>input_sequence_66378
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-------------------------------------------------------ATGGCGGTCATCAAGATGCTCCTGC
TCCCAGCGCTGTTCGCATTGCTGCTCCGGGCAGCATCGGCGGCTCAATGGACGCCCGCCCACGCGACGTTCTACGGCGGC
GGCGACGCGTCCGGCACCATGGGTGAGTCAATTCGGCTCGTAGCTCGACATCTTTTTCGCCAAATTT---AAGAGGATGT
TTGGATTGTGACTACAGTACATGGCTTATGCTCCTTATGCTGACATGCACCCATGCACGG-----ATCTCATCAGGCGGC
GCCTGCGGGTACGGCAACCTGTACGGCGCGGGGTACGGCACGCAGACGACGGCGCTGAGCACCGCCCTCTTCAACAACGG
CGCGTCCTGCGGGGCGTGCTTCACGATCGCGTGCGACACGCGCAAGTCGCGGATGTGCAAGCCGGGGACCTCCATCACCG
TCACGGCCACCAACTTCTGCCCGCCCAACTACGCGCTCGC---CGGCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAG
CACTTCGACATGGCCCAGCCGGCGTGGGAAACCATCGCTGTGTACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAG
GGTGCGCTGCCAGCGGAGCGGCGGGATCAGGTTCACCATCAACGGGCACAGCTACTTCGAGCTGGTGCTGGTGACCAACG
TGGGCGGCAGCGGTGGCGTGGCGCAGATGTGGATCAAGGGCTCCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGC
GCAAACTGGCAGAGCAACGCCAAGCTCGACGGGCAGAGCCTCTCGTTCCGCGTCAAATCCGACGACGGCCGCGTCGTCAC
GGCCAACGACGTCGCGCCGCCCGGGTGGTGGTTCGGCGGCACGTACACGTCCGGGGCTCAGTTGTACTGA----------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr3B_1_TraesCS3B01G199900
TACATACTAAATCAGAAAATGTAAATAAGATACCAAAATGTTTAGAAAAACATCACCTATATGTCAGTGTCATTTGTATT
CATGAAAAAAGTGTTAAAAAAGTTTTCAAACTGTCGGTCAAACGATAAAAGGGCAAAAGCATAGGAGGAGCAAAGTGATT
TGGATAAAACTGGCAACTTTTGAAAATTAGGGGTAAAACAGACGAGTGTAATACAACTAGGGGCATAAATCTAATTATCC
CTAACTAATAATGATGGTTATGTGCGTTATGGTGATGCAGAGGCCAGGGTAATCCTCCTTTTTAAAACAAATGTGATGGT
TGCGGCGGTGAAGCCAAAATGGTGTCTTAAATCATGTATGCGAGCGTCTGCATTTATACAAATGTTTTAACCATGCATTT
TGCAGTGATCAAACCATAGGGGTAACTCGACCGTTCGTGCTGAAAACTGAGA-GACAGGGCGGGCAAGC----TATGACA
TGCTCATCACCTCACAGGTGACTTCATCCGCTGATAAGCAGCCGGGAGAACTCACATG-CACATGAACACCGTTTATCCA
GAATCTC--ATA----TAATAGGCAGCACAAAGTTTTGCTGCTCCGCCAGACATTAGCATTCAATCCAATCCAATCCAAT
CCAATCATGAACTCAACGTGCAGCTGCGCGAAAAGTCAAGAGCAGCCTACCATGCACGCAGCCGAGATACTCGCTTCTCA
AAGAAAACACCGACGCGCTAAGCACGCTCGCTTTCACACTGCAAATCTCCCCTTGGAACATGAAATGTCAATACGCCTCT
CGTGGCCCCGTCAGCCGGTCGGTAGCGACCGACTGATGAATACTGTACCGTAGTTGCAACTCCAGTTGCCTGCACCAAGG
GCAGTATATATATATAGGCGTGCCGGCACATGCTTCCGCAGAACACAGGACGTACAGTTAAGCAAGGACATTCCAAGCAG
AGTACGATCTTGTATTAGCACCGTGTCTTGCTCGATGGGATCGATCAC---CGACATGGCGGTCATCAAGATGCTCCTGC
TCCCAGCGCTGTTCGCATTGCTGCTCCGGGCAGCATCGGCGGCTCAATGGACGCCCGCCCACGCGACGTTCTACGGCGGC
GGCGACGCGTCCGGCACCATGGGTGAGTCAATTCGGCTCGTAGCTCGACATCTTTTTCGCCAAATTT---AAGAGGATGT
TTGGATTGTGACTACAGTACATGGCTTATGCTCCTTATGCTGACATGCACCCATGCACGG-----ATCTCATCAGGCGGC
GCCTGCGGGTACGGCAACCTGTACGGCGCGGGGTACGGCACGCAGACGACGGCGCTGAGCACCGCCCTCTTCAACAACGG
CGCGTCCTGCGGGGCGTGCTTCACGATCGCGTGCGACACGCGCAAGTCGCGGATGTGCAAGCCGGGGACCTCCATCACCG
TCACGGCCACCAACTTCTGCCCGCCCAACTACGCGCTCGC---CGGCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAG
CACTTCGACATGGCCCAGCCGGCGTGGGAAACCATCGCTGTGTACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAG
GGTGCGCTGCCAGCGGAGCGGCGGGATCAGGTTCACCATCAACGGGCACAGCTACTTCGAGCTGGTGCTGGTGACCAACG
