Multiple sequence alignment - TraesCS3B01G166100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G166100 chr3B 100.000 4251 0 0 1 4251 166504519 166500269 0.000000e+00 7851.0
1 TraesCS3B01G166100 chr3B 100.000 30 0 0 2555 2584 111509734 111509705 5.940000e-04 56.5
2 TraesCS3B01G166100 chr3D 89.802 2883 118 69 600 3383 114335257 114338062 0.000000e+00 3533.0
3 TraesCS3B01G166100 chr3D 87.056 394 37 6 33 422 114334764 114335147 2.350000e-117 433.0
4 TraesCS3B01G166100 chr3D 86.111 180 15 2 3382 3551 114338484 114338663 7.260000e-43 185.0
5 TraesCS3B01G166100 chr3D 100.000 37 0 0 3575 3611 114338648 114338684 7.630000e-08 69.4
6 TraesCS3B01G166100 chr3A 86.317 2748 163 87 734 3324 110332422 110335113 0.000000e+00 2795.0
7 TraesCS3B01G166100 chr3A 83.607 427 50 10 6 421 110331865 110332282 2.400000e-102 383.0
8 TraesCS3B01G166100 chr3A 86.957 276 33 3 3641 3915 532848968 532849241 1.480000e-79 307.0
9 TraesCS3B01G166100 chr1B 89.098 266 26 3 3649 3913 263981672 263981409 1.140000e-85 327.0
10 TraesCS3B01G166100 chr1B 87.654 162 15 5 2368 2527 199664233 199664075 2.610000e-42 183.0
11 TraesCS3B01G166100 chr1B 76.111 360 57 25 2185 2520 645095723 645096077 1.220000e-35 161.0
12 TraesCS3B01G166100 chr1B 81.761 159 25 4 2363 2519 644311129 644311285 3.450000e-26 130.0
13 TraesCS3B01G166100 chr1A 87.273 275 33 2 3643 3917 212016333 212016605 3.190000e-81 313.0
14 TraesCS3B01G166100 chr1A 87.349 166 16 5 2368 2531 151874644 151874482 7.260000e-43 185.0
15 TraesCS3B01G166100 chr1A 74.807 389 62 26 998 1353 151877293 151876908 4.430000e-30 143.0
16 TraesCS3B01G166100 chr5D 87.085 271 32 3 3644 3913 404471070 404470802 1.920000e-78 303.0
17 TraesCS3B01G166100 chr6D 87.037 270 31 3 3649 3915 316102365 316102097 6.910000e-78 302.0
18 TraesCS3B01G166100 chr1D 86.842 266 32 3 3649 3912 286089264 286089000 1.160000e-75 294.0
19 TraesCS3B01G166100 chr1D 75.260 384 59 25 998 1348 139143190 139143570 2.650000e-32 150.0
20 TraesCS3B01G166100 chr6B 85.921 277 34 3 3640 3913 134392183 134392457 1.500000e-74 291.0
21 TraesCS3B01G166100 chr4A 86.567 268 31 4 3649 3915 395026240 395025977 1.500000e-74 291.0
22 TraesCS3B01G166100 chr2D 85.978 271 34 2 3649 3915 627957312 627957582 1.930000e-73 287.0
23 TraesCS3B01G166100 chr7A 89.796 49 1 3 2537 2584 699290705 699290750 4.590000e-05 60.2
24 TraesCS3B01G166100 chr7A 100.000 30 0 0 2555 2584 699290727 699290756 5.940000e-04 56.5
25 TraesCS3B01G166100 chr7B 100.000 28 0 0 2555 2582 58744053 58744026 8.000000e-03 52.8
26 TraesCS3B01G166100 chr2B 100.000 28 0 0 2553 2580 334383887 334383914 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G166100 chr3B 166500269 166504519 4250 True 7851.0 7851 100.00000 1 4251 1 chr3B.!!$R2 4250
1 TraesCS3B01G166100 chr3D 114334764 114338684 3920 False 1055.1 3533 90.74225 33 3611 4 chr3D.!!$F1 3578
2 TraesCS3B01G166100 chr3A 110331865 110335113 3248 False 1589.0 2795 84.96200 6 3324 2 chr3A.!!$F2 3318

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
403 412 0.029834 GTATACGTCGTCCGCATGGT 59.970 55.0 0.00 0.00 41.42 3.55 F
561 588 0.036732 TGTCGCCAGCAAGGAATTCT 59.963 50.0 5.23 0.00 41.22 2.40 F
647 674 0.166597 TCCGCGTACGTACTGAAGTG 59.833 55.0 22.55 13.26 37.70 3.16 F
2503 2654 0.039798 TCCTTCTTCGTCAACGTCGG 60.040 55.0 2.09 0.00 40.80 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1709 1775 0.035739 TCGTGTTTTAGGGACCTGGC 59.964 55.0 0.0 0.0 0.00 4.85 R
2478 2629 0.038526 TTGACGAAGAAGGAGTCGGC 60.039 55.0 0.0 0.0 45.74 5.54 R
2632 2792 0.098376 GCAACAGCAGTAGCAGCATC 59.902 55.0 0.0 0.0 45.49 3.91 R
3907 4585 0.034198 TCTCGGGATGTGCGTTGAAA 59.966 50.0 0.0 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.511545 GGCCCATCTAGAACGTGAGATTATT 60.512 44.000 0.00 0.00 29.73 1.40
27 28 5.406780 GCCCATCTAGAACGTGAGATTATTG 59.593 44.000 0.00 0.00 29.73 1.90
29 30 6.986817 CCCATCTAGAACGTGAGATTATTGTT 59.013 38.462 0.00 0.00 29.73 2.83
38 39 5.411669 ACGTGAGATTATTGTTCTTGGGTTC 59.588 40.000 0.00 0.00 0.00 3.62
63 64 6.508563 CGCAAGCGATAAATATAGGCATACAG 60.509 42.308 9.11 0.00 42.83 2.74
81 82 0.243907 AGCACACGTTATCTGCGTCT 59.756 50.000 0.00 0.00 40.90 4.18
153 154 0.734889 CCCGTTCATGCAGTCCATTC 59.265 55.000 0.00 0.00 29.71 2.67
184 185 1.084289 GAAGGAAATGAACCCGGACG 58.916 55.000 0.73 0.00 0.00 4.79
185 186 0.322187 AAGGAAATGAACCCGGACGG 60.322 55.000 0.73 3.25 37.81 4.79
186 187 1.196104 AGGAAATGAACCCGGACGGA 61.196 55.000 13.13 0.00 37.50 4.69
209 210 6.179906 ACATATTATCCTTGTGGTCCTCTG 57.820 41.667 0.00 0.00 34.23 3.35
234 239 3.923017 AGTGCTGCACAAGTATTTTCC 57.077 42.857 31.90 3.00 36.74 3.13
236 241 4.651778 AGTGCTGCACAAGTATTTTCCTA 58.348 39.130 31.90 0.00 36.74 2.94
238 243 5.711976 AGTGCTGCACAAGTATTTTCCTATT 59.288 36.000 31.90 4.95 36.74 1.73
239 244 6.030228 GTGCTGCACAAGTATTTTCCTATTC 58.970 40.000 26.70 0.00 34.08 1.75
241 246 6.127925 TGCTGCACAAGTATTTTCCTATTCTG 60.128 38.462 0.00 0.00 0.00 3.02
242 247 6.194796 TGCACAAGTATTTTCCTATTCTGC 57.805 37.500 0.00 0.00 0.00 4.26
243 248 5.945784 TGCACAAGTATTTTCCTATTCTGCT 59.054 36.000 0.00 0.00 0.00 4.24
249 255 6.352516 AGTATTTTCCTATTCTGCTGGAGTG 58.647 40.000 0.00 0.00 0.00 3.51
276 285 3.361977 ACCACGCCACGGCAAATC 61.362 61.111 9.11 0.00 42.06 2.17
282 291 4.114997 CCACGGCAAATCCACGGC 62.115 66.667 0.00 0.00 34.01 5.68
299 308 3.820467 CACGGCATTATTGGTCCATGTAT 59.180 43.478 0.00 0.00 0.00 2.29
300 309 5.000591 CACGGCATTATTGGTCCATGTATA 58.999 41.667 0.00 0.00 0.00 1.47
301 310 5.647658 CACGGCATTATTGGTCCATGTATAT 59.352 40.000 0.00 0.00 0.00 0.86
302 311 6.821160 CACGGCATTATTGGTCCATGTATATA 59.179 38.462 0.00 0.00 0.00 0.86
303 312 6.821665 ACGGCATTATTGGTCCATGTATATAC 59.178 38.462 5.89 5.89 0.00 1.47
304 313 7.047891 CGGCATTATTGGTCCATGTATATACT 58.952 38.462 13.89 0.00 0.00 2.12
