Multiple sequence alignment - TraesCS3B01G174800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G174800 chr3B 100.000 3114 0 0 1 3114 176632378 176635491 0.000000e+00 5751.0
1 TraesCS3B01G174800 chr3B 97.617 1007 20 1 2112 3114 176781348 176782354 0.000000e+00 1724.0
2 TraesCS3B01G174800 chr3B 82.004 1417 211 27 234 1619 779194269 779195672 0.000000e+00 1164.0
3 TraesCS3B01G174800 chr3B 96.928 293 7 2 1778 2068 176781047 176781339 1.000000e-134 490.0
4 TraesCS3B01G174800 chr3B 87.708 301 28 4 2803 3097 176858517 176858814 2.970000e-90 342.0
5 TraesCS3B01G174800 chr3B 87.708 301 28 4 2803 3097 176878268 176878565 2.970000e-90 342.0
6 TraesCS3B01G174800 chr3B 96.429 168 6 0 57 224 120616912 120617079 8.510000e-71 278.0
7 TraesCS3B01G174800 chr3B 97.368 114 3 0 1613 1726 15806512 15806625 8.810000e-46 195.0
8 TraesCS3B01G174800 chr3B 97.391 115 2 1 1611 1725 235920046 235920159 8.810000e-46 195.0
9 TraesCS3B01G174800 chr3B 86.131 137 11 6 1937 2067 176857486 176857620 1.160000e-29 141.0
10 TraesCS3B01G174800 chr3B 86.131 137 11 6 1937 2067 176877237 176877371 1.160000e-29 141.0
11 TraesCS3B01G174800 chr3B 96.154 52 2 0 2060 2111 828918451 828918502 5.530000e-13 86.1
12 TraesCS3B01G174800 chr3B 96.078 51 1 1 2059 2109 581966221 581966270 7.160000e-12 82.4
13 TraesCS3B01G174800 chr3A 79.414 1399 248 29 250 1620 1898113 1896727 0.000000e+00 952.0
14 TraesCS3B01G174800 chr3A 93.012 415 28 1 1184 1597 131073866 131074280 3.440000e-169 604.0
15 TraesCS3B01G174800 chr3A 95.965 347 14 0 1722 2068 131074329 131074675 5.830000e-157 564.0
16 TraesCS3B01G174800 chr3A 86.220 508 37 18 2611 3114 131076591 131077069 1.280000e-143 520.0
17 TraesCS3B01G174800 chr3A 91.030 301 21 1 2803 3097 131416901 131416601 4.840000e-108 401.0
18 TraesCS3B01G174800 chr3A 86.957 115 8 1 2409 2516 131074866 131074980 4.220000e-24 122.0
19 TraesCS3B01G174800 chr3A 97.917 48 0 1 2061 2108 662336061 662336107 7.160000e-12 82.4
20 TraesCS3B01G174800 chr3A 93.750 48 3 0 2155 2202 131074712 131074759 4.310000e-09 73.1
21 TraesCS3B01G174800 chr3D 81.043 1208 200 15 440 1620 582232302 582231097 0.000000e+00 935.0
22 TraesCS3B01G174800 chr3D 92.344 209 16 0 2889 3097 123565529 123565737 6.530000e-77 298.0
23 TraesCS3B01G174800 chr3D 96.988 166 5 0 57 222 250043997 250044162 2.360000e-71 279.0
24 TraesCS3B01G174800 chr3D 85.294 102 9 5 1972 2067 123541362 123541463 1.980000e-17 100.0
25 TraesCS3B01G174800 chr5B 84.460 843 128 3 777 1618 694154792 694153952 0.000000e+00 828.0
26 TraesCS3B01G174800 chr5B 78.620 884 148 24 746 1620 672820781 672821632 5.870000e-152 547.0
27 TraesCS3B01G174800 chr5B 99.091 110 1 0 1617 1726 603798364 603798255 6.810000e-47 198.0
28 TraesCS3B01G174800 chr5B 97.391 115 3 0 1612 1726 512985328 512985214 2.450000e-46 196.0
29 TraesCS3B01G174800 chr5B 91.379 58 3 2 2053 2109 606308213 606308269 9.260000e-11 78.7
30 TraesCS3B01G174800 chr4A 84.229 856 124 7 766 1618 613400020 613399173 0.000000e+00 822.0
31 TraesCS3B01G174800 chr4A 92.913 127 6 3 1617 1742 515780999 515781123 6.860000e-42 182.0
32 TraesCS3B01G174800 chr7A 83.400 747 117 6 877 1620 11434159 11434901 0.000000e+00 686.0
33 TraesCS3B01G174800 chr7A 88.083 193 21 2 1722 1913 81004213 81004404 8.690000e-56 228.0
34 TraesCS3B01G174800 chr7A 85.567 194 24 3 1722 1913 11434898 11435089 1.890000e-47 200.0
35 TraesCS3B01G174800 chrUn 83.266 747 118 6 877 1620 366703465 366704207 0.000000e+00 680.0
36 TraesCS3B01G174800 chrUn 86.082 194 23 3 1722 1913 89690942 89691133 4.070000e-49 206.0
37 TraesCS3B01G174800 chr6D 81.921 354 53 7 1722 2064 36782742 36783095 3.930000e-74 289.0
38 TraesCS3B01G174800 chr6D 94.340 53 1 2 2059 2111 459191788 459191738 2.570000e-11 80.5
39 TraesCS3B01G174800 chr6B 81.972 355 51 9 1722 2064 85710690 85711043 3.930000e-74 289.0
40 TraesCS3B01G174800 chr6A 97.024 168 5 0 58 225 105042075 105041908 1.830000e-72 283.0
41 TraesCS3B01G174800 chr4D 96.429 168 6 0 57 224 238640330 238640163 8.510000e-71 278.0
42 TraesCS3B01G174800 chr4D 94.857 175 9 0 56 230 46028703 46028529 1.100000e-69 274.0
43 TraesCS3B01G174800 chr4D 96.610 118 2 2 1608 1725 57472580 57472695 8.810000e-46 195.0
44 TraesCS3B01G174800 chr4D 88.060 67 7 1 2043 2108 129128904 129128838 9.260000e-11 78.7
45 TraesCS3B01G174800 chr4B 95.906 171 7 0 54 224 389466947 389466777 8.510000e-71 278.0
46 TraesCS3B01G174800 chr4B 94.886 176 7 2 57 231 80990814 80990640 1.100000e-69 274.0
47 TraesCS3B01G174800 chr5A 95.882 170 7 0 53 222 290391692 290391861 3.060000e-70 276.0
48 TraesCS3B01G174800 chr1D 94.022 184 7 4 46 225 444346346 444346163 3.060000e-70 276.0
49 TraesCS3B01G174800 chr7D 89.529 191 20 0 1722 1912 77183161 77183351 3.100000e-60 243.0
50 TraesCS3B01G174800 chr2B 97.368 114 3 0 1615 1728 755992027 755991914 8.810000e-46 195.0
51 TraesCS3B01G174800 chr1A 96.610 118 3 1 1613 1730 587607414 587607298 8.810000e-46 195.0
52 TraesCS3B01G174800 chr1A 96.610 118 3 1 1613 1730 587610296 587610180 8.810000e-46 195.0
53 TraesCS3B01G174800 chr1B 100.000 45 0 0 2065 2109 599230983 599230939 1.990000e-12 84.2
54 TraesCS3B01G174800 chr1B 94.231 52 1 2 2059 2109 633109397 633109447 9.260000e-11 78.7
55 TraesCS3B01G174800 chr2D 97.826 46 1 0 2066 2111 293913186 293913141 2.570000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G174800 chr3B 176632378 176635491 3113 False 5751.00 5751 100.0000 1 3114 1 chr3B.!!$F3 3113
1 TraesCS3B01G174800 chr3B 779194269 779195672 1403 False 1164.00 1164 82.0040 234 1619 1 chr3B.!!$F6 1385
2 TraesCS3B01G174800 chr3B 176781047 176782354 1307 False 1107.00 1724 97.2725 1778 3114 2 chr3B.!!$F8 1336
3 TraesCS3B01G174800 chr3B 176857486 176858814 1328 False 241.50 342 86.9195 1937 3097 2 chr3B.!!$F9 1160
4 TraesCS3B01G174800 chr3B 176877237 176878565 1328 False 241.50 342 86.9195 1937 3097 2 chr3B.!!$F10 1160
5 TraesCS3B01G174800 chr3A 1896727 1898113 1386 True 952.00 952 79.4140 250 1620 1 chr3A.!!$R1 1370
6 TraesCS3B01G174800 chr3A 131073866 131077069 3203 False 376.62 604 91.1808 1184 3114 5 chr3A.!!$F2 1930
7 TraesCS3B01G174800 chr3D 582231097 582232302 1205 True 935.00 935 81.0430 440 1620 1 chr3D.!!$R1 1180
8 TraesCS3B01G174800 chr5B 694153952 694154792 840 True 828.00 828 84.4600 777 1618 1 chr5B.!!$R3 841
9 TraesCS3B01G174800 chr5B 672820781 672821632 851 False 547.00 547 78.6200 746 1620 1 chr5B.!!$F2 874
10 TraesCS3B01G174800 chr4A 613399173 613400020 847 True 822.00 822 84.2290 766 1618 1 chr4A.!!$R1 852
11 TraesCS3B01G174800 chr7A 11434159 11435089 930 False 443.00 686 84.4835 877 1913 2 chr7A.!!$F2 1036
12 TraesCS3B01G174800 chrUn 366703465 366704207 742 False 680.00 680 83.2660 877 1620 1 chrUn.!!$F2 743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 708 0.035317 TGGTACTGGAAGCTGCACAG 59.965 55.0 14.59 14.59 37.6 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2323 2746 0.031449 AAACAATGGGAAACACCGCG 59.969 50.0 0.0 0.0 40.11 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.218338 CTTTGACAATATATCCAGAGCAAAGT 57.782 34.615 0.00 0.00 36.57 2.66
26 27 9.330063 CTTTGACAATATATCCAGAGCAAAGTA 57.670 33.333 0.00 0.00 36.57 2.24
27 28 8.893219 TTGACAATATATCCAGAGCAAAGTAG 57.107 34.615 0.00 0.00 0.00 2.57
28 29 8.250143 TGACAATATATCCAGAGCAAAGTAGA 57.750 34.615 0.00 0.00 0.00 2.59
29 30 8.363390 TGACAATATATCCAGAGCAAAGTAGAG 58.637 37.037 0.00 0.00 0.00 2.43
30 31 8.484214 ACAATATATCCAGAGCAAAGTAGAGA 57.516 34.615 0.00 0.00 0.00 3.10
31 32 8.928448 ACAATATATCCAGAGCAAAGTAGAGAA 58.072 33.333 0.00 0.00 0.00 2.87
32 33 9.770097 CAATATATCCAGAGCAAAGTAGAGAAA 57.230 33.333 0.00 0.00 0.00 2.52
36 37 9.692325 ATATCCAGAGCAAAGTAGAGAAATTTT 57.308 29.630 0.00 0.00 0.00 1.82
