTATACAA 59.716 45.455 0.00 0.00 46.23 2.41
381 382 3.242284 GCGAGCGTCTGCATTTATACAAA 60.242 43.478 0.00 0.00 46.23 2.83
382 383 4.552767 GCGAGCGTCTGCATTTATACAAAT 60.553 41.667 0.00 0.00 46.23 2.32
420 421 3.003394 TGCAGTGATCAAACCATAGGG 57.997 47.619 0.00 0.00 41.29 3.53
448 449 0.655733 ACCGTTCGTGCTGAAAACTG 59.344 50.000 0.00 0.00 38.60 3.16
450 451 1.070577 CCGTTCGTGCTGAAAACTGAG 60.071 52.381 0.00 0.00 38.60 3.35
507 513 0.036952 ACAGGTGACTTCATCCGCTG 60.037 55.000 0.00 0.00 40.21 5.18
526 532 0.466124 GATAAGCAGCCGGGAGAACT 59.534 55.000 2.18 0.00 0.00 3.01
546 553 0.592637 CACATGCACATGAACACCGT 59.407 50.000 17.19 0.00 41.20 4.83
580 593 7.918536 ATCTCATATAATAGGCAGCACAAAG 57.081 36.000 0.00 0.00 0.00 2.77
595 608 0.940991 CAAAGTTTTGCTGCTCCGCC 60.941 55.000 0.00 0.00 0.00 6.13
606 619 1.153369 GCTCCGCCAGACATTAGCA 60.153 57.895 0.00 0.00 0.00 3.49
610 623 1.209261 TCCGCCAGACATTAGCATTCA 59.791 47.619 0.00 0.00 0.00 2.57
611 624 2.016318 CCGCCAGACATTAGCATTCAA 58.984 47.619 0.00 0.00 0.00 2.69
612 625 2.620115 CCGCCAGACATTAGCATTCAAT 59.380 45.455 0.00 0.00 0.00 2.57
613 626 3.304257 CCGCCAGACATTAGCATTCAATC 60.304 47.826 0.00 0.00 0.00 2.67
614 627 3.304257 CGCCAGACATTAGCATTCAATCC 60.304 47.826 0.00 0.00 0.00 3.01
615 628 3.633525 GCCAGACATTAGCATTCAATCCA 59.366 43.478 0.00 0.00 0.00 3.41
616 629 4.098349 GCCAGACATTAGCATTCAATCCAA 59.902 41.667 0.00 0.00 0.00 3.53
617 630 5.221382 GCCAGACATTAGCATTCAATCCAAT 60.221 40.000 0.00 0.00 0.00 3.16
618 631 6.444633 CCAGACATTAGCATTCAATCCAATC 58.555 40.000 0.00 0.00 0.00 2.67
619 632 6.444633 CAGACATTAGCATTCAATCCAATCC 58.555 40.000 0.00 0.00 0.00 3.01
726 739 1.433837 AAAGAAAACACCGACGCGCT 61.434 50.000 5.73 0.00 0.00 5.92
763 776 1.180029 CACTGCAAATCTCCCCTTGG 58.820 55.000 0.00 0.00 0.00 3.61
835 848 4.280461 CGACCGACTGATGAATACTGTAC 58.720 47.826 0.00 0.00 0.00 2.90
882 895 7.690454 TGCACCAAGGGCAGTATATATATAT 57.310 36.000 10.10 10.10 36.11 0.86
883 896 8.791298 TGCACCAAGGGCAGTATATATATATA 57.209 34.615 8.16 8.16 36.11 0.86
893 906 6.552629 CAGTATATATATATAGGCGTGCCGG 58.447 44.000 11.94 0.00 41.95 6.13
904 917 4.120331 GTGCCGGCACATGCTTCC 62.120 66.667 46.18 22.96 45.53 3.46
915 928 4.047834 TGCTTCCGCAGAACACAG 57.952 55.556 0.00 0.00 42.25 3.66
916 929 1.597854 TGCTTCCGCAGAACACAGG 60.598 57.895 0.00 0.00 42.25 4.00
918 931 1.569479 GCTTCCGCAGAACACAGGAC 61.569 60.000 0.00 0.00 35.78 3.85
919 932 1.284982 CTTCCGCAGAACACAGGACG 61.285 60.000 0.00 0.00 31.69 4.79
920 933 2.023414 TTCCGCAGAACACAGGACGT 62.023 55.000 0.00 0.00 31.69 4.34
922 935 1.007336 CCGCAGAACACAGGACGTAC 61.007 60.000 0.00 0.00 0.00 3.67
924 937 1.419374 GCAGAACACAGGACGTACAG 58.581 55.000 0.00 0.00 0.00 2.74
925 938 1.269621 GCAGAACACAGGACGTACAGT 60.270 52.381 0.00 0.00 0.00 3.55
926 939 2.802057 GCAGAACACAGGACGTACAGTT 60.802 50.000 0.00 1.22 0.00 3.16
927 940 3.551454 GCAGAACACAGGACGTACAGTTA 60.551 47.826 0.00 0.00 0.00 2.24
928 941 4.613944 CAGAACACAGGACGTACAGTTAA 58.386 43.478 0.00 0.00 0.00 2.01
929 942 4.680110 CAGAACACAGGACGTACAGTTAAG 59.320 45.833 0.00 0.00 0.00 1.85
930 943 3.022607 ACACAGGACGTACAGTTAAGC 57.977 47.619 0.00 0.00 0.00 3.09
931 944 2.363038 ACACAGGACGTACAGTTAAGCA 59.637 45.455 0.00 0.00 0.00 3.91
932 945 3.181473 ACACAGGACGTACAGTTAAGCAA 60.181 43.478 0.00 0.00 0.00 3.91
933 946 3.428870 CACAGGACGTACAGTTAAGCAAG 59.571 47.826 0.00 0.00 0.00 4.01
960 973 2.826128 TCCAAGCAGAGTACGATCTTGT 59.174 45.455 14.42 0.00 34.07 3.16
966 979 5.764131 AGCAGAGTACGATCTTGTATTAGC 58.236 41.667 0.00 0.00 0.00 3.09
970 983 4.856664 AGTACGATCTTGTATTAGCACCG 58.143 43.478 0.00 0.00 0.00 4.94
971 984 3.795623 ACGATCTTGTATTAGCACCGT 57.204 42.857 0.00 0.00 0.00 4.83
972 985 3.444916 ACGATCTTGTATTAGCACCGTG 58.555 45.455 0.00 0.00 0.00 4.94
982 995 1.520600 TAGCACCGTGTCTTGCTCGA 61.521 55.000 0.00 0.00 46.31 4.04
984 997 1.959899 GCACCGTGTCTTGCTCGATG 61.960 60.000 0.00 0.00 36.31 3.84
1029 1045 0.911045 TCAAGATGCTCCTGCTCCCA 60.911 55.000 0.00 0.00 40.48 4.37
1037 1053 4.711949 CCTGCTCCCAGCGCTGTT 62.712 66.667 33.75 0.00 46.26 3.16
1051 1067 1.136147 CTGTTCGCATTGCTGCTCC 59.864 57.895 7.12 0.00 46.65 4.70
1146 1162 1.135199 GGTGAGTCAATTCGGCTCGTA 60.135 52.381 0.00 0.00 32.32 3.43
1152 1168 0.248498 CAATTCGGCTCGTAGCTCGA 60.248 55.000 0.00 0.00 46.83 4.04
1173 1192 6.439599 TCGACATCTTTTTCGCCAAATTTAA 58.560 32.000 0.00 0.00 35.15 1.52
1174 1193 6.580791 TCGACATCTTTTTCGCCAAATTTAAG 59.419 34.615 0.00 0.00 35.15 1.85
1175 1194 6.580791 CGACATCTTTTTCGCCAAATTTAAGA 59.419 34.615 0.00 0.00 0.00 2.10
