>input_sequence_60279
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-----ATGGTGGCTGTCAAAATGCTAAAAGATCTTGGACAGGGTGAGAAGCAGTTCCGAGCAGAAGTGCAGACCATTGGA
ATGCTTCAACACATCAATCTTGTTCGTTTGTTTGGGTTCTGTGCTGAGGGAAGTAAAAGATTGCTGGTATACGAGTACAT
GGAGAATGGATCTTTGAGTTCTCATCTGTTTTCGAAGAGTTCTGTAAAATTAATCTGGGAGCTCCGGTACAGTATAGCAC
TTGGAACTGCAAGAGGCTTGGCTTATCTGCATGAGGAATGCAAGGATTGCATCATACACTGCGATATAAAGCCAGATAAT
GTACTCCTTGATGCAGATTTGTGTCCTAAGGTTGCAGACTTTGGTATGGCGAAGCTTCTTTGCCGAGATTTTAGCAGGGC
ACTGACAACAATGCGGGGGGCCATCGGATATCTTGCGCTGGAGTGGATCTCAGGGCTTCCGATCACACATAAGTCTGACG
TTTACATCTACGGAATGATGCTTCTTGAAATCATTTCGGGGCGAAGGAATGTGGAGAAAATCAAGGAAGGGAAGTTCACT
TACTTTCCCATCTTTGCGGCAGT------------------------------CAAGGTGAATGAAGGAGATGTTATGTG
CCTTACTGGATAGTACTCCCTCCGTTCCAAATTACTCGTCGTTGAAATGGATGTATCTAGAACTAAAATACATCTAGATA
CATCCATACGTGCGACAAGTAATTCGGAACGGAGGGAGTAGGTTGGAAGGCGACGCAGATGTGGAGCAGCTGAGCAGAGC
TTGCAGAATCGCATGCTGGTGCATTCAAGATGCTGAGGATCATAGGCCAATGATGGGGCATGTTGTTCGCATGCTAGAGG
GTGTCATGGATGTTGAAGTACCTCCTATTCCGAGGTCGCTGCTGAATTTTGTGGGCATGGAGGATTGCACTCCCTCTACA
GACTTATATAGTCTGTGAAGGACCAAAAGCTTCGTTCCATTTGTCCAG-ATCTACATCAAGAATTAAGT---------TT
GTGTCTTTTGTACTGTAT-TTCCTAAACTGCACTTGTCCCTTATTGGCCAAGTTTCTGAACTGCAATTTGTTA-CTCCCT
CCGTCCGGAAAAACTTGTCATCAAAATGGACAAAAAAGTAG---------------------------------------
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----------------------------------------------------
>chr3B_1_TraesCS3B01G174800
CTTTGACAATATATCCAGAGCAAAGTAGAGAAATTTTGGTTCGGCTTATTCCTGACATACTCCCTCCGTTCCTAAATGTT
TGTCTTTCTAGAGATTTCAACAAGTGACTACATATGGAGCAAAATGAGTGAGTCTACACTCTAAAGTATGTCTATACACA
TCCGTATGTGGTAGTCCATTTGAAATCTCTAAAAAGACAAATATTTAGGAATGGAGGGAGTATATCCCATCTTCTCCGGT
GAAGAGTATTCTGGTGCTTTTCCCAGCTGGATGGGAGTTCATGCA---GATGGAGACTCTCTTATGTTGTTCGATGATGC
GCATCTATATGTATGATTGGATGATAATGGTACGGTCAGTGCTGCTGAACTAGGGGACTGTGTCTCTGTTGTGGTCTGCT
TCACCTAGTGAGCTTGACTTGGTTCCATGCCGTGATGCAGAAAGCATTTGTGTAATACCATACGACAGCACTCAGCCTTA
CTGTTTGAGAGTTACTGCTCCACATTGTCTATCTAATGTCTCCGCTACAAAAGACGATTATTTTCATCAGATCGACGGGG
---TCTATAAATTTCCAGGAAGTCCTTCGTCAGTCAAAGTAAGAAGCAGCAGAGAGTGTGAAACTGTTTGTTTCAATGAC
TGTTCCTGTACTTCATATGCCTTCA------ATGAAACATGCTTACTGTGGTACTGGAAGCTGCACAGA------GTATT
GGTTGTGTCTGGTTCGGAATC------TCGTTTGTATATACGTATGGGTAACCAAGAAAATTCGAAC------------T
CCAAGATTGAAT---TTGTTGTTCTAACAGTGGTAGGTGTCTTGGCCCTCCTCCTGGTTGGTCTGGTTCTCTTGTGGATT
AGTAAAAGAAAGTTATTCGTTGAAAGACTAGTGGATTCCAATAGTGGCCTTACGGTCTTCTCTAATACGCAAATAAAGAA
AGCAACGAGAAATTTCTTGGAAAAACTTGGAGAAGGAGGTTTCGGCTGTGTTTTCAAGGGCACATTACC------AGGTT
CCTCTATGGTGGCTGTCAAAATGCTAAAAGATCTTGGACAGGGTGAGAAGCAGTTCCGAGCAGAAGTGCAGACCATTGGA
ATGCTTCAACACATCAATCTTGTTCGTTTGTTTGGGTTCTGTGCTGAGGGAAGTAAAAGATTGCTGGTATACGAGTACAT
GGAGAATGGATCTTTGAGTTCTCATCTGTTTTCGAAGAGTTCTGTAAAATTAATCTGGGAGCTCCGGTACAGTATAGCAC
TTGGAACTGCAAGAGGCTTGGCTTATCTGCATGAGGAATGCAAGGATTGCATCATACACTGCGATATAAAGCCAGATAAT
GTACTCCTTGATGCAGATTTGTGTCCTAAGGTTGCAGACTTTGGTATGGCGAAGCTTCTTTGCCGAGATTTTAGCAGGGC
ACTGACAACAATGCGGGGGGCCATCGGATATCTTGCGCTGGAGTGGATCTCAGGGCTTCCGATCACACATAAGTCTGACG
TTTACATCTACGGAATGATGCTTCTTGAAATCATTTCGGGGCGAAGGAATGTGGAGAAAATCAAGGAAGGGAAGTTCACT
TACTTTCCCATCTTTGCGGCAGT------------------------------CAAGGTGAATGAAGGAGATGTTATGTG
CCTTACTGGATAGTACTCCCTCCGTTCCAAATTACTCGTCGTTGAAATGGATGTATCTAGAACTAAAATACATCTAGATA
CATCCATACGTGCGACAAGTAATTCGGAACGGAGGGAGTAGGTTGGAAGGCGACGCAGATGTGGAGCAGCTGAGCAGAGC
TTGCAGAATCGCATGCTGGTGCATTCAAGATGCTGAGGATCATAGGCCAATGATGGGGCATGTTGTTCGCATGCTAGAGG
GTGTCATGGATGTTGAAGTACCTCCTATTCCGAGGTCGCTGCTGAATTTTGTGGGCATGGAGGATTGCACTCCCTCTACA
GACTTATATAGTCTGTGAAGGACCAAAAGCTTCGTTCCATTTGTCCAG-ATCTACATCAAGAATTAAGT---------TT
GTGTCTTTTGTACTGTAT-TTCCTAAACTGCACTTGTCCCTTATTGGCCAAGTTTCTGAACTGCAATTTGTTA-CTCCCT