37 38 7.206981 TCCAGAGCAAAGTAGAGAAATTTTG 57.793 36.000 0.00 0.00 34.51 2.44
38 39 6.207417 TCCAGAGCAAAGTAGAGAAATTTTGG 59.793 38.462 0.00 0.00 32.59 3.28
39 40 6.015940 CCAGAGCAAAGTAGAGAAATTTTGGT 60.016 38.462 0.00 0.77 42.05 3.67
40 41 7.428826 CAGAGCAAAGTAGAGAAATTTTGGTT 58.571 34.615 0.00 0.00 40.20 3.67
41 42 7.592903 CAGAGCAAAGTAGAGAAATTTTGGTTC 59.407 37.037 0.00 0.00 40.20 3.62
42 43 6.438763 AGCAAAGTAGAGAAATTTTGGTTCG 58.561 36.000 0.00 0.00 37.83 3.95
43 44 5.629435 GCAAAGTAGAGAAATTTTGGTTCGG 59.371 40.000 0.00 0.00 32.59 4.30
44 45 5.372547 AAGTAGAGAAATTTTGGTTCGGC 57.627 39.130 0.00 0.00 0.00 5.54
45 46 4.652822 AGTAGAGAAATTTTGGTTCGGCT 58.347 39.130 0.00 0.00 0.00 5.52
46 47 5.070685 AGTAGAGAAATTTTGGTTCGGCTT 58.929 37.500 0.00 0.00 0.00 4.35
47 48 6.235664 AGTAGAGAAATTTTGGTTCGGCTTA 58.764 36.000 0.00 0.00 0.00 3.09
48 49 6.884836 AGTAGAGAAATTTTGGTTCGGCTTAT 59.115 34.615 0.00 0.00 0.00 1.73
49 50 6.590234 AGAGAAATTTTGGTTCGGCTTATT 57.410 33.333 0.00 0.00 0.00 1.40
50 51 6.621613 AGAGAAATTTTGGTTCGGCTTATTC 58.378 36.000 0.00 0.00 0.00 1.75
51 52 5.720202 AGAAATTTTGGTTCGGCTTATTCC 58.280 37.500 0.00 0.00 0.00 3.01
52 53 5.480422 AGAAATTTTGGTTCGGCTTATTCCT 59.520 36.000 0.00 0.00 0.00 3.36
53 54 4.718940 ATTTTGGTTCGGCTTATTCCTG 57.281 40.909 0.00 0.00 0.00 3.86
54 55 3.426787 TTTGGTTCGGCTTATTCCTGA 57.573 42.857 0.00 0.00 0.00 3.86
55 56 2.396590 TGGTTCGGCTTATTCCTGAC 57.603 50.000 0.00 0.00 0.00 3.51
56 57 1.626321 TGGTTCGGCTTATTCCTGACA 59.374 47.619 0.00 0.00 0.00 3.58
57 58 2.238646 TGGTTCGGCTTATTCCTGACAT 59.761 45.455 0.00 0.00 0.00 3.06
58 59 3.452990 TGGTTCGGCTTATTCCTGACATA 59.547 43.478 0.00 0.00 0.00 2.29
59 60 3.808174 GGTTCGGCTTATTCCTGACATAC 59.192 47.826 0.00 0.00 0.00 2.39
60 61 4.443034 GGTTCGGCTTATTCCTGACATACT 60.443 45.833 0.00 0.00 0.00 2.12
61 62 4.585955 TCGGCTTATTCCTGACATACTC 57.414 45.455 0.00 0.00 0.00 2.59
62 63 3.321111 TCGGCTTATTCCTGACATACTCC 59.679 47.826 0.00 0.00 0.00 3.85
63 64 3.555168 CGGCTTATTCCTGACATACTCCC 60.555 52.174 0.00 0.00 0.00 4.30
64 65 3.648545 GGCTTATTCCTGACATACTCCCT 59.351 47.826 0.00 0.00 0.00 4.20
65 66 4.262678 GGCTTATTCCTGACATACTCCCTC 60.263 50.000 0.00 0.00 0.00 4.30
66 67 4.262678 GCTTATTCCTGACATACTCCCTCC 60.263 50.000 0.00 0.00 0.00 4.30
67 68 1.776662 TTCCTGACATACTCCCTCCG 58.223 55.000 0.00 0.00 0.00 4.63
68 69 0.629596 TCCTGACATACTCCCTCCGT 59.370 55.000 0.00 0.00 0.00 4.69
69 70 1.006758 TCCTGACATACTCCCTCCGTT 59.993 52.381 0.00 0.00 0.00 4.44
70 71 1.409427 CCTGACATACTCCCTCCGTTC 59.591 57.143 0.00 0.00 0.00 3.95
71 72 1.409427 CTGACATACTCCCTCCGTTCC 59.591 57.143 0.00 0.00 0.00 3.62
72 73 1.006758 TGACATACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
73 74 2.242965 TGACATACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
74 75 3.294214 GACATACTCCCTCCGTTCCTAA 58.706 50.000 0.00 0.00 0.00 2.69
75 76 3.703052 GACATACTCCCTCCGTTCCTAAA 59.297 47.826 0.00 0.00 0.00 1.85
76 77 4.296056 ACATACTCCCTCCGTTCCTAAAT 58.704 43.478 0.00 0.00 0.00 1.40
77 78 4.101119 ACATACTCCCTCCGTTCCTAAATG 59.899 45.833 0.00 0.00 0.00 2.32
78 79 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
79 80 2.910977 ACTCCCTCCGTTCCTAAATGTT 59.089 45.455 0.00 0.00 0.00 2.71
80 81 3.329814 ACTCCCTCCGTTCCTAAATGTTT 59.670 43.478 0.00 0.00 0.00 2.83
81 82 3.681593 TCCCTCCGTTCCTAAATGTTTG 58.318 45.455 0.00 0.00 0.00 2.93
82 83 3.073356 TCCCTCCGTTCCTAAATGTTTGT 59.927 43.478 0.00 0.00 0.00 2.83
83 84 3.439129 CCCTCCGTTCCTAAATGTTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
84 85 4.324267 CCTCCGTTCCTAAATGTTTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
85 86 4.760204 CCTCCGTTCCTAAATGTTTGTCTT 59.240 41.667 0.00 0.00 0.00 3.01
86 87 5.240844 CCTCCGTTCCTAAATGTTTGTCTTT 59.759 40.000 0.00 0.00 0.00 2.52
87 88 6.308371 TCCGTTCCTAAATGTTTGTCTTTC 57.692 37.500 0.00 0.00 0.00 2.62
88 89 6.059484 TCCGTTCCTAAATGTTTGTCTTTCT 58.941 36.000 0.00 0.00 0.00 2.52
89 90 7.218614 TCCGTTCCTAAATGTTTGTCTTTCTA 58.781 34.615 0.00 0.00 0.00 2.10
90 91 7.386848 TCCGTTCCTAAATGTTTGTCTTTCTAG 59.613 37.037 0.00 0.00 0.00 2.43
91 92 7.386848 CCGTTCCTAAATGTTTGTCTTTCTAGA 59.613 37.037 0.00 0.00 0.00 2.43
92 93 8.436200 CGTTCCTAAATGTTTGTCTTTCTAGAG 58.564 37.037 0.00 0.00 0.00 2.43
93 94 9.490379 GTTCCTAAATGTTTGTCTTTCTAGAGA 57.510 33.333 0.00 0.00 0.00 3.10
101 102 8.731275 TGTTTGTCTTTCTAGAGATTTCAACA 57.269 30.769 0.00 0.00 0.00 3.33
102 103 9.173021 TGTTTGTCTTTCTAGAGATTTCAACAA 57.827 29.630 0.00 0.00 0.00 2.83
103 104 9.657121 GTTTGTCTTTCTAGAGATTTCAACAAG 57.343 33.333 0.00 0.00 0.00 3.16
104 105 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
105 106 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
106 107 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
107 108 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
108 109 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
109 110 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
110 111 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
111 112 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
112 113 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
115 116 9.376075 AGAGATTTCAACAAGTGACTACATATG 57.624 33.333 0.00 0.00 35.39 1.78
116 117 8.498054 AGATTTCAACAAGTGACTACATATGG 57.502 34.615 7.80 0.00 35.39 2.74
117 118 8.321353 AGATTTCAACAAGTGACTACATATGGA 58.679 33.333 7.80 0.00 35.39 3.41
118 119 7.905604 TTTCAACAAGTGACTACATATGGAG 57.094 36.000 13.77 13.77 35.39 3.86
119 120 5.419542 TCAACAAGTGACTACATATGGAGC 58.580 41.667 15.30 8.47 0.00 4.70
120 121 5.046663 TCAACAAGTGACTACATATGGAGCA 60.047 40.000 15.30 10.95 0.00 4.26
121 122 5.420725 ACAAGTGACTACATATGGAGCAA 57.579 39.130 15.30 0.16 0.00 3.91
122 123 5.804639 ACAAGTGACTACATATGGAGCAAA 58.195 37.500 15.30 0.00 0.00 3.68
123 124 6.237901 ACAAGTGACTACATATGGAGCAAAA 58.762 36.000 15.30 0.00 0.00 2.44
124 125 6.886459 ACAAGTGACTACATATGGAGCAAAAT 59.114 34.615 15.30 0.00 0.00 1.82
125 126 6.932356 AGTGACTACATATGGAGCAAAATG 57.068 37.500 15.30 0.00 0.00 2.32
126 127 6.653020 AGTGACTACATATGGAGCAAAATGA 58.347 36.000 15.30 0.00 0.00 2.57
127 128 6.765036 AGTGACTACATATGGAGCAAAATGAG 59.235 38.462 15.30 0.00 0.00 2.90
128 129 6.540189 GTGACTACATATGGAGCAAAATGAGT 59.460 38.462 15.30 0.00 0.00 3.41
129 130 6.539826 TGACTACATATGGAGCAAAATGAGTG 59.460 38.462 15.30 0.00 0.00 3.51
130 131 6.653020 ACTACATATGGAGCAAAATGAGTGA 58.347 36.000 15.30 0.00 0.00 3.41
131 132 6.765036 ACTACATATGGAGCAAAATGAGTGAG 59.235 38.462 15.30 0.00 0.00 3.51
132 133 5.503927 ACATATGGAGCAAAATGAGTGAGT 58.496 37.500 7.80 0.00 0.00 3.41
133 134 5.587844 ACATATGGAGCAAAATGAGTGAGTC 59.412 40.000 7.80 0.00 0.00 3.36
134 135 3.777106 TGGAGCAAAATGAGTGAGTCT 57.223 42.857 0.00 0.00 0.00 3.24
135 136 4.890158 TGGAGCAAAATGAGTGAGTCTA 57.110 40.909 0.00 0.00 0.00 2.59
136 137 4.569943 TGGAGCAAAATGAGTGAGTCTAC 58.430 43.478 0.00 0.00 0.00 2.59
137 138 4.040339 TGGAGCAAAATGAGTGAGTCTACA 59.960 41.667 0.00 0.00 0.00 2.74
138 139 4.390297 GGAGCAAAATGAGTGAGTCTACAC 59.610 45.833 0.00 0.00 40.60 2.90
162 163 9.900710 CACTCTAAAGTATGTCTATACACATCC 57.099 37.037 0.00 0.00 41.33 3.51
163 164 8.784994 ACTCTAAAGTATGTCTATACACATCCG 58.215 37.037 0.00 0.00 41.33 4.18
164 165 8.687292 TCTAAAGTATGTCTATACACATCCGT 57.313 34.615 0.00 0.00 41.33 4.69
165 166 9.783081 TCTAAAGTATGTCTATACACATCCGTA 57.217 33.333 0.00 0.00 41.33 4.02
177 178 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
178 179 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
179 180 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
180 181 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
181 182 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