1176 1195 7.201266 CGACATCTTTTTCGCCAAATTTAAGAG 60.201 37.037 0.00 0.00 0.00 2.85
1178 1197 6.642707 TCTTTTTCGCCAAATTTAAGAGGA 57.357 33.333 0.00 0.00 0.00 3.71
1180 1199 7.090173 TCTTTTTCGCCAAATTTAAGAGGATG 58.910 34.615 0.00 0.00 0.00 3.51
1181 1200 5.975693 TTTCGCCAAATTTAAGAGGATGT 57.024 34.783 0.00 0.00 0.00 3.06
1182 1201 5.975693 TTCGCCAAATTTAAGAGGATGTT 57.024 34.783 0.00 0.00 0.00 2.71
1186 1205 5.336372 CGCCAAATTTAAGAGGATGTTTGGA 60.336 40.000 16.37 0.00 45.12 3.53
1187 1206 6.627953 CGCCAAATTTAAGAGGATGTTTGGAT 60.628 38.462 16.37 0.00 45.12 3.41
1188 1207 7.105588 GCCAAATTTAAGAGGATGTTTGGATT 58.894 34.615 16.37 0.00 45.12 3.01
1189 1208 7.064966 GCCAAATTTAAGAGGATGTTTGGATTG 59.935 37.037 16.37 0.00 45.12 2.67
1190 1209 8.096414 CCAAATTTAAGAGGATGTTTGGATTGT 58.904 33.333 8.57 0.00 45.12 2.71
1191 1210 8.928733 CAAATTTAAGAGGATGTTTGGATTGTG 58.071 33.333 0.00 0.00 0.00 3.33
1192 1211 8.421249 AATTTAAGAGGATGTTTGGATTGTGA 57.579 30.769 0.00 0.00 0.00 3.58
1193 1212 6.817765 TTAAGAGGATGTTTGGATTGTGAC 57.182 37.500 0.00 0.00 0.00 3.67
1194 1213 4.647564 AGAGGATGTTTGGATTGTGACT 57.352 40.909 0.00 0.00 0.00 3.41
1195 1214 5.762179 AGAGGATGTTTGGATTGTGACTA 57.238 39.130 0.00 0.00 0.00 2.59
1196 1215 5.491982 AGAGGATGTTTGGATTGTGACTAC 58.508 41.667 0.00 0.00 0.00 2.73
1197 1216 5.013079 AGAGGATGTTTGGATTGTGACTACA 59.987 40.000 0.00 0.00 34.31 2.74
1198 1217 5.248640 AGGATGTTTGGATTGTGACTACAG 58.751 41.667 0.00 0.00 38.23 2.74
1199 1218 5.003804 GGATGTTTGGATTGTGACTACAGT 58.996 41.667 0.00 0.00 38.23 3.55
1200 1219 6.013725 AGGATGTTTGGATTGTGACTACAGTA 60.014 38.462 0.00 0.00 38.23 2.74
1201 1220 6.092259 GGATGTTTGGATTGTGACTACAGTAC 59.908 42.308 0.00 0.00 38.23 2.73
1202 1221 5.919755 TGTTTGGATTGTGACTACAGTACA 58.080 37.500 0.00 0.00 35.77 2.90
1203 1222 6.530120 TGTTTGGATTGTGACTACAGTACAT 58.470 36.000 0.00 0.00 37.24 2.29
1204 1223 6.426633 TGTTTGGATTGTGACTACAGTACATG 59.573 38.462 0.00 0.00 37.24 3.21
1205 1224 5.084818 TGGATTGTGACTACAGTACATGG 57.915 43.478 0.00 0.00 32.97 3.66
1206 1225 3.871594 GGATTGTGACTACAGTACATGGC 59.128 47.826 0.00 0.00 38.23 4.40
1207 1226 4.383118 GGATTGTGACTACAGTACATGGCT 60.383 45.833 0.00 0.00 38.23 4.75
1208 1227 4.617253 TTGTGACTACAGTACATGGCTT 57.383 40.909 0.00 0.00 38.23 4.35
1209 1228 5.731957 TTGTGACTACAGTACATGGCTTA 57.268 39.130 0.00 0.00 38.23 3.09
1210 1229 5.932619 TGTGACTACAGTACATGGCTTAT 57.067 39.130 0.00 0.00 31.91 1.73
1211 1230 5.660460 TGTGACTACAGTACATGGCTTATG 58.340 41.667 0.00 0.84 36.24 1.90
1212 1231 4.508124 GTGACTACAGTACATGGCTTATGC 59.492 45.833 0.00 0.00 40.59 3.14
1213 1232 4.405680 TGACTACAGTACATGGCTTATGCT 59.594 41.667 0.00 0.00 40.59 3.79
1214 1233 4.950050 ACTACAGTACATGGCTTATGCTC 58.050 43.478 0.00 0.00 40.59 4.26
1343 1367 3.573489 CTTCAACAACGGCGCGTCC 62.573 63.158 6.90 7.39 39.99 4.79
1922 1953 5.587043 CCATGCTGCATGAAACCAAATTTAT 59.413 36.000 36.90 0.00 43.81 1.40
2016 2054 2.810852 TGCACTGCACGAATGATGTTTA 59.189 40.909 0.00 0.00 31.71 2.01
2025 2065 6.477360 TGCACGAATGATGTTTATGTACGTAT 59.523 34.615 0.00 0.00 0.00 3.06
2027 2067 7.849026 GCACGAATGATGTTTATGTACGTATTT 59.151 33.333 0.00 0.00 0.00 1.40
2044 2084 6.460781 ACGTATTTATCAGTGTGTTTCTGGA 58.539 36.000 0.00 0.00 34.15 3.86
2053 2093 3.627577 AGTGTGTTTCTGGATTGTGTGTC 59.372 43.478 0.00 0.00 0.00 3.67
2084 2124 1.903860 TCAGTGTATTTGGCTACCGGT 59.096 47.619 13.98 13.98 0.00 5.28
2099 2139 0.655733 CCGGTTGGATATTCACGCAC 59.344 55.000 0.00 0.00 37.49 5.34
2208 2266 6.899089 TCTCTCTGACTCTCTAGAATCATGT 58.101 40.000 0.00 0.00 29.40 3.21
2210 2268 7.931407 TCTCTCTGACTCTCTAGAATCATGTAC 59.069 40.741 0.00 0.00 29.40 2.90
2214 2272 8.462811 TCTGACTCTCTAGAATCATGTACAAAC 58.537 37.037 0.00 0.00 29.40 2.93
2312 2371 0.321122 CCCTCTATTGGCGAGCATCC 60.321 60.000 0.00 0.00 0.00 3.51
2318 2377 2.930385 ATTGGCGAGCATCCTCCACG 62.930 60.000 0.00 0.00 34.56 4.94
2319 2378 4.899239 GGCGAGCATCCTCCACGG 62.899 72.222 0.00 0.00 34.49 4.94
2320 2379 4.899239 GCGAGCATCCTCCACGGG 62.899 72.222 0.00 0.00 34.49 5.28
2321 2380 4.227134 CGAGCATCCTCCACGGGG 62.227 72.222 0.00 0.00 34.49 5.73
2322 2381 2.764128 GAGCATCCTCCACGGGGA 60.764 66.667 6.08 6.08 42.29 4.81
2330 2389 3.447261 TCCACGGGGAGGTCCTAT 58.553 61.111 0.00 0.00 38.64 2.57
2685 2745 0.471211 AGGAAGAAGACCACCGGACA 60.471 55.000 9.46 0.00 0.00 4.02
2789 2849 3.300857 ACATGAACGCTAGATTCGATCG 58.699 45.455 9.36 9.36 32.49 3.69
2851 2911 2.252714 AGAGGTAGCTAAGCATAGGGC 58.747 52.381 0.00 0.00 45.30 5.19