305 314 8.201464 CGGCATTATTGGTCCATGTATATACTA 58.799 37.037 13.89 1.51 0.00 1.82
314 323 9.487442 TGGTCCATGTATATACTATTATGCTCA 57.513 33.333 13.89 5.25 0.00 4.26
328 337 3.788227 ATGCTCAGTGTTTAAGACCCA 57.212 42.857 0.00 0.00 0.00 4.51
329 338 2.846193 TGCTCAGTGTTTAAGACCCAC 58.154 47.619 0.00 0.00 0.00 4.61
331 340 3.211045 GCTCAGTGTTTAAGACCCACAA 58.789 45.455 0.00 0.00 0.00 3.33
348 357 3.434167 CCACAAGTATCTTGCCTGGCTAT 60.434 47.826 21.03 12.83 0.00 2.97
349 358 4.202441 CACAAGTATCTTGCCTGGCTATT 58.798 43.478 21.03 5.65 0.00 1.73
362 371 4.679662 CCTGGCTATTCAAGAGCATTTTG 58.320 43.478 6.32 0.00 41.98 2.44
382 391 3.230134 TGCAGGTATTGGCAAAAAGACT 58.770 40.909 3.01 0.00 37.03 3.24
397 406 1.203928 AGACTCGTATACGTCGTCCG 58.796 55.000 29.07 15.66 39.60 4.79
403 412 0.029834 GTATACGTCGTCCGCATGGT 59.970 55.000 0.00 0.00 41.42 3.55
413 422 0.398696 TCCGCATGGTGGTAACTTGT 59.601 50.000 0.00 0.00 34.40 3.16
422 431 6.183360 GCATGGTGGTAACTTGTAAGCAATAT 60.183 38.462 0.00 0.00 33.65 1.28
423 432 6.995511 TGGTGGTAACTTGTAAGCAATATC 57.004 37.500 0.00 0.00 33.65 1.63
454 481 3.486383 TGACCAAGATTGAAAGTGACCC 58.514 45.455 0.00 0.00 0.00 4.46
455 482 2.820197 GACCAAGATTGAAAGTGACCCC 59.180 50.000 0.00 0.00 0.00 4.95
460 487 1.933853 GATTGAAAGTGACCCCGATCG 59.066 52.381 8.51 8.51 0.00 3.69
461 488 0.036765 TTGAAAGTGACCCCGATCGG 60.037 55.000 27.65 27.65 0.00 4.18
462 489 1.814169 GAAAGTGACCCCGATCGGC 60.814 63.158 29.12 15.71 0.00 5.54
463 490 3.325201 AAAGTGACCCCGATCGGCC 62.325 63.158 29.12 18.77 0.00 6.13
465 492 3.861797 GTGACCCCGATCGGCCAT 61.862 66.667 29.12 15.46 0.00 4.40
473 500 2.730733 GATCGGCCATCGCTCTGA 59.269 61.111 2.24 0.00 39.05 3.27
474 501 1.068083 GATCGGCCATCGCTCTGAA 59.932 57.895 2.24 0.00 39.05 3.02
475 502 0.943359 GATCGGCCATCGCTCTGAAG 60.943 60.000 2.24 0.00 39.05 3.02
476 503 2.374830 ATCGGCCATCGCTCTGAAGG 62.375 60.000 2.24 0.00 38.52 3.46
492 519 2.270527 GGCTGAAGGCTCTGACCC 59.729 66.667 0.00 0.00 41.46 4.46
494 521 1.376466 GCTGAAGGCTCTGACCCAA 59.624 57.895 0.00 0.00 38.06 4.12
495 522 0.676151 GCTGAAGGCTCTGACCCAAG 60.676 60.000 0.00 0.00 38.06 3.61
514 541 5.221048 CCCAAGTAAGTTTTCTGGAAGTGTG 60.221 44.000 0.00 0.00 33.76 3.82
517 544 5.990668 AGTAAGTTTTCTGGAAGTGTGACT 58.009 37.500 0.00 0.00 33.76 3.41
526 553 4.160439 TCTGGAAGTGTGACTATGATGGAC 59.840 45.833 0.00 0.00 33.76 4.02
539 566 8.950210 TGACTATGATGGACTTTCAAGATTTTC 58.050 33.333 0.00 0.00 0.00 2.29
546 573 5.007626 TGGACTTTCAAGATTTTCTGTGTCG 59.992 40.000 0.00 0.00 0.00 4.35
547 574 4.848757 ACTTTCAAGATTTTCTGTGTCGC 58.151 39.130 0.00 0.00 0.00 5.19
548 575 3.896648 TTCAAGATTTTCTGTGTCGCC 57.103 42.857 0.00 0.00 0.00 5.54
549 576 2.844946 TCAAGATTTTCTGTGTCGCCA 58.155 42.857 0.00 0.00 0.00 5.69
550 577 2.807967 TCAAGATTTTCTGTGTCGCCAG 59.192 45.455 0.00 0.00 0.00 4.85
551 578 1.160137 AGATTTTCTGTGTCGCCAGC 58.840 50.000 0.00 0.00 32.32 4.85
552 579 0.874390 GATTTTCTGTGTCGCCAGCA 59.126 50.000 0.00 0.00 32.32 4.41
553 580 1.266718 GATTTTCTGTGTCGCCAGCAA 59.733 47.619 0.00 0.00 32.32 3.91
554 581 0.662619 TTTTCTGTGTCGCCAGCAAG 59.337 50.000 0.00 0.00 32.32 4.01
555 582 1.165907 TTTCTGTGTCGCCAGCAAGG 61.166 55.000 0.00 0.00 41.84 3.61
556 583 2.031012 CTGTGTCGCCAGCAAGGA 59.969 61.111 0.00 0.00 41.22 3.36
557 584 1.597854 CTGTGTCGCCAGCAAGGAA 60.598 57.895 0.00 0.00 41.22 3.36
558 585 0.957395 CTGTGTCGCCAGCAAGGAAT 60.957 55.000 0.00 0.00 41.22 3.01
559 586 0.537143 TGTGTCGCCAGCAAGGAATT 60.537 50.000 0.00 0.00 41.22 2.17
560 587 0.169009 GTGTCGCCAGCAAGGAATTC 59.831 55.000 0.00 0.00 41.22 2.17
561 588 0.036732 TGTCGCCAGCAAGGAATTCT 59.963 50.000 5.23 0.00 41.22 2.40
562 589 1.277842 TGTCGCCAGCAAGGAATTCTA 59.722 47.619 5.23 0.00 41.22 2.10
563 590 2.290008 TGTCGCCAGCAAGGAATTCTAA 60.290 45.455 5.23 0.00 41.22 2.10
564 591 2.747446 GTCGCCAGCAAGGAATTCTAAA 59.253 45.455 5.23 0.00 41.22 1.85
565 592 2.747446 TCGCCAGCAAGGAATTCTAAAC 59.253 45.455 5.23 0.00 41.22 2.01
566 593 2.159379 CGCCAGCAAGGAATTCTAAACC 60.159 50.000 5.23 0.00 41.22 3.27
567 594 2.159379 GCCAGCAAGGAATTCTAAACCG 60.159 50.000 5.23 0.00 41.22 4.44
568 595 3.343617 CCAGCAAGGAATTCTAAACCGA 58.656 45.455 5.23 0.00 41.22 4.69
569 596 3.756434 CCAGCAAGGAATTCTAAACCGAA 59.244 43.478 5.23 0.00 41.22 4.30
570 597 4.217550 CCAGCAAGGAATTCTAAACCGAAA 59.782 41.667 5.23 0.00 41.22 3.46
571 598 5.278758 CCAGCAAGGAATTCTAAACCGAAAA 60.279 40.000 5.23 0.00 41.22 2.29
572 599 6.212955 CAGCAAGGAATTCTAAACCGAAAAA 58.787 36.000 5.23 0.00 0.00 1.94
573 600 6.143919 CAGCAAGGAATTCTAAACCGAAAAAC 59.856 38.462 5.23 0.00 0.00 2.43
574 601 5.980715 GCAAGGAATTCTAAACCGAAAAACA 59.019 36.000 5.23 0.00 0.00 2.83
575 602 6.477360 GCAAGGAATTCTAAACCGAAAAACAA 59.523 34.615 5.23 0.00 0.00 2.83
576 603 7.010645 GCAAGGAATTCTAAACCGAAAAACAAA 59.989 33.333 5.23 0.00 0.00 2.83
577 604 8.874816 CAAGGAATTCTAAACCGAAAAACAAAA 58.125 29.630 5.23 0.00 0.00 2.44
578 605 8.415192 AGGAATTCTAAACCGAAAAACAAAAC 57.585 30.769 5.23 0.00 0.00 2.43
579 606 8.035984 AGGAATTCTAAACCGAAAAACAAAACA 58.964 29.630 5.23 0.00 0.00 2.83
580 607 8.657729 GGAATTCTAAACCGAAAAACAAAACAA 58.342 29.630 5.23 0.00 0.00 2.83
583 610 7.439204 TCTAAACCGAAAAACAAAACAATCG 57.561 32.000 0.00 0.00 0.00 3.34
584 611 7.028361 TCTAAACCGAAAAACAAAACAATCGT 58.972 30.769 0.00 0.00 0.00 3.73
585 612 8.180267 TCTAAACCGAAAAACAAAACAATCGTA 58.820 29.630 0.00 0.00 0.00 3.43
586 613 7.578169 AAACCGAAAAACAAAACAATCGTAA 57.422 28.000 0.00 0.00 0.00 3.18
587 614 7.758613 AACCGAAAAACAAAACAATCGTAAT 57.241 28.000 0.00 0.00 0.00 1.89
588 615 8.853469 AACCGAAAAACAAAACAATCGTAATA 57.147 26.923 0.00 0.00 0.00 0.98
589 616 9.465985 AACCGAAAAACAAAACAATCGTAATAT 57.534 25.926 0.00 0.00 0.00 1.28
590 617 8.907685 ACCGAAAAACAAAACAATCGTAATATG 58.092 29.630 0.00 0.00 0.00 1.78
591 618 8.907685 CCGAAAAACAAAACAATCGTAATATGT 58.092 29.630 0.00 0.00 0.00 2.29