CCGTCCGGAAAAACTTGTCATCAAAATGGACAAAAAAGTAGACTTGTGGAAAAGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGTTTTAAGCCAACGGCT
TCACCTCTTTTATGACACAAAGGCTTGTCCGTTCATCTTCAGAACAATTGAAGTACA-------ACAAGTTTATTTATCT
ATCTGGAATTGAGCGCAAGATATGATATGAATGAATTCTAGTACAGTAGATTTAGTTCCACAGAC-TGCGGTGTTTGCAG
AAACCTAACTAAGCCTTATGTTTGACGCGGTGTTTCCCATTGTTTACCGCAGCAATACAAATGTTTGCAGAAGACAAGGA
TGACAATTATGTCATTTTACCTGTGAGAGT----TACTTGTTAGTATGGTTGTAGATTTTA-------TTTTCCCGATGA
TGCATGGTTGTAGATTCTGGTGAATATTTGAGTAATGACATGGAAGAACAAACAGTACCAAGACATTTCTGGTGAATATT
TGAGTAATGACATAGAAGAACGAACAGTACTCGAA---------------------------------------------
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---------------------------------------------------------------TTCCAGATCGGATCCAT
CCAATCAACTACAGA----------------TAACTCTAAAACGAACAGGAAATAG------------------------
--------------------------TTTCCAAATAAACCGCGTGTCTCAGTATTACAATCAGCATAAAAAGGTTTTATC
CGCTGGTTTTGTAACTTGCATGGTGTAATTTGCTCGGAGTTCAGCGTGACTCCTTCAGAGTCTTATCTTGGAG-CTTTCA
TGATTCCATTCCATTTCCAGTGGTTTTCGGTCAGAAAGTCCTTGATGGAGTCAGACAGGCCAGAC----TCCATATAGCC
ATCAGTCCATGAACCAGAGCAGCTTCTGCTACCTCACTAACTGATATCTGCTCTGTCT------TGCAGGGGAATCTATG
CTGTCCAGCCAGATATCGGCGATGTAGCGGTAAGCCGCCTCCGTCAAGTGGACGCCGTCCCAGAACAGACGAGCAGCCGG
TTTCTCGCACAGGTTTGCACCTTCATCGCCGCAGAAAAGTGTCCCAGGCCCTCCGCAACAAATGGTAAGAACATCTTCTT
CAAACCCTGCAGAATGACAACCATCAACCTTTACCACCACCTACTGCAAACA
>chr3B_234
CTCCCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
GAAAATTATTCTGATGTTTTTCCCAGCTGGATGGGCATTCGTGAA---GATGGAGACTCTTTTCTGCTGCTCAATGATGA
ACATTTATATGTACAATTGGATGACAATGGTACTGTCAGTGCTGCTAAACTAGGGGATTGTGGTTTTGTGATGCCGCCTG
CTTCTCTGGATTGTGGTTTAGAC------TGTGGCA-CTGACAGCATTTGTGTTATTCCATATGACAACACCCAGTCGTA
TTGTTTGAGAGTTGGTGCTCCACACTGTCTATCTAATTCTTCCGCTAAAGAAGACGATTATTTCTATGCTATAGATGGAG
TATTATATGTATCTCCAAGAAGTCCATTACGAGTGGAAGTCACAGGCAGCAGAGAGTGTGAAGCTATGTGTTTAAGTAAC
TGTTCTTGCACTTCATGTGCTTTCCACTTGGAAGGAACATGCTCACTATGGTTCTGGGAACTGCGTGAA------GTAGT
GATTTTGCCTTCTGATCAACGGGGTTATCGTTTGTTTGTACGTATGGCTGAGCAAGAAAATTGGAACTACG-TTCGAATT
CCCGGATTGAAA---TTATTGTTCTAACAGTGATAGGTGTCCTGACTCTCATGCTTGCTGGTCTGGTGCTTTTGTGGAGA
AGCAAAAGAAAGTTATTCATAAAAAGACTTGTGAACTCCAGTAATGGCCTTACGATCTTCTCAAATGCGCAGATAAAAAA
AGCAACAGGAAATTTCTCTGAAAAACTTGGAGAAGGAGGTTTCGGCTGTGTTTTCAAGGGGGCATTGCC------AGGAA
CCTCTCTGGTGGCTGTCAAAAAGCTAAAAGACCTTGGACAGGGGGAGAAGCAATTCCGAGCGGAAGTGCAGACCATTGGA
ATGATTCAACACATTAATCTTGTTCATTTATTTGGTTACTGTGCTGAGGGAAGTAAAAGGTTGCTAGTATATGAGTACAT
GGAGAATGGATCTTTGAACTCTCATCTTTTTTCAAAGCATTCTGTAAAATTAATCTGGGAGATCCGTTACCGCATAGCAC
TTGGAGCAGCAAGAGGCTTGGCTTATCTGCATGAAGAGTGCAAGGATTGCATCATACACTGTGACATGAAGCCAGACAAT
GTACTCCTTGATGCACATTTCTGTCCCAAGATTGCAGACTTTGGTATGGCGAAACTTCTCGGCCGAGATTTCAGCAGGGC
ACTGACGACAATGAGGGGGACCATCGGATATCTTGCACCGGAGTGGATCTCGGGGCTTCCGATCACACGTAAGTCGGATG
TTTACAGCTATGGGATGATGCTTCTTGAAATCATATCGGGGCGACGGAATTCAGAGAAAATTAAGGAGGGGAAGTTTACC
TACTTTCCCATCTTTGCTGCACT------------------------------GAAGGTGAATGAGGGGGATATTATGTG
CCTGTTGGAT----------------------------------------------------------------------
------------------------------------AGT-----------------------------------------
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>chr3A_250
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---------TCTGATGCTTTTCCCAGCTGGATGGACATTCATGAGGAGGATGGAGGCTCTTTTCTGATGTTCAATGATGC
ACATCTGTACCTACAATTGCATGATGATGGTACTGTCAGTGCTGCTAAACTAGGGGACTGTGGTCCGGCGCTGTGGTCTC
AATATAGTCGGTGCGGTAATGCAGCATATTGTGGCC-CAGACAGCATTTGTGTAGTGCCATATGCCGAAATCCGGTCATA
TTGTTTGAGAGTTGCAGCTCCACATTGTCTATCTAATCTTTCCGCTAAACAAGACATCTCTTTTCATCCCATAGATGAAG
TCCT---TGTATTTCCAGAAACTCCGTCGTTGGTGCAGGTCAGAGGCATCAGAGAGTGCGAAGCTATTTGTTCCAGTGAC