182 183 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
183 184 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
184 185 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
185 186 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
186 187 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
187 188 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
188 189 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
189 190 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
190 191 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
191 192 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
192 193 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
193 194 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
194 195 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
198 199 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
199 200 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
217 218 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
218 219 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
219 220 7.521669 AGACAAATATTTAGGAATGGAGGGAG 58.478 38.462 0.00 0.00 0.00 4.30
220 221 7.129504 AGACAAATATTTAGGAATGGAGGGAGT 59.870 37.037 0.00 0.00 0.00 3.85
221 222 8.344939 ACAAATATTTAGGAATGGAGGGAGTA 57.655 34.615 0.00 0.00 0.00 2.59
222 223 8.960064 ACAAATATTTAGGAATGGAGGGAGTAT 58.040 33.333 0.00 0.00 0.00 2.12
237 238 4.993029 GGAGTATATCCCATCTTCTCCG 57.007 50.000 0.00 0.00 43.01 4.63
238 239 3.702045 GGAGTATATCCCATCTTCTCCGG 59.298 52.174 0.00 0.00 43.01 5.14
243 244 1.195115 TCCCATCTTCTCCGGTGAAG 58.805 55.000 31.40 31.40 43.36 3.02
253 254 3.024547 TCTCCGGTGAAGAGTATTCTGG 58.975 50.000 3.14 0.00 32.79 3.86
283 284 0.106819 AGCTGGATGGGAGTTCATGC 60.107 55.000 0.00 0.00 36.26 4.06
297 301 3.132646 AGTTCATGCAGATGGAGACTCTC 59.867 47.826 1.74 0.00 0.00 3.20
300 304 4.540715 TCATGCAGATGGAGACTCTCTTA 58.459 43.478 6.02 0.00 0.00 2.10
303 307 4.285020 TGCAGATGGAGACTCTCTTATGT 58.715 43.478 6.02 0.00 0.00 2.29
309 313 5.060662 TGGAGACTCTCTTATGTTGTTCG 57.939 43.478 6.02 0.00 0.00 3.95
317 321 4.504097 TCTCTTATGTTGTTCGATGATGCG 59.496 41.667 0.00 0.00 0.00 4.73
350 354 8.722480 ATGTATGATTGGATGATAATGGTACG 57.278 34.615 0.00 0.00 0.00 3.67
363 367 1.738099 GGTACGGTCAGTGCTGCTG 60.738 63.158 0.00 3.02 46.34 4.41
379 383 0.977395 GCTGAACTAGGGGACTGTGT 59.023 55.000 0.00 0.00 43.88 3.72
380 384 1.066787 GCTGAACTAGGGGACTGTGTC 60.067 57.143 0.00 0.00 43.88 3.67
386 390 2.158295 ACTAGGGGACTGTGTCTCTGTT 60.158 50.000 0.00 0.00 43.88 3.16
387 391 1.051812 AGGGGACTGTGTCTCTGTTG 58.948 55.000 0.00 0.00 41.13 3.33
390 394 1.541233 GGGACTGTGTCTCTGTTGTGG 60.541 57.143 0.00 0.00 32.47 4.17
391 395 1.139058 GGACTGTGTCTCTGTTGTGGT 59.861 52.381 0.00 0.00 32.47 4.16
392 396 2.474816 GACTGTGTCTCTGTTGTGGTC 58.525 52.381 0.00 0.00 0.00 4.02
394 398 2.159043 ACTGTGTCTCTGTTGTGGTCTG 60.159 50.000 0.00 0.00 0.00 3.51
395 399 1.221414 GTGTCTCTGTTGTGGTCTGC 58.779 55.000 0.00 0.00 0.00 4.26
396 400 1.123077 TGTCTCTGTTGTGGTCTGCT 58.877 50.000 0.00 0.00 0.00 4.24
397 401 1.486310 TGTCTCTGTTGTGGTCTGCTT 59.514 47.619 0.00 0.00 0.00 3.91
398 402 2.139118 GTCTCTGTTGTGGTCTGCTTC 58.861 52.381 0.00 0.00 0.00 3.86
399 403 1.762370 TCTCTGTTGTGGTCTGCTTCA 59.238 47.619 0.00 0.00 0.00 3.02
401 405 0.947244 CTGTTGTGGTCTGCTTCACC 59.053 55.000 0.00 0.00 33.29 4.02
402 406 0.546122 TGTTGTGGTCTGCTTCACCT 59.454 50.000 0.00 0.00 34.66 4.00
403 407 1.765904 TGTTGTGGTCTGCTTCACCTA 59.234 47.619 0.00 0.00 34.66 3.08
405 409 1.717032 TGTGGTCTGCTTCACCTAGT 58.283 50.000 0.00 0.00 34.66 2.57
407 411 1.618837 GTGGTCTGCTTCACCTAGTGA 59.381 52.381 0.00 0.00 41.09 3.41
408 412 1.895798 TGGTCTGCTTCACCTAGTGAG 59.104 52.381 0.00 0.00 43.69 3.51
409 413 1.404851 GGTCTGCTTCACCTAGTGAGC 60.405 57.143 10.35 10.35 43.69 4.26
411 415 2.028567 GTCTGCTTCACCTAGTGAGCTT 60.029 50.000 15.28 0.00 43.69 3.74
413 417 1.970640 TGCTTCACCTAGTGAGCTTGA 59.029 47.619 15.28 0.00 43.69 3.02
414 418 2.289072 TGCTTCACCTAGTGAGCTTGAC 60.289 50.000 15.28 0.00 43.69 3.18
418 422 2.300152 TCACCTAGTGAGCTTGACTTGG 59.700 50.000 19.18 19.18 37.67 3.61
419 423 2.037772 CACCTAGTGAGCTTGACTTGGT 59.962 50.000 20.14 20.14 46.45 3.67
420 424 2.706190 ACCTAGTGAGCTTGACTTGGTT 59.294 45.455 20.14 9.95 44.13 3.67
422 426 2.262423 AGTGAGCTTGACTTGGTTCC 57.738 50.000 0.00 0.00 0.00 3.62
423 427 1.490490 AGTGAGCTTGACTTGGTTCCA 59.510 47.619 0.00 0.00 0.00 3.53
424 428 2.107204 AGTGAGCTTGACTTGGTTCCAT 59.893 45.455 0.00 0.00 0.00 3.41
425 429 2.227388 GTGAGCTTGACTTGGTTCCATG 59.773 50.000 0.00 3.65 0.00 3.66
426 430 1.200948 GAGCTTGACTTGGTTCCATGC 59.799 52.381 4.91 0.00 0.00 4.06
427 431 0.244721 GCTTGACTTGGTTCCATGCC 59.755 55.000 4.91 0.00 0.00 4.40
428 432 0.523072 CTTGACTTGGTTCCATGCCG 59.477 55.000 4.91 0.00 0.00 5.69
429 433 0.179004 TTGACTTGGTTCCATGCCGT 60.179 50.000 4.91 0.00 0.00 5.68
431 435 0.605319 GACTTGGTTCCATGCCGTGA 60.605 55.000 4.91 0.00 0.00 4.35
432 436 0.038166 ACTTGGTTCCATGCCGTGAT 59.962 50.000 4.91 0.00 0.00 3.06
433 437 0.452987 CTTGGTTCCATGCCGTGATG 59.547 55.000 0.00 0.00 0.00 3.07
438 442 0.322366 TTCCATGCCGTGATGCAGAA 60.322 50.000 0.00 0.00 45.93 3.02
468 472 4.158949 TGTGTAATACCATACGACAGCACT 59.841 41.667 0.00 0.00 0.00 4.40
472 476 0.108615 ACCATACGACAGCACTCAGC 60.109 55.000 0.00 0.00 46.19 4.26
516 520 6.283694 TGCTCCACATTGTCTATCTAATGTC 58.716 40.000 0.00 0.00 43.53 3.06
524 528 5.943706 TGTCTATCTAATGTCTCCGCTAC 57.056 43.478 0.00 0.00 0.00 3.58
526 530 5.826208 TGTCTATCTAATGTCTCCGCTACAA 59.174 40.000 0.00 0.00 0.00 2.41
545 549 7.902917 CGCTACAAAAGACGATTATTTTCATCA 59.097 33.333 0.00 0.00 0.00 3.07
546 550 9.214953 GCTACAAAAGACGATTATTTTCATCAG 57.785 33.333 0.00 0.00 0.00 2.90
549 553 9.994432 ACAAAAGACGATTATTTTCATCAGATC 57.006 29.630 0.00 0.00 0.00 2.75
552 556 7.630470 AGACGATTATTTTCATCAGATCGAC 57.370 36.000 10.09 4.58 38.81 4.20
555 559 5.164051 CGATTATTTTCATCAGATCGACGGG 60.164 44.000 0.00 0.00 38.81 5.28
562 569 3.008704 TCATCAGATCGACGGGGTCTATA 59.991 47.826 0.00 0.00 0.00 1.31
563 570 3.497103 TCAGATCGACGGGGTCTATAA 57.503 47.619 0.00 0.00 0.00 0.98
584 591 2.833631 TTTCCAGGAAGTCCTTCGTC 57.166 50.000 1.07 0.00 46.09 4.20
588 595 1.067495 CCAGGAAGTCCTTCGTCAGTC 60.067 57.143 0.00 0.00 46.09 3.51
589 596 1.613925 CAGGAAGTCCTTCGTCAGTCA 59.386 52.381 0.00 0.00 46.09 3.41
594 601 4.261909 GGAAGTCCTTCGTCAGTCAAAGTA 60.262 45.833 1.21 0.00 40.37 2.24
598 605 5.068723 AGTCCTTCGTCAGTCAAAGTAAGAA 59.931 40.000 0.00 0.00 0.00 2.52
616 623 2.103771 AGAAGCAGCAGAGAGTGTGAAA 59.896 45.455 0.00 0.00 0.00 2.69
619 626 1.530293 GCAGCAGAGAGTGTGAAACTG 59.470 52.381 0.00 0.00 40.07 3.16
654 661 4.770795 ACTGTTCCTGTACTTCATATGCC 58.229 43.478 0.00 0.00 0.00 4.40
662 675 6.057533 CCTGTACTTCATATGCCTTCAATGA 58.942 40.000 0.00 0.00 0.00 2.57
680 693 6.000840 TCAATGAAACATGCTTACTGTGGTA 58.999 36.000 0.00 0.00 0.00 3.25
685 698 2.903784 ACATGCTTACTGTGGTACTGGA 59.096 45.455 0.00 0.00 0.00 3.86
695 708 0.035317 TGGTACTGGAAGCTGCACAG 59.965 55.000 14.59 14.59 37.60 3.66
700 719 1.905215 ACTGGAAGCTGCACAGAGTAT 59.095 47.619 20.54 1.52 37.60 2.12
703 722 2.012673 GGAAGCTGCACAGAGTATTGG 58.987 52.381 1.02 0.00 0.00 3.16
706 725 2.430465 AGCTGCACAGAGTATTGGTTG 58.570 47.619 1.02 0.00 0.00 3.77
717 736 3.399330 AGTATTGGTTGTGTCTGGTTCG 58.601 45.455 0.00 0.00 0.00 3.95
722 741 1.804748 GGTTGTGTCTGGTTCGGAATC 59.195 52.381 0.00 0.00 0.00 2.52
743 768 7.487189 GGAATCTCGTTTGTATATACGTATGGG 59.513 40.741 18.37 4.49 38.79 4.00
747 772 8.289618 TCTCGTTTGTATATACGTATGGGTAAC 58.710 37.037 18.37 13.18 38.79 2.50
775 812 8.115490 AGAAAATTCGAACTCCAAGATTGAAT 57.885 30.769 0.00 0.00 33.96 2.57