592 619 9.706996 CGAAAAACAAAACAATCGTAATATGTG 57.293 29.630 0.00 0.00 0.00 3.21
595 622 8.447787 AAACAAAACAATCGTAATATGTGAGC 57.552 30.769 0.00 0.00 0.00 4.26
596 623 6.551736 ACAAAACAATCGTAATATGTGAGCC 58.448 36.000 0.00 0.00 0.00 4.70
597 624 6.150307 ACAAAACAATCGTAATATGTGAGCCA 59.850 34.615 0.00 0.00 0.00 4.75
598 625 6.942532 AAACAATCGTAATATGTGAGCCAT 57.057 33.333 0.00 0.00 37.58 4.40
633 660 2.720590 CGTAGAAAACACACATTCCGCG 60.721 50.000 0.00 0.00 0.00 6.46
641 668 0.523072 ACACATTCCGCGTACGTACT 59.477 50.000 22.55 0.48 37.70 2.73
647 674 0.166597 TCCGCGTACGTACTGAAGTG 59.833 55.000 22.55 13.26 37.70 3.16
658 685 3.137687 TGAAGTGCTCAGACGGCA 58.862 55.556 0.00 0.00 37.36 5.69
667 694 1.406887 GCTCAGACGGCAGGGATTAAA 60.407 52.381 0.00 0.00 0.00 1.52
721 750 2.622011 GCGAAACGGCAACCCATGA 61.622 57.895 0.00 0.00 0.00 3.07
722 751 1.933115 GCGAAACGGCAACCCATGAT 61.933 55.000 0.00 0.00 0.00 2.45
724 753 1.173043 GAAACGGCAACCCATGATGA 58.827 50.000 0.00 0.00 0.00 2.92
725 754 0.887933 AAACGGCAACCCATGATGAC 59.112 50.000 0.00 0.00 0.00 3.06
726 755 0.251121 AACGGCAACCCATGATGACA 60.251 50.000 0.00 0.00 0.00 3.58
728 757 0.677731 CGGCAACCCATGATGACACT 60.678 55.000 0.00 0.00 0.00 3.55
730 759 2.292267 GGCAACCCATGATGACACTAG 58.708 52.381 0.00 0.00 0.00 2.57
737 770 2.323059 CATGATGACACTAGCGATCCG 58.677 52.381 0.00 0.00 0.00 4.18
757 790 0.745486 TGCCATTGGTGCTCGATCTG 60.745 55.000 4.26 0.00 0.00 2.90
842 879 2.487625 GGCTGTACTTGTACCAACCCAA 60.488 50.000 8.25 0.00 0.00 4.12
843 880 3.215975 GCTGTACTTGTACCAACCCAAA 58.784 45.455 8.25 0.00 0.00 3.28
844 881 3.004002 GCTGTACTTGTACCAACCCAAAC 59.996 47.826 8.25 0.00 0.00 2.93
846 883 4.857679 TGTACTTGTACCAACCCAAACTT 58.142 39.130 8.25 0.00 0.00 2.66
848 885 3.293337 ACTTGTACCAACCCAAACTTCC 58.707 45.455 0.00 0.00 0.00 3.46
849 886 1.970092 TGTACCAACCCAAACTTCCG 58.030 50.000 0.00 0.00 0.00 4.30
850 887 1.241165 GTACCAACCCAAACTTCCGG 58.759 55.000 0.00 0.00 0.00 5.14
851 888 0.537828 TACCAACCCAAACTTCCGGC 60.538 55.000 0.00 0.00 0.00 6.13
852 889 2.642700 CAACCCAAACTTCCGGCG 59.357 61.111 0.00 0.00 0.00 6.46
944 983 1.131315 GCTTGCTCGATCAAACCTTCC 59.869 52.381 2.98 0.00 0.00 3.46
990 1029 2.028930 TCGAGACCAAGGAAGAAGAAGC 60.029 50.000 0.00 0.00 0.00 3.86
991 1030 2.705730 GAGACCAAGGAAGAAGAAGCC 58.294 52.381 0.00 0.00 0.00 4.35
993 1032 1.002087 GACCAAGGAAGAAGAAGCCGA 59.998 52.381 0.00 0.00 0.00 5.54
1330 1369 1.647629 CTCGGGTGGATCGAGTACG 59.352 63.158 5.46 0.00 46.16 3.67
1341 1380 1.226974 CGAGTACGTCATGCTGGGG 60.227 63.158 0.00 0.00 34.56 4.96
1490 1533 3.110593 TGCACGCGTACATTTTACATG 57.889 42.857 13.44 0.00 0.00 3.21
1601 1661 1.050204 GCCCTCTCATGATCTGCTCT 58.950 55.000 0.00 0.00 0.00 4.09
1616 1676 0.239347 GCTCTGCTCAAAATGCGTGT 59.761 50.000 0.00 0.00 0.00 4.49
1709 1775 3.254166 AGCTAGCAACACCAGTCAATTTG 59.746 43.478 18.83 0.00 0.00 2.32
1710 1776 2.514205 AGCAACACCAGTCAATTTGC 57.486 45.000 0.00 0.00 42.35 3.68
1712 1778 1.202510 GCAACACCAGTCAATTTGCCA 60.203 47.619 0.00 0.00 37.24 4.92
1713 1779 2.746269 CAACACCAGTCAATTTGCCAG 58.254 47.619 0.00 0.00 0.00 4.85
1714 1780 1.331214 ACACCAGTCAATTTGCCAGG 58.669 50.000 0.00 0.00 0.00 4.45
1715 1781 1.331214 CACCAGTCAATTTGCCAGGT 58.669 50.000 0.00 0.00 0.00 4.00
1716 1782 1.270550 CACCAGTCAATTTGCCAGGTC 59.729 52.381 0.00 0.00 0.00 3.85
1718 1784 0.890683 CAGTCAATTTGCCAGGTCCC 59.109 55.000 0.00 0.00 0.00 4.46
1719 1785 0.779997 AGTCAATTTGCCAGGTCCCT 59.220 50.000 0.00 0.00 0.00 4.20
1720 1786 1.992557 AGTCAATTTGCCAGGTCCCTA 59.007 47.619 0.00 0.00 0.00 3.53
1721 1787 2.378547 AGTCAATTTGCCAGGTCCCTAA 59.621 45.455 0.00 0.00 0.00 2.69
1735 1828 2.223377 GTCCCTAAAACACGAAGCTGTG 59.777 50.000 2.77 2.77 45.41 3.66
1814 1923 4.127907 GGAGAATTTCCGTGGATAAGGTC 58.872 47.826 0.00 0.00 35.91 3.85
2061 2188 2.052237 GTGACGTGCTGCCGTTTG 60.052 61.111 15.31 0.00 41.98 2.93
2072 2199 3.030652 CCGTTTGCACTCCACACC 58.969 61.111 0.00 0.00 0.00 4.16
2123 2268 8.279970 TCTTTTGACATCATTCATTAATCGGT 57.720 30.769 0.00 0.00 0.00 4.69
2129 2274 2.869801 TCATTCATTAATCGGTGTCGCC 59.130 45.455 0.00 0.00 36.13 5.54
2141 2289 0.447801 GTGTCGCCGAGAAATGCATT 59.552 50.000 5.99 5.99 0.00 3.56
2155 2303 7.166970 CGAGAAATGCATTGAGTGATATTTTGG 59.833 37.037 13.82 0.00 30.94 3.28
2161 2309 5.126061 GCATTGAGTGATATTTTGGTGGTCT 59.874 40.000 0.00 0.00 0.00 3.85
2503 2654 0.039798 TCCTTCTTCGTCAACGTCGG 60.040 55.000 2.09 0.00 40.80 4.79
2527 2678 1.217244 CCCTGCAGGTACGTACACC 59.783 63.158 30.63 13.66 39.02 4.16
2528 2679 1.217244 CCTGCAGGTACGTACACCC 59.783 63.158 25.53 10.20 39.62 4.61
2529 2680 1.255667 CCTGCAGGTACGTACACCCT 61.256 60.000 25.53 12.40 39.62 4.34
2530 2681 1.466856 CTGCAGGTACGTACACCCTA 58.533 55.000 26.02 8.13 39.62 3.53
2531 2682 1.133790 CTGCAGGTACGTACACCCTAC 59.866 57.143 26.02 10.52 39.62 3.18
2532 2683 1.176527 GCAGGTACGTACACCCTACA 58.823 55.000 26.02 0.00 39.62 2.74
2533 2684 1.135286 GCAGGTACGTACACCCTACAC 60.135 57.143 26.02 7.10 39.62 2.90
2563 2714 1.407258 CTCCTGCTCTGCTACACCTAC 59.593 57.143 0.00 0.00 0.00 3.18
2564 2715 1.186200 CCTGCTCTGCTACACCTACA 58.814 55.000 0.00 0.00 0.00 2.74
2565 2716 1.134965 CCTGCTCTGCTACACCTACAC 60.135 57.143 0.00 0.00 0.00 2.90
2566 2717 0.895530 TGCTCTGCTACACCTACACC 59.104 55.000 0.00 0.00 0.00 4.16
2567 2718 1.187087 GCTCTGCTACACCTACACCT 58.813 55.000 0.00 0.00 0.00 4.00
2568 2719 2.291346 TGCTCTGCTACACCTACACCTA 60.291 50.000 0.00 0.00 0.00 3.08
2569 2720 2.099427 GCTCTGCTACACCTACACCTAC 59.901 54.545 0.00 0.00 0.00 3.18
2570 2721 3.353557 CTCTGCTACACCTACACCTACA 58.646 50.000 0.00 0.00 0.00 2.74
2571 2722 3.087031 TCTGCTACACCTACACCTACAC 58.913 50.000 0.00 0.00 0.00 2.90
2576 2727 3.530928 ACACCTACACCTACACCTACA 57.469 47.619 0.00 0.00 0.00 2.74
2614 2774 6.072563 GAGTACTTCTCTCAAGGACGTAAGTT 60.073 42.308 0.00 0.00 45.34 2.66
2627 2787 1.323534 CGTAAGTTCGGTGCATGCTAC 59.676 52.381 20.33 14.70 0.00 3.58