2871 2931 7.502060 AGGGCTAATTCATACTAGTGCATAT 57.498 36.000 5.39 0.00 0.00 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 9.599866 CACTGACATATAGGTGATGTTTTTCTA 57.400 33.333 0.00 0.00 37.65 2.10
43 44 8.103305 ACACTGACATATAGGTGATGTTTTTCT 58.897 33.333 0.00 0.00 37.65 2.52
44 45 8.268850 ACACTGACATATAGGTGATGTTTTTC 57.731 34.615 0.00 0.00 37.65 2.29
45 46 7.882791 TGACACTGACATATAGGTGATGTTTTT 59.117 33.333 0.00 0.00 37.65 1.94
46 47 7.394016 TGACACTGACATATAGGTGATGTTTT 58.606 34.615 0.00 0.00 37.65 2.43
47 48 6.946340 TGACACTGACATATAGGTGATGTTT 58.054 36.000 0.00 0.00 37.65 2.83
48 49 6.544928 TGACACTGACATATAGGTGATGTT 57.455 37.500 0.00 0.00 37.65 2.71
49 50 6.737720 ATGACACTGACATATAGGTGATGT 57.262 37.500 0.00 0.00 40.25 3.06
50 51 7.496920 ACAAATGACACTGACATATAGGTGATG 59.503 37.037 0.00 0.00 34.28 3.07
51 52 7.568349 ACAAATGACACTGACATATAGGTGAT 58.432 34.615 0.00 0.00 34.28 3.06
52 53 6.946340 ACAAATGACACTGACATATAGGTGA 58.054 36.000 0.00 0.00 34.28 4.02
53 54 8.893219 ATACAAATGACACTGACATATAGGTG 57.107 34.615 0.00 0.00 35.99 4.00
54 55 9.547753 GAATACAAATGACACTGACATATAGGT 57.452 33.333 0.00 0.00 0.00 3.08
55 56 9.546428 TGAATACAAATGACACTGACATATAGG 57.454 33.333 0.00 0.00 0.00 2.57
58 59 9.617523 TCATGAATACAAATGACACTGACATAT 57.382 29.630 0.00 0.00 0.00 1.78
59 60 9.447157 TTCATGAATACAAATGACACTGACATA 57.553 29.630 3.38 0.00 32.63 2.29
60 61 7.926674 TCATGAATACAAATGACACTGACAT 57.073 32.000 0.00 0.00 0.00 3.06
61 62 7.742556 TTCATGAATACAAATGACACTGACA 57.257 32.000 3.38 0.00 32.63 3.58
62 63 9.462174 TTTTTCATGAATACAAATGACACTGAC 57.538 29.630 9.40 0.00 32.63 3.51
96 97 5.774630 TGACCGACAGTTTGAAAACTTTTT 58.225 33.333 5.70 0.00 46.52 1.94
97 98 5.379732 TGACCGACAGTTTGAAAACTTTT 57.620 34.783 5.70 0.00 46.52 2.27
98 99 5.379732 TTGACCGACAGTTTGAAAACTTT 57.620 34.783 5.70 0.00 46.52 2.66
99 100 5.158494 GTTTGACCGACAGTTTGAAAACTT 58.842 37.500 5.70 0.00 46.52 2.66
100 101 6.817515 TCGTTTGACCGACAGTTTGAAAACT 61.818 40.000 2.56 2.56 39.74 2.66
101 102 3.540738 CGTTTGACCGACAGTTTGAAAAC 59.459 43.478 0.00 0.00 39.17 2.43
102 103 3.436015 TCGTTTGACCGACAGTTTGAAAA 59.564 39.130 0.00 0.00 30.63 2.29
103 104 3.001414 TCGTTTGACCGACAGTTTGAAA 58.999 40.909 0.00 0.00 30.63 2.69
104 105 2.619147 TCGTTTGACCGACAGTTTGAA 58.381 42.857 0.00 0.00 30.63 2.69
105 106 2.296831 TCGTTTGACCGACAGTTTGA 57.703 45.000 0.00 0.00 30.63 2.69
106 107 4.718858 TTATCGTTTGACCGACAGTTTG 57.281 40.909 0.00 0.00 40.08 2.93
107 108 5.277634 CCTTTTATCGTTTGACCGACAGTTT 60.278 40.000 0.00 0.00 40.08 2.66
108 109 4.212636 CCTTTTATCGTTTGACCGACAGTT 59.787 41.667 0.00 0.00 40.08 3.16
109 110 3.744426 CCTTTTATCGTTTGACCGACAGT 59.256 43.478 0.00 0.00 40.08 3.55
110 111 3.124636 CCCTTTTATCGTTTGACCGACAG 59.875 47.826 0.00 0.00 40.08 3.51
111 112 3.068560 CCCTTTTATCGTTTGACCGACA 58.931 45.455 0.00 0.00 40.08 4.35
112 113 2.159612 GCCCTTTTATCGTTTGACCGAC 60.160 50.000 0.00 0.00 40.08 4.79
113 114 2.078392 GCCCTTTTATCGTTTGACCGA 58.922 47.619 0.00 0.00 41.73 4.69
114 115 1.807742 TGCCCTTTTATCGTTTGACCG 59.192 47.619 0.00 0.00 0.00 4.79
115 116 3.926821 TTGCCCTTTTATCGTTTGACC 57.073 42.857 0.00 0.00 0.00 4.02
116 117 4.149922 GCTTTTGCCCTTTTATCGTTTGAC 59.850 41.667 0.00 0.00 40.15 3.18
117 118 4.202161 TGCTTTTGCCCTTTTATCGTTTGA 60.202 37.500 0.00 0.00 46.87 2.69
118 119 4.054671 TGCTTTTGCCCTTTTATCGTTTG 58.945 39.130 0.00 0.00 46.87 2.93
119 120 4.329462 TGCTTTTGCCCTTTTATCGTTT 57.671 36.364 0.00 0.00 46.87 3.60
120 121 4.535526 ATGCTTTTGCCCTTTTATCGTT 57.464 36.364 0.00 0.00 46.87 3.85
121 122 4.097892 CCTATGCTTTTGCCCTTTTATCGT 59.902 41.667 0.00 0.00 46.87 3.73
122 123 4.338118 TCCTATGCTTTTGCCCTTTTATCG 59.662 41.667 0.00 0.00 46.87 2.92
123 124 5.221322 CCTCCTATGCTTTTGCCCTTTTATC 60.221 44.000 0.00 0.00 46.87 1.75
124 125 4.651045 CCTCCTATGCTTTTGCCCTTTTAT 59.349 41.667 0.00 0.00 46.87 1.40
125 126 4.023291 CCTCCTATGCTTTTGCCCTTTTA 58.977 43.478 0.00 0.00 46.87 1.52
126 127 2.833943 CCTCCTATGCTTTTGCCCTTTT 59.166 45.455 0.00 0.00 46.87 2.27
127 128 2.042979 TCCTCCTATGCTTTTGCCCTTT 59.957 45.455 0.00 0.00 46.87 3.11
128 129 1.640670 TCCTCCTATGCTTTTGCCCTT 59.359 47.619 0.00 0.00 46.87 3.95
129 130 1.213926 CTCCTCCTATGCTTTTGCCCT 59.786 52.381 0.00 0.00 46.87 5.19
130 131 1.685148 CTCCTCCTATGCTTTTGCCC 58.315 55.000 0.00 0.00 46.87 5.36
131 132 1.028130 GCTCCTCCTATGCTTTTGCC 58.972 55.000 0.00 0.00 46.87 4.52
133 134 3.760684 ACTTTGCTCCTCCTATGCTTTTG 59.239 43.478 0.00 0.00 0.00 2.44
134 135 3.760684 CACTTTGCTCCTCCTATGCTTTT 59.239 43.478 0.00 0.00 0.00 2.27