TGTTCTTGTACGTCATATGCTTTCA------ATGGAACATGCTTACTGTGGTCTGTGGAGCTGCACAAACTCACTGTAGG
GATCATGCCTGGTTCAGATGG------GCATCTGTACATACGCACGGCTAAGCAAAAAGAAA---------ATTCGGGTT
CCAAGATTGGAA---TTCTTATTCCAACAGTGACGGGTGTTTTGCTCCTCCTCCTTGTTGCTCTGTTTGTTTGGTGGAGA
AGCAAAAGGAAGATATTCACAGAAAGACCAGAGAATTGTAGCGGTGGCCTTATGATCTTCTCGGACGCGCAGATGAAGAA
AGCGACGAGAAATTTCTCTGAAAAACTTGGAGAAGGAGGTTTCGGCTGTGTTTTCAAGGGGACATTGCCAGCAGCAGCTT
CCTCCATGGTGGCTATCAAAAGGCTAAAAGACCTTGGTCAAGGAGAGAAGCAATTCCGAGCCGAAGTGCAAACAATTGGA
ATGATCCAACACATCAATCTTGTCCGTTTATTTGGGTTTTGTGTGGAAAGAAGTACGAGGATGCTGGTATACGAGTACAT
GGAGAACGGATCTTTGAATTCCCATCTGTTTTCCAAGGGTTCTTCAAAATTACCCTGGGAGCTCCGGTACCGCATAGCAC
TCGGAACCGCGAGAGGCCTGGCCTATCTGCACGAGGGGTGCACGGACCGCATTATACACTGCGACATGAAGCCGGACAAC
GTGCTCCTTGACGCAGACTTCTGTCCCAAAATTGCAGACTTTGGCATGGCCAAGCTGCTGGGTCGAGATTTCAGCAGGGC
GCTGACGACGATGCGAGGGACCATCGGATACCTCGCGCCGGAGTGGATCTCGGGGGTTCCGATCACACACAAGTCAGATG
TCTACAGCTACGGCATGATGCTTCTTGAGATCATATCGGGGCGAAGGAACTCGGAGAAAATCAAGGAAGGGGAGTTTACC
TACTTCCCAATCTTTGCTGCGGT------------------------------CAAGGTGAATGAAGGGGATGTTGTGTG
CCTGCTGGAC----------------------------------------------------------------------
------------------------------------AGTA----------------------------------------
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>chr3D_440
--------------------------------------------------------------------------------
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------------------------------------------AGCATTTGTGTAGTGCCATACTATGGCACCCAGTCATA
TTGTATGAGAGGAGCTGCTCCACGTTGTTTCTCTAGTGTTTCCACTAAACAAGACGTTTATTTTCATCCAATAGATGAAG
TACTCTACGTATTTCCAAGAAGTCCTTTGCAAATTGAAGTCACACGTAGCAGAGAGTGCGAAGATATTTGTTTAAGTAAC
TGTTTCTGCACTGCATATGCTTACCTCCATGGCAGAATATGCCCACTATGGTTCTGGGAACTGCCCAAA------GTTGT
GACAAAGTCTTCTGGTCAATGGAGCTATAGTTTGTATGTAAATATGGCTAAGCGAGAAAATTCGAAACCCCATTCGAATT
CCTGGATTGAAA---TTATTGTTCTACTAGTGATAGGTGTCCTGACCCTCATGCTTGTTAGTCTGGTGCTTTGGTGGAGA
AGCAAAAGAAAGTTATTCATAAAAAGACACGTGAACTCCAGTAATGGCCTTACGATCTTCTCAAATGCGCAGATGAAAAA
TGCCACAAGAAATTTCTCTGAAAAACTTGGAGAAGGAGGTTTCGGCTCTGTTTACAAAGGGACAGTGCG------AGGAA
CCTCTATGGTGGTTGTCAAAAAGCTGAAGGGCCTTGGACAAGGGGAGAAGCAATTCCGAGCGGAAGTGCAGACCATTGGA
ATGATTCAACACATCAATCTTGTCCGTTTATTTGGATACTGTGCTGAGGGAAGTAAAAGGTTGCTAGTATACGAGTACAT
GGAGAATGGATCTTTGAACTCTCATCTGTTTTCAAAGAGTTCTATAAAATTAATCTGGGAGATCTGGTACCGCATAGCAC
TTGGAACAGCAAGAGGCTTGGCTTATTTGCATGAAGAGTGCAAGGATTGCATCATACACTGTGACATGAAGCCGGACAAT
GTACTCCTTGATGCAGATTTCTGTCCCAAGATTGCAGACTTTGGTATGGCAAAACTTCTCGGCCGAGATTTCATCAGGGC
ACTGACGACAATGCGGGGGACCATCAGATATCTTGCACCGGAGTGGATCTCAGGTCTTCCAATCACACGTAAGTCGGATG
TTTACAGCTATGGAATGATGCTTCTTGAAATCATATCAGGGCGAAGGAATTCAGAGAAAATTAAGGA-GGGAAATTTACC
TCCTTTCCCATCTTTGCTGCACT------------------------------GAAGGTGAATGAGGGGGACATTATGTG
CCTGTTGGAT----------------------------------------------------------------------
------------------------------------AGTA----------------------------------------
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>chr5B_746
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-------------------------------------------------AAGCAAGAAAAGTCAAAT------------T
CAAAAATTAAAATCGTTGTTCTGATTACAGTGGTAGGTGTGTTTACCATTATGCTTGTTTGCCTTGTTATTTCCTGGAGA
AGGAGAAAGAAGCTATCCCTGGAACTACCATTGAGTTCCAATAGCAGCCTCGAGATCTTTTCCAGCATGCAAATGAAGAA
GGCAACGAATAATTTCTCCGAAAAACTTGGAGAAGGAGGTTTCGGTTGTGTTTACAAGGGGGCATTGGC------AAGTT
TGTCTCTAGTGGCGGTCAAAAAGCTAAAATGCATTGGGCAAGGGGAAAAGCAATTCCGAGCAGAAGTACAGACAATTGGC
ATAATTCACCACATTAATCTTGTCCGATTGTTTGGTTTTTGTGCCGAAGGGCAGAAACGGTTGCTGGTATATGAGTACAT
GGAGAACGGTTCTTTGAGTTCTCATCTGTTTTCGAAGAGTTCGGCCATATTGACCTGGGATCTTCGGTACCATATAGCAC