TGGGCGGCAGCGGTGGCGTGGCGCAGATGTGGATCAAGGGCTCCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGC
GCAAACTGGCAGAGCAACGCCAAGCTCGACGGGCAGAGCCTCTCGTTCCGCGTCAAATCCGACGACGGCCGCGTCGTCAC
GGCCAACGACGTCGCGCCGCCCGGGTGGTGGTTCGGCGGCACGTACACGTCCGGGGCTCAGTTGTACTGACCC-ATCCAT
GTGCATATCCATGCTGCATGAAACCAAATTTATACGGTATTCGTGTAATCA---CT----GCTTATCGGTGGCCAAATTA
ACCAGACGATCGATCGAGAAGACCACGCCGCCTGCACTGCACGAATGATGTTTATGTACG--TATTTATCAGTGTGTTTC
TGGATTGTGTGTCGTTCCATTGATCAGTGTATTTGGCTACCGGTTGGATATTCACGCACGTTCAGCCGCAGGAATGTGCT
TTTTTCCC--CCAAAGTATATATGTTTCCGTC----TATAAGCTTATTGCATTGTGAGTATCA----------GTTT--T
CTCTCTCTGACTCTCTAGAATCATGTACAAACTAAATAAGAAATGGTTTTGCTGAATCAAACTTGTCTAGATATTTT-CA
GTGTGAAAGTTGACATCCGCCCACGTGTCAGCCCTCTATTGGCGAGCATCCTCCACGGGGAGGTCCTATGGGCGTGTTTG
GTTGCCCGCATGAGGTCCAACCAGGCCCGCGCGGGAAGGATTGGGCCTGTTTGGTAGCCCGCATACATTATTGGGCCTGC
ATCGCACGCTTCTTAAAGCATCTCAGGGCCTGACTCACTGGAAACGCACGAATCGGCAGTTTCTCCAGGGCCAGGCCCGA
GCGGTGCACGTGGGCGGGCGCGGATGCACGCGCGCAGGCACGCTCGAGAAGCCGCGTTGCTTCCTGAAGCACTGGCAGTT
ATTAGCCTCACCGCCCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCAACTCTCACCGGCGGCGGCAGATCGG
AGCAGAGGAAGAAGACCACCGGACACCATCACCGGCGGCGGCGGATCGAAGCAGAGGAAGAAGACCACCGGACTCCATCA
ATGGCGGTAAGCACTTCTCTCTCTTCGACATGAACGCTAGATTCGATCGACGGCGATAGATTCGATCCACAGCAGACGGG
AATGGGGAATAGAGGTAGCTAAGCATAGGGCTAATTCATACTAGTGCATATCAGTTCATA
>chr3A_396
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------CATTT
TGCGGTGATCAAACTACTGGAGTAACTCCACCGTTGGCGCTGAAAACTCACAGGACAGGGCGGGCAAGCTATATATGACA
TGCTCATCACCTCACAGGTGACTTCGTCCGCTCATAAGCAGCCGGGAGAAGGCACATGCCACATGAACACCGGTTATCCG
GAATCTTATATA----TAATAGGCAGCACAAAATTTTGCTC---TGCGATACATTAGCGTTCG----------ATCCAAT
CCAATCATGAACTCAACGTGCAGCTGCGCCAAAAGTCAAGAGCAGCCTACCATGCACGCAGCCGAGATACTCGCTTCTCA
AAGAAAACACCGACGCGCGAAGCACGCTCGCTTTCACACTGCAAATATCCCCTTGCAACATGAAATGTCAATACGCCTCT
CGTGGCCCCGTCAGCCGGTCGGTAGCGACCGAATGATGAATACTGTAGCGTAGTTGCAACTCCAGTTGCTTGCACCAAGG
GCAGTATATATATA--GGCGTGCCGACACATGCTTCTGCACAACAGTTAAGCCAGA----------GACATTGCAAGCAG
GGTACGATCTTGCATCAGTACCA--TCTTGCTCGGCCGGATCGAACGCCGACGACATGGCGGTCATCAAGATGCTCGTGC
TCCCGGCGCTGTGCGCATTGCTGCTCAGAGCAGCGTCGGCGGCTCAATGGACGCCCGCCCACGCGACGTTCTACGGCGGC
GGCGACGCGTCCGGCACCATGGGTGAGTCGATTCGGCTCGTCGCTCGGCATCTTTTCCGCCAAATTTTCTAGTTAGCTCC
ATGG-----------------------------CTTATGCTGACATGCGCCCATGCACGGATCTCATCTCATCAGGCGGC
GCCTGCGGGTACGGCAACCTGTACGGCGCGGGGTACGGCACGCGGACGACGGCGCTGAGCACCGCCCTGTTCAACAACGG
CGCGTCGTGCGGGGCGTGCTTCACGATCGCGTGCGACACGCGCAAGTCGCGGATGTGCAAGCCGGGGGCCTCCATCACCG
TCACGGCCACCAACTTCTGCCCGCCCAACTACGCGCTCGCCGGCGGCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAG
CACTTCGACATGGCCCAGCCGGCGTGGGAGACCATCGCCGTCTACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAG
GGTGCGCTGCCAGCGGAGCGGCGGGATCAGGTTCACCATCAACGGCCACAGCTACTTCGAGCTGGTGCTGGTGACCAACG
TGGGCGGCAGCGGCGGCGTGGCGCAGATGTGGATCAAGGGCTCCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGC
GCAAACTGGCAGAGCAACGCCAACCTCGACGGCCAGAGCCTCTCGTTCCGCGTCAAATCCGACGACGGCCGCGTCGTCAC