805 845 2.930826 AACAGTGGTAGGTGTCTTGG 57.069 50.000 0.00 0.00 0.00 3.61
816 856 1.920325 TGTCTTGGCCCTCCTCCTG 60.920 63.158 0.00 0.00 0.00 3.86
831 871 1.002544 CTCCTGGTTGGTCTGGTTCTC 59.997 57.143 0.00 0.00 37.07 2.87
840 880 2.711009 TGGTCTGGTTCTCTTGTGGATT 59.289 45.455 0.00 0.00 0.00 3.01
874 914 7.653767 AAGTTATTCGTTGAAAGACTAGTGG 57.346 36.000 0.00 0.00 0.00 4.00
895 935 2.702592 TTCCAATAGTGGCCTTACGG 57.297 50.000 3.77 1.83 45.54 4.02
903 943 0.896226 GTGGCCTTACGGTCTTCTCT 59.104 55.000 3.32 0.00 35.36 3.10
938 978 9.750125 AATAAAGAAAGCAACGAGAAATTTCTT 57.250 25.926 21.33 4.36 46.65 2.52
981 1021 1.007387 CGGCTGTGTTTTCAAGGGC 60.007 57.895 0.00 0.00 0.00 5.19
987 1027 3.243704 GCTGTGTTTTCAAGGGCACATTA 60.244 43.478 0.00 0.00 40.45 1.90
1016 1062 3.266772 TCCTCTATGGTGGCTGTCAAAAT 59.733 43.478 0.00 0.00 37.07 1.82
1026 1072 5.473039 GTGGCTGTCAAAATGCTAAAAGAT 58.527 37.500 0.00 0.00 0.00 2.40
1038 1084 3.330701 TGCTAAAAGATCTTGGACAGGGT 59.669 43.478 9.17 0.00 0.00 4.34
1047 1093 0.397941 TTGGACAGGGTGAGAAGCAG 59.602 55.000 0.00 0.00 0.00 4.24
1078 1124 1.180029 AGTGCAGACCATTGGAATGC 58.820 50.000 22.00 22.00 37.87 3.56
1134 1180 3.646162 TCTGTGCTGAGGGAAGTAAAAGA 59.354 43.478 0.00 0.00 0.00 2.52
1311 1357 4.342862 ACACTGCGATATAAAGCCAGAT 57.657 40.909 0.00 0.00 0.00 2.90
1335 1381 6.446781 AATGTACTCCTTGATGCAGATTTG 57.553 37.500 0.00 0.00 0.00 2.32
1433 1479 0.671781 GCCATCGGATATCTTGCGCT 60.672 55.000 9.73 0.00 39.30 5.92
1481 1527 6.452242 TCACACATAAGTCTGACGTTTACAT 58.548 36.000 0.75 0.00 0.00 2.29
1608 1684 4.574674 TGAAGGAGATGTTATGTGCCTT 57.425 40.909 0.00 0.00 38.37 4.35
1609 1685 5.692115 TGAAGGAGATGTTATGTGCCTTA 57.308 39.130 0.00 0.00 35.99 2.69
1610 1686 5.428253 TGAAGGAGATGTTATGTGCCTTAC 58.572 41.667 0.00 0.00 35.99 2.34
1611 1687 5.189736 TGAAGGAGATGTTATGTGCCTTACT 59.810 40.000 0.00 0.00 35.99 2.24
1613 1689 4.130118 GGAGATGTTATGTGCCTTACTGG 58.870 47.826 0.00 0.00 39.35 4.00
1614 1690 4.141711 GGAGATGTTATGTGCCTTACTGGA 60.142 45.833 0.00 0.00 38.35 3.86
1615 1691 5.455326 GGAGATGTTATGTGCCTTACTGGAT 60.455 44.000 0.00 0.00 38.35 3.41
1616 1692 6.239600 GGAGATGTTATGTGCCTTACTGGATA 60.240 42.308 0.00 0.00 38.35 2.59
1617 1693 6.763355 AGATGTTATGTGCCTTACTGGATAG 58.237 40.000 0.00 0.00 38.35 2.08
1618 1694 5.950544 TGTTATGTGCCTTACTGGATAGT 57.049 39.130 0.00 0.00 40.99 2.12
1619 1695 7.509318 AGATGTTATGTGCCTTACTGGATAGTA 59.491 37.037 0.00 0.00 38.36 1.82
1620 1696 6.812998 TGTTATGTGCCTTACTGGATAGTAC 58.187 40.000 0.00 0.00 39.06 2.73
1621 1697 6.610020 TGTTATGTGCCTTACTGGATAGTACT 59.390 38.462 0.00 0.00 39.06 2.73
1622 1698 5.793030 ATGTGCCTTACTGGATAGTACTC 57.207 43.478 0.00 0.00 39.06 2.59
1623 1699 3.958798 TGTGCCTTACTGGATAGTACTCC 59.041 47.826 0.00 0.00 39.06 3.85
1624 1700 3.321396 GTGCCTTACTGGATAGTACTCCC 59.679 52.174 0.00 2.67 39.06 4.30
1625 1701 3.206866 TGCCTTACTGGATAGTACTCCCT 59.793 47.826 0.00 0.00 39.06 4.20
1626 1702 3.827876 GCCTTACTGGATAGTACTCCCTC 59.172 52.174 0.00 0.00 39.06 4.30
1627 1703 4.409187 CCTTACTGGATAGTACTCCCTCC 58.591 52.174 0.00 5.38 39.06 4.30
1628 1704 2.660670 ACTGGATAGTACTCCCTCCG 57.339 55.000 0.00 4.41 34.74 4.63
1629 1705 1.851653 ACTGGATAGTACTCCCTCCGT 59.148 52.381 0.00 4.98 34.74 4.69
1630 1706 2.244252 ACTGGATAGTACTCCCTCCGTT 59.756 50.000 0.00 0.00 34.74 4.44
1631 1707 2.885894 CTGGATAGTACTCCCTCCGTTC 59.114 54.545 0.00 0.00 34.12 3.95
1632 1708 2.237643 GGATAGTACTCCCTCCGTTCC 58.762 57.143 0.00 0.00 0.00 3.62
1633 1709 2.423947 GGATAGTACTCCCTCCGTTCCA 60.424 54.545 0.00 0.00 0.00 3.53
1634 1710 2.905415 TAGTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
1635 1711 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
1636 1712 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
1637 1713 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
1638 1714 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
1639 1715 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1640 1716 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1641 1717 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
1642 1718 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
1643 1719 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
1644 1720 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
1645 1721 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
1646 1722 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
1647 1723 2.733026 CCGTTCCAAATTACTCGTCGTT 59.267 45.455 0.00 0.00 0.00 3.85
1648 1724 3.422603 CCGTTCCAAATTACTCGTCGTTG 60.423 47.826 0.00 0.00 0.00 4.10
1649 1725 3.426191 CGTTCCAAATTACTCGTCGTTGA 59.574 43.478 0.00 0.00 0.00 3.18
1650 1726 4.084952 CGTTCCAAATTACTCGTCGTTGAA 60.085 41.667 0.00 0.00 0.00 2.69
1651 1727 5.556758 CGTTCCAAATTACTCGTCGTTGAAA 60.557 40.000 0.00 0.00 0.00 2.69
1652 1728 6.368213 GTTCCAAATTACTCGTCGTTGAAAT 58.632 36.000 0.00 0.00 0.00 2.17
1653 1729 5.922546 TCCAAATTACTCGTCGTTGAAATG 58.077 37.500 0.00 0.00 0.00 2.32
1654 1730 5.086058 CCAAATTACTCGTCGTTGAAATGG 58.914 41.667 0.00 0.00 0.00 3.16
1655 1731 5.106869 CCAAATTACTCGTCGTTGAAATGGA 60.107 40.000 0.00 0.00 0.00 3.41
1656 1732 6.403200 CCAAATTACTCGTCGTTGAAATGGAT 60.403 38.462 0.00 0.00 0.00 3.41
1657 1733 5.718649 ATTACTCGTCGTTGAAATGGATG 57.281 39.130 0.00 0.00 0.00 3.51
1658 1734 3.040147 ACTCGTCGTTGAAATGGATGT 57.960 42.857 0.00 0.00 0.00 3.06
1659 1735 4.182693 ACTCGTCGTTGAAATGGATGTA 57.817 40.909 0.00 0.00 0.00 2.29
1660 1736 4.755411 ACTCGTCGTTGAAATGGATGTAT 58.245 39.130 0.00 0.00 0.00 2.29
1661 1737 4.804139 ACTCGTCGTTGAAATGGATGTATC 59.196 41.667 0.00 0.00 0.00 2.24
1662 1738 5.006153 TCGTCGTTGAAATGGATGTATCT 57.994 39.130 0.00 0.00 0.00 1.98
1663 1739 6.139048 TCGTCGTTGAAATGGATGTATCTA 57.861 37.500 0.00 0.00 0.00 1.98
1664 1740 6.206498 TCGTCGTTGAAATGGATGTATCTAG 58.794 40.000 0.00 0.00 0.00 2.43
1665 1741 6.038936 TCGTCGTTGAAATGGATGTATCTAGA 59.961 38.462 0.00 0.00 0.00 2.43
1666 1742 6.695713 CGTCGTTGAAATGGATGTATCTAGAA 59.304 38.462 0.00 0.00 0.00 2.10
1667 1743 7.306051 CGTCGTTGAAATGGATGTATCTAGAAC 60.306 40.741 0.00 0.00 0.00 3.01
1668 1744 7.707035 GTCGTTGAAATGGATGTATCTAGAACT 59.293 37.037 0.00 0.00 0.00 3.01
1669 1745 8.909923 TCGTTGAAATGGATGTATCTAGAACTA 58.090 33.333 0.00 0.00 0.00 2.24
1670 1746 9.529325 CGTTGAAATGGATGTATCTAGAACTAA 57.471 33.333 0.00 0.00 0.00 2.24
1697 1773 5.955488 ACATCTAGATACATCCATACGTGC 58.045 41.667 4.54 0.00 0.00 5.34
1698 1774 4.680171 TCTAGATACATCCATACGTGCG 57.320 45.455 0.00 0.00 0.00 5.34
1699 1775 4.320870 TCTAGATACATCCATACGTGCGA 58.679 43.478 0.00 0.00 0.00 5.10
1700 1776 3.284323 AGATACATCCATACGTGCGAC 57.716 47.619 0.00 0.00 0.00 5.19
1701 1777 2.621526 AGATACATCCATACGTGCGACA 59.378 45.455 0.00 0.00 0.00 4.35
1702 1778 2.943449 TACATCCATACGTGCGACAA 57.057 45.000 0.00 0.00 0.00 3.18
1703 1779 1.640428 ACATCCATACGTGCGACAAG 58.360 50.000 0.00 0.00 0.00 3.16
1704 1780 1.067142 ACATCCATACGTGCGACAAGT 60.067 47.619 0.00 0.00 0.00 3.16
1705 1781 2.164827 ACATCCATACGTGCGACAAGTA 59.835 45.455 0.00 7.72 33.49 2.24
1706 1782 3.183754 CATCCATACGTGCGACAAGTAA 58.816 45.455 0.00 0.00 32.82 2.24
1707 1783 3.513680 TCCATACGTGCGACAAGTAAT 57.486 42.857 0.00 0.00 32.82 1.89
1708 1784 3.852286 TCCATACGTGCGACAAGTAATT 58.148 40.909 0.00 0.00 32.82 1.40
1709 1785 3.861113 TCCATACGTGCGACAAGTAATTC 59.139 43.478 0.00 0.00 32.82 2.17
1710 1786 3.301579 CCATACGTGCGACAAGTAATTCG 60.302 47.826 0.00 0.00 32.82 3.34
1711 1787 1.065358 ACGTGCGACAAGTAATTCGG 58.935 50.000 0.00 0.00 35.73 4.30
1712 1788 1.336148 ACGTGCGACAAGTAATTCGGA 60.336 47.619 0.00 0.00 35.73 4.55
1713 1789 1.722464 CGTGCGACAAGTAATTCGGAA 59.278 47.619 0.00 0.00 37.32 4.30
1714 1790 2.471749 CGTGCGACAAGTAATTCGGAAC 60.472 50.000 0.00 0.00 37.32 3.62