TTGGAACT-------------------------AGGAATGCAAAGAATGCATTATACACTGTGATGTGAAGCCAGACAAT
GTACTTCTCAATGCAGAGTTCTGCCCCAAGATTGCGGACTTCGGCATGGCGAAGCTTCTTGGTCGAGATTTCAGCAGGGC
TTTGACAACAATGCGAGGGACATCCGGATACCTTGCACCGGAGTGGATATCAGGACTGCCGATCACATGTAAGACTGATG
TTTACAGCTATGGTATGATGCTTCTTGAAATCATATCTGGTCGAAGGAATGCGGAGAAATTTAAGGAAGGGAAGTTCACA
TACTTTCCTATCTTTGCGGCAAT------------------------------CAAGGTGAGTGAAGGAGATGTTATGTG
TCTGCTGGAC----------------------------------------------------------------------
------------------------------------AGTA----------------------------------------
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>chr4A_766
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-CAAGATACAAA---TTGTTATTTCAACAGTGATAGTTGTGTTAACCCTCGTCCTCACTGGTCTAGTTCTTTTGCGGATA
ATCCAGAAGAAGTCATTTATGGACAGACCGGTGAATTCGAACAGCAGCCTCACGATCTTCTCAAACGCCCAGATAAAGAA
AGCTACCGGAAATTTCTCGGTAAAGCTTGGAGAAGGAGGTTTTGGCTGTGTTTTCAAGGGAACATTGCA------AGGTT
CCTCTGTGGTGGCTGTCAAGAAGCTAAAAGAATTTGGACAAGGGGAGAAGCAATTCCGAGCGGAAGTGCAAACGATTGGA
ATGATCCAACACATCAATGTTGTTCGTTTATTTGGATTTTGTGCCGAAGGAAGTAAAAGGCTGCTGGTGTACGAGTACAT
GGAGAATGGATCTTTGAGTTCTCATCTGTTTTCGAAAAGCCCGGCAGCTTTGGGCTGGGAGGTCCGGTACCGGATAGCAC
TTGGAACTGCAAGAGGCTTGGCTTACCTGCATGAGGGATGCACGGACTGTATCATACACTGTGACATGAAGCCGGACAAT
GTACTCCTTGACGCAGATTTCTGTCCTAAGGTTGCAGACTTTGGTTTGGCCAAACTTCTTGGCCGGGATTTTAGCAGGGC
ATTGACAACGATGCGTGGGACCATCGGATACCTTGCGCCGGAGTGGATCTCAGGGCTACCGATCACGCATAAGGCTGATG
CCTACAGCTACGGAATGATGCTTCTTGAAATCGTATCGGGGCGAA----TGCGGAGAAAATCAAACAGGGGAGGTTTACT
TACTTTCCCATCTTTGCTGCAGT------------------------------CAAGGTGAATGAAGGAGATGTTATGTG
CCTGCTGGAC----------------------------------------------------------------------
------------------------------------AG------------------------------------------
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>chr5B_777
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---------------TTGTTATCCTGACAGTGATAGTTGTGTTAACCCTCCTCCTCACTGCTCTAGTTCTTTTGTGGATA
ATTCAGAAGAAGTCGGTTATGGATAGACCGGGGAATTCGAACAGAAGCCTCACGATCTTCTCGAACGCACAAATAAAGAA
GGCTACCAGAAATTTCTCGGTAAAGCTTGGAGAAGGAGGCTTTGGCTGTGTTTTCAAGGGAACATTGCA------AGGCT
CCACTTTGGTGGCTGTCAAGAAGCAAAAAGACTTTGGACAAGGGGAGAAGCAATTCCGAGCGGAAGTGCAGACGATTGGA
ATGATCCAACACATCAATGTTGTTCGTTTATTTGGATTTTGCGCCGAAGGAAGTAAAAGGCTGCTGGTGTATGAGTACAT
GGAGAATGGATCTTTGAGTTCTCATCTGTTTTCGAAAAGCCCGGCAACTTTGGTCTGGGAGCTCCGGTACCGCATAGGAC
TTGGAACTGCAAGAGGCTTGGCTTACCTGCATGAGGGATGCACGGATTGCATCATACACTGCGGCATGAAGCCGGACAAT
GTACTCCTTGACGCAGATTTCTGTCCCAAGGTTGCAGACTTCGGCATGGCCAAACTTCTTGGCCGGGATTTTAGCAGGGC
ATTGACAACGATGCGTGGGACCATCGGATACCTTGCGCCGGAGTGGATCTCAGGGCTACCGATCACACATAAGGCTGATG
TCTACAGCTACGGAATGATGCTACTTGAAATCGTATCAGGGCGAAGGAATGCGGAGAAAATCAAACAGGGGAGGTTTACT
TACTTTCCCATCTTTGCTGCAGT------------------------------GAAGGTGAATGAAGGAGATGTTATGTG
CCTGCTGGAT----------------------------------------------------------------------
------------------------------------AG------------------------------------------
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>chr7A_877
--------------------------------------------------------------------------------
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-----------------------------------TTCCAATAGCGGCCTCAAGATCTTTTCAAACATGCAAATAAAGAA
GGCAACGAAGAATTTCTCCGAAAAACTTGGAGAAGGGGGTTTCGGCTGTGTTTACAAGGGGGAATTGGC------AGGTT
TCTCTCTAGTGGCAGTCAAAAATCTAAAAAGCATCGGACAAGGGGAAAAGGAATTCCGAGCAGAAGTACAGACAATTGGC
ATAATTCACCACATCAATATTGTCCGGTTATTTGGTTTTTGTGCGGAAGGGCTGAAAAGGGTTCTGGTATACGAGTACAT
GGAGAATGGTTCTTTGAGTTCTCATCTGTTTTCAAAGAGTTCGGCCGTATTAACCTGGGATCTCCGGTACCATATTGCAC
TTGGAACTGCAAGAGGCTTGGCTTATCTCCATGAGGAATGTAAAGAATGCATTATACATTGTGACATGAAGCCAGACAAT