GGCCAACGACGTCGCGCCGCCCGGGTGGTGGTTCGGCGGCACGTACACGTCCGGGGCTCAGTTGTACTGACCCGATCCGT
GTGCATATCCATGCTGCATGAAACCAAATTTAAACGGTATTCGTGTAATCA---CCTGCAGCTTATCGGTGGCCAAATTA
ACCAGACGATCGATCGAGAAGACCACGCCGCCTGCACTGCACGAATGATGTTTCTGTACGTATACTGAACAGTATGTTTC
TGGGTTGTGTGTTGTTCCATTGATCAGTGTATTTGGCTACCGGCTGGATATTCACGCATGTTCAGCCGCAGGAATGTGCT
TTTTTTTA---CAAAGTATATATGTTTCTGTCTATATATAAGCTTACTGCATTGTGAGTATCAAAAGCATACTGTTT--T
CTCTCTCTGGCTCTCTAGAATCATGCAAAAAATAAATAAGAAATGGTTTTGCTGAATCAAACTTGTCTAGATATTTTCCA
GTGTGAAAGTTGACATTGGCCCACGTGTCAGCCCTCTATTGGCGAGCATCGTCCAC------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr3D_411
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------AAACCATAGGAGTAACTCCACCGTTCGTGCTGAAAACTCACAGGACAGGACAGGCAAGC----TATGACA
TGCTCATCACCTCACAGGTGACTTCATCCGCTCATAAGCAGCCGGGAGAACGCACATGCCACATGAACGCCGGCTATCCA
GAATCTCATATAGGAGTAATAAACATCACAAAATTTTGCTT---CGCGAGACATTAGCGTTA----------AATCCAAT
CCAATCATGAACTCAACGTGCAGCTGCGCGAAAAGTCAAGAGCAGCCTACCATGCACGCAGCCGAGATACTCGCTTCTCA
AAGAAAACACCGACGCGCGAAGCACGCTCGCTTTCACACTGCAAATCTCCCCTTGCAACATGAACC---------CCTCT
CGTGGCCCCGTCAGCCGGTCGGTAGCGACCGAATGATGAATACTGTAGCGTAGTCACAACTCCAGTTGCTTGCACCAAGG
GCAGTATATATATA--GGCGTGCCGACACATGCTTCTGCACAACAGTTAAGCCAGA----------GACATTCCAAGCAG
AGTACAATCTTGCATTAGTACCA--TCTTGCTCGGTCGGATCGAACGCCGACGACATGGCGGTCATCAAGATGCTCCTGC
TCCCGGCGCTGTGCGCATTGCTGCTCAGGGCAGCATCGGCGGCTCAATGGACGCCCGCTCACGCGACGTTCTACGGCGGC
GACGACGCGTCCGGCACCATGGGTGAGTCAATTCGGCTCGTCGCTCGGCATCTTTTTCGCCAAATTT---AGTTAGCTCC
ATGG-----------------------------CTCATGCTGACATGCACCCATGCACGGGTCTCATCTCATCAGGCGGC
GCCTGCGGGTACGGCAACCTGTACGGCGCGGGGTACGGCACGCAGACGACGGCGCTGAGCACCGCCCTCTTCAACAACGG
CGCGTCGTGCGGGGCGTGCTTCACGATCGCGTGCGACACGCGCAAGTCGCGGATGTGCAAGCCGGGGGCCTCCATCACCG
TCACGGCCACCAACTTCTGCCCGCCCAACTACGCGCTCGCCG---GCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAG
CACTTCGACATGGCCCAGCCGGCATGGGAGACCATCGCCGTCTACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAG
GGTGCGCTGCCAGCGGAGCGGCGGGATCAGGTTCACCATCAACGGCCACAGCTACTTCGAGCTGGTGCTGGTGACCAACG
TGGGCGGCAGCGGCGGCGTGGCGCAGATGTGGATCAAGGGCTCCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGC
GCGAACTGGCAGAGCAACGCCAAGCTCGACGGGCAGAGCCTCTCGTTCCGCCTCAAATCCGACGACGGCCGCGTCGTCAC
GGCCAACGACGTCGCGCCGGCCGGGTGGTGGTTCGGCGGCACGTACACGTCCGGGGCTCAGTTCTACTGACCC-ATCCGT
GTGCATATCCATGCTGCATGAAACCAAATTTAAACGGTATTCGTGTAATCTCACCT----GCTTATCGGTGGCCAAATTA
ACCAGACGATCGATCGAGAAGACCACGCCGCTTGCACTGCACGAATGATGTTTCTGTACG--TACGGAACAGTATGTTTC
TGGGTTGTATGTTGTTCCATTGATCAGTGTATTTGGCTACCGGCTGGATATTCACGCATGTTCAGCCGCAGGAATGTGCT
TTTTTTTTCTCCAAAGTATATATGCTTCCGTC----TATAAGCTTATTGCATTGTGAGTATCAAAAGCATACTGTTTTCT
CTCTCTCTGACTCTCTAGAATCATGCAAAAATTAAATAAGAAATGGTTTTGCTGAATCAAACTTGTCTAGATATTTTTCA
GTGTGAAAGTTGACATCCGCCCACGTGTCAGCCCTCTATTCGAGC-----------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr3B_1250
CAGGTGGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