2628 2788 2.618053 GTAAGTTCGGTGCATGCTACT 58.382 47.619 20.33 11.05 0.00 2.57
2630 2790 0.898320 AGTTCGGTGCATGCTACTCT 59.102 50.000 20.33 7.02 0.00 3.24
2632 2792 2.099921 AGTTCGGTGCATGCTACTCTAG 59.900 50.000 20.33 8.62 0.00 2.43
2633 2793 2.052782 TCGGTGCATGCTACTCTAGA 57.947 50.000 20.33 10.44 0.00 2.43
2634 2794 2.587522 TCGGTGCATGCTACTCTAGAT 58.412 47.619 20.33 0.00 0.00 1.98
2635 2795 2.294512 TCGGTGCATGCTACTCTAGATG 59.705 50.000 20.33 0.00 0.00 2.90
2636 2796 2.411904 GGTGCATGCTACTCTAGATGC 58.588 52.381 20.33 6.78 38.57 3.91
2644 2804 3.567585 TGCTACTCTAGATGCTGCTACTG 59.432 47.826 0.00 0.00 0.00 2.74
2671 2831 1.871039 CACGTCACTTTTACTGTGGGG 59.129 52.381 0.00 0.00 36.21 4.96
2675 2835 0.958822 CACTTTTACTGTGGGGGTGC 59.041 55.000 0.00 0.00 0.00 5.01
2676 2836 0.553819 ACTTTTACTGTGGGGGTGCA 59.446 50.000 0.00 0.00 0.00 4.57
2697 2867 1.092345 GGATCTCCAGGCGAGCAAAC 61.092 60.000 0.00 0.00 38.62 2.93
2698 2868 1.424493 GATCTCCAGGCGAGCAAACG 61.424 60.000 0.00 0.00 38.62 3.60
2906 3102 5.291293 CATGATGAATGCTGATAATGCGA 57.709 39.130 0.00 0.00 0.00 5.10
2938 3136 9.849166 CATATGCATGCATGAATTAATAAGACA 57.151 29.630 37.43 16.61 37.82 3.41
2939 3137 9.850628 ATATGCATGCATGAATTAATAAGACAC 57.149 29.630 37.43 7.50 37.82 3.67
2940 3138 7.337480 TGCATGCATGAATTAATAAGACACT 57.663 32.000 30.64 0.00 0.00 3.55
2941 3139 8.449251 TGCATGCATGAATTAATAAGACACTA 57.551 30.769 30.64 0.00 0.00 2.74
2942 3140 8.562052 TGCATGCATGAATTAATAAGACACTAG 58.438 33.333 30.64 0.00 0.00 2.57
2957 3155 9.770097 ATAAGACACTAGTATTACTACTACGCA 57.230 33.333 0.00 0.00 39.04 5.24
3084 3321 4.083862 GAGGCCGAGGGTGTCCAC 62.084 72.222 0.00 0.00 34.83 4.02
3097 3334 0.530744 TGTCCACGATCTTCTTCGGG 59.469 55.000 0.00 0.00 43.33 5.14
3331 3574 6.984474 GGCTATATACTTATGTGTGTGTGTGT 59.016 38.462 0.00 0.00 0.00 3.72
3332 3575 7.042725 GGCTATATACTTATGTGTGTGTGTGTG 60.043 40.741 0.00 0.00 0.00 3.82
3333 3576 7.491372 GCTATATACTTATGTGTGTGTGTGTGT 59.509 37.037 0.00 0.00 0.00 3.72
3334 3577 5.922739 ATACTTATGTGTGTGTGTGTGTG 57.077 39.130 0.00 0.00 0.00 3.82
3335 3578 3.605634 ACTTATGTGTGTGTGTGTGTGT 58.394 40.909 0.00 0.00 0.00 3.72
3336 3579 3.373748 ACTTATGTGTGTGTGTGTGTGTG 59.626 43.478 0.00 0.00 0.00 3.82
3339 3585 0.167908 GTGTGTGTGTGTGTGTGTGG 59.832 55.000 0.00 0.00 0.00 4.17
3345 3591 0.662619 GTGTGTGTGTGTGGTCATGG 59.337 55.000 0.00 0.00 0.00 3.66
3348 3594 0.543749 TGTGTGTGTGGTCATGGTCA 59.456 50.000 0.00 0.00 0.00 4.02
3368 3614 5.763698 GGTCATAGTTAACTAATGAAGCCCC 59.236 44.000 18.88 14.34 31.39 5.80
3370 3616 3.277142 AGTTAACTAATGAAGCCCCGG 57.723 47.619 6.26 0.00 0.00 5.73
3371 3617 2.841881 AGTTAACTAATGAAGCCCCGGA 59.158 45.455 6.26 0.00 0.00 5.14
3372 3618 3.458487 AGTTAACTAATGAAGCCCCGGAT 59.542 43.478 6.26 0.00 0.00 4.18
3373 3619 4.657039 AGTTAACTAATGAAGCCCCGGATA 59.343 41.667 6.26 0.00 0.00 2.59
3375 3621 4.724279 AACTAATGAAGCCCCGGATATT 57.276 40.909 0.73 0.00 0.00 1.28
3376 3622 4.287766 ACTAATGAAGCCCCGGATATTC 57.712 45.455 0.73 4.13 0.00 1.75
3380 3626 3.374042 TGAAGCCCCGGATATTCAAAA 57.626 42.857 0.73 0.00 0.00 2.44
3411 4079 0.378962 ACACGTGCTCTCGCTATCTC 59.621 55.000 17.22 0.00 36.97 2.75
3416 4084 2.265182 GCTCTCGCTATCTCGGCCT 61.265 63.158 0.00 0.00 0.00 5.19
3421 4089 0.385751 TCGCTATCTCGGCCTCTTTG 59.614 55.000 0.00 0.00 0.00 2.77
3426 4094 0.608640 ATCTCGGCCTCTTTGTCGTT 59.391 50.000 0.00 0.00 0.00 3.85
3449 4117 4.464244 TGAGAATGAGACCACCTCTTGTAG 59.536 45.833 0.00 0.00 42.44 2.74
3450 4118 3.196685 AGAATGAGACCACCTCTTGTAGC 59.803 47.826 0.00 0.00 42.44 3.58
3468 4136 1.445942 CCGGCCCGTATCTCACAAT 59.554 57.895 0.85 0.00 0.00 2.71
3477 4155 5.107607 GCCCGTATCTCACAATAAATACGTG 60.108 44.000 0.00 3.27 43.21 4.49
3501 4179 8.560374 GTGATATTCCTATTTGAACTGTAAGGC 58.440 37.037 0.00 0.00 39.30 4.35
3504 4182 5.755409 TCCTATTTGAACTGTAAGGCTCA 57.245 39.130 0.00 0.00 39.30 4.26
3535 4213 4.944930 ACGCACATAAAGGTAAAGCCATTA 59.055 37.500 0.00 0.00 40.61 1.90
3536 4214 5.065988 ACGCACATAAAGGTAAAGCCATTAG 59.934 40.000 0.00 0.00 40.61 1.73
3537 4215 5.295787 CGCACATAAAGGTAAAGCCATTAGA 59.704 40.000 0.00 0.00 40.61 2.10
3538 4216 6.183360 CGCACATAAAGGTAAAGCCATTAGAA 60.183 38.462 0.00 0.00 40.61 2.10
3539 4217 7.543756 GCACATAAAGGTAAAGCCATTAGAAA 58.456 34.615 0.00 0.00 40.61 2.52
3540 4218 8.032451 GCACATAAAGGTAAAGCCATTAGAAAA 58.968 33.333 0.00 0.00 40.61 2.29
3541 4219 9.573133 CACATAAAGGTAAAGCCATTAGAAAAG 57.427 33.333 0.00 0.00 40.61 2.27
3542 4220 8.251026 ACATAAAGGTAAAGCCATTAGAAAAGC 58.749 33.333 0.00 0.00 40.61 3.51
3543 4221 6.664428 AAAGGTAAAGCCATTAGAAAAGCA 57.336 33.333 0.00 0.00 40.61 3.91
3544 4222 5.904362 AGGTAAAGCCATTAGAAAAGCAG 57.096 39.130 0.00 0.00 40.61 4.24
3545 4223 4.706962 AGGTAAAGCCATTAGAAAAGCAGG 59.293 41.667 0.00 0.00 40.61 4.85
3546 4224 4.462834 GGTAAAGCCATTAGAAAAGCAGGT 59.537 41.667 0.00 0.00 37.17 4.00
3547 4225 4.525912 AAAGCCATTAGAAAAGCAGGTG 57.474 40.909 0.00 0.00 0.00 4.00
3548 4226 1.821136 AGCCATTAGAAAAGCAGGTGC 59.179 47.619 0.00 0.00 42.49 5.01
3549 4227 1.545582 GCCATTAGAAAAGCAGGTGCA 59.454 47.619 4.48 0.00 45.16 4.57
3550 4228 2.167075 GCCATTAGAAAAGCAGGTGCAT 59.833 45.455 4.48 0.00 45.16 3.96
3551 4229 3.368739 GCCATTAGAAAAGCAGGTGCATT 60.369 43.478 4.48 0.00 45.16 3.56
3552 4230 4.824289 CCATTAGAAAAGCAGGTGCATTT 58.176 39.130 4.92 4.92 43.49 2.32
3555 4233 2.084610 GAAAAGCAGGTGCATTTCCC 57.915 50.000 17.74 0.00 46.74 3.97
3556 4234 1.620323 GAAAAGCAGGTGCATTTCCCT 59.380 47.619 17.74 0.00 46.74 4.20
3557 4235 1.260544 AAAGCAGGTGCATTTCCCTC 58.739 50.000 4.48 0.00 45.16 4.30
3558 4236 0.112995 AAGCAGGTGCATTTCCCTCA 59.887 50.000 4.48 0.00 45.16 3.86
3559 4237 0.112995 AGCAGGTGCATTTCCCTCAA 59.887 50.000 4.48 0.00 45.16 3.02
3560 4238 0.968405 GCAGGTGCATTTCCCTCAAA 59.032 50.000 0.00 0.00 41.59 2.69