GTACTTCTTGATGCAGAGTTCTGCCCCAAGATTGCGGACTTCGGCATGGCCAAGCTTCTAGGTCGAGATTTCAGCAGGGC
TTTGACAACAATGCGAGGGACCATTGGATATCTTGCACCGGAGTGGATATCGGGGTTACCGATCACACATAAGACTGATG
TTTACAGCTATGGCATGATGCTTCTTGAAATCATATCTGGTCGAAGGAACTCAGAGAAAATTAAGGAAGGAAAGTTCACA
TACTTTCCCATCTTTGCGGCAAT------------------------------CAAGGTGAATGAGGGAGATGCTATGTG
TCTGCTGGAC----------------------------------------------------------------------
------------------------------------AGTAGGTTGGAAGGCCAGGCAGATGGAGAGCAGCTGAGCAGAGC
TTGCAGAATTGCATGCTGGTGCATTCAAGATGCTGAGGATGACAGGCCGATGATGGGACAAGTTGTTCACATGCTGGAGA
ATGTCATGGATGTCGAAATCCCACCTACTCCAAGGTCACTTGAACACTATGTTGGCATGGAGGATTGC------------
--------------------------------------------------------------------------------
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>chrUn_877
--------------------------------------------------------------------------------
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-----------------------------------TTCCAATAGCGGCCTCAAGATCTTTTCAAACATGCAAATAAAGAA
GGCAACGAAGAATTTCTCCGAAAAACTTGGAGAAGGGGGTTTCGGCTGTGTTTACAAGGGGGAATTGGA------AGGTT
TCTCTCTAGTGGCAGTCAAAAATCTAAAAAGCATCGGACAAGGGGAAAAGGAATTCCGAGCAGAAGTACAGACAATTGGC
ATAATTCACCACATCAATATTGTCCGGTTATTTGGTTTTTGTGCGGAAGGGCTGAAAAGGGTTCTGGTATACGAGTACAT
GGAGAATGGTTCTTTGAGTTCTCATCTGTTTTCAAAGAGTTCGGCCGTATTAACCTGGGATCTCCGGTACCATATTGCAC
TTGGAACTGCAAGAGGCTTGGCTTATCTCCATGAGGAATGTAAAGAATGCATTATACATTGTGACATGAAGCCAGACAAT
GTACTTCTTGATGCAGAGTTCTGCCCCAAGATTGCGGACTTCGGCATGGCCAAGCTTCTAGGTCGAGATTTCAGCAGGGC
TTTGACAACAATGCGAGGGACCATTGGATATCTTGCACCGGAGTGGATATCGGGGTTACCGATCACACATAAGACTGATG
TTTACAGCTATGGCATGATGCTTCTTGAAATCATATCTGGTCGAAGGAACTCAGAGAAAATTAAGGAAGGAAAGTTCACA
TACTTTCCCATCTTTGCGGCAAT------------------------------CAAGGTGAATGAGGGAGATGCTATGTG
TCTGCTGGAC----------------------------------------------------------------------
------------------------------------AGTA----------------------------------------
--------------------------------------------------------------------------------
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>chr3A_1184
TTTTGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------GAAGAGTTCTGCAAAACTTATCTGGGAGCTCCGGTATAGTATAACAC
TTGGAACTGCAAGAGGCTTGGCTTATCTGCATGAGGAATGCAAGGATTGCATTATACACTGCGACATAAAGCCGGACAAT
GTACTTCTTGATACAAATTTTTGTCCTAAGGTTGCAGACTTCGGTATGGCAAAGCTGCTTGGCTGAGATTTTAGCAGGGC
ACTGACAACAATGCGGGGGACCATCGGATATCTTGCACCGAAGTGAATCTCAGGGCTTCCGATCACACATAAGTCTGACG
TTTACAACTACGGAATGATGCTTCTTGAAATCATTTCGGGGCGAAGGAATGTGGAGAAAATAAAGGAAGGGAAGTTCACT
TACTTTCCCATCTTTGCTGTAGTCAAGGTGAATTAAGGAGATCACCAGCAAAAGAAAGTGAATGAAGGAGATGTCATGTG
CCTATTGGAT----------------------------------------------------------------------
------------------------------------AGTAGGTTGGAAGGCGATGCAGATGTGGAGCAGCTGAGCAGAGC
TTGCAAAATCGCATGCTGGTGCATTCAAGATGCTGAGGATCATAGGCCAATGATGGGGCAAGTTGTTCACATGCTGGAGG
GTGTCATGGATATTGAAGTACCTCCTATTCCGAGGTCGCTGCTGAATTTTGTGGGCATGGAGGATTGCACTCCCTCTACA
GACTTATATAGTCTCTGAAGGGCCAAAAGCTTCGTTCCATCTGTCCAG-ATCTACATCAAGAATTAAGT---------TT
GTCTCTTTTGTACTATAT-TTCCTAAACTGCACTTGTCCCTTATTGGCCAAGGTTCTGAACTACGATTTGTTA-CATTAT
ATA-----------------------------------TAGACTTGTGGAAAAGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGCTTTAAGCC-------
--------TTTATGACACGAAGGCTTGTCCGTTCATCTTCAGAACAATTAAACTACTACTCGGTACAAATTTATTTATTA
GTTATTCCCTCTGTCCCAAAAT----------------------------------------------------------
------------------------------------------------------ATAAGAACGTTTTGACACTATATAGT
GTAAAAACATTCTTATATTTTGGGACGGAGGGAATACTTGTTAGTATGGTTGTAGATTTATTTTCCTCTTTTCCCGATGA
TGCATGGTTGTAGATTCTGGTGAATATTTTAGTTATGGCATGAAAGACTGAACAGTACCAAGACATTTCAGGCTCTAAAA