1738 1814 0.108281 GGAGTAGGTTGGAAGGCGAC 60.108 60.000 0.00 0.00 0.00 5.19
2046 2133 2.110011 ACTTGTCCCTTATTGGCCAAGT 59.890 45.455 24.94 14.17 44.44 3.16
2068 2156 7.100458 AGTTTCTGAACTGCAATTTGTTACT 57.900 32.000 0.00 0.00 44.27 2.24
2069 2157 7.196331 AGTTTCTGAACTGCAATTTGTTACTC 58.804 34.615 0.00 0.00 44.27 2.59
2070 2158 5.689383 TCTGAACTGCAATTTGTTACTCC 57.311 39.130 0.00 0.00 0.00 3.85
2071 2159 4.518970 TCTGAACTGCAATTTGTTACTCCC 59.481 41.667 0.00 0.00 0.00 4.30
2073 2161 4.518970 TGAACTGCAATTTGTTACTCCCTC 59.481 41.667 0.00 0.00 0.00 4.30
2074 2162 3.421844 ACTGCAATTTGTTACTCCCTCC 58.578 45.455 0.00 0.00 0.00 4.30
2075 2163 2.420022 CTGCAATTTGTTACTCCCTCCG 59.580 50.000 0.00 0.00 0.00 4.63
2076 2164 2.224670 TGCAATTTGTTACTCCCTCCGT 60.225 45.455 0.00 0.00 0.00 4.69
2077 2165 2.418976 GCAATTTGTTACTCCCTCCGTC 59.581 50.000 0.00 0.00 0.00 4.79
2078 2166 3.007635 CAATTTGTTACTCCCTCCGTCC 58.992 50.000 0.00 0.00 0.00 4.79
2079 2167 0.604578 TTTGTTACTCCCTCCGTCCG 59.395 55.000 0.00 0.00 0.00 4.79
2080 2168 1.252904 TTGTTACTCCCTCCGTCCGG 61.253 60.000 0.00 0.00 0.00 5.14
2081 2169 1.379044 GTTACTCCCTCCGTCCGGA 60.379 63.158 0.00 0.00 42.90 5.14
2082 2170 0.967380 GTTACTCCCTCCGTCCGGAA 60.967 60.000 5.23 0.00 44.66 4.30
2083 2171 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
2084 2172 0.251742 TACTCCCTCCGTCCGGAAAA 60.252 55.000 5.23 0.00 44.66 2.29
2085 2173 1.123246 ACTCCCTCCGTCCGGAAAAA 61.123 55.000 5.23 0.00 44.66 1.94
2086 2174 0.672711 CTCCCTCCGTCCGGAAAAAC 60.673 60.000 5.23 0.00 44.66 2.43
2087 2175 1.123246 TCCCTCCGTCCGGAAAAACT 61.123 55.000 5.23 0.00 44.66 2.66
2088 2176 0.250597 CCCTCCGTCCGGAAAAACTT 60.251 55.000 5.23 0.00 44.66 2.66
2089 2177 0.872388 CCTCCGTCCGGAAAAACTTG 59.128 55.000 5.23 0.00 44.66 3.16
2090 2178 1.589803 CTCCGTCCGGAAAAACTTGT 58.410 50.000 5.23 0.00 44.66 3.16
2091 2179 1.529865 CTCCGTCCGGAAAAACTTGTC 59.470 52.381 5.23 0.00 44.66 3.18
2092 2180 1.134461 TCCGTCCGGAAAAACTTGTCA 60.134 47.619 5.23 0.00 42.05 3.58
2093 2181 1.877443 CCGTCCGGAAAAACTTGTCAT 59.123 47.619 5.23 0.00 37.50 3.06
2094 2182 2.095919 CCGTCCGGAAAAACTTGTCATC 60.096 50.000 5.23 0.00 37.50 2.92
2095 2183 2.546368 CGTCCGGAAAAACTTGTCATCA 59.454 45.455 5.23 0.00 0.00 3.07
2096 2184 3.002862 CGTCCGGAAAAACTTGTCATCAA 59.997 43.478 5.23 0.00 0.00 2.57
2097 2185 4.496673 CGTCCGGAAAAACTTGTCATCAAA 60.497 41.667 5.23 0.00 32.87 2.69
2098 2186 5.344884 GTCCGGAAAAACTTGTCATCAAAA 58.655 37.500 5.23 0.00 32.87 2.44
2099 2187 5.983118 GTCCGGAAAAACTTGTCATCAAAAT 59.017 36.000 5.23 0.00 32.87 1.82
2100 2188 5.982516 TCCGGAAAAACTTGTCATCAAAATG 59.017 36.000 0.00 0.00 32.87 2.32
2101 2189 5.177327 CCGGAAAAACTTGTCATCAAAATGG 59.823 40.000 0.00 0.00 33.42 3.16
2102 2190 5.982516 CGGAAAAACTTGTCATCAAAATGGA 59.017 36.000 0.00 0.00 33.42 3.41
2103 2191 6.074356 CGGAAAAACTTGTCATCAAAATGGAC 60.074 38.462 0.00 0.00 33.42 4.02
2104 2192 6.760770 GGAAAAACTTGTCATCAAAATGGACA 59.239 34.615 0.00 0.00 33.42 4.02
2105 2193 7.279758 GGAAAAACTTGTCATCAAAATGGACAA 59.720 33.333 0.00 0.00 34.59 3.18
2106 2194 8.558973 AAAAACTTGTCATCAAAATGGACAAA 57.441 26.923 7.70 0.00 34.98 2.83
2107 2195 8.558973 AAAACTTGTCATCAAAATGGACAAAA 57.441 26.923 7.70 0.00 34.98 2.44
2108 2196 8.558973 AAACTTGTCATCAAAATGGACAAAAA 57.441 26.923 7.70 0.00 34.98 1.94
2195 2610 5.049474 TGTCCGTTCATCTTCAGAACAATTG 60.049 40.000 3.24 3.24 44.22 2.32
2306 2729 2.857104 GCGGTGTTTGCAGAAACCTAAC 60.857 50.000 14.37 1.78 40.81 2.34
2323 2746 7.683437 AACCTAACTAAGCCTTATGTTTGAC 57.317 36.000 5.16 0.00 0.00 3.18
2326 2749 2.671396 ACTAAGCCTTATGTTTGACGCG 59.329 45.455 3.53 3.53 0.00 6.01
2703 4671 7.225734 GGTTTTGTAACTTGCATGGTGTAATTT 59.774 33.333 0.00 0.00 34.59 1.82
2749 4718 6.365970 TTCAGAGTCTTATCTTGGAGCTTT 57.634 37.500 0.00 0.00 0.00 3.51
2895 4874 1.376466 GCTCTGTCTTGCAGGGGAA 59.624 57.895 0.00 0.00 45.76 3.97
2991 4970 4.090057 GCAGCCGGTTTCTCGCAC 62.090 66.667 1.90 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.770097 TTTCTCTACTTTGCTCTGGATATATTG 57.230 33.333 0.00 0.00 0.00 1.90
10 11 9.692325 AAAATTTCTCTACTTTGCTCTGGATAT 57.308 29.630 0.00 0.00 0.00 1.63
11 12 8.950210 CAAAATTTCTCTACTTTGCTCTGGATA 58.050 33.333 0.00 0.00 0.00 2.59
12 13 7.094032 CCAAAATTTCTCTACTTTGCTCTGGAT 60.094 37.037 0.00 0.00 0.00 3.41
13 14 6.207417 CCAAAATTTCTCTACTTTGCTCTGGA 59.793 38.462 0.00 0.00 0.00 3.86
14 15 6.015940 ACCAAAATTTCTCTACTTTGCTCTGG 60.016 38.462 0.00 0.00 0.00 3.86
15 16 6.974965 ACCAAAATTTCTCTACTTTGCTCTG 58.025 36.000 0.00 0.00 0.00 3.35
16 17 7.520614 CGAACCAAAATTTCTCTACTTTGCTCT 60.521 37.037 0.00 0.00 0.00 4.09
17 18 6.578919 CGAACCAAAATTTCTCTACTTTGCTC 59.421 38.462 0.00 0.00 0.00 4.26
18 19 6.438763 CGAACCAAAATTTCTCTACTTTGCT 58.561 36.000 0.00 0.00 0.00 3.91
19 20 5.629435 CCGAACCAAAATTTCTCTACTTTGC 59.371 40.000 0.00 0.00 0.00 3.68
20 21 5.629435 GCCGAACCAAAATTTCTCTACTTTG 59.371 40.000 0.00 0.00 0.00 2.77
21 22 5.535030 AGCCGAACCAAAATTTCTCTACTTT 59.465 36.000 0.00 0.00 0.00 2.66
22 23 5.070685 AGCCGAACCAAAATTTCTCTACTT 58.929 37.500 0.00 0.00 0.00 2.24
23 24 4.652822 AGCCGAACCAAAATTTCTCTACT 58.347 39.130 0.00 0.00 0.00 2.57
24 25 5.372547 AAGCCGAACCAAAATTTCTCTAC 57.627 39.130 0.00 0.00 0.00 2.59
25 26 7.148137 GGAATAAGCCGAACCAAAATTTCTCTA 60.148 37.037 0.00 0.00 0.00 2.43
26 27 6.350194 GGAATAAGCCGAACCAAAATTTCTCT 60.350 38.462 0.00 0.00 0.00 3.10
27 28 5.805486 GGAATAAGCCGAACCAAAATTTCTC 59.195 40.000 0.00 0.00 0.00 2.87
28 29 5.480422 AGGAATAAGCCGAACCAAAATTTCT 59.520 36.000 0.00 0.00 0.00 2.52
29 30 5.576774 CAGGAATAAGCCGAACCAAAATTTC 59.423 40.000 0.00 0.00 0.00 2.17
30 31 5.245075 TCAGGAATAAGCCGAACCAAAATTT 59.755 36.000 0.00 0.00 0.00 1.82
31 32 4.770010 TCAGGAATAAGCCGAACCAAAATT 59.230 37.500 0.00 0.00 0.00 1.82
32 33 4.157840 GTCAGGAATAAGCCGAACCAAAAT 59.842 41.667 0.00 0.00 0.00 1.82
33 34 3.504520 GTCAGGAATAAGCCGAACCAAAA 59.495 43.478 0.00 0.00 0.00 2.44
34 35 3.078837 GTCAGGAATAAGCCGAACCAAA 58.921 45.455 0.00 0.00 0.00 3.28
35 36 2.039216 TGTCAGGAATAAGCCGAACCAA 59.961 45.455 0.00 0.00 0.00 3.67
36 37 1.626321 TGTCAGGAATAAGCCGAACCA 59.374 47.619 0.00 0.00 0.00 3.67
37 38 2.396590 TGTCAGGAATAAGCCGAACC 57.603 50.000 0.00 0.00 0.00 3.62
38 39 4.694339 AGTATGTCAGGAATAAGCCGAAC 58.306 43.478 0.00 0.00 0.00 3.95
39 40 4.202223 GGAGTATGTCAGGAATAAGCCGAA 60.202 45.833 0.00 0.00 0.00 4.30
40 41 3.321111 GGAGTATGTCAGGAATAAGCCGA 59.679 47.826 0.00 0.00 0.00 5.54
41 42 3.555168 GGGAGTATGTCAGGAATAAGCCG 60.555 52.174 0.00 0.00 0.00 5.52
42 43 3.648545 AGGGAGTATGTCAGGAATAAGCC 59.351 47.826 0.00 0.00 0.00 4.35
43 44 4.262678 GGAGGGAGTATGTCAGGAATAAGC 60.263 50.000 0.00 0.00 0.00 3.09
44 45 4.021894 CGGAGGGAGTATGTCAGGAATAAG 60.022 50.000 0.00 0.00 0.00 1.73
45 46 3.895656 CGGAGGGAGTATGTCAGGAATAA 59.104 47.826 0.00 0.00 0.00 1.40
46 47 3.117246 ACGGAGGGAGTATGTCAGGAATA 60.117 47.826 0.00 0.00 0.00 1.75
47 48 2.320781 CGGAGGGAGTATGTCAGGAAT 58.679 52.381 0.00 0.00 0.00 3.01
48 49 1.006758 ACGGAGGGAGTATGTCAGGAA 59.993 52.381 0.00 0.00 0.00 3.36
49 50 0.629596 ACGGAGGGAGTATGTCAGGA 59.370 55.000 0.00 0.00 0.00 3.86
50 51 1.409427 GAACGGAGGGAGTATGTCAGG 59.591 57.143 0.00 0.00 0.00 3.86
51 52 1.409427 GGAACGGAGGGAGTATGTCAG 59.591 57.143 0.00 0.00 0.00 3.51
52 53 1.006758 AGGAACGGAGGGAGTATGTCA 59.993 52.381 0.00 0.00 0.00 3.58
53 54 1.777941 AGGAACGGAGGGAGTATGTC 58.222 55.000 0.00 0.00 0.00 3.06
54 55 3.393426 TTAGGAACGGAGGGAGTATGT 57.607 47.619 0.00 0.00 0.00 2.29
55 56 4.101119 ACATTTAGGAACGGAGGGAGTATG 59.899 45.833 0.00 0.00 0.00 2.39
56 57 4.296056 ACATTTAGGAACGGAGGGAGTAT 58.704 43.478 0.00 0.00 0.00 2.12
57 58 3.716431 ACATTTAGGAACGGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