135 136 3.009473 TCACTTTGCTCCTCCTATGCTTT 59.991 43.478 0.00 0.00 0.00 3.51
136 137 2.573462 TCACTTTGCTCCTCCTATGCTT 59.427 45.455 0.00 0.00 0.00 3.91
137 138 2.191400 TCACTTTGCTCCTCCTATGCT 58.809 47.619 0.00 0.00 0.00 3.79
138 139 2.698855 TCACTTTGCTCCTCCTATGC 57.301 50.000 0.00 0.00 0.00 3.14
139 140 4.337555 CCAAATCACTTTGCTCCTCCTATG 59.662 45.833 0.00 0.00 40.39 2.23
140 141 4.228210 TCCAAATCACTTTGCTCCTCCTAT 59.772 41.667 0.00 0.00 40.39 2.57
141 142 3.587061 TCCAAATCACTTTGCTCCTCCTA 59.413 43.478 0.00 0.00 40.39 2.94
142 143 2.376518 TCCAAATCACTTTGCTCCTCCT 59.623 45.455 0.00 0.00 40.39 3.69
143 144 2.795329 TCCAAATCACTTTGCTCCTCC 58.205 47.619 0.00 0.00 40.39 4.30
144 145 6.515272 TTTATCCAAATCACTTTGCTCCTC 57.485 37.500 0.00 0.00 40.39 3.71
145 146 6.494835 AGTTTTATCCAAATCACTTTGCTCCT 59.505 34.615 0.00 0.00 40.39 3.69
146 147 6.587608 CAGTTTTATCCAAATCACTTTGCTCC 59.412 38.462 0.00 0.00 40.39 4.70
147 148 6.587608 CCAGTTTTATCCAAATCACTTTGCTC 59.412 38.462 0.00 0.00 40.39 4.26
148 149 6.458210 CCAGTTTTATCCAAATCACTTTGCT 58.542 36.000 0.00 0.00 40.39 3.91
149 150 5.120674 GCCAGTTTTATCCAAATCACTTTGC 59.879 40.000 0.00 0.00 40.39 3.68
150 151 6.222389 TGCCAGTTTTATCCAAATCACTTTG 58.778 36.000 0.00 0.00 41.22 2.77
151 152 6.418057 TGCCAGTTTTATCCAAATCACTTT 57.582 33.333 0.00 0.00 0.00 2.66
152 153 6.041979 AGTTGCCAGTTTTATCCAAATCACTT 59.958 34.615 0.00 0.00 0.00 3.16
153 154 5.539955 AGTTGCCAGTTTTATCCAAATCACT 59.460 36.000 0.00 0.00 0.00 3.41
154 155 5.783111 AGTTGCCAGTTTTATCCAAATCAC 58.217 37.500 0.00 0.00 0.00 3.06
155 156 6.418057 AAGTTGCCAGTTTTATCCAAATCA 57.582 33.333 0.00 0.00 0.00 2.57
156 157 7.440856 TCAAAAGTTGCCAGTTTTATCCAAATC 59.559 33.333 3.23 0.00 34.32 2.17
157 158 7.278875 TCAAAAGTTGCCAGTTTTATCCAAAT 58.721 30.769 3.23 0.00 34.32 2.32
158 159 6.644347 TCAAAAGTTGCCAGTTTTATCCAAA 58.356 32.000 3.23 0.00 34.32 3.28
159 160 6.227298 TCAAAAGTTGCCAGTTTTATCCAA 57.773 33.333 3.23 0.00 34.32 3.53
160 161 5.860941 TCAAAAGTTGCCAGTTTTATCCA 57.139 34.783 3.23 0.00 34.32 3.41
161 162 7.546778 TTTTCAAAAGTTGCCAGTTTTATCC 57.453 32.000 3.23 0.00 34.32 2.59
164 165 9.103861 CCTAATTTTCAAAAGTTGCCAGTTTTA 57.896 29.630 3.23 0.00 34.32 1.52
165 166 7.066887 CCCTAATTTTCAAAAGTTGCCAGTTTT 59.933 33.333 0.00 0.00 36.16 2.43
166 167 6.542005 CCCTAATTTTCAAAAGTTGCCAGTTT 59.458 34.615 0.00 0.00 0.00 2.66
167 168 6.054941 CCCTAATTTTCAAAAGTTGCCAGTT 58.945 36.000 0.00 0.00 0.00 3.16
168 169 5.454613 CCCCTAATTTTCAAAAGTTGCCAGT 60.455 40.000 0.00 0.00 0.00 4.00
169 170 4.996758 CCCCTAATTTTCAAAAGTTGCCAG 59.003 41.667 0.00 0.00 0.00 4.85
170 171 4.410555 ACCCCTAATTTTCAAAAGTTGCCA 59.589 37.500 0.00 0.00 0.00 4.92
171 172 4.968259 ACCCCTAATTTTCAAAAGTTGCC 58.032 39.130 0.00 0.00 0.00 4.52
172 173 8.339714 GTTTTACCCCTAATTTTCAAAAGTTGC 58.660 33.333 0.00 0.00 0.00 4.17
173 174 9.384764 TGTTTTACCCCTAATTTTCAAAAGTTG 57.615 29.630 0.00 0.00 0.00 3.16
174 175 9.607988 CTGTTTTACCCCTAATTTTCAAAAGTT 57.392 29.630 0.00 0.00 0.00 2.66
175 176 8.983789 TCTGTTTTACCCCTAATTTTCAAAAGT 58.016 29.630 0.00 0.00 0.00 2.66
176 177 9.256477 GTCTGTTTTACCCCTAATTTTCAAAAG 57.744 33.333 0.00 0.00 0.00 2.27
177 178 7.921745 CGTCTGTTTTACCCCTAATTTTCAAAA 59.078 33.333 0.00 0.00 0.00 2.44
178 179 7.284944 TCGTCTGTTTTACCCCTAATTTTCAAA 59.715 33.333 0.00 0.00 0.00 2.69
179 180 6.771749 TCGTCTGTTTTACCCCTAATTTTCAA 59.228 34.615 0.00 0.00 0.00 2.69
180 181 6.297582 TCGTCTGTTTTACCCCTAATTTTCA 58.702 36.000 0.00 0.00 0.00 2.69
181 182 6.429078 ACTCGTCTGTTTTACCCCTAATTTTC 59.571 38.462 0.00 0.00 0.00 2.29
182 183 6.206048 CACTCGTCTGTTTTACCCCTAATTTT 59.794 38.462 0.00 0.00 0.00 1.82
183 184 5.704053 CACTCGTCTGTTTTACCCCTAATTT 59.296 40.000 0.00 0.00 0.00 1.82
184 185 5.221783 ACACTCGTCTGTTTTACCCCTAATT 60.222 40.000 0.00 0.00 0.00 1.40
185 186 4.285260 ACACTCGTCTGTTTTACCCCTAAT 59.715 41.667 0.00 0.00 0.00 1.73
186 187 3.642848 ACACTCGTCTGTTTTACCCCTAA 59.357 43.478 0.00 0.00 0.00 2.69
187 188 3.233507 ACACTCGTCTGTTTTACCCCTA 58.766 45.455 0.00 0.00 0.00 3.53
188 189 2.044758 ACACTCGTCTGTTTTACCCCT 58.955 47.619 0.00 0.00 0.00 4.79
189 190 2.538512 ACACTCGTCTGTTTTACCCC 57.461 50.000 0.00 0.00 0.00 4.95
190 191 6.158598 TGTATTACACTCGTCTGTTTTACCC 58.841 40.000 0.00 0.00 0.00 3.69
191 192 7.383300 AGTTGTATTACACTCGTCTGTTTTACC 59.617 37.037 0.00 0.00 0.00 2.85
192 193 8.290663 AGTTGTATTACACTCGTCTGTTTTAC 57.709 34.615 0.00 0.00 0.00 2.01
193 194 9.616634 CTAGTTGTATTACACTCGTCTGTTTTA 57.383 33.333 0.00 0.00 0.00 1.52