GCGTGCGGGTACGGGAACTTGTACAATGCTGGGTACGGGGTTAATTCAGCCGCGTTGAGCACGACGCTCTTCAACAACGG
CGCATCATGCGGCATGTGCTTCACTATCACCTGCGACGCTAGCAAGACGCAGTCGTGCAAACAGGGCACGTCCATCACCA
TCACGGCCACCAACTTCTGCCCGCCCAACTACGCCCTGGCCA---GCGACAACGGCGGATGGTGCAACCCGCCGCGGCAG
CACTTCGACATGTCGCAACCCGCGTGGGAGACCATCGCTGTCTACCAAGCCGGCATTGTGCCCGTCAACTAC---AGGAG
AGTTCCCTGCCAGAGGAGTGGGGGCATGAGGTTCACCATTAACGGGAACGACTACTTTGAGCTCGTGACGGTGGCAAATG
TCGCCGGTAGCGGCGTGGTGTCCCAAATGTGGATAAAGGGGTCCAAGACTGACTGGATGGTAATGAGCAGGAACTGGGGT
GCCAGCTGGCAGAGCAATGCTTACCTCAACGGCCAGAGCTTGTCCTTCAAGGTACAGACCGACGACGGCCGGGTCGTCAC
GGCCGACAATGTTGCGCCATACAACTGGTGGTTCGGTGGCACCTACACTTCGTGGCAGCAGTTCTA--------------
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------------------------------------------------------------
>chr3D_1250
CAGGTGGT------------------------------------------------------------------------
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GCGTGCGGGTACGGGAACTTGTACAATGCCGGGTACGGGGTTAATTCGGCTGCGTTGAGCACGGCGCTCTTCAACAACGG
CGCGTCGTGCGGCATGTGCTTCACAATCACCTGCGATGCTAGCAAGACGCAGTCGTGCAAACAGGGCACGTCCATCACCA
TCACGGCCACCAACTTCTGCCCGCCCAACTACGCCCTGGCCA---GCGACAACGGCGGATGGTGCAACCCGCCGCGGCAA
CACTTCGACATGTCGCAACCCGCGTGGGAGACCATCGCCGTCTACCAAGCCGGCATTGTGCCCGTCAACTAC---AGGAG
GGTTCCCTGCCAGAGGAATGGGGGCATGAGGTTCACCGTTAACGGGAACGACTACTTTGAGCTCGTGACGGTGGCAAATG
TCGGCGGTAGCGGCGTGGTGTCCCAAATGTGGATAAAGGGGTCCAAGACTGACTGGATGGTAATGAGCAGGAACTGGGGT
GCCAGCTGGCAGAGCAATGCTTACCTCAACGGCCAGAGCCTTTCCTTCAAGGTACAGACCGACGACGGCCGGGTCGTCAC
GGCCGACAATGTTGCGCCGTACAACTGGTGGTTTGGTGGCACCTACACTTCGTGGCAGCAGTTCTA--------------
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------------------------------------------------------------
>chr5B_1250
CAGGA---------------------------------------------------------------------------
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-----------------------------------------------------------------------------GGC
GCGTGTGGGTACGGCAACCTGTACAACTCGGGGTACGGGATCAACAACGCGGCGCTGAGCACGGCGCTCTTCAATGACGG
CGCCATGTGCGGCGCGTGCTACACCATCTACTGCGACACCGGCCGGAGCAGGATGTGCAAGCCGGGCACCCAGATCACCG
TCTCCGCCACCAACTTCTGCCCGCCCAACTGGGCGCTCCCCA---GCGACAACGGCGGCTGGTGCAACCCGCCGCGCGTG
CACTTCGACATGTCGCAGCCCGCCTGGACCAGCATCGCCATCTACCAGGCCGGCATCGTCCCCGTCGTGTAC---AGGAG
GGTCTCCTGCCAGAAGCGCGACGGCATCCGCTTCGGCATCTCCGGGAGGGACTACTTCGAGCTGGTGGTGATCACCAACG
TCGGCGGCAGCGGGGTCGTGTCCCAGATGTGGATCAAGGGCTCCAACACCAACTGGCTCGCCATGAGCCGCAACTGGGGC
GCCAACTGGCAGAGCAACGCCTACCTCAACGGCCAGAGGCTCTCCTTCAGGGTCAGGCTCGACGACGGCCGCGAGGCCAC
CGCCACCGACGTCGCCCCCTCCAACTGGTGGTTCGGGGCCACCTACACTTCC----------------------------
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------------------------------------------------------------
>chr4A_1250
CAGGA---------------------------------------------------------------------------
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-----------------------------------------------------------------------------GGC
GCGTGTGGGTACGGCAACCTGTACAGCTCCGGGTACGGGATCAACAACGCGGCGCTGAGCACGGCGCTGTTCAACGACGG