3561 4239 1.344114 GCAGGTGCATTTCCCTCAAAA 59.656 47.619 0.00 0.00 41.59 2.44
3562 4240 2.224257 GCAGGTGCATTTCCCTCAAAAA 60.224 45.455 0.00 0.00 41.59 1.94
3611 4289 5.443185 TGAAAGAACAGAAATTGGAGCAG 57.557 39.130 0.00 0.00 0.00 4.24
3612 4290 4.889409 TGAAAGAACAGAAATTGGAGCAGT 59.111 37.500 0.00 0.00 0.00 4.40
3613 4291 5.360714 TGAAAGAACAGAAATTGGAGCAGTT 59.639 36.000 0.00 0.00 0.00 3.16
3614 4292 4.843220 AGAACAGAAATTGGAGCAGTTG 57.157 40.909 0.00 0.00 0.00 3.16
3615 4293 3.571401 AGAACAGAAATTGGAGCAGTTGG 59.429 43.478 0.00 0.00 0.00 3.77
3616 4294 3.228188 ACAGAAATTGGAGCAGTTGGA 57.772 42.857 0.00 0.00 0.00 3.53
3617 4295 3.152341 ACAGAAATTGGAGCAGTTGGAG 58.848 45.455 0.00 0.00 0.00 3.86
3618 4296 2.094854 CAGAAATTGGAGCAGTTGGAGC 60.095 50.000 0.00 0.00 0.00 4.70
3619 4297 1.888512 GAAATTGGAGCAGTTGGAGCA 59.111 47.619 0.00 0.00 0.00 4.26
3620 4298 1.999648 AATTGGAGCAGTTGGAGCAA 58.000 45.000 0.00 0.00 0.00 3.91
3621 4299 2.226962 ATTGGAGCAGTTGGAGCAAT 57.773 45.000 0.00 0.00 0.00 3.56
3622 4300 1.999648 TTGGAGCAGTTGGAGCAATT 58.000 45.000 0.00 0.00 0.00 2.32
3623 4301 2.877097 TGGAGCAGTTGGAGCAATTA 57.123 45.000 0.00 0.00 0.00 1.40
3624 4302 2.715046 TGGAGCAGTTGGAGCAATTAG 58.285 47.619 0.00 0.00 0.00 1.73
3625 4303 2.305635 TGGAGCAGTTGGAGCAATTAGA 59.694 45.455 0.00 0.00 0.00 2.10
3626 4304 2.680339 GGAGCAGTTGGAGCAATTAGAC 59.320 50.000 0.00 0.00 0.00 2.59
3627 4305 2.349886 GAGCAGTTGGAGCAATTAGACG 59.650 50.000 0.00 0.00 0.00 4.18
3628 4306 2.028112 AGCAGTTGGAGCAATTAGACGA 60.028 45.455 0.00 0.00 0.00 4.20
3629 4307 2.742053 GCAGTTGGAGCAATTAGACGAA 59.258 45.455 0.00 0.00 0.00 3.85
3630 4308 3.188460 GCAGTTGGAGCAATTAGACGAAA 59.812 43.478 0.00 0.00 0.00 3.46
3631 4309 4.320202 GCAGTTGGAGCAATTAGACGAAAA 60.320 41.667 0.00 0.00 0.00 2.29
3632 4310 5.757886 CAGTTGGAGCAATTAGACGAAAAA 58.242 37.500 0.00 0.00 0.00 1.94
3655 4333 8.647143 AAAAATATACAATAGCGCAAATTGCT 57.353 26.923 26.21 18.98 42.25 3.91
3656 4334 8.647143 AAAATATACAATAGCGCAAATTGCTT 57.353 26.923 26.21 18.84 42.25 3.91
3657 4335 8.647143 AAATATACAATAGCGCAAATTGCTTT 57.353 26.923 26.21 19.15 42.25 3.51
3658 4336 8.647143 AATATACAATAGCGCAAATTGCTTTT 57.353 26.923 26.21 16.05 42.25 2.27
3660 4338 3.993547 CAATAGCGCAAATTGCTTTTGG 58.006 40.909 16.42 0.87 43.31 3.28
3661 4339 3.591196 ATAGCGCAAATTGCTTTTGGA 57.409 38.095 16.42 0.00 44.10 3.53
3662 4340 1.787012 AGCGCAAATTGCTTTTGGAG 58.213 45.000 16.42 0.00 44.10 3.86
3663 4341 0.792031 GCGCAAATTGCTTTTGGAGG 59.208 50.000 16.42 0.00 44.10 4.30
3664 4342 0.792031 CGCAAATTGCTTTTGGAGGC 59.208 50.000 16.42 0.00 44.10 4.70
3665 4343 1.159285 GCAAATTGCTTTTGGAGGCC 58.841 50.000 11.19 0.00 44.10 5.19
3666 4344 1.431496 CAAATTGCTTTTGGAGGCCG 58.569 50.000 0.00 0.00 40.90 6.13
3667 4345 1.000731 CAAATTGCTTTTGGAGGCCGA 59.999 47.619 0.00 0.00 40.90 5.54
3668 4346 0.890683 AATTGCTTTTGGAGGCCGAG 59.109 50.000 0.00 0.00 0.00 4.63
3669 4347 1.598701 ATTGCTTTTGGAGGCCGAGC 61.599 55.000 0.00 2.19 0.00 5.03
3670 4348 2.360475 GCTTTTGGAGGCCGAGCT 60.360 61.111 0.00 0.00 0.00 4.09
3671 4349 2.402572 GCTTTTGGAGGCCGAGCTC 61.403 63.158 2.73 2.73 0.00 4.09
3672 4350 1.746991 CTTTTGGAGGCCGAGCTCC 60.747 63.158 8.47 0.00 40.05 4.70
3673 4351 2.469465 CTTTTGGAGGCCGAGCTCCA 62.469 60.000 8.47 7.35 46.84 3.86
3675 4353 3.473647 TGGAGGCCGAGCTCCATG 61.474 66.667 8.47 0.00 44.02 3.66
3676 4354 4.247380 GGAGGCCGAGCTCCATGG 62.247 72.222 4.97 4.97 39.45 3.66
3677 4355 3.157252 GAGGCCGAGCTCCATGGA 61.157 66.667 15.27 15.27 0.00 3.41
3678 4356 3.160047 AGGCCGAGCTCCATGGAG 61.160 66.667 33.73 33.73 44.56 3.86
3679 4357 3.157252 GGCCGAGCTCCATGGAGA 61.157 66.667 40.29 9.63 44.53 3.71
3680 4358 2.107953 GCCGAGCTCCATGGAGAC 59.892 66.667 40.29 30.08 44.53 3.36
3681 4359 2.818132 CCGAGCTCCATGGAGACC 59.182 66.667 40.29 28.33 44.53 3.85
3682 4360 2.801631 CCGAGCTCCATGGAGACCC 61.802 68.421 40.29 26.13 44.53 4.46
3683 4361 2.801631 CGAGCTCCATGGAGACCCC 61.802 68.421 40.29 24.27 44.53 4.95
3684 4362 2.367512 AGCTCCATGGAGACCCCC 60.368 66.667 40.29 23.92 44.53 5.40
3685 4363 2.692368 GCTCCATGGAGACCCCCA 60.692 66.667 40.29 5.59 44.53 4.96
3686 4364 2.308722 GCTCCATGGAGACCCCCAA 61.309 63.158 40.29 4.80 44.53 4.12
3687 4365 1.863155 GCTCCATGGAGACCCCCAAA 61.863 60.000 40.29 4.01 44.53 3.28
3688 4366 0.929244 CTCCATGGAGACCCCCAAAT 59.071 55.000 34.54 0.00 44.53 2.32
3689 4367 0.630673 TCCATGGAGACCCCCAAATG 59.369 55.000 11.44 0.00 40.04 2.32
3690 4368 1.044790 CCATGGAGACCCCCAAATGC 61.045 60.000 5.56 0.00 40.04 3.56
3691 4369 0.324552 CATGGAGACCCCCAAATGCA 60.325 55.000 0.00 0.00 40.04 3.96
3692 4370 0.413037 ATGGAGACCCCCAAATGCAA 59.587 50.000 0.00 0.00 40.04 4.08
3693 4371 0.189574 TGGAGACCCCCAAATGCAAA 59.810 50.000 0.00 0.00 32.31 3.68
3694 4372 1.347062 GGAGACCCCCAAATGCAAAA 58.653 50.000 0.00 0.00 0.00 2.44
3695 4373 1.696884 GGAGACCCCCAAATGCAAAAA 59.303 47.619 0.00 0.00 0.00 1.94
3696 4374 2.305635 GGAGACCCCCAAATGCAAAAAT 59.694 45.455 0.00 0.00 0.00 1.82
3697 4375 3.599343 GAGACCCCCAAATGCAAAAATC 58.401 45.455 0.00 0.00 0.00 2.17
3698 4376 2.978278 AGACCCCCAAATGCAAAAATCA 59.022 40.909 0.00 0.00 0.00 2.57
3699 4377 3.393941 AGACCCCCAAATGCAAAAATCAA 59.606 39.130 0.00 0.00 0.00 2.57
3700 4378 4.140536 GACCCCCAAATGCAAAAATCAAA 58.859 39.130 0.00 0.00 0.00 2.69
3701 4379 4.738685 ACCCCCAAATGCAAAAATCAAAT 58.261 34.783 0.00 0.00 0.00 2.32
3702 4380 5.146298 ACCCCCAAATGCAAAAATCAAATT 58.854 33.333 0.00 0.00 0.00 1.82
3703 4381 5.601729 ACCCCCAAATGCAAAAATCAAATTT 59.398 32.000 0.00 0.00 0.00 1.82
3704 4382 6.157904 CCCCCAAATGCAAAAATCAAATTTC 58.842 36.000 0.00 0.00 0.00 2.17
3705 4383 5.857517 CCCCAAATGCAAAAATCAAATTTCG 59.142 36.000 0.00 0.00 0.00 3.46
3706 4384 6.437094 CCCAAATGCAAAAATCAAATTTCGT 58.563 32.000 0.00 0.00 0.00 3.85
3707 4385 7.308229 CCCCAAATGCAAAAATCAAATTTCGTA 60.308 33.333 0.00 0.00 0.00 3.43