TATATTACTTTTTTTAAAGATCCGGGGTTTTCGGCTTCATTGATTTAGGAGAAAGCAACGGGAGAACAAGGGGTGATCAA
GCGATCAAGGGTACAAAAGGAGAAACGAAAAGAAGATACAGGTGGCCGGCATTATCCTAGGGCTACTCTCTCGCTACATA
CTCCCCAAAAGGGGGCTCTAGGCATCTTGCTCCCGCCAGTCTCCACAGCTCAAGCGTGTTCCTGATGGCGTGCAGCACGT
GTCGGCGTGGGGCAGCTTGCTGTTGAATACGCATGCGTTTCTCTCCTTCTATATCTCCCAGACTATCAACATCATCAACG
ATTTCAATCCTTTCATGGAGCTTGATGGTGTTAGTTGGACTATTCTTTTCCAGTGGCTGAGGGAGGAGTGGCTCCTTGAT
CTGCTAAGTTGCAATGCTGCACAACCATTCCAGGTGGATGTCGTCTCCCAGATCGAGCGTGATAGTGGGCAATCCCAAAA
GAGGTGAGTAGAACTCTCGAGATTTCTGAGACATAGGGTACAAAAATACCCATTTGGCCACCCGCGCCGCTGCAGGCGAT
CGTTGCACCAAAGTCTGTCTTGGTGAAGTAGCCATGCAAAAATTTTGACGGTTTCGGGGGCCCAGGCCTTCCAGATTGCC
GCCTTGATTCCTGGAGCATCAGCATCGTCAGTTTGCAGCTTGTAGGCAGCACTAGCAGTGTAAGAGTTGCCACCGCCGGC
CACCGAGGCGATCGAGTCTTCATCTGTGGTTAGTGTGATGTTGGCTGTGTGCAGCTTGCGCCACAGCTGCACGTACTGCA
CAACTATTTCACCCGTGTTACCGTGCTGCAAGTCCTGGATCCATTTGTCATTGGCTAGGGCTTCGTGTACTGTCCTGCTC
TTTCCACGCGAGTGCTGAAAAAGAGTTGGAAACTCTTGACAAAGAGCCATTGATCCTAGCCAAGAGCTTGTCCAGAAGCT
GGCGGTCCTTCCGTTGCCCAGCTGAATTGAGGTGGCCGATGCAAAGAGCAGCCGGTCGTCGTGATCGCACGGGACAGGAA
AGTTCATCCAGGGGCTTCGCTGTTGCTACCAGGTGAGCCACGGCCATCTCATCCGCAGGGCAGAACCAAAGCGATGAAGA
TCCAAAATGCCAAGTCCTCCCTTGTCCACCGGCCGACAAACCTTTTCCCAAGCCACTTTGCATTTGGCGCCAGTGATTTT
CTCATCTTGCGCCCAAAGAAACTGTCTGCGGGCCTTGTCCACTTCCTTTAGAATTTTCTTTGGGACCTTGAGGATGGTCA
TGGCAAACACTGGAAGTGCAGTTAACGCCGCACGCACAAGAACGCGCCAGCCCGCCATGCTCATGAGCCATCCCTTCCAC
CCCGCCAGTCTAGCATGAATTCGATCAATTGTGAATTGGAAGTGCACCAGCCGCAATTTCCGCGTGGAGATTGGCAGGCC
GAGGTAGGTGGTTGGGAAGGAGGATTGCTGCCCTTCGAAGCTTGCCATGTTGTAATCTGGAAAC-CCATATCAGATCCAT
CCAATGAACTTCAGA----------------TAACTCCAAAACAAACAGAAACTACTCCCTCCATAGCTTGCAAAACATC
TTATATTGTGGGACGGAGGGAGTAGTTTCCAGAATAAAGTGTGGGTCTCGGTGTTACAATAAGC---AAAAGGTTTTATC
CTCTGGTTTTGTAACTTGTATGGTGTAATTCGCTCAGAGTTCAGCGTGACTCCTAAAGAGTCATCTTGGAGCTTCTTCCA
TGATTCCATTTCATTTCCATTGCTTTT---TCAGAAAGTCCTCAAGGGAGTAAGACAAGC--------------------
--CAGTCCATGAATCAGAGCAGCTTCTGCTACCTCACTAACTAATATCTGCTCTGTAT------TGCAGGGGAGTCCATG
CTGTCCAGCCAGACATCGGCGATGTAGTGGTAAGCCGCCTCCGTCAAGTGGACGCCGTCCTAGAACAGACAAGCAGCCGG
TTTCTCACATAGGTTTGCACCTTCATCACCACAGAAAAGTGTCCCAGGCCCTCCGCAACAGATGGTAAGAACATCTTC--
-AAACCCTGGAGAATGACAACCATCAACCTTTACCACCACCTACTACAAACA
>chr3B_1778
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------------ATGCTGGTGCATTCAAGATGCTGAGGATCAAAGGCCAATGATGGGGCAAGTTGTTCGCATGCTAGAGG
GTGTCATGGATGTTGAAGTACCTCCTATTCCGAGGTCGCTGCTGAATTTTGTGGGCATGGAGGATTGCACTCCCTCTACA
GACTTATATAGTCTCTGAAGGACCAAAAGCTTCGTTCCATTTGTCCAGGATCTACATCAAGAATTAAGT---------TT
GTGTCTTTTGTACTGTATTTTCCTGAACTGCACTTGCCCCTTATTGACCAAGGTTCTGAACTGCAATTTGTTA-CATTAT
ATA-----------------------------------TAGACTTGTGGAAAAGC-------------------------
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--------------------------------------------------------------TGTTTTAAGCCAACGGCT
TCACCTCTTTTATGACACAAAGGCTTGTCCGTTCATCTTCAGAACAACTAAAGTACA-------ACAAGTTTATTTATCT
ATCTGAAATTGAGCGCAAGATATGATATGAATGAATTCTAGTACAGTAGATTTAGTTCCACAGAC-TGCGATTTTTGCAG
AAACCTAATTAAGCCTTATGTTTGAAGCAGGGTTTCCCATTGTTTACCGCAGCAATACAAATGTTTGCAGAAGACAAGGA
TGACAATTGTGTCATTTTACCTGTGAGAGT----TACTTGTTAGTATGGTTGTAGATTTTA-------TTTTCCCGATGA
TGCATGGTTGTAGATTCTGGTGAATATTTGAGTAATGACATGGAAGAACAAACAGTACCAAGACATTTCTGGTGAATATT
TGAGTAATGACATAGAAGAACGAACAGTACTCGAA---------------------------------------------
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---------------------------------------------------------------TTCCAGATCGGATCCAT
CCAATCAACTACAGA----------------TAACTCTAAAACGAACAGGAAATAG------------------------
--------------------------TTTCCAAATAAACCGCGTGTCTCAGTATTAGAATCAGCATAAAAATGTTTTATC