CGCCATGTGCGGCGCGTGCTACACCATCTACTGCGACACCGGCAGGAGCAGGATGTGCAAGCCGGGCACCCAGATCACCG
TCTCCGCCACCAACTTCTGCCCGCCCAACTGGGCGCTCCCCA---GCGACAACGGCGGCTGGTGCAACCCGCCGCGGGTG
CACTTCGACATGTCGCAGCCCGCCTGGACCAGCATCGCCATCTACGAGGCCGGCATCGTCCCCGTCGTGTAC---AGGAG
GGTCTCCTGCCAGAAGCGCGACGGCATCCGCTTCGGCATCTCCGGGAGGGACTACTTCGAGCTGGTGGTGGTCACCAACG
TCGGCGGCAGCGGGGTCGTGTCCCAGATGTGGATCAAGGGCTCCAACACCAACTGGCTCGCCATGAGCCGCAACTGGGGC
GCCAACTGGCAGAGCAACGCCTTCCTCAACGGCCAGAGGCTCTCCTTCAGGGTCAGGCTCGACGACGGCCGCGAGGCCAC
CGCCAGCGACGTCGCGCCCTCCAACTGGTGGTTCGGGGCCACCTACACTTCCTGGGTCA---------------------
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------------------------------------------------------------
>chr3A_1258
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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GCGTGCGGGTACGGAAACTTGTACAACGCCGGGTACGGGGTCAATTCAGCCGCGTTGAGCACGGCGCTCTTCAACAACGG
CGCATCGTGCGGCATGTGCTTCACCATCACCTGCGACGCAAGCAAGACGCCGTCGTGCAAACAGGGCACGTCCATCACCA
TCACGGCAACCAACTTCTGCCCGCCCAACTACGCCCTGGCCA---GCGACAACGGCGGATGGTGCAACCCGCCGCGGCAG
CACTTCGACATGTCGCAGCCCGTGTGGGAGACCATCGCCGTCTATCAAGCCGGCATTGTGCCCGTCAACTAC---AGGAG
GGTTCCCTGCCAAAGGAGTGGGGGCATGAGGTTCACCATCAACGGGAACGACTACTTTGAGCTCGTGACGGTGGCAAATG
TCGGCGGTAGCGGCGTGGTGTCCCAAATGTGGATCAAGGGGTCCAAAACTGACTGGATGGTAATGAGCAGGAACTGGGGT
GCTAGCTGGCAGAGCAATGCCTACCTCAACGGCCAGAGTATATCCTTCAGGGTACAGACCGACGACGGACGGGTCATCAC
GGCCGACAATGTTGCGCCGTACAACTGGTGGTTCGGTGGCACCTACAC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------
>chr3D_1261
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---TGCGGTTACGGCAACCTGTACGACGCCGGGTACGGGACCAGCTCGACGGCGCTGAGCACGACGCTGTACGGCGACGG
CAAGTCGTGCGGCGCGTGCTACGTCATCACCTGCGACGCCTACCACACGCAGTCGTGCAAGCCGGGGACGTCCATCACCG
TCACGGCCACCAACTTCTGCCCGCCCAACTGGTCGCAGCCAA---GCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAG
CACTTCGACATGTCCCAGCCCGCCTGGGAGACCATCGCCGACTACCAGGCCGGCTTCGTGCCCATCAAGTACGCCAGGAC
GGCGTGCCCGCGGAGGAACGGCGGCATCCGCTTCTCCATCACCGGCCATGACTACTTCGATCTGGTCCTCATCAGCAACG
TCGGCGGAAGCGGCGCCGTGTCGGCGGCGTGGGTGAAGGGCTCCAACACGGACTGGCTGCCCATGAGCCGCAACTGGGGC
TCTAACTGGCAGAGCAACGGCTACCTCACCGGCCAGAGCCTGTCGTTCCAGGTGCAGACGGACGACGGCAGGTCCGTCAC
GGCGTACAACGTGGCGCCGGCATACTGGAAGTTCGGCGACACTTACACGTC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr3D_1309
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------GCGTTGAGCACGGCGCTCTTCAACAACGG
CGCGTCGTGCGGCATGTGCTTCACCATCACATGTGACGCAAGCAAGACACAATCGTGTAAACAGGGCACGTCCATCACCA
TCACGGCCACCAACTTCTGCCCGCCCAACTACGCCCTGGCCA---GCGACAACGGTGGATGGTGCAACCTGCCGCGGCAG
CACTTTGACATGTCGCAGCCCGCGTGGGAAACCATCGCCGTCTACCAAGCCGGCATTGTGCCCGTCAACTAC---AGGAG
GGTTCCATGCCAGAGGAGTGGGGGCATGAGGTTCACCATCAACGGGAACGACTACTTTGAGCTCGTGACGGTGGCAAATG
TCGGCGGCAGCGGCGTGGTGTCCCAAATGTGGATCAAGGGGTCCAAGACTGACTGGATGGTAATGAGCAGGAACTGGGGT
GCCAGCTGGCAGAGCAATGCTTACCTCAACGGCCAGAGCCTTTCCTTCAAGGTACAGACCGACGACGGCCGGGTCGTCAT