194 195 7.597743 CCTAGTTGTATTACACTCGTCTGTTTT 59.402 37.037 0.00 0.00 0.00 2.43
195 196 7.088905 CCTAGTTGTATTACACTCGTCTGTTT 58.911 38.462 0.00 0.00 0.00 2.83
196 197 6.349944 CCCTAGTTGTATTACACTCGTCTGTT 60.350 42.308 0.00 0.00 0.00 3.16
197 198 5.125097 CCCTAGTTGTATTACACTCGTCTGT 59.875 44.000 0.00 0.00 0.00 3.41
198 199 5.450137 CCCCTAGTTGTATTACACTCGTCTG 60.450 48.000 0.00 0.00 0.00 3.51
199 200 4.643784 CCCCTAGTTGTATTACACTCGTCT 59.356 45.833 0.00 0.00 0.00 4.18
200 201 4.735873 GCCCCTAGTTGTATTACACTCGTC 60.736 50.000 0.00 0.00 0.00 4.20
201 202 3.131755 GCCCCTAGTTGTATTACACTCGT 59.868 47.826 0.00 0.00 0.00 4.18
202 203 3.131577 TGCCCCTAGTTGTATTACACTCG 59.868 47.826 0.00 0.00 0.00 4.18
203 204 4.748277 TGCCCCTAGTTGTATTACACTC 57.252 45.455 0.00 0.00 0.00 3.51
204 205 6.818281 TTATGCCCCTAGTTGTATTACACT 57.182 37.500 0.00 0.83 0.00 3.55
205 206 7.937394 AGATTTATGCCCCTAGTTGTATTACAC 59.063 37.037 0.00 0.00 0.00 2.90
206 207 8.041143 AGATTTATGCCCCTAGTTGTATTACA 57.959 34.615 0.00 0.00 0.00 2.41
212 213 9.740710 GATAATTAGATTTATGCCCCTAGTTGT 57.259 33.333 0.00 0.00 0.00 3.32
213 214 9.178758 GGATAATTAGATTTATGCCCCTAGTTG 57.821 37.037 0.00 0.00 0.00 3.16
214 215 8.336987 GGGATAATTAGATTTATGCCCCTAGTT 58.663 37.037 4.02 0.00 41.63 2.24
215 216 7.688971 AGGGATAATTAGATTTATGCCCCTAGT 59.311 37.037 10.09 0.00 45.97 2.57
216 217 8.107196 AGGGATAATTAGATTTATGCCCCTAG 57.893 38.462 10.09 0.00 45.97 3.02
217 218 9.582874 TTAGGGATAATTAGATTTATGCCCCTA 57.417 33.333 10.09 0.00 45.97 3.53
218 219 6.995081 AGGGATAATTAGATTTATGCCCCT 57.005 37.500 10.09 0.00 45.97 4.79
219 220 8.336987 AGTTAGGGATAATTAGATTTATGCCCC 58.663 37.037 10.09 0.00 45.97 5.80
238 239 8.730680 GCACATAACCATCATTATTAGTTAGGG 58.269 37.037 0.00 0.00 31.05 3.53
239 240 8.443160 CGCACATAACCATCATTATTAGTTAGG 58.557 37.037 0.00 0.00 32.57 2.69
240 241 8.988934 ACGCACATAACCATCATTATTAGTTAG 58.011 33.333 0.00 0.00 0.00 2.34
241 242 8.896320 ACGCACATAACCATCATTATTAGTTA 57.104 30.769 0.00 0.00 0.00 2.24
242 243 7.801716 ACGCACATAACCATCATTATTAGTT 57.198 32.000 0.00 0.00 0.00 2.24
243 244 7.801716 AACGCACATAACCATCATTATTAGT 57.198 32.000 0.00 0.00 0.00 2.24
244 245 9.759259 CATAACGCACATAACCATCATTATTAG 57.241 33.333 0.00 0.00 0.00 1.73
245 246 8.726068 CCATAACGCACATAACCATCATTATTA 58.274 33.333 0.00 0.00 0.00 0.98
246 247 7.230510 ACCATAACGCACATAACCATCATTATT 59.769 33.333 0.00 0.00 0.00 1.40
247 248 6.714810 ACCATAACGCACATAACCATCATTAT 59.285 34.615 0.00 0.00 0.00 1.28
248 249 6.017523 CACCATAACGCACATAACCATCATTA 60.018 38.462 0.00 0.00 0.00 1.90
249 250 4.887071 ACCATAACGCACATAACCATCATT 59.113 37.500 0.00 0.00 0.00 2.57
250 251 4.275689 CACCATAACGCACATAACCATCAT 59.724 41.667 0.00 0.00 0.00 2.45
251 252 3.625313 CACCATAACGCACATAACCATCA 59.375 43.478 0.00 0.00 0.00 3.07
252 253 3.874543 TCACCATAACGCACATAACCATC 59.125 43.478 0.00 0.00 0.00 3.51
253 254 3.879998 TCACCATAACGCACATAACCAT 58.120 40.909 0.00 0.00 0.00 3.55
254 255 3.336138 TCACCATAACGCACATAACCA 57.664 42.857 0.00 0.00 0.00 3.67
255 256 3.548014 GCATCACCATAACGCACATAACC 60.548 47.826 0.00 0.00 0.00 2.85
256 257 3.064682 TGCATCACCATAACGCACATAAC 59.935 43.478 0.00 0.00 0.00 1.89
257 258 3.274288 TGCATCACCATAACGCACATAA 58.726 40.909 0.00 0.00 0.00 1.90
258 259 2.871633 CTGCATCACCATAACGCACATA 59.128 45.455 0.00 0.00 0.00 2.29
259 260 1.672363 CTGCATCACCATAACGCACAT 59.328 47.619 0.00 0.00 0.00 3.21
260 261 1.085893 CTGCATCACCATAACGCACA 58.914 50.000 0.00 0.00 0.00 4.57
261 262 1.328680 CTCTGCATCACCATAACGCAC 59.671 52.381 0.00 0.00 0.00 5.34
262 263 1.655484 CTCTGCATCACCATAACGCA 58.345 50.000 0.00 0.00 0.00 5.24
263 264 0.940126 CCTCTGCATCACCATAACGC 59.060 55.000 0.00 0.00 0.00 4.84
264 265 0.940126 GCCTCTGCATCACCATAACG 59.060 55.000 0.00 0.00 37.47 3.18
265 266 1.312815 GGCCTCTGCATCACCATAAC 58.687 55.000 0.00 0.00 40.13 1.89
266 267 0.918258 TGGCCTCTGCATCACCATAA 59.082 50.000 3.32 0.00 40.13 1.90
267 268 0.471191 CTGGCCTCTGCATCACCATA 59.529 55.000 3.32 0.00 40.13 2.74
268 269 1.226542 CTGGCCTCTGCATCACCAT 59.773 57.895 3.32 0.00 40.13 3.55
269 270 2.672908 CTGGCCTCTGCATCACCA 59.327 61.111 3.32 0.00 40.13 4.17
270 271 2.124403 CCTGGCCTCTGCATCACC 60.124 66.667 3.32 0.00 40.13 4.02
271 272 1.626356 TACCCTGGCCTCTGCATCAC 61.626 60.000 3.32 0.00 40.13 3.06
272 273 0.913934 TTACCCTGGCCTCTGCATCA 60.914 55.000 3.32 0.00 40.13 3.07
273 274 0.475906 ATTACCCTGGCCTCTGCATC 59.524 55.000 3.32 0.00 40.13 3.91
274 275 0.475906 GATTACCCTGGCCTCTGCAT 59.524 55.000 3.32 0.00 40.13 3.96
275 276 1.635817 GGATTACCCTGGCCTCTGCA 61.636 60.000 3.32 0.00 40.13 4.41