58 59 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
59 60 3.629142 AACATTTAGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
60 61 3.073356 ACAAACATTTAGGAACGGAGGGA 59.927 43.478 0.00 0.00 0.00 4.20
61 62 3.418047 ACAAACATTTAGGAACGGAGGG 58.582 45.455 0.00 0.00 0.00 4.30
62 63 4.324267 AGACAAACATTTAGGAACGGAGG 58.676 43.478 0.00 0.00 0.00 4.30
63 64 5.941948 AAGACAAACATTTAGGAACGGAG 57.058 39.130 0.00 0.00 0.00 4.63
64 65 6.059484 AGAAAGACAAACATTTAGGAACGGA 58.941 36.000 0.00 0.00 0.00 4.69
65 66 6.313744 AGAAAGACAAACATTTAGGAACGG 57.686 37.500 0.00 0.00 0.00 4.44
66 67 8.306680 TCTAGAAAGACAAACATTTAGGAACG 57.693 34.615 0.00 0.00 0.00 3.95
67 68 9.490379 TCTCTAGAAAGACAAACATTTAGGAAC 57.510 33.333 0.00 0.00 0.00 3.62
75 76 9.342308 TGTTGAAATCTCTAGAAAGACAAACAT 57.658 29.630 0.00 0.00 0.00 2.71
76 77 8.731275 TGTTGAAATCTCTAGAAAGACAAACA 57.269 30.769 0.00 0.00 0.00 2.83
77 78 9.657121 CTTGTTGAAATCTCTAGAAAGACAAAC 57.343 33.333 0.00 0.00 0.00 2.93
78 79 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
79 80 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
80 81 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
81 82 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
82 83 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
83 84 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
84 85 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
85 86 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
86 87 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
87 88 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
89 90 9.376075 CATATGTAGTCACTTGTTGAAATCTCT 57.624 33.333 0.00 0.00 35.39 3.10
90 91 8.607459 CCATATGTAGTCACTTGTTGAAATCTC 58.393 37.037 1.24 0.00 35.39 2.75
91 92 8.321353 TCCATATGTAGTCACTTGTTGAAATCT 58.679 33.333 1.24 0.00 35.39 2.40
92 93 8.492673 TCCATATGTAGTCACTTGTTGAAATC 57.507 34.615 1.24 0.00 35.39 2.17
93 94 7.066284 GCTCCATATGTAGTCACTTGTTGAAAT 59.934 37.037 1.24 0.00 35.39 2.17
94 95 6.371548 GCTCCATATGTAGTCACTTGTTGAAA 59.628 38.462 1.24 0.00 35.39 2.69
95 96 5.874810 GCTCCATATGTAGTCACTTGTTGAA 59.125 40.000 1.24 0.00 35.39 2.69
96 97 5.046663 TGCTCCATATGTAGTCACTTGTTGA 60.047 40.000 1.24 0.00 0.00 3.18
97 98 5.178061 TGCTCCATATGTAGTCACTTGTTG 58.822 41.667 1.24 0.00 0.00 3.33
98 99 5.420725 TGCTCCATATGTAGTCACTTGTT 57.579 39.130 1.24 0.00 0.00 2.83
99 100 5.420725 TTGCTCCATATGTAGTCACTTGT 57.579 39.130 1.24 0.00 0.00 3.16
100 101 6.741992 TTTTGCTCCATATGTAGTCACTTG 57.258 37.500 1.24 0.00 0.00 3.16
101 102 7.112122 TCATTTTGCTCCATATGTAGTCACTT 58.888 34.615 1.24 0.00 0.00 3.16
102 103 6.653020 TCATTTTGCTCCATATGTAGTCACT 58.347 36.000 1.24 0.00 0.00 3.41
103 104 6.540189 ACTCATTTTGCTCCATATGTAGTCAC 59.460 38.462 1.24 0.00 0.00 3.67
104 105 6.539826 CACTCATTTTGCTCCATATGTAGTCA 59.460 38.462 1.24 0.00 0.00 3.41
105 106 6.763135 TCACTCATTTTGCTCCATATGTAGTC 59.237 38.462 1.24 0.00 0.00 2.59
106 107 6.653020 TCACTCATTTTGCTCCATATGTAGT 58.347 36.000 1.24 0.00 0.00 2.73
107 108 6.765036 ACTCACTCATTTTGCTCCATATGTAG 59.235 38.462 1.24 0.00 0.00 2.74
108 109 6.653020 ACTCACTCATTTTGCTCCATATGTA 58.347 36.000 1.24 0.00 0.00 2.29
109 110 5.503927 ACTCACTCATTTTGCTCCATATGT 58.496 37.500 1.24 0.00 0.00 2.29
110 111 5.821470 AGACTCACTCATTTTGCTCCATATG 59.179 40.000 0.00 0.00 0.00 1.78
111 112 5.999044 AGACTCACTCATTTTGCTCCATAT 58.001 37.500 0.00 0.00 0.00 1.78
112 113 5.426689 AGACTCACTCATTTTGCTCCATA 57.573 39.130 0.00 0.00 0.00 2.74
113 114 4.298103 AGACTCACTCATTTTGCTCCAT 57.702 40.909 0.00 0.00 0.00 3.41
114 115 3.777106 AGACTCACTCATTTTGCTCCA 57.223 42.857 0.00 0.00 0.00 3.86
115 116 4.390297 GTGTAGACTCACTCATTTTGCTCC 59.610 45.833 0.00 0.00 35.68 4.70
116 117 5.233988 AGTGTAGACTCACTCATTTTGCTC 58.766 41.667 0.00 0.00 44.07 4.26
117 118 5.220710 AGTGTAGACTCACTCATTTTGCT 57.779 39.130 0.00 0.00 44.07 3.91
136 137 9.900710 GGATGTGTATAGACATACTTTAGAGTG 57.099 37.037 16.24 0.00 36.67 3.51
137 138 8.784994 CGGATGTGTATAGACATACTTTAGAGT 58.215 37.037 19.92 0.00 36.67 3.24
138 139 8.784994 ACGGATGTGTATAGACATACTTTAGAG 58.215 37.037 19.92 8.33 36.67 2.43
139 140 8.687292 ACGGATGTGTATAGACATACTTTAGA 57.313 34.615 19.92 0.00 36.67 2.10
142 143 8.857098 ACATACGGATGTGTATAGACATACTTT 58.143 33.333 19.92 11.09 44.90 2.66
143 144 8.405418 ACATACGGATGTGTATAGACATACTT 57.595 34.615 19.92 14.57 44.90 2.24
144 145 7.997773 ACATACGGATGTGTATAGACATACT 57.002 36.000 19.92 11.31 44.90 2.12
172 173 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
173 174 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
191 192 8.981659 CCCTCCATTCCTAAATATTTGTCTTTT 58.018 33.333 11.05 0.00 0.00 2.27
192 193 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
193 194 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
194 195 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
195 196 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
196 197 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
200 201 9.453830 GGATATACTCCCTCCATTCCTAAATAT 57.546 37.037 0.00 0.00 38.19 1.28
201 202 8.855804 GGATATACTCCCTCCATTCCTAAATA 57.144 38.462 0.00 0.00 38.19 1.40
202 203 7.757242 GGATATACTCCCTCCATTCCTAAAT 57.243 40.000 0.00 0.00 38.19 1.40
216 217 3.702045 CCGGAGAAGATGGGATATACTCC 59.298 52.174 0.00 0.00 44.11 3.85
217 218 4.158764 CACCGGAGAAGATGGGATATACTC 59.841 50.000 9.46 0.00 0.00 2.59
218 219 4.090090 CACCGGAGAAGATGGGATATACT 58.910 47.826 9.46 0.00 0.00 2.12
219 220 4.087182 TCACCGGAGAAGATGGGATATAC 58.913 47.826 9.46 0.00 0.00 1.47
220 221 4.397919 TCACCGGAGAAGATGGGATATA 57.602 45.455 9.46 0.00 0.00 0.86
221 222 3.260269 TCACCGGAGAAGATGGGATAT 57.740 47.619 9.46 0.00 0.00 1.63
222 223 2.767644 TCACCGGAGAAGATGGGATA 57.232 50.000 9.46 0.00 0.00 2.59
223 224 1.765314 CTTCACCGGAGAAGATGGGAT 59.235 52.381 30.97 0.00 46.18 3.85
224 225 1.195115 CTTCACCGGAGAAGATGGGA 58.805 55.000 30.97 1.47 46.18 4.37
225 226 1.195115 TCTTCACCGGAGAAGATGGG 58.805 55.000 32.47 14.28 46.62 4.00
230 231 4.440802 CCAGAATACTCTTCACCGGAGAAG 60.441 50.000 29.43 29.43 44.96 2.85
231 232 3.447586 CCAGAATACTCTTCACCGGAGAA 59.552 47.826 9.46 12.20 35.10 2.87
232 233 3.024547 CCAGAATACTCTTCACCGGAGA 58.975 50.000 9.46 1.33 35.10 3.71
233 234 2.761208 ACCAGAATACTCTTCACCGGAG 59.239 50.000 9.46 0.00 36.92 4.63
234 235 2.496070 CACCAGAATACTCTTCACCGGA 59.504 50.000 9.46 0.00 0.00 5.14
235 236 2.893637 CACCAGAATACTCTTCACCGG 58.106 52.381 0.00 0.00 0.00 5.28
236 237 2.093973 AGCACCAGAATACTCTTCACCG 60.094 50.000 0.00 0.00 0.00 4.94
237 238 3.618690 AGCACCAGAATACTCTTCACC 57.381 47.619 0.00 0.00 0.00 4.02
238 239 5.106515 GGAAAAGCACCAGAATACTCTTCAC 60.107 44.000 0.00 0.00 0.00 3.18
243 244 3.686016 TGGGAAAAGCACCAGAATACTC 58.314 45.455 0.00 0.00 31.92 2.59
253 254 4.500265 TCCAGCTGGGAAAAGCAC 57.500 55.556 32.23 0.00 44.80 4.40
275 276 3.106054 AGAGTCTCCATCTGCATGAACT 58.894 45.455 0.00 0.00 30.57 3.01
276 277 3.132646 AGAGAGTCTCCATCTGCATGAAC 59.867 47.826 16.74 0.00 30.57 3.18
283 284 6.219417 ACAACATAAGAGAGTCTCCATCTG 57.781 41.667 16.74 11.02 0.00 2.90
297 301 3.242381 TGCGCATCATCGAACAACATAAG 60.242 43.478 5.66 0.00 0.00 1.73
300 304 1.085893 TGCGCATCATCGAACAACAT 58.914 45.000 5.66 0.00 0.00 2.71
330 334 5.071115 TGACCGTACCATTATCATCCAATCA 59.929 40.000 0.00 0.00 0.00 2.57
331 335 5.547465 TGACCGTACCATTATCATCCAATC 58.453 41.667 0.00 0.00 0.00 2.67
363 367 2.494073 CAGAGACACAGTCCCCTAGTTC 59.506 54.545 0.00 0.00 32.18 3.01
379 383 1.762370 TGAAGCAGACCACAACAGAGA 59.238 47.619 0.00 0.00 0.00 3.10
380 384 1.869767 GTGAAGCAGACCACAACAGAG 59.130 52.381 0.00 0.00 33.72 3.35
386 390 1.344438 CACTAGGTGAAGCAGACCACA 59.656 52.381 0.00 0.00 35.23 4.17
387 391 1.618837 TCACTAGGTGAAGCAGACCAC 59.381 52.381 0.00 0.00 39.78 4.16