3708 4386 8.072567 CCCAAATGCAAAAATCAAATTTCGTAA 58.927 29.630 0.00 0.00 0.00 3.18
3709 4387 9.443283 CCAAATGCAAAAATCAAATTTCGTAAA 57.557 25.926 0.00 0.00 0.00 2.01
3772 4450 9.499479 AATACAAAGATAGATGAAGGCATAGTG 57.501 33.333 0.00 0.00 34.11 2.74
3773 4451 5.762218 ACAAAGATAGATGAAGGCATAGTGC 59.238 40.000 0.00 0.00 44.08 4.40
3797 4475 7.603297 CACAAGTGTGTAAATTTTTAGGACG 57.397 36.000 3.17 0.00 40.96 4.79
3798 4476 7.411274 CACAAGTGTGTAAATTTTTAGGACGA 58.589 34.615 3.17 0.00 40.96 4.20
3799 4477 7.911205 CACAAGTGTGTAAATTTTTAGGACGAA 59.089 33.333 3.17 0.00 40.96 3.85
3800 4478 8.460428 ACAAGTGTGTAAATTTTTAGGACGAAA 58.540 29.630 0.00 0.00 35.72 3.46
3801 4479 9.458374 CAAGTGTGTAAATTTTTAGGACGAAAT 57.542 29.630 0.00 0.00 0.00 2.17
3804 4482 9.881529 GTGTGTAAATTTTTAGGACGAAATACA 57.118 29.630 0.00 0.00 0.00 2.29
3815 4493 6.683974 AGGACGAAATACATTGAAATGAGG 57.316 37.500 9.94 0.00 39.67 3.86
3816 4494 5.590259 AGGACGAAATACATTGAAATGAGGG 59.410 40.000 9.94 0.00 39.67 4.30
3817 4495 5.588648 GGACGAAATACATTGAAATGAGGGA 59.411 40.000 9.94 0.00 39.67 4.20
3818 4496 6.263168 GGACGAAATACATTGAAATGAGGGAT 59.737 38.462 9.94 0.00 39.67 3.85
3819 4497 7.031226 ACGAAATACATTGAAATGAGGGATG 57.969 36.000 9.94 0.00 39.67 3.51
3820 4498 6.603201 ACGAAATACATTGAAATGAGGGATGT 59.397 34.615 9.94 0.00 39.67 3.06
3821 4499 6.914215 CGAAATACATTGAAATGAGGGATGTG 59.086 38.462 9.94 0.00 39.67 3.21
3822 4500 5.779529 ATACATTGAAATGAGGGATGTGC 57.220 39.130 9.94 0.00 39.67 4.57
3823 4501 3.433343 ACATTGAAATGAGGGATGTGCA 58.567 40.909 9.94 0.00 39.67 4.57
3824 4502 3.833650 ACATTGAAATGAGGGATGTGCAA 59.166 39.130 9.94 0.00 39.67 4.08
3825 4503 4.283978 ACATTGAAATGAGGGATGTGCAAA 59.716 37.500 9.94 0.00 39.67 3.68
3826 4504 4.952071 TTGAAATGAGGGATGTGCAAAA 57.048 36.364 0.00 0.00 0.00 2.44
3827 4505 4.952071 TGAAATGAGGGATGTGCAAAAA 57.048 36.364 0.00 0.00 0.00 1.94
3850 4528 8.648557 AAAAGACAGATTTGAGGCTTTTTAAC 57.351 30.769 0.43 0.00 33.96 2.01
3851 4529 6.959639 AGACAGATTTGAGGCTTTTTAACA 57.040 33.333 0.00 0.00 0.00 2.41
3852 4530 6.739112 AGACAGATTTGAGGCTTTTTAACAC 58.261 36.000 0.00 0.00 0.00 3.32
3853 4531 6.321181 AGACAGATTTGAGGCTTTTTAACACA 59.679 34.615 0.00 0.00 0.00 3.72
3854 4532 7.014615 AGACAGATTTGAGGCTTTTTAACACAT 59.985 33.333 0.00 0.00 0.00 3.21
3855 4533 6.925165 ACAGATTTGAGGCTTTTTAACACATG 59.075 34.615 0.00 0.00 0.00 3.21
3856 4534 7.147312 CAGATTTGAGGCTTTTTAACACATGA 58.853 34.615 0.00 0.00 0.00 3.07
3857 4535 7.816031 CAGATTTGAGGCTTTTTAACACATGAT 59.184 33.333 0.00 0.00 0.00 2.45
3858 4536 9.023962 AGATTTGAGGCTTTTTAACACATGATA 57.976 29.630 0.00 0.00 0.00 2.15
3859 4537 9.807649 GATTTGAGGCTTTTTAACACATGATAT 57.192 29.630 0.00 0.00 0.00 1.63
3875 4553 9.552695 ACACATGATATTATTCATCCTCCTAGA 57.447 33.333 0.00 0.00 34.09 2.43
3880 4558 8.907885 TGATATTATTCATCCTCCTAGATCACG 58.092 37.037 0.00 0.00 0.00 4.35
3881 4559 9.126151 GATATTATTCATCCTCCTAGATCACGA 57.874 37.037 0.00 0.00 0.00 4.35
3882 4560 7.782897 ATTATTCATCCTCCTAGATCACGAA 57.217 36.000 0.00 0.00 0.00 3.85
3883 4561 7.782897 TTATTCATCCTCCTAGATCACGAAT 57.217 36.000 0.00 0.00 0.00 3.34
3884 4562 6.678568 ATTCATCCTCCTAGATCACGAATT 57.321 37.500 0.00 0.00 0.00 2.17
3885 4563 6.485830 TTCATCCTCCTAGATCACGAATTT 57.514 37.500 0.00 0.00 0.00 1.82
3886 4564 5.847304 TCATCCTCCTAGATCACGAATTTG 58.153 41.667 0.00 0.00 0.00 2.32
3887 4565 5.363868 TCATCCTCCTAGATCACGAATTTGT 59.636 40.000 0.00 0.00 0.00 2.83
3888 4566 5.263968 TCCTCCTAGATCACGAATTTGTC 57.736 43.478 0.00 0.00 0.00 3.18
3889 4567 4.956700 TCCTCCTAGATCACGAATTTGTCT 59.043 41.667 0.00 0.00 0.00 3.41
3890 4568 5.422331 TCCTCCTAGATCACGAATTTGTCTT 59.578 40.000 0.00 0.00 0.00 3.01
3891 4569 6.070767 TCCTCCTAGATCACGAATTTGTCTTT 60.071 38.462 0.00 0.00 0.00 2.52
3892 4570 6.595716 CCTCCTAGATCACGAATTTGTCTTTT 59.404 38.462 0.00 0.00 0.00 2.27
3893 4571 7.119846 CCTCCTAGATCACGAATTTGTCTTTTT 59.880 37.037 0.00 0.00 0.00 1.94
3914 4592 4.850859 TTATACAGGTCGCATTTCAACG 57.149 40.909 0.00 0.00 0.00 4.10
3915 4593 0.793861 TACAGGTCGCATTTCAACGC 59.206 50.000 0.00 0.00 0.00 4.84
3916 4594 1.163420 ACAGGTCGCATTTCAACGCA 61.163 50.000 0.00 0.00 0.00 5.24
3917 4595 0.725784 CAGGTCGCATTTCAACGCAC 60.726 55.000 0.00 0.00 0.00 5.34
3918 4596 1.163420 AGGTCGCATTTCAACGCACA 61.163 50.000 0.00 0.00 0.00 4.57
3919 4597 0.109781 GGTCGCATTTCAACGCACAT 60.110 50.000 0.00 0.00 0.00 3.21
3920 4598 1.250476 GTCGCATTTCAACGCACATC 58.750 50.000 0.00 0.00 0.00 3.06
3921 4599 0.167908 TCGCATTTCAACGCACATCC 59.832 50.000 0.00 0.00 0.00 3.51
3922 4600 0.798009 CGCATTTCAACGCACATCCC 60.798 55.000 0.00 0.00 0.00 3.85
3923 4601 0.798009 GCATTTCAACGCACATCCCG 60.798 55.000 0.00 0.00 0.00 5.14
3924 4602 0.801872 CATTTCAACGCACATCCCGA 59.198 50.000 0.00 0.00 0.00 5.14
3925 4603 1.086696 ATTTCAACGCACATCCCGAG 58.913 50.000 0.00 0.00 0.00 4.63
3926 4604 0.034198 TTTCAACGCACATCCCGAGA 59.966 50.000 0.00 0.00 0.00 4.04
3927 4605 0.034198 TTCAACGCACATCCCGAGAA 59.966 50.000 0.00 0.00 0.00 2.87
3928 4606 0.034198 TCAACGCACATCCCGAGAAA 59.966 50.000 0.00 0.00 0.00 2.52
3929 4607 0.871722 CAACGCACATCCCGAGAAAA 59.128 50.000 0.00 0.00 0.00 2.29
3930 4608 1.265635 CAACGCACATCCCGAGAAAAA 59.734 47.619 0.00 0.00 0.00 1.94
3960 4638 9.540538 TCATGGTATAAATTTTCTTTTCCCTCA 57.459 29.630 0.00 0.00 0.00 3.86
3961 4639 9.586435 CATGGTATAAATTTTCTTTTCCCTCAC 57.414 33.333 0.00 0.00 0.00 3.51
3962 4640 8.713708 TGGTATAAATTTTCTTTTCCCTCACA 57.286 30.769 0.00 0.00 0.00 3.58
3963 4641 9.148879 TGGTATAAATTTTCTTTTCCCTCACAA 57.851 29.630 0.00 0.00 0.00 3.33
3964 4642 9.990360 GGTATAAATTTTCTTTTCCCTCACAAA 57.010 29.630 0.00 0.00 0.00 2.83
3969 4647 9.631257 AAATTTTCTTTTCCCTCACAAATCAAT 57.369 25.926 0.00 0.00 0.00 2.57
3972 4650 9.541143 TTTTCTTTTCCCTCACAAATCAATAAC 57.459 29.630 0.00 0.00 0.00 1.89
3973 4651 8.477419 TTCTTTTCCCTCACAAATCAATAACT 57.523 30.769 0.00 0.00 0.00 2.24