276 277 1.149401 GGATTACCCTGGCCTCTGC 59.851 63.158 3.32 0.00 0.00 4.26
277 278 2.936823 AGGATTACCCTGGCCTCTG 58.063 57.895 3.32 0.00 45.61 3.35
286 287 9.214957 CATTTGTTTTAAAAAGGAGGATTACCC 57.785 33.333 1.31 0.00 36.73 3.69
287 288 9.772973 ACATTTGTTTTAAAAAGGAGGATTACC 57.227 29.630 1.31 0.00 0.00 2.85
291 292 9.492973 CATCACATTTGTTTTAAAAAGGAGGAT 57.507 29.630 1.31 0.00 0.00 3.24
292 293 7.930865 CCATCACATTTGTTTTAAAAAGGAGGA 59.069 33.333 1.31 0.00 0.00 3.71
293 294 7.714813 ACCATCACATTTGTTTTAAAAAGGAGG 59.285 33.333 1.31 0.00 0.00 4.30
294 295 8.661352 ACCATCACATTTGTTTTAAAAAGGAG 57.339 30.769 1.31 0.00 0.00 3.69
295 296 8.887717 CAACCATCACATTTGTTTTAAAAAGGA 58.112 29.630 1.31 0.00 0.00 3.36
296 297 7.643371 GCAACCATCACATTTGTTTTAAAAAGG 59.357 33.333 1.31 0.00 0.00 3.11
297 298 7.372918 CGCAACCATCACATTTGTTTTAAAAAG 59.627 33.333 1.31 0.00 0.00 2.27
298 299 7.182761 CGCAACCATCACATTTGTTTTAAAAA 58.817 30.769 1.31 0.00 0.00 1.94
299 300 6.238211 CCGCAACCATCACATTTGTTTTAAAA 60.238 34.615 0.00 0.00 0.00 1.52
300 301 5.235186 CCGCAACCATCACATTTGTTTTAAA 59.765 36.000 0.00 0.00 0.00 1.52
301 302 4.747108 CCGCAACCATCACATTTGTTTTAA 59.253 37.500 0.00 0.00 0.00 1.52
302 303 4.302455 CCGCAACCATCACATTTGTTTTA 58.698 39.130 0.00 0.00 0.00 1.52
303 304 3.129871 CCGCAACCATCACATTTGTTTT 58.870 40.909 0.00 0.00 0.00 2.43
304 305 2.753296 CCGCAACCATCACATTTGTTT 58.247 42.857 0.00 0.00 0.00 2.83
305 306 1.605202 GCCGCAACCATCACATTTGTT 60.605 47.619 0.00 0.00 0.00 2.83
306 307 0.038343 GCCGCAACCATCACATTTGT 60.038 50.000 0.00 0.00 0.00 2.83
307 308 1.072116 CGCCGCAACCATCACATTTG 61.072 55.000 0.00 0.00 0.00 2.32
308 309 1.212490 CGCCGCAACCATCACATTT 59.788 52.632 0.00 0.00 0.00 2.32
309 310 2.699768 CCGCCGCAACCATCACATT 61.700 57.895 0.00 0.00 0.00 2.71
310 311 3.133464 CCGCCGCAACCATCACAT 61.133 61.111 0.00 0.00 0.00 3.21
311 312 4.634703 ACCGCCGCAACCATCACA 62.635 61.111 0.00 0.00 0.00 3.58
312 313 4.101790 CACCGCCGCAACCATCAC 62.102 66.667 0.00 0.00 0.00 3.06
313 314 3.834013 TTCACCGCCGCAACCATCA 62.834 57.895 0.00 0.00 0.00 3.07
314 315 3.039202 CTTCACCGCCGCAACCATC 62.039 63.158 0.00 0.00 0.00 3.51
315 316 3.055719 CTTCACCGCCGCAACCAT 61.056 61.111 0.00 0.00 0.00 3.55
324 325 0.667184 CACCATTTTGGCTTCACCGC 60.667 55.000 0.00 0.00 42.67 5.68
325 326 0.673437 ACACCATTTTGGCTTCACCG 59.327 50.000 0.00 0.00 42.67 4.94
326 327 1.963515 AGACACCATTTTGGCTTCACC 59.036 47.619 0.00 0.00 42.67 4.02
327 328 3.733443 AAGACACCATTTTGGCTTCAC 57.267 42.857 0.00 0.00 41.29 3.18
328 329 5.860941 TTTAAGACACCATTTTGGCTTCA 57.139 34.783 0.00 0.00 41.29 3.02
329 330 6.454795 TGATTTAAGACACCATTTTGGCTTC 58.545 36.000 0.00 0.00 41.29 3.86
331 332 6.014327 ACATGATTTAAGACACCATTTTGGCT 60.014 34.615 0.00 0.00 42.67 4.75
332 333 6.165577 ACATGATTTAAGACACCATTTTGGC 58.834 36.000 0.00 0.00 42.67 4.52
333 334 9.304731 CATACATGATTTAAGACACCATTTTGG 57.695 33.333 0.00 0.00 45.02 3.28
334 335 8.810427 GCATACATGATTTAAGACACCATTTTG 58.190 33.333 0.00 0.00 0.00 2.44
335 336 7.701924 CGCATACATGATTTAAGACACCATTTT 59.298 33.333 0.00 0.00 0.00 1.82
336 337 7.066887 TCGCATACATGATTTAAGACACCATTT 59.933 33.333 0.00 0.00 0.00 2.32
337 338 6.542005 TCGCATACATGATTTAAGACACCATT 59.458 34.615 0.00 0.00 0.00 3.16
338 339 6.054941 TCGCATACATGATTTAAGACACCAT 58.945 36.000 0.00 0.00 0.00 3.55
339 340 5.423886 TCGCATACATGATTTAAGACACCA 58.576 37.500 0.00 0.00 0.00 4.17
340 341 5.559035 GCTCGCATACATGATTTAAGACACC 60.559 44.000 0.00 0.00 0.00 4.16
341 342 5.435557 GCTCGCATACATGATTTAAGACAC 58.564 41.667 0.00 0.00 0.00 3.67
342 343 4.209080 CGCTCGCATACATGATTTAAGACA 59.791 41.667 0.00 0.00 0.00 3.41
343 344 4.209288 ACGCTCGCATACATGATTTAAGAC 59.791 41.667 0.00 0.00 0.00 3.01
344 345 4.368315 ACGCTCGCATACATGATTTAAGA 58.632 39.130 0.00 0.00 0.00 2.10
345 346 4.445718 AGACGCTCGCATACATGATTTAAG 59.554 41.667 0.00 0.00 0.00 1.85
346 347 4.209080 CAGACGCTCGCATACATGATTTAA 59.791 41.667 0.00 0.00 0.00 1.52
347 348 3.735746 CAGACGCTCGCATACATGATTTA 59.264 43.478 0.00 0.00 0.00 1.40
348 349 2.541346 CAGACGCTCGCATACATGATTT 59.459 45.455 0.00 0.00 0.00 2.17
349 350 2.130395 CAGACGCTCGCATACATGATT 58.870 47.619 0.00 0.00 0.00 2.57
350 351 1.775869 CAGACGCTCGCATACATGAT 58.224 50.000 0.00 0.00 0.00 2.45
351 352 0.871592 GCAGACGCTCGCATACATGA 60.872 55.000 0.00 0.00 34.30 3.07
352 353 1.147557 TGCAGACGCTCGCATACATG 61.148 55.000 0.00 0.00 39.64 3.21
353 354 0.249615 ATGCAGACGCTCGCATACAT 60.250 50.000 4.39 0.00 46.73 2.29