GGCCGACAATGTTGCGCCGTACAACTGGTGGTTCGGTGGCACCTACACTTCGTGGCAGCAGTTCTA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr7B_2328
CTAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCCGCATAAGATCCAACCAGGCCCGCGCGTGAAGGATTCGGCCTGTTTGGTAGCCTGCATACATTATTGGGCCTAC
ATCGCATGCTTCTTAAAGCATCTCAGGGCCTGGCTCACTGAAAACGCACGAATCGGCAGTTTCTCTAGGGACAGGCCCGA
GCGGTGCACGTGGGCGGGCGCGGCTGCACGCGCGCGGCCACGCTCGAGAAGCCGCGTTGCTTCCCGAAGCACCGGCAGTT
ATTAGCCTCACCGCCCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTTCCAACTCTCACCGGCGGCGGCGGATTGG
AACAGAGGAAGAAGACCACCGGACTCCATCACCAGCGACGGCGGATCAGAGCAGAGGAAGAAGACCACCAGACTCCATCA
ATGGTGGTAAGCACTTCTCTCTCTTCGACATGAACACTTGATTCGATCCACGGCGATAGATTTGATCCACGGCGGACGAG
AATGGGGAACAGAGGTAGCTAAGCATAGGGGTAATTCATACTAGTTCATAGCAGTTCATA
>chr6B_2329
-TAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCCGCATGAGGTCCAACCAAGCCCGCGCGAGAAGTATTCGACATGTTTGGTAGCCTGCATACACTATTGGGCCTGC
ATCGCATGCTTCTTAAAGCACCTTAGGGCTTGGCTCACTGGAAACGCACGAATCGGCAGTTTCTCCATGGCCAGGCCCGA
GCGGTGCATGTGGGCGGGCGCGGCTGCACGCGCGCGGCTACGCTCGAGAAGTTGCGTTGCTTCCTGAAGCACCAACAGTT
ATTAGCCTCACCGCCCCTC-ACCGCTCCCTTTCCCCACTCTTCCCCACTCTCCCAACTCTCATCGGCGGCGGCGGATCGG
AGCAGAGGAAGAAGACCACCAGACTCCATCACCGGCGGCGACAGATCGGAGCAGAGGAAGAAGACCACCGGACTCCATCA
ATGGCGGTAAGCACTTCTCTCTCTTCGACATGAACGGTAGATTCGATCCACGGTGATAGATTCGATCCACGGCGGACGGG
AATGGGGAATAGAGGTAGCTAAGCATAGGGGTAATTCATACTAGTGCATAGTAGTTCATA
>chr2B_2329
-TAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCCGCATAAGGTCCAACCAGGCCCGCGCGGGAAGGATTCGGCCTGTTTGGTAGCCCGCATACACTATTGGGTCTGC
ATCGCACGCTTCTTAAAGCACCTCAGGGCCTGGCTCACTGAGAACGCACGAATCGGCAGTTTCTCCAGGGCCAGGCCCGA
GCGGTGCACGTGGGCGGGCGCGGCTGCACGCGCGCGGCCATGCTCGATAAGCCGCGTTGCTTCCCGAAGCACCGGCAATT
ATTAGCCTCACCG-CCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCAACTCTCACCGGCGGCGGCGGATCAG
AGCAGAGGAAGAAGACCACCAGACTCCATCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCATCA
ATGGCAGTAAGCACTTCTCTCTCTTCGACATGAACGCTTGATTCGATCCACGGCAATAGATTCGATACACGGCGGACGGG
AATGGGGAATAGAGGTAGCTAAGCATAGGGGTAATTCATACTAGTTCATAGCAGTTCATA
>chr1B_2329
-TAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCCGCATAAGTTCCAACCAGGCCCGCGCGGAAAGGATTCGGCCTGTTTGGTAGCCCACATACACTATTGGGTCTGC
ATCGCACGCTTCTTAAAGCATCTCAGGGCCTGGCTCACTGGAAACGCACGAATCGGCGGTTTCTCCAGGGCCAGGCCCGA
GCGGTGCACGTGGGCAGGCGCGGCTGCACGCGCGCGGCCACGCTCGAGAAGCCGCGTTGCTTCCCGAAGCACCGACAGTT
ATTAGCCTCACCG-CCCCTAACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCAACTCTCATCGGCGGTGGCGGATCGG
AGCAGAGGAAGAAGACCACCGGACTCCATCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCATCA
ATGGCGCTAAGCACTTCTCTCTCTTCGACATGAACGCTTGATTCGATCCACGGCGATAGATTTGATCCACGGCGGACGGG
AATGGGGAATAGAGGTAGCTAGTTCATAGGGTAATTCATATTAGTTCATAGCAGTTCATA
>chr3B_2332
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---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCTGTGTGAGGTCCAACCAGGCCCGCGCGGAAAGGATTCGGCCTGTTTGGTAGCCTGCATACACTATTGGGCCTTC
ATCACACGCTTCTTAAAGCACCTCGGGGCCTGGCTCACTGGAAACGCACGAATCGGCAGTTTCTCCAGGGTCAGGCCCGA
GCGGTGCACGTGGGCGGGCGCGGCTGCATGCGCGCGGCCACGCTCGAGAAGCCGCGTTGCTTCCCGAAGCACCGGCGGTT
ATTAGCCTCACCGCCCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCCACTCTCATCGGCGGCGGCGGATCGG
AGCAGAGGAAGAA-ACCACCGGACTCCATCACCGGTGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCC-CA
ATGGCGGTAAGCACTTCTCTCTCTTCCACATGAACGCTAAATTCGATCCACGGCGATAGATTCGATCCACGGCGGACGGG
AATGGGGAATAGAGGAAGCTAAGCATAGGGGTAAATCATACTAGTTCATAGCAGTTCATA
>chr6B_2332
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---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCCGCATAAGGTCCAACCAGGCCCGCACGGGAAGGATTCGGCCTGTTTGGTAGCCCGCATACATTATTGGGTCTGC
ATCGCACGCTTCTTAAAGCATCTCAAGGCATGACTCACTGGAAACGCACGAATCGGCAGTTTCTCCAGGGCCAGGCCCGA
GCGGTGCACGTGGGCGGGCGCGGTCGAACGCGCGCGGCCACGCTCGAGAAGCCGCGTTGCTTCCCGAAGCACCGACAGTT
ATTAGCCTCACTGCCCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCAACTCTCACCGGCGGCGGTGGATCGG
AGCAGAGGAAGAAGACCACCGGACTCCATCACCGGCGGCGGCGGATCGGAGCAGAGGAGGAAGACCACCGGACTCCATCA
ATGGCGGTAAGCACTTCTCTCTCTTCGACATGAACGCTTTATTCGATCCACGGTGATAGATTCGATCCACGGCGGACGGG
AATGGGGAATAGAGGTAGCTAAGCATAGGGGTAATTCATACTAGTTCATAGCAGTTCATA
>chr1D_2332
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---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCTGTGTGAGGTCCAACCAGGCCCGCGCGGGAAGGATTCGGCCTGTTTGGTAGCCCGCATACACTATTGGGCCTGC
ATCGCACGCTTCTTAAAGCACATCAGGGCCTGGCTCACTGGGAACGCACGAATCGGCAGTTTCTCCAGGGCCAGGCCCGA
GCGGTGCACGTGGGCGGGTGTGGCTGCACGCGCGCGGCCACGCTCGAGAAGCCGCGTTGCTTCCCGAAGCATCGACAGTT
ATTAGCCTCACCGCCCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCAACTCTCACCGGCGGCGGCGGATCGG
AGCAGAGGAAGAAGACCACCGGGCTCCATCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCC-CA
ATGGCGGTAAGCACTTCTCTCTCTTCGACATGAACGCTAGATTCGATCCACGGCGATAGATTCGATCCACGGCGGACGGG
AATGGGGAATAGAGGTAGCTAAGCATAGGGGTAAATCATACTAGTTCATAGCAGTTCATA
>chr5B_2332
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---------------------------------------------------------------------GGGCGTATTTG
GTTGCCTGTGTGAGGTCCAACCAGGCCCGCGCGGGAAGGATTCGGCCTGTTTGGTAGCCCGCATACACTATTGGGCCTGC
ATCGCATGCTTCTTAAAGCACCTCAAGGCCTGGCTCACTGGGAACGCATGAATCGGCAGTTTCTCCAGGGCCAGGCCCGA
GCAGTGCACGTGGGCGGGCGCGGCTGCACGCGCGCGGCCACGCTCGAGAAGCCGCGTTGCTTCCCGAAGCACCGGCAGTT
ATTAGCCTCACCGCCCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCAACTCTCACCGGTGGCGGCGGATTGG
AGCAGAGGAAGAAGACCACCGGACTCCATCACCGGCGGCGGCGGATCAGAGCAGAGGAAGAAGACCACCGGACTCCC-CA
ATGGCGGTAAGCACTTCTCTCTCTTCAACATGAACGCTAGATTCGATCCACGGCGATAGATTCGATCCACGGCGGACGGG
AATGGGGAATAGAGGTAGCTAAGCATAGGGGTAAATCATACTAGTTCATAGCAGTTCATA
>chr5D_2332
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---------------------------------------------------------------------GGGCGTGTTTG
GTTGCCTGCACAGGCCTCGACCAGGCCCGCGCGGGAAGTATCCAGCCTGTTTGGTAGCCCGCATACACTATTGGGCCTGC
ATCGCACGCTTCTTAAAGCACCTCTGGGCCTGGCTCACTGGGAACGCACGAATCGGCAGTTTCTCCAGGGCCAGGCCCGA
GCGGTGCACGTGGGCGGCGGCGGCTGCACACGCGCGGCCACGCTTGAGAAGCCGCGTTGCTTCCCGAAGCGCCAGCAGTT
ATTAGCCTCACCGCCCCTC-ACCGCTCCCTCTCCCCACTCTTCCCCACTCTCCCAACTCTCACCGGCGGCGGCAGATCGG