CGCTGGTTTTGTAACTTGCATGGTGTAATTCGCTCGGAGTTCAGCGTGACTCCTTCAGAGTCTTATCTTGGAG-CTTCCA
TGATTCCATTCCATTTCCAGTGGTTTTCGGTCAGAAAGTCCTTGATGGAGTCAGACAGGCCAGACTCGATCCATATAGCC
ATCAGTCCATGAACCAGAGCAGCTTCTGCTACCTCACTAACTGATATCTGCTCTGTCT------TGCAGGGGAGTCTATG
CTGTCCAGCCAGACATCGGCAATGTAGCGGTAAGCCGCCTCCGTCAAGTGGACGCCATCCCAGAACAGACGAGCAGCCGG
TTTCTCGCATAGGTTTGCACCTTCATCGCCGCAGAAAAGTGTCCCAGGCCCTCCGCAACAAACGGTAAGAACATCTTCTT
CAAACCCTGCAGAATGACAACCATCAACCTTTACCACCACCTACTGCAAACA
>chr3B_1937
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-------------TCTGGAAGGCCAAAAGCTTCGTTCTATTTGTCCAG-ATCTACATCAAGAATTAAGTGTTCAGAGTTC
GTGTCTCTTATATTTTCTA----TAAACTGCACTTGTCCCTTATTGGCCAAGGTTCTGAACTACAATTTGTTATCATTAT
ATA-----------------------------------TAGACTAGTGATGCAGTAAGGGACGTTGTTAAACTGAACTCG
GGTGAACAGTAAAATCAAAATAAATGAAAAAATGGATGTCTTTTGTAGAAAACATTGAAAAATATTTTGATAGGTTGCAA
AGTTTCAATATCGAATGAGATTTGTGGAAAACGTGACAAAAAATCGATGCTCCAAATGTGTTATTTTCAAAAGCATTTTG
GAGCATTGAATTTTTTTGCCATGTCTTCCACGAATATCATTTCGTGATGAAACTTTGCAAGCAATTTGTCATGTTTGCTC
GAAAAAAACCAGTTATTTTTTCTTAATTTTACTGTTCACTCGAGCTCACAAAAGCACTTTCGTGCTTTAAGCAC----CT
TCACCTCTTTCTCTGC---------TGACCGTTCATCTTCTTGACAATTAAACAGTAATCCTAATATATT---------T
ATCTGAAGTTGAGCTCAAGATATGACGTGAATGGATTCTAGCAGATTTATGTACTGCACTGCAGATTGCGGTGTTTGCGT
AAACCAAATTAACCCTTATGTTTGAACAATTGTCTTCCATGGTTTACTGCAGCAATACAAACATTTGCAGAATATAAAGA
TCGTAGTTATGTCATTTGCCCTGTGTGAAAATTACT-TGGTCAGTTTGATTGTAGTTTTTCATCGG---------GATGA
TGTATGGTTGTATATTCTCCTGAATATCTAAGCAATGTCATGAAAGACTGAACAATATGATGACATTTCTGACTCTAAAA
TATACTGTATTACTCAAC--------------------------------------------------------------
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------------------------------------------------GTTGTAATCAAGAATTTCCAGATCAGATCCAT
CCGATCAACTTCACCGACAAACTTCCGAATCTAGCTCCAAAAAGAACAACAAGAGG------------------------
--------------------------TTTCCAAAATAAA-----------------------------------------
--------------------------------------------------------------------------CTTGCA
TGCTTCCATTTCAATTCCAGTGTTTTTCAGT-------------------TCAGACAGGCCAGAC----TTCAGATAGCT
ATCAGTCCATGAATCAGGGCAGCTTCTGCTACCTCACTAACTGATACCTGCTCTCTCTTGCAGTTGCAGGGGAGTCTATG
CTGCCCAGCCAGCCATCGGCGATGTAGCGGTAAGCCGCCTCCGTCAAGTGCGCGACATCCCAGAACAGACGAGCAGCCGG
TTTCTCACATACATGTGCACCTTGGTCGCCGCAGATAAGTGCCCCAGGCCCTCCGCAACAGTTGGTAAGAACA---TCTT
CAAACCCTGCAGAATGACAACCATCAACTTTGACC-----------------
>chr3B_1937
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-------------TCTGGAAGGCCAAAAGCTTCGTTCTATTTGTCCAG-ATCTACATCAAGAATTAAGTGTTCAGAGTTC
GTGTCTCTTATATTTTCTA----TAAACTGCACTTGTCCCTTATTGGCCAAGGTTCTGAACTACAATTTGTTATCATTAT
ATA-----------------------------------TAGACTAGTGATGCAGTAAGGGACGTTGTTAAACTGAACTCG
GGTGAACAGTAAAATCAAAATAAATGAAAAAATGGATGTCTTTTGTAGAAAACATTGAAAAATATTTTGATAGGTTGCAA
AGTTTCAATATCGAATGAGATTTGTGGAAAACGTGACAAAAAATCGATGCTCCAAATGTGTTATTTTCAAAAGCATTTTG
GAGCATTGAATTTTTTTGCCATGTCTTCCACGAATATCATTTCGTGATGAAACTTTGCAAGCAATTTGTCATGTTTGCTC
GAAAAAAACCAGTTATTTTTTCTTAATTTTACTGTTCACTCGAGCTCACAAAAGCACTTTCGTGCTTTAAGCAC----CT
TCACCTCTTTCTCTGC---------TGACCGTTCATCTTCTTGACAATTAAACAGTAATCCTAATATATT---------T
ATCTGAAGTTGAGCTCAAGATATGACGTGAATGGATTCTAGCAGATTTATGTACTGCACTGCAGATTGCGGTGTTTGCGT
AAACCAAATTAACCCTTATGTTTGAACAATTGTCTTCCATGGTTTACTGCAGCAATACAAACATTTGCAGAATATAAAGA
TCGTAGTTATGTCATTTGCCCTGTGTGAAAATTACT-TGGTCAGTTTGATTGTAGTTTTTCATCGG---------GATGA
TGTATGGTTGTATATTCTCCTGAATATCTAAGCAATGTCATGAAAGACTGAACAATATGATGACATTTCTGACTCTAAAA
TATACTGTATTACTCAAC--------------------------------------------------------------
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------------------------------------------------GTTGTAATCAAGAATTTCCAGATCAGATCCAT