390 394 1.548269 AGCTCACTAGGTGAAGCAGAC 59.452 52.381 17.26 0.00 42.26 3.51
391 395 1.930251 AGCTCACTAGGTGAAGCAGA 58.070 50.000 17.26 0.00 42.26 4.26
392 396 2.028658 TCAAGCTCACTAGGTGAAGCAG 60.029 50.000 17.26 12.17 42.26 4.24
394 398 2.028567 AGTCAAGCTCACTAGGTGAAGC 60.029 50.000 0.00 7.60 42.26 3.86
395 399 3.951775 AGTCAAGCTCACTAGGTGAAG 57.048 47.619 0.00 0.00 42.26 3.02
396 400 3.244215 CCAAGTCAAGCTCACTAGGTGAA 60.244 47.826 0.00 0.00 42.26 3.18
397 401 2.300152 CCAAGTCAAGCTCACTAGGTGA 59.700 50.000 0.00 0.43 40.50 4.02
398 402 2.037772 ACCAAGTCAAGCTCACTAGGTG 59.962 50.000 0.00 0.00 32.57 4.00
399 403 2.330216 ACCAAGTCAAGCTCACTAGGT 58.670 47.619 0.00 0.00 34.01 3.08
401 405 3.244215 TGGAACCAAGTCAAGCTCACTAG 60.244 47.826 0.00 0.00 0.00 2.57
402 406 2.703536 TGGAACCAAGTCAAGCTCACTA 59.296 45.455 0.00 0.00 0.00 2.74
403 407 1.490490 TGGAACCAAGTCAAGCTCACT 59.510 47.619 0.00 0.00 0.00 3.41
405 409 2.507484 CATGGAACCAAGTCAAGCTCA 58.493 47.619 0.00 0.00 0.00 4.26
407 411 1.251251 GCATGGAACCAAGTCAAGCT 58.749 50.000 0.00 0.00 0.00 3.74
408 412 0.244721 GGCATGGAACCAAGTCAAGC 59.755 55.000 0.00 0.00 0.00 4.01
409 413 0.523072 CGGCATGGAACCAAGTCAAG 59.477 55.000 0.00 0.00 0.00 3.02
411 415 0.888736 CACGGCATGGAACCAAGTCA 60.889 55.000 0.00 0.00 0.00 3.41
413 417 0.038166 ATCACGGCATGGAACCAAGT 59.962 50.000 0.00 0.00 0.00 3.16
414 418 0.452987 CATCACGGCATGGAACCAAG 59.547 55.000 0.00 0.00 0.00 3.61
418 422 1.026182 TCTGCATCACGGCATGGAAC 61.026 55.000 0.00 0.00 43.97 3.62
419 423 0.322366 TTCTGCATCACGGCATGGAA 60.322 50.000 0.00 0.00 43.97 3.53
420 424 0.322366 TTTCTGCATCACGGCATGGA 60.322 50.000 0.00 0.00 43.97 3.41
422 426 0.524816 GCTTTCTGCATCACGGCATG 60.525 55.000 0.00 0.00 43.97 4.06
423 427 1.805254 GCTTTCTGCATCACGGCAT 59.195 52.632 0.00 0.00 43.97 4.40
424 428 3.266964 GCTTTCTGCATCACGGCA 58.733 55.556 0.00 0.00 42.53 5.69
433 437 5.708948 TGGTATTACACAAATGCTTTCTGC 58.291 37.500 0.00 0.00 43.25 4.26
438 442 6.596106 TGTCGTATGGTATTACACAAATGCTT 59.404 34.615 0.00 0.00 31.40 3.91
453 457 0.108615 GCTGAGTGCTGTCGTATGGT 60.109 55.000 0.00 0.00 38.95 3.55
472 476 5.542779 AGCAGTAACTCTCAAACAGTAAGG 58.457 41.667 0.00 0.00 0.00 2.69
474 478 5.069914 TGGAGCAGTAACTCTCAAACAGTAA 59.930 40.000 0.00 0.00 36.87 2.24
477 481 3.743396 GTGGAGCAGTAACTCTCAAACAG 59.257 47.826 0.00 0.00 36.87 3.16
490 494 5.939764 TTAGATAGACAATGTGGAGCAGT 57.060 39.130 0.00 0.00 0.00 4.40
516 520 5.968387 AATAATCGTCTTTTGTAGCGGAG 57.032 39.130 0.00 0.00 0.00 4.63
524 528 9.151752 CGATCTGATGAAAATAATCGTCTTTTG 57.848 33.333 0.00 0.00 36.50 2.44
526 530 8.543774 GTCGATCTGATGAAAATAATCGTCTTT 58.456 33.333 0.00 0.00 37.74 2.52
545 549 5.279356 GGAAATTTATAGACCCCGTCGATCT 60.279 44.000 0.00 0.00 37.67 2.75
546 550 4.928020 GGAAATTTATAGACCCCGTCGATC 59.072 45.833 0.00 0.00 37.67 3.69
549 553 4.056050 CTGGAAATTTATAGACCCCGTCG 58.944 47.826 0.00 0.00 37.67 5.12
552 556 4.699925 TCCTGGAAATTTATAGACCCCG 57.300 45.455 0.00 0.00 0.00 5.73
555 559 6.901300 AGGACTTCCTGGAAATTTATAGACC 58.099 40.000 10.86 6.64 46.55 3.85
584 591 4.060900 TCTGCTGCTTCTTACTTTGACTG 58.939 43.478 0.00 0.00 0.00 3.51
588 595 4.152045 CACTCTCTGCTGCTTCTTACTTTG 59.848 45.833 0.00 0.00 0.00 2.77
589 596 4.202305 ACACTCTCTGCTGCTTCTTACTTT 60.202 41.667 0.00 0.00 0.00 2.66
594 601 1.690893 TCACACTCTCTGCTGCTTCTT 59.309 47.619 0.00 0.00 0.00 2.52
598 605 1.415659 AGTTTCACACTCTCTGCTGCT 59.584 47.619 0.00 0.00 0.00 4.24
616 623 5.418840 AGGAACAGTCATTGAAACAAACAGT 59.581 36.000 0.00 0.00 0.00 3.55
619 626 5.650543 ACAGGAACAGTCATTGAAACAAAC 58.349 37.500 0.00 0.00 0.00 2.93
629 636 6.051717 GCATATGAAGTACAGGAACAGTCAT 58.948 40.000 6.97 0.00 33.50 3.06
654 661 5.860182 CCACAGTAAGCATGTTTCATTGAAG 59.140 40.000 0.00 0.00 0.00 3.02
662 675 4.072131 CCAGTACCACAGTAAGCATGTTT 58.928 43.478 0.00 0.00 0.00 2.83
680 693 1.342074 TACTCTGTGCAGCTTCCAGT 58.658 50.000 0.00 0.00 0.00 4.00
685 698 2.816087 CAACCAATACTCTGTGCAGCTT 59.184 45.455 0.00 0.00 0.00 3.74
695 708 3.432252 CGAACCAGACACAACCAATACTC 59.568 47.826 0.00 0.00 0.00 2.59
700 719 0.542333 TCCGAACCAGACACAACCAA 59.458 50.000 0.00 0.00 0.00 3.67
703 722 2.737252 GAGATTCCGAACCAGACACAAC 59.263 50.000 0.00 0.00 0.00 3.32
706 725 1.067776 ACGAGATTCCGAACCAGACAC 60.068 52.381 0.00 0.00 0.00 3.67
717 736 7.487189 CCCATACGTATATACAAACGAGATTCC 59.513 40.741 7.96 0.00 41.55 3.01
722 741 7.538678 GGTTACCCATACGTATATACAAACGAG 59.461 40.741 7.96 0.00 41.55 4.18
743 768 6.308371 TGGAGTTCGAATTTTCTTGGTTAC 57.692 37.500 0.00 0.00 0.00 2.50
747 772 5.689383 TCTTGGAGTTCGAATTTTCTTGG 57.311 39.130 0.00 0.00 0.00 3.61
775 812 5.587043 CACCTACCACTGTTAGAACAACAAA 59.413 40.000 0.00 0.00 38.66 2.83
805 845 2.936032 ACCAACCAGGAGGAGGGC 60.936 66.667 9.36 0.00 41.22 5.19
816 856 2.222027 CACAAGAGAACCAGACCAACC 58.778 52.381 0.00 0.00 0.00 3.77
859 899 7.824779 ACTATTGGAATCCACTAGTCTTTCAAC 59.175 37.037 21.96 0.00 43.41 3.18
861 901 7.331026 CACTATTGGAATCCACTAGTCTTTCA 58.669 38.462 24.01 0.00 43.41 2.69
903 943 7.519843 TCGTTGCTTTCTTTATTTGCGTATTA 58.480 30.769 0.00 0.00 0.00 0.98
938 978 3.204382 ACCTCCTTCTCCAAGTTTTTCCA 59.796 43.478 0.00 0.00 0.00 3.53
981 1021 4.164221 ACCATAGAGGAACCTGGTAATGTG 59.836 45.833 0.00 0.00 40.16 3.21
987 1027 1.584724 CCACCATAGAGGAACCTGGT 58.415 55.000 0.00 0.00 42.66 4.00
1016 1062 3.330701 ACCCTGTCCAAGATCTTTTAGCA 59.669 43.478 4.86 2.27 0.00 3.49
1026 1072 0.687354 GCTTCTCACCCTGTCCAAGA 59.313 55.000 0.00 0.00 0.00 3.02
1038 1084 0.037882 CTGCTCGGAACTGCTTCTCA 60.038 55.000 0.00 0.00 0.00 3.27
1047 1093 0.319900 TCTGCACTTCTGCTCGGAAC 60.320 55.000 0.00 0.00 44.57 3.62
1078 1124 5.751680 ACGAACAAGATTGATGTGTTGAAG 58.248 37.500 0.00 0.00 35.67 3.02
1134 1180 4.587262 TCCATGTACTCGTATACCAGCAAT 59.413 41.667 0.00 0.00 0.00 3.56
1311 1357 7.066163 CACAAATCTGCATCAAGGAGTACATTA 59.934 37.037 0.00 0.00 36.95 1.90
1335 1381 2.841442 AGTCTGCAACCTTAGGACAC 57.159 50.000 4.77 0.00 0.00 3.67
1375 1421 0.748005 GCCCTGCTAAAATCTCGGCA 60.748 55.000 0.00 0.00 34.98 5.69
1414 1460 0.671781 AGCGCAAGATATCCGATGGC 60.672 55.000 11.47 3.34 43.02 4.40
1433 1479 0.252881 AAGCCCTGAGATCCACTCCA 60.253 55.000 0.00 0.00 44.34 3.86
1481 1527 4.736126 TCAAGAAGCATCATTCCGTAGA 57.264 40.909 0.00 0.00 0.00 2.59
1608 1684 3.051581 ACGGAGGGAGTACTATCCAGTA 58.948 50.000 17.14 0.00 41.52 2.74
1609 1685 1.851653 ACGGAGGGAGTACTATCCAGT 59.148 52.381 17.14 13.46 41.52 4.00
1610 1686 2.660670 ACGGAGGGAGTACTATCCAG 57.339 55.000 17.14 13.01 41.52 3.86
1611 1687 2.423947 GGAACGGAGGGAGTACTATCCA 60.424 54.545 17.14 0.00 41.52 3.41
1613 1689 2.941480 TGGAACGGAGGGAGTACTATC 58.059 52.381 0.00 0.00 0.00 2.08
1614 1690 3.393426 TTGGAACGGAGGGAGTACTAT 57.607 47.619 0.00 0.00 0.00 2.12
1615 1691 2.905415 TTGGAACGGAGGGAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
1616 1692 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
1617 1693 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
1618 1694 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
1619 1695 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
1620 1696 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
1621 1697 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
1622 1698 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1623 1699 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
1624 1700 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
1625 1701 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
1626 1702 2.331194 ACGACGAGTAATTTGGAACGG 58.669 47.619 0.00 0.00 0.00 4.44
1627 1703 3.426191 TCAACGACGAGTAATTTGGAACG 59.574 43.478 0.00 0.00 0.00 3.95
1628 1704 4.977741 TCAACGACGAGTAATTTGGAAC 57.022 40.909 0.00 0.00 0.00 3.62