AGCAGAGGAAGAAGACCACCGGACTCCATCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCATCA
ATGGCGGTAAGCACTTCTCTCTCTTCGACATGCACGCTAGAATCGATCCACGGCGATAGATTCGGTCCACGGCGGAGGGG
AATGGGGAATAGAGGTAGATAAGCATAGGGGTAGTTCATACTAGTTCATAGCAGTTCATA
>SNPs
S-S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---S----------------S-------S-------------------S-S-----------------------------
--------------------------------S------------------S--------------------S-------
--------------------------------S-------SSSS---S----------S---SSSSSSSSSS--------
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------------------S------------------------------------S------------------------
--------------------------------S--------------S---------------------S----------
--------------SS---------S----------S---S----SSSS-SSS-S-SSSSSSSSSS--------------
------------S-----S---SSS---------S-S-------S-S---------------------------------
----S-------S-------------S-----------------------------------------------------
-----------------------------------------S-----S-----------------------SSSS-S-SS
S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------
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------S-------------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
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-------------S------------------------------------------------------------------
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------------------------------------------------------------------------------S-
--------------------------------S-----------------------------------------------
-----------------------------------------------------S----------S-S-S----S------
---S--------S------------------------------S--------------S---------------------
-----SSS------------------------------------------------------------------------
-------------------------S-S---S------------------------------------------------
--------------------------------------------------S-----SSSSSSSSSSSSS-----------
------------------------------------------S-------------------------------------
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-----------------------S-----------S-S----------------------------------S-------
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------------------------S-----------------------S-------------------------------
------------------------------------------------S---------------------S--S------
------------------------------S-------------------S---------
>forward_513
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-------------ACAGGTGACTTCATCCGCTG-----------------------------------------------
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>reverse_2381
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------------------------------------------------------------AGGTCCTATGGGCGTGTTTG
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