CCGATCAACTTCACCGACAAACTTCCGAATCTAGCTCCAAAAAGAACAACAAGAGG------------------------
--------------------------TTTCCAAAATAAA-----------------------------------------
--------------------------------------------------------------------------CTTGCA
TGCTTCCATTTCAATTCCAGTGTTTTTCAGT-------------------TCAGACAGGCCAGAC----TTCAGATAGCT
ATCAGTCCATGAATCAGGGCAGCTTCTGCTACCTCACTAACTGATACCTGCTCTCTCTTGCAGTTGCAGGGGAGTCTATG
CTGCCCAGCCAGCCATCGGCGATGTAGCGGTAAGCCGCCTCCGTCAAGTGCGCGACATCCCAGAACAGACGAGCAGCCGG
TTTCTCACATACATGTGCACCTTGGTCGCCGCAGATAAGTGCCCCAGGCCCTCCGCAACAGTTGGTAAGAACA---TCTT
CAAACCCTGCAGAATGACAACCATCAACTTTGACC-----------------
>SNPs
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---S-S-------S---------------------SS------S----------------S--S--S-----S-------
S------------SS------------------S------------S---------------SS-----SS--SSS-SSS
SSS-SSS-S-SSS-S-SS---SSS-SSSSSSSS-SSS----S--------------S--------------S---S-S--
S------------S-------------------------S-------S-S------------------SS--S--S--S-
--------SS--------------------S---SS----S---S-----------------S--S---------S----
--------------------S-------------S-----------------S----S---------S----------S-
-S--S----------S----S--------------------------S---S----------------------------
-----------S--------------------------------S----------S--------------S--------S
------------------S-S------------S--------------------S-------S-----------------
-----------------S------------------------------------------S-----S-------------
---------------------S---------S-----------S--------S---------------------------
---S-------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------S---------------------------------------S-------------------
-------------------S------------------S-----------------------------------------
------S-------------------------------------------------------------------------
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---SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S--------------------------
------------------------------------------------------------S-------------------
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--------------S-----------------------------------------------------------------
----------------------------------------------------S----------------------SSSS-
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------
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-------------------------------------------------S------------------------------
-----S--------------------------------------------------------------------------
--------S----------------S--S---------------------------------------------------
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------------------------------S----------------------------------------------S--
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-------------------------------------------------------------------------S------
-------------S------------------------------------------------------------------
---------S----------------------------------------------------------------------
----------------------------------------------------
>forward_708
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------------------------------------------------TGGTACTGGAAGCTGCACAG------------
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>reverse_2746
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-------------------------CGCGGTGTTTCCCATTGTTT-----------------------------------
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----------------------------------------------------