354 355 1.141665 ATGCAGACGCTCGCATACA 59.858 52.632 4.39 0.00 46.73 2.29
355 356 4.018609 ATGCAGACGCTCGCATAC 57.981 55.556 4.39 0.00 46.73 2.39
358 359 1.858458 GTATAAATGCAGACGCTCGCA 59.142 47.619 0.00 0.00 43.45 5.10
359 360 1.858458 TGTATAAATGCAGACGCTCGC 59.142 47.619 0.00 0.00 39.64 5.03
360 361 4.514545 TTTGTATAAATGCAGACGCTCG 57.485 40.909 0.00 0.00 39.64 5.03
376 377 8.072567 GCAAAATGCATGGTTAAAACATTTGTA 58.927 29.630 0.00 0.00 44.26 2.41
377 378 6.916932 GCAAAATGCATGGTTAAAACATTTGT 59.083 30.769 0.00 0.00 44.26 2.83
378 379 7.323046 GCAAAATGCATGGTTAAAACATTTG 57.677 32.000 0.00 4.40 44.26 2.32
394 395 3.391965 TGGTTTGATCACTGCAAAATGC 58.608 40.909 0.00 0.00 45.29 3.56
428 429 0.935196 AGTTTTCAGCACGAACGGTC 59.065 50.000 0.00 0.00 31.73 4.79
448 449 3.672295 CTTGCCCGCCCTGTCTCTC 62.672 68.421 0.00 0.00 0.00 3.20
507 513 0.466124 AGTTCTCCCGGCTGCTTATC 59.534 55.000 0.00 0.00 0.00 1.75
526 532 0.873721 CGGTGTTCATGTGCATGTGA 59.126 50.000 11.38 0.00 39.72 3.58
589 602 1.869767 GAATGCTAATGTCTGGCGGAG 59.130 52.381 0.00 0.00 0.00 4.63
590 603 1.209261 TGAATGCTAATGTCTGGCGGA 59.791 47.619 0.00 0.00 0.00 5.54
591 604 1.667236 TGAATGCTAATGTCTGGCGG 58.333 50.000 0.00 0.00 0.00 6.13
595 608 6.040054 TGGATTGGATTGAATGCTAATGTCTG 59.960 38.462 0.00 0.00 0.00 3.51
606 619 5.906495 TGGATTGGATTGGATTGGATTGAAT 59.094 36.000 0.00 0.00 0.00 2.57
610 623 5.906495 TGATTGGATTGGATTGGATTGGATT 59.094 36.000 0.00 0.00 0.00 3.01
611 624 5.469579 TGATTGGATTGGATTGGATTGGAT 58.530 37.500 0.00 0.00 0.00 3.41
612 625 4.881361 TGATTGGATTGGATTGGATTGGA 58.119 39.130 0.00 0.00 0.00 3.53
613 626 5.305902 TCATGATTGGATTGGATTGGATTGG 59.694 40.000 0.00 0.00 0.00 3.16
614 627 6.413783 TCATGATTGGATTGGATTGGATTG 57.586 37.500 0.00 0.00 0.00 2.67
615 628 6.614087 AGTTCATGATTGGATTGGATTGGATT 59.386 34.615 0.00 0.00 0.00 3.01
616 629 6.141083 AGTTCATGATTGGATTGGATTGGAT 58.859 36.000 0.00 0.00 0.00 3.41
617 630 5.521696 AGTTCATGATTGGATTGGATTGGA 58.478 37.500 0.00 0.00 0.00 3.53
618 631 5.361571 TGAGTTCATGATTGGATTGGATTGG 59.638 40.000 0.00 0.00 0.00 3.16
619 632 6.459670 TGAGTTCATGATTGGATTGGATTG 57.540 37.500 0.00 0.00 0.00 2.67
763 776 5.065218 AGAGGCGTATTGACATTTCATGTTC 59.935 40.000 0.00 0.00 45.03 3.18
820 833 5.459107 GCAACTACGGTACAGTATTCATCAG 59.541 44.000 6.32 0.00 0.00 2.90
904 917 0.318360 TGTACGTCCTGTGTTCTGCG 60.318 55.000 0.00 0.00 0.00 5.18
908 921 3.427863 GCTTAACTGTACGTCCTGTGTTC 59.572 47.826 0.00 0.00 0.00 3.18
913 926 2.993899 CCTTGCTTAACTGTACGTCCTG 59.006 50.000 0.00 0.00 0.00 3.86
914 927 2.895404 TCCTTGCTTAACTGTACGTCCT 59.105 45.455 0.00 0.00 0.00 3.85
915 928 2.991866 GTCCTTGCTTAACTGTACGTCC 59.008 50.000 0.00 0.00 0.00 4.79
916 929 3.645884 TGTCCTTGCTTAACTGTACGTC 58.354 45.455 0.00 0.00 0.00 4.34
918 931 4.092968 GGAATGTCCTTGCTTAACTGTACG 59.907 45.833 0.00 0.00 32.53 3.67
919 932 5.001232 TGGAATGTCCTTGCTTAACTGTAC 58.999 41.667 0.00 0.00 37.46 2.90
920 933 5.235850 TGGAATGTCCTTGCTTAACTGTA 57.764 39.130 0.00 0.00 37.46 2.74
922 935 4.616835 GCTTGGAATGTCCTTGCTTAACTG 60.617 45.833 0.00 0.00 37.46 3.16
924 937 3.255642 TGCTTGGAATGTCCTTGCTTAAC 59.744 43.478 11.32 0.00 37.46 2.01
925 938 3.495331 TGCTTGGAATGTCCTTGCTTAA 58.505 40.909 11.32 0.00 37.46 1.85
926 939 3.084039 CTGCTTGGAATGTCCTTGCTTA 58.916 45.455 11.32 0.00 37.46 3.09
927 940 1.891150 CTGCTTGGAATGTCCTTGCTT 59.109 47.619 11.32 0.00 37.46 3.91
928 941 1.074405 TCTGCTTGGAATGTCCTTGCT 59.926 47.619 11.32 0.00 37.46 3.91
929 942 1.471684 CTCTGCTTGGAATGTCCTTGC 59.528 52.381 0.00 1.18 37.46 4.01
930 943 2.787994 ACTCTGCTTGGAATGTCCTTG 58.212 47.619 0.00 0.00 37.46 3.61
931 944 3.617531 CGTACTCTGCTTGGAATGTCCTT 60.618 47.826 0.00 0.00 37.46 3.36
932 945 2.093973 CGTACTCTGCTTGGAATGTCCT 60.094 50.000 0.00 0.00 37.46 3.85
933 946 2.094182 TCGTACTCTGCTTGGAATGTCC 60.094 50.000 0.00 0.00 36.96 4.02
966 979 1.354337 CCATCGAGCAAGACACGGTG 61.354 60.000 6.58 6.58 42.35 4.94
970 983 1.576356 GATCCCATCGAGCAAGACAC 58.424 55.000 0.00 0.00 0.00 3.67
1146 1162 1.079503 GGCGAAAAAGATGTCGAGCT 58.920 50.000 0.00 0.00 39.64 4.09
1152 1168 6.868339 CCTCTTAAATTTGGCGAAAAAGATGT 59.132 34.615 0.00 0.00 0.00 3.06
1173 1192 4.647564 AGTCACAATCCAAACATCCTCT 57.352 40.909 0.00 0.00 0.00 3.69
1174 1193 5.245531 TGTAGTCACAATCCAAACATCCTC 58.754 41.667 0.00 0.00 0.00 3.71
1175 1194 5.221925 ACTGTAGTCACAATCCAAACATCCT 60.222 40.000 0.00 0.00 33.22 3.24
1176 1195 5.003804 ACTGTAGTCACAATCCAAACATCC 58.996 41.667 0.00 0.00 33.22 3.51
1178 1197 6.530120 TGTACTGTAGTCACAATCCAAACAT 58.470 36.000 0.00 0.00 33.22 2.71