3974 4652 8.477419 TCTTTTCCCTCACAAATCAATAACTT 57.523 30.769 0.00 0.00 0.00 2.66
3975 4653 8.359642 TCTTTTCCCTCACAAATCAATAACTTG 58.640 33.333 0.00 0.00 0.00 3.16
3976 4654 7.831691 TTTCCCTCACAAATCAATAACTTGA 57.168 32.000 0.00 0.00 45.15 3.02
3977 4655 6.817765 TCCCTCACAAATCAATAACTTGAC 57.182 37.500 0.00 0.00 43.92 3.18
3978 4656 6.542821 TCCCTCACAAATCAATAACTTGACT 58.457 36.000 0.00 0.00 43.92 3.41
3979 4657 7.685481 TCCCTCACAAATCAATAACTTGACTA 58.315 34.615 0.00 0.00 43.92 2.59
3980 4658 8.328758 TCCCTCACAAATCAATAACTTGACTAT 58.671 33.333 0.00 0.00 43.92 2.12
3981 4659 8.960591 CCCTCACAAATCAATAACTTGACTATT 58.039 33.333 0.00 0.00 43.92 1.73
4014 4692 4.197107 GCAAGTATAGAATTGCCGACAC 57.803 45.455 11.25 0.00 44.76 3.67
4015 4693 3.621268 GCAAGTATAGAATTGCCGACACA 59.379 43.478 11.25 0.00 44.76 3.72
4016 4694 4.273480 GCAAGTATAGAATTGCCGACACAT 59.727 41.667 11.25 0.00 44.76 3.21
4017 4695 5.220854 GCAAGTATAGAATTGCCGACACATT 60.221 40.000 11.25 0.00 44.76 2.71
4018 4696 5.991328 AGTATAGAATTGCCGACACATTG 57.009 39.130 0.00 0.00 0.00 2.82
4019 4697 4.816385 AGTATAGAATTGCCGACACATTGG 59.184 41.667 0.00 0.00 0.00 3.16
4020 4698 1.909700 AGAATTGCCGACACATTGGT 58.090 45.000 0.00 0.00 0.00 3.67
4021 4699 3.066291 AGAATTGCCGACACATTGGTA 57.934 42.857 0.00 0.00 0.00 3.25
4022 4700 3.417101 AGAATTGCCGACACATTGGTAA 58.583 40.909 0.00 0.00 38.26 2.85
4023 4701 3.823873 AGAATTGCCGACACATTGGTAAA 59.176 39.130 0.00 0.00 37.50 2.01
4024 4702 3.848272 ATTGCCGACACATTGGTAAAG 57.152 42.857 0.00 0.00 37.50 1.85
4025 4703 1.529226 TGCCGACACATTGGTAAAGG 58.471 50.000 0.00 0.00 0.00 3.11
4026 4704 0.170339 GCCGACACATTGGTAAAGGC 59.830 55.000 0.00 0.00 33.66 4.35
4027 4705 1.529226 CCGACACATTGGTAAAGGCA 58.471 50.000 0.00 0.00 0.00 4.75
4028 4706 2.091541 CCGACACATTGGTAAAGGCAT 58.908 47.619 0.00 0.00 0.00 4.40
4029 4707 2.491693 CCGACACATTGGTAAAGGCATT 59.508 45.455 0.00 0.00 0.00 3.56
4030 4708 3.056891 CCGACACATTGGTAAAGGCATTT 60.057 43.478 0.53 0.53 0.00 2.32
4031 4709 4.555262 CGACACATTGGTAAAGGCATTTT 58.445 39.130 0.00 0.00 0.00 1.82
4032 4710 5.336055 CCGACACATTGGTAAAGGCATTTTA 60.336 40.000 0.00 0.00 0.00 1.52
4033 4711 6.153067 CGACACATTGGTAAAGGCATTTTAA 58.847 36.000 0.00 0.00 33.22 1.52
4034 4712 6.811170 CGACACATTGGTAAAGGCATTTTAAT 59.189 34.615 0.00 0.00 33.22 1.40
4035 4713 7.971168 CGACACATTGGTAAAGGCATTTTAATA 59.029 33.333 0.00 0.00 33.22 0.98
4036 4714 8.996024 ACACATTGGTAAAGGCATTTTAATAC 57.004 30.769 0.00 0.00 33.22 1.89
4037 4715 8.589338 ACACATTGGTAAAGGCATTTTAATACA 58.411 29.630 0.00 0.00 33.22 2.29
4038 4716 9.598517 CACATTGGTAAAGGCATTTTAATACAT 57.401 29.630 0.00 0.00 33.22 2.29
4086 4764 6.243216 AGAAAAGTACTGGTTCCTAACACA 57.757 37.500 13.41 0.00 0.00 3.72
4087 4765 6.655930 AGAAAAGTACTGGTTCCTAACACAA 58.344 36.000 13.41 0.00 0.00 3.33
4088 4766 7.114095 AGAAAAGTACTGGTTCCTAACACAAA 58.886 34.615 13.41 0.00 0.00 2.83
4089 4767 6.688637 AAAGTACTGGTTCCTAACACAAAC 57.311 37.500 0.00 0.00 0.00 2.93
4090 4768 5.625568 AGTACTGGTTCCTAACACAAACT 57.374 39.130 0.00 0.00 0.00 2.66
4091 4769 5.997843 AGTACTGGTTCCTAACACAAACTT 58.002 37.500 0.00 0.00 0.00 2.66
4092 4770 5.820947 AGTACTGGTTCCTAACACAAACTTG 59.179 40.000 0.00 0.00 0.00 3.16
4093 4771 3.380320 ACTGGTTCCTAACACAAACTTGC 59.620 43.478 0.00 0.00 0.00 4.01
4094 4772 3.357203 TGGTTCCTAACACAAACTTGCA 58.643 40.909 0.00 0.00 0.00 4.08
4095 4773 3.957497 TGGTTCCTAACACAAACTTGCAT 59.043 39.130 0.00 0.00 0.00 3.96
4096 4774 4.404073 TGGTTCCTAACACAAACTTGCATT 59.596 37.500 0.00 0.00 0.00 3.56
4097 4775 5.105146 TGGTTCCTAACACAAACTTGCATTT 60.105 36.000 0.00 0.00 0.00 2.32
4098 4776 6.096987 TGGTTCCTAACACAAACTTGCATTTA 59.903 34.615 0.00 0.00 0.00 1.40
4099 4777 7.151976 GGTTCCTAACACAAACTTGCATTTAT 58.848 34.615 0.00 0.00 0.00 1.40
4100 4778 7.328493 GGTTCCTAACACAAACTTGCATTTATC 59.672 37.037 0.00 0.00 0.00 1.75
4101 4779 7.517614 TCCTAACACAAACTTGCATTTATCA 57.482 32.000 0.00 0.00 0.00 2.15
4102 4780 7.367285 TCCTAACACAAACTTGCATTTATCAC 58.633 34.615 0.00 0.00 0.00 3.06
4103 4781 7.230510 TCCTAACACAAACTTGCATTTATCACT 59.769 33.333 0.00 0.00 0.00 3.41
4104 4782 8.511321 CCTAACACAAACTTGCATTTATCACTA 58.489 33.333 0.00 0.00 0.00 2.74
4105 4783 9.891828 CTAACACAAACTTGCATTTATCACTAA 57.108 29.630 0.00 0.00 0.00 2.24
4106 4784 8.801715 AACACAAACTTGCATTTATCACTAAG 57.198 30.769 0.00 0.00 0.00 2.18
4107 4785 7.940850 ACACAAACTTGCATTTATCACTAAGT 58.059 30.769 0.00 0.00 0.00 2.24
4108 4786 8.413229 ACACAAACTTGCATTTATCACTAAGTT 58.587 29.630 0.00 0.00 39.30 2.66
4109 4787 9.248291 CACAAACTTGCATTTATCACTAAGTTT 57.752 29.630 0.00 0.00 44.48 2.66
4110 4788 9.816354 ACAAACTTGCATTTATCACTAAGTTTT 57.184 25.926 9.42 1.73 42.39 2.43
4117 4795 9.624697 TGCATTTATCACTAAGTTTTCATTGAC 57.375 29.630 0.00 0.00 0.00 3.18
4118 4796 9.846248 GCATTTATCACTAAGTTTTCATTGACT 57.154 29.630 0.00 0.00 0.00 3.41
4122 4800 9.917129 TTATCACTAAGTTTTCATTGACTACGA 57.083 29.630 0.00 0.00 0.00 3.43
4123 4801 8.827177 ATCACTAAGTTTTCATTGACTACGAA 57.173 30.769 0.00 0.00 0.00 3.85
4124 4802 8.827177 TCACTAAGTTTTCATTGACTACGAAT 57.173 30.769 0.00 0.00 0.00 3.34
4125 4803 8.708742 TCACTAAGTTTTCATTGACTACGAATG 58.291 33.333 0.00 0.00 32.91 2.67
4126 4804 8.708742 CACTAAGTTTTCATTGACTACGAATGA 58.291 33.333 0.00 0.00 37.91 2.57
4127 4805 9.436957 ACTAAGTTTTCATTGACTACGAATGAT 57.563 29.630 0.00 0.00 39.11 2.45
4131 4809 9.436957 AGTTTTCATTGACTACGAATGATAACT 57.563 29.630 18.34 18.34 46.25 2.24
4146 4824 9.079833 CGAATGATAACTTCGTAAACCTTAAGA 57.920 33.333 3.36 0.00 40.36 2.10
4157 4835 9.850628 TTCGTAAACCTTAAGATGATATATCGG 57.149 33.333 3.36 4.00 0.00 4.18
4158 4836 9.234827 TCGTAAACCTTAAGATGATATATCGGA 57.765 33.333 3.36 0.00 0.00 4.55
4165 4843 9.404348 CCTTAAGATGATATATCGGATCAATCG 57.596 37.037 3.36 0.00 36.90 3.34
4166 4844 8.803201 TTAAGATGATATATCGGATCAATCGC 57.197 34.615 12.97 0.00 36.90 4.58