1629 1705 5.987777 TTTCAACGACGAGTAATTTGGAA 57.012 34.783 0.00 0.00 0.00 3.53
1630 1706 5.106869 CCATTTCAACGACGAGTAATTTGGA 60.107 40.000 0.00 0.00 0.00 3.53
1631 1707 5.086058 CCATTTCAACGACGAGTAATTTGG 58.914 41.667 0.00 0.00 0.00 3.28
1632 1708 5.922546 TCCATTTCAACGACGAGTAATTTG 58.077 37.500 0.00 0.00 0.00 2.32
1633 1709 6.148811 ACATCCATTTCAACGACGAGTAATTT 59.851 34.615 0.00 0.00 0.00 1.82
1634 1710 5.642063 ACATCCATTTCAACGACGAGTAATT 59.358 36.000 0.00 0.00 0.00 1.40
1635 1711 5.175859 ACATCCATTTCAACGACGAGTAAT 58.824 37.500 0.00 0.00 0.00 1.89
1636 1712 4.562082 ACATCCATTTCAACGACGAGTAA 58.438 39.130 0.00 0.00 0.00 2.24
1637 1713 4.182693 ACATCCATTTCAACGACGAGTA 57.817 40.909 0.00 0.00 0.00 2.59
1638 1714 3.040147 ACATCCATTTCAACGACGAGT 57.960 42.857 0.00 0.00 0.00 4.18
1639 1715 5.043903 AGATACATCCATTTCAACGACGAG 58.956 41.667 0.00 0.00 0.00 4.18
1640 1716 5.006153 AGATACATCCATTTCAACGACGA 57.994 39.130 0.00 0.00 0.00 4.20
1641 1717 6.206498 TCTAGATACATCCATTTCAACGACG 58.794 40.000 0.00 0.00 0.00 5.12
1642 1718 7.707035 AGTTCTAGATACATCCATTTCAACGAC 59.293 37.037 0.00 0.00 0.00 4.34
1643 1719 7.782049 AGTTCTAGATACATCCATTTCAACGA 58.218 34.615 0.00 0.00 0.00 3.85
1644 1720 9.529325 TTAGTTCTAGATACATCCATTTCAACG 57.471 33.333 0.00 0.00 0.00 4.10
1671 1747 8.191446 GCACGTATGGATGTATCTAGATGTATT 58.809 37.037 15.79 0.00 29.44 1.89
1672 1748 7.467403 CGCACGTATGGATGTATCTAGATGTAT 60.467 40.741 15.79 9.11 29.44 2.29
1673 1749 6.183360 CGCACGTATGGATGTATCTAGATGTA 60.183 42.308 15.79 4.44 29.44 2.29
1674 1750 5.392057 CGCACGTATGGATGTATCTAGATGT 60.392 44.000 15.79 1.25 30.36 3.06
1675 1751 5.030936 CGCACGTATGGATGTATCTAGATG 58.969 45.833 15.79 0.00 0.00 2.90
1676 1752 4.941873 TCGCACGTATGGATGTATCTAGAT 59.058 41.667 10.73 10.73 0.00 1.98
1677 1753 4.153655 GTCGCACGTATGGATGTATCTAGA 59.846 45.833 0.00 0.00 0.00 2.43
1678 1754 4.083484 TGTCGCACGTATGGATGTATCTAG 60.083 45.833 0.00 0.00 0.00 2.43
1679 1755 3.816523 TGTCGCACGTATGGATGTATCTA 59.183 43.478 0.00 0.00 0.00 1.98
1680 1756 2.621526 TGTCGCACGTATGGATGTATCT 59.378 45.455 0.00 0.00 0.00 1.98
1681 1757 3.007979 TGTCGCACGTATGGATGTATC 57.992 47.619 0.00 0.00 0.00 2.24
1682 1758 3.181479 ACTTGTCGCACGTATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
1683 1759 2.164827 ACTTGTCGCACGTATGGATGTA 59.835 45.455 0.00 0.00 0.00 2.29
1684 1760 1.067142 ACTTGTCGCACGTATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
1685 1761 1.640428 ACTTGTCGCACGTATGGATG 58.360 50.000 0.00 0.00 0.00 3.51
1686 1762 3.513680 TTACTTGTCGCACGTATGGAT 57.486 42.857 0.00 0.00 0.00 3.41
1687 1763 3.513680 ATTACTTGTCGCACGTATGGA 57.486 42.857 0.00 0.00 0.00 3.41
1688 1764 3.301579 CGAATTACTTGTCGCACGTATGG 60.302 47.826 0.00 0.00 0.00 2.74
1689 1765 3.301579 CCGAATTACTTGTCGCACGTATG 60.302 47.826 0.00 0.00 35.93 2.39
1690 1766 2.855963 CCGAATTACTTGTCGCACGTAT 59.144 45.455 0.00 0.00 35.93 3.06
1691 1767 2.095314 TCCGAATTACTTGTCGCACGTA 60.095 45.455 0.00 0.00 35.93 3.57
1692 1768 1.065358 CCGAATTACTTGTCGCACGT 58.935 50.000 0.00 0.00 35.93 4.49
1693 1769 1.342555 TCCGAATTACTTGTCGCACG 58.657 50.000 0.00 0.00 35.93 5.34
1694 1770 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
1695 1771 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
1696 1772 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
1697 1773 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
1698 1774 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1699 1775 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
1700 1776 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
1701 1777 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
1702 1778 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
1703 1779 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
1704 1780 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
1705 1781 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
1706 1782 1.400737 CTACTCCCTCCGTTCCGAAT 58.599 55.000 0.00 0.00 0.00 3.34
1707 1783 0.682209 CCTACTCCCTCCGTTCCGAA 60.682 60.000 0.00 0.00 0.00 4.30
1708 1784 1.077212 CCTACTCCCTCCGTTCCGA 60.077 63.158 0.00 0.00 0.00 4.55
1709 1785 0.969409 AACCTACTCCCTCCGTTCCG 60.969 60.000 0.00 0.00 0.00 4.30
1710 1786 0.535797 CAACCTACTCCCTCCGTTCC 59.464 60.000 0.00 0.00 0.00 3.62
1711 1787 0.535797 CCAACCTACTCCCTCCGTTC 59.464 60.000 0.00 0.00 0.00 3.95
1712 1788 0.115745 TCCAACCTACTCCCTCCGTT 59.884 55.000 0.00 0.00 0.00 4.44
1713 1789 0.115745 TTCCAACCTACTCCCTCCGT 59.884 55.000 0.00 0.00 0.00 4.69
1714 1790 0.824759 CTTCCAACCTACTCCCTCCG 59.175 60.000 0.00 0.00 0.00 4.63
1715 1791 1.205055 CCTTCCAACCTACTCCCTCC 58.795 60.000 0.00 0.00 0.00 4.30
1716 1792 0.542333 GCCTTCCAACCTACTCCCTC 59.458 60.000 0.00 0.00 0.00 4.30
1717 1793 1.265454 CGCCTTCCAACCTACTCCCT 61.265 60.000 0.00 0.00 0.00 4.20
1718 1794 1.221021 CGCCTTCCAACCTACTCCC 59.779 63.158 0.00 0.00 0.00 4.30
1719 1795 0.108281 GTCGCCTTCCAACCTACTCC 60.108 60.000 0.00 0.00 0.00 3.85
1720 1796 0.458025 CGTCGCCTTCCAACCTACTC 60.458 60.000 0.00 0.00 0.00 2.59
1738 1814 2.125229 AGCTGCTCCACATCTGCG 60.125 61.111 0.00 0.00 33.26 5.18
1825 1901 1.675714 CCCTCTAGCATGCGAACAACA 60.676 52.381 13.01 0.00 0.00 3.33
1939 2015 1.947456 ACGAAGCTTTTGGTCCTTCAC 59.053 47.619 0.00 0.00 35.80 3.18
2046 2133 6.460953 GGGAGTAACAAATTGCAGTTCAGAAA 60.461 38.462 0.00 0.00 0.00 2.52
2068 2156 1.123246 AGTTTTTCCGGACGGAGGGA 61.123 55.000 13.64 1.83 46.06 4.20
2069 2157 0.250597 AAGTTTTTCCGGACGGAGGG 60.251 55.000 13.64 0.00 46.06 4.30
2070 2158 0.872388 CAAGTTTTTCCGGACGGAGG 59.128 55.000 13.64 0.00 46.06 4.30
2071 2159 1.529865 GACAAGTTTTTCCGGACGGAG 59.470 52.381 13.64 3.15 46.06 4.63
2073 2161 1.301423 TGACAAGTTTTTCCGGACGG 58.699 50.000 1.83 3.96 0.00 4.79
2074 2162 2.546368 TGATGACAAGTTTTTCCGGACG 59.454 45.455 1.83 0.00 0.00 4.79
2075 2163 4.561735 TTGATGACAAGTTTTTCCGGAC 57.438 40.909 1.83 0.00 0.00 4.79
2076 2164 5.584253 TTTTGATGACAAGTTTTTCCGGA 57.416 34.783 0.00 0.00 37.32 5.14
2077 2165 5.177327 CCATTTTGATGACAAGTTTTTCCGG 59.823 40.000 0.00 0.00 37.32 5.14
2078 2166 5.982516 TCCATTTTGATGACAAGTTTTTCCG 59.017 36.000 0.00 0.00 37.32 4.30
2079 2167 6.760770 TGTCCATTTTGATGACAAGTTTTTCC 59.239 34.615 0.00 0.00 37.32 3.13
2080 2168 7.769272 TGTCCATTTTGATGACAAGTTTTTC 57.231 32.000 0.00 0.00 37.32 2.29
2081 2169 8.558973 TTTGTCCATTTTGATGACAAGTTTTT 57.441 26.923 0.00 0.00 37.13 1.94
2082 2170 8.558973 TTTTGTCCATTTTGATGACAAGTTTT 57.441 26.923 0.00 0.00 37.13 2.43
2083 2171 8.558973 TTTTTGTCCATTTTGATGACAAGTTT 57.441 26.923 0.00 0.00 37.13 2.66
2105 2193 6.152831 ACAGCTTTTCCACAAGTCTACTTTTT 59.847 34.615 0.00 0.00 33.11 1.94
2106 2194 5.652452 ACAGCTTTTCCACAAGTCTACTTTT 59.348 36.000 0.00 0.00 33.11 2.27
2107 2195 5.193679 ACAGCTTTTCCACAAGTCTACTTT 58.806 37.500 0.00 0.00 33.11 2.66
2108 2196 4.781934 ACAGCTTTTCCACAAGTCTACTT 58.218 39.130 0.00 0.00 36.45 2.24
2109 2197 4.423625 ACAGCTTTTCCACAAGTCTACT 57.576 40.909 0.00 0.00 0.00 2.57
2110 2198 5.500645 AAACAGCTTTTCCACAAGTCTAC 57.499 39.130 0.00 0.00 0.00 2.59
2224 2646 7.299787 TCATATCATATCTTGCGCTCAATTC 57.700 36.000 9.73 0.00 0.00 2.17
2306 2729 2.030457 CCGCGTCAAACATAAGGCTTAG 59.970 50.000 13.15 7.50 0.00 2.18
2323 2746 0.031449 AAACAATGGGAAACACCGCG 59.969 50.000 0.00 0.00 40.11 6.46
2326 2749 2.608506 GCGGTAAACAATGGGAAACACC 60.609 50.000 0.00 0.00 38.08 4.16
2703 4671 2.049156 CACGCTGAACTCCGAGCA 60.049 61.111 0.00 0.00 34.69 4.26
2749 4718 5.361571 CACTGGAAATGGAATGGAATCATGA 59.638 40.000 0.00 0.00 33.18 3.07
2915 4894 1.198408 CTTACCGCTACATCGCCGATA 59.802 52.381 0.00 0.00 0.00 2.92
2991 4970 0.109597 GCGATGAAGGTGCAAACCTG 60.110 55.000 0.00 0.00 40.59 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.