1180 1199 6.128282 CCATGTACTGTAGTCACAATCCAAAC 60.128 42.308 0.00 0.00 33.22 2.93
1181 1200 5.937540 CCATGTACTGTAGTCACAATCCAAA 59.062 40.000 0.00 0.00 33.22 3.28
1182 1201 5.487433 CCATGTACTGTAGTCACAATCCAA 58.513 41.667 0.00 0.00 33.22 3.53
1186 1205 4.826274 AGCCATGTACTGTAGTCACAAT 57.174 40.909 0.00 0.00 33.22 2.71
1187 1206 4.617253 AAGCCATGTACTGTAGTCACAA 57.383 40.909 0.00 0.00 33.22 3.33
1188 1207 5.660460 CATAAGCCATGTACTGTAGTCACA 58.340 41.667 0.00 0.00 0.00 3.58
1189 1208 4.508124 GCATAAGCCATGTACTGTAGTCAC 59.492 45.833 0.00 0.00 36.95 3.67
1190 1209 4.405680 AGCATAAGCCATGTACTGTAGTCA 59.594 41.667 0.00 0.00 43.56 3.41
1191 1210 4.950050 AGCATAAGCCATGTACTGTAGTC 58.050 43.478 0.00 0.00 43.56 2.59
1192 1211 4.202264 GGAGCATAAGCCATGTACTGTAGT 60.202 45.833 0.00 0.00 43.56 2.73
1193 1212 4.039730 AGGAGCATAAGCCATGTACTGTAG 59.960 45.833 0.00 0.00 43.56 2.74
1194 1213 3.967326 AGGAGCATAAGCCATGTACTGTA 59.033 43.478 0.00 0.00 43.56 2.74
1195 1214 2.774234 AGGAGCATAAGCCATGTACTGT 59.226 45.455 0.00 0.00 43.56 3.55
1196 1215 3.482156 AGGAGCATAAGCCATGTACTG 57.518 47.619 0.00 0.00 43.56 2.74
1197 1216 5.555017 CATAAGGAGCATAAGCCATGTACT 58.445 41.667 0.00 0.00 43.56 2.73
1198 1217 4.154918 GCATAAGGAGCATAAGCCATGTAC 59.845 45.833 0.00 0.00 43.56 2.90
1199 1218 4.042062 AGCATAAGGAGCATAAGCCATGTA 59.958 41.667 0.00 0.00 43.56 2.29
1200 1219 3.152341 GCATAAGGAGCATAAGCCATGT 58.848 45.455 0.00 0.00 43.56 3.21
1201 1220 3.190744 CAGCATAAGGAGCATAAGCCATG 59.809 47.826 0.00 0.00 43.56 3.66
1202 1221 3.073503 TCAGCATAAGGAGCATAAGCCAT 59.926 43.478 0.00 0.00 43.56 4.40
1203 1222 2.439135 TCAGCATAAGGAGCATAAGCCA 59.561 45.455 0.00 0.00 43.56 4.75
1204 1223 2.810852 GTCAGCATAAGGAGCATAAGCC 59.189 50.000 0.00 0.00 43.56 4.35
1205 1224 3.470709 TGTCAGCATAAGGAGCATAAGC 58.529 45.455 0.00 0.00 42.56 3.09
1206 1225 4.083431 GCATGTCAGCATAAGGAGCATAAG 60.083 45.833 0.00 0.00 33.30 1.73
1207 1226 3.817084 GCATGTCAGCATAAGGAGCATAA 59.183 43.478 0.00 0.00 33.30 1.90
1208 1227 3.181452 TGCATGTCAGCATAAGGAGCATA 60.181 43.478 0.00 0.00 40.11 3.14
1209 1228 2.228059 GCATGTCAGCATAAGGAGCAT 58.772 47.619 0.00 0.00 33.30 3.79
1210 1229 1.065272 TGCATGTCAGCATAAGGAGCA 60.065 47.619 0.00 0.00 40.11 4.26
1211 1230 1.671979 TGCATGTCAGCATAAGGAGC 58.328 50.000 0.00 0.00 40.11 4.70
1535 1562 2.125269 ACGATGCCGGCCTTGTAC 60.125 61.111 26.77 7.72 40.78 2.90
2016 2054 8.869897 CAGAAACACACTGATAAATACGTACAT 58.130 33.333 0.00 0.00 37.54 2.29
2025 2065 6.545666 ACACAATCCAGAAACACACTGATAAA 59.454 34.615 0.00 0.00 37.54 1.40
2027 2067 5.469760 CACACAATCCAGAAACACACTGATA 59.530 40.000 0.00 0.00 37.54 2.15
2029 2069 3.627123 CACACAATCCAGAAACACACTGA 59.373 43.478 0.00 0.00 37.54 3.41
2034 2074 2.612212 ACGACACACAATCCAGAAACAC 59.388 45.455 0.00 0.00 0.00 3.32
2044 2084 4.071423 TGATCAATGGAACGACACACAAT 58.929 39.130 0.00 0.00 0.00 2.71
2053 2093 5.572211 CCAAATACACTGATCAATGGAACG 58.428 41.667 9.27 0.00 0.00 3.95
2084 2124 2.670905 CTGAACGTGCGTGAATATCCAA 59.329 45.455 0.00 0.00 0.00 3.53
2099 2139 2.034879 ACATTCCTGCGGCTGAACG 61.035 57.895 8.57 3.16 0.00 3.95
2126 2166 5.627135 ACGGAAACATATATACTTTGGGGG 58.373 41.667 0.00 0.00 0.00 5.40
2127 2167 6.531021 AGACGGAAACATATATACTTTGGGG 58.469 40.000 0.00 0.00 0.00 4.96
2318 2377 3.242291 CGCCCATAGGACCTCCCC 61.242 72.222 0.00 0.00 36.42 4.81
2319 2378 2.446036 ACGCCCATAGGACCTCCC 60.446 66.667 0.00 0.00 36.42 4.30
2320 2379 1.623542 AACACGCCCATAGGACCTCC 61.624 60.000 0.00 0.00 33.47 4.30
2321 2380 0.252197 AAACACGCCCATAGGACCTC 59.748 55.000 0.00 0.00 33.47 3.85
2322 2381 0.035439 CAAACACGCCCATAGGACCT 60.035 55.000 0.00 0.00 33.47 3.85
2323 2382 1.029947 CCAAACACGCCCATAGGACC 61.030 60.000 0.00 0.00 33.47 4.46
2324 2383 0.322187 ACCAAACACGCCCATAGGAC 60.322 55.000 0.00 0.00 33.47 3.85
2325 2384 0.402504 AACCAAACACGCCCATAGGA 59.597 50.000 0.00 0.00 33.47 2.94
2326 2385 0.525761 CAACCAAACACGCCCATAGG 59.474 55.000 0.00 0.00 0.00 2.57
2327 2386 0.109319 GCAACCAAACACGCCCATAG 60.109 55.000 0.00 0.00 0.00 2.23
2328 2387 1.528292 GGCAACCAAACACGCCCATA 61.528 55.000 0.00 0.00 38.67 2.74
2329 2388 2.733945 GCAACCAAACACGCCCAT 59.266 55.556 0.00 0.00 0.00 4.00
2330 2389 3.532155 GGCAACCAAACACGCCCA 61.532 61.111 0.00 0.00 38.67 5.36
2709 2769 1.349357 GGTGGTCTTCTTCCTCTGCTT 59.651 52.381 0.00 0.00 0.00 3.91
2811 2871 1.281925 ATTCCCCATTCCCGTCTGCT 61.282 55.000 0.00 0.00 0.00 4.24
2814 2874 2.330216 CTCTATTCCCCATTCCCGTCT 58.670 52.381 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.