4167 4845 6.647334 AGATGATATATCGGATCAATCGCT 57.353 37.500 12.97 0.00 36.90 4.93
4168 4846 6.676950 AGATGATATATCGGATCAATCGCTC 58.323 40.000 12.97 1.41 36.90 5.03
4169 4847 4.848757 TGATATATCGGATCAATCGCTCG 58.151 43.478 8.19 0.00 30.35 5.03
4170 4848 2.568696 ATATCGGATCAATCGCTCGG 57.431 50.000 0.00 0.00 0.00 4.63
4171 4849 1.530323 TATCGGATCAATCGCTCGGA 58.470 50.000 0.00 0.00 0.00 4.55
4172 4850 0.242286 ATCGGATCAATCGCTCGGAG 59.758 55.000 0.00 0.00 0.00 4.63
4173 4851 1.372251 CGGATCAATCGCTCGGAGG 60.372 63.158 7.20 0.00 0.00 4.30
4174 4852 1.742768 GGATCAATCGCTCGGAGGT 59.257 57.895 7.20 0.00 0.00 3.85
4175 4853 0.959553 GGATCAATCGCTCGGAGGTA 59.040 55.000 7.20 0.00 0.00 3.08
4176 4854 1.336056 GGATCAATCGCTCGGAGGTAC 60.336 57.143 7.20 0.00 0.00 3.34
4178 4856 2.336945 TCAATCGCTCGGAGGTACTA 57.663 50.000 7.20 0.00 41.55 1.82
4179 4857 2.860009 TCAATCGCTCGGAGGTACTAT 58.140 47.619 7.20 0.00 41.55 2.12
4180 4858 2.552743 TCAATCGCTCGGAGGTACTATG 59.447 50.000 7.20 0.00 41.55 2.23
4181 4859 2.273538 ATCGCTCGGAGGTACTATGT 57.726 50.000 7.20 0.00 41.55 2.29
4182 4860 2.048444 TCGCTCGGAGGTACTATGTT 57.952 50.000 7.20 0.00 41.55 2.71
4183 4861 2.372264 TCGCTCGGAGGTACTATGTTT 58.628 47.619 7.20 0.00 41.55 2.83
4184 4862 2.756760 TCGCTCGGAGGTACTATGTTTT 59.243 45.455 7.20 0.00 41.55 2.43
4185 4863 3.947196 TCGCTCGGAGGTACTATGTTTTA 59.053 43.478 7.20 0.00 41.55 1.52
4186 4864 4.036027 TCGCTCGGAGGTACTATGTTTTAG 59.964 45.833 7.20 0.00 41.55 1.85
4187 4865 4.036027 CGCTCGGAGGTACTATGTTTTAGA 59.964 45.833 7.20 0.00 41.55 2.10
4188 4866 5.449588 CGCTCGGAGGTACTATGTTTTAGAA 60.450 44.000 7.20 0.00 41.55 2.10
4189 4867 6.335777 GCTCGGAGGTACTATGTTTTAGAAA 58.664 40.000 7.20 0.00 41.55 2.52
4190 4868 6.815142 GCTCGGAGGTACTATGTTTTAGAAAA 59.185 38.462 7.20 0.00 41.55 2.29
4191 4869 7.332678 GCTCGGAGGTACTATGTTTTAGAAAAA 59.667 37.037 7.20 0.00 41.55 1.94
4239 4917 7.862512 AAAAATGTATGGTGGCCATTTAATG 57.137 32.000 9.72 0.00 42.23 1.90
4240 4918 4.605640 ATGTATGGTGGCCATTTAATGC 57.394 40.909 9.72 4.90 42.23 3.56
4241 4919 3.369175 TGTATGGTGGCCATTTAATGCA 58.631 40.909 9.72 7.63 42.23 3.96
4242 4920 3.384146 TGTATGGTGGCCATTTAATGCAG 59.616 43.478 9.72 0.00 42.23 4.41
4243 4921 1.193323 TGGTGGCCATTTAATGCAGG 58.807 50.000 9.72 0.00 0.00 4.85
4244 4922 0.465287 GGTGGCCATTTAATGCAGGG 59.535 55.000 9.72 0.00 0.00 4.45
4245 4923 1.484038 GTGGCCATTTAATGCAGGGA 58.516 50.000 9.72 0.00 0.00 4.20
4246 4924 1.830477 GTGGCCATTTAATGCAGGGAA 59.170 47.619 9.72 0.00 0.00 3.97
4247 4925 2.109774 TGGCCATTTAATGCAGGGAAG 58.890 47.619 0.00 0.00 0.00 3.46
4248 4926 1.413812 GGCCATTTAATGCAGGGAAGG 59.586 52.381 0.00 0.00 0.00 3.46
4249 4927 2.387757 GCCATTTAATGCAGGGAAGGA 58.612 47.619 0.00 0.00 0.00 3.36
4250 4928 2.765699 GCCATTTAATGCAGGGAAGGAA 59.234 45.455 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.482593 CTCACGTTCTAGATGGGCCTT 59.517 52.381 4.53 0.00 0.00 4.35
1 2 1.115467 CTCACGTTCTAGATGGGCCT 58.885 55.000 4.53 0.00 0.00 5.19
2 3 1.112113 TCTCACGTTCTAGATGGGCC 58.888 55.000 0.00 0.00 0.00 5.80
3 4 3.460857 AATCTCACGTTCTAGATGGGC 57.539 47.619 5.77 0.00 32.79 5.36
4 5 6.516718 ACAATAATCTCACGTTCTAGATGGG 58.483 40.000 5.77 0.00 32.79 4.00
26 27 1.781025 CGCTTGCGAACCCAAGAACA 61.781 55.000 9.60 0.00 43.79 3.18
27 28 1.082104 CGCTTGCGAACCCAAGAAC 60.082 57.895 9.60 0.00 43.79 3.01
29 30 0.248012 TATCGCTTGCGAACCCAAGA 59.752 50.000 21.35 0.00 43.79 3.02
38 39 4.864916 ATGCCTATATTTATCGCTTGCG 57.135 40.909 8.87 8.87 0.00 4.85
63 64 1.904144 TAGACGCAGATAACGTGTGC 58.096 50.000 0.00 0.00 45.24 4.57
69 70 4.442733 GTGCAAGAGATAGACGCAGATAAC 59.557 45.833 0.00 0.00 32.31 1.89
81 82 0.461548 CTCGCCAGGTGCAAGAGATA 59.538 55.000 0.00 0.00 41.33 1.98
153 154 7.819415 GGGTTCATTTCCTTCTTCAAAAATAGG 59.181 37.037 0.00 0.00 0.00 2.57
184 185 5.308237 AGAGGACCACAAGGATAATATGTCC 59.692 44.000 0.00 0.00 41.00 4.02
185 186 6.042093 TCAGAGGACCACAAGGATAATATGTC 59.958 42.308 0.00 0.00 38.69 3.06
186 187 5.905331 TCAGAGGACCACAAGGATAATATGT 59.095 40.000 0.00 0.00 38.69 2.29
223 224 6.825721 ACTCCAGCAGAATAGGAAAATACTTG 59.174 38.462 0.00 0.00 0.00 3.16
230 235 2.305635 TGCACTCCAGCAGAATAGGAAA 59.694 45.455 0.00 0.00 40.11 3.13
231 236 1.908619 TGCACTCCAGCAGAATAGGAA 59.091 47.619 0.00 0.00 40.11 3.36
241 246 0.804989 GTGGTACAATGCACTCCAGC 59.195 55.000 0.00 0.00 44.16 4.85
242 247 1.271325 TGGTGGTACAATGCACTCCAG 60.271 52.381 0.00 0.00 44.16 3.86
243 248 0.767998 TGGTGGTACAATGCACTCCA 59.232 50.000 0.00 0.00 44.16 3.86
249 255 1.969064 TGGCGTGGTGGTACAATGC 60.969 57.895 0.00 0.00 44.16 3.56
276 285 1.337703 CATGGACCAATAATGCCGTGG 59.662 52.381 0.00 0.00 38.46 4.94
300 309 9.765795 GGTCTTAAACACTGAGCATAATAGTAT 57.234 33.333 0.00 0.00 0.00 2.12
301 310 8.202137 GGGTCTTAAACACTGAGCATAATAGTA 58.798 37.037 0.00 0.00 0.00 1.82
302 311 7.048512 GGGTCTTAAACACTGAGCATAATAGT 58.951 38.462 0.00 0.00 0.00 2.12
303 312 7.011482 GTGGGTCTTAAACACTGAGCATAATAG 59.989 40.741 0.00 0.00 30.14 1.73
304 313 6.821665 GTGGGTCTTAAACACTGAGCATAATA 59.178 38.462 0.00 0.00 30.14 0.98
305 314 5.648092 GTGGGTCTTAAACACTGAGCATAAT 59.352 40.000 0.00 0.00 30.14 1.28
306 315 5.001232 GTGGGTCTTAAACACTGAGCATAA 58.999 41.667 0.00 0.00 30.14 1.90
308 317 3.181445 TGTGGGTCTTAAACACTGAGCAT 60.181 43.478 0.00 0.00 36.16 3.79
309 318 2.171659 TGTGGGTCTTAAACACTGAGCA 59.828 45.455 0.00 0.00 36.16 4.26
310 319 2.846193 TGTGGGTCTTAAACACTGAGC 58.154 47.619 0.00 0.00 36.16 4.26
311 320 4.451900 ACTTGTGGGTCTTAAACACTGAG 58.548 43.478 0.00 0.00 36.16 3.35
313 322 6.231211 AGATACTTGTGGGTCTTAAACACTG 58.769 40.000 0.00 0.00 36.16 3.66
314 323 6.435292 AGATACTTGTGGGTCTTAAACACT 57.565 37.500 0.00 0.00 36.16 3.55
317 326 5.106277 GGCAAGATACTTGTGGGTCTTAAAC 60.106 44.000 12.07 0.00 30.29 2.01
328 337 4.080356 TGAATAGCCAGGCAAGATACTTGT 60.080 41.667 15.80 0.00 0.00 3.16
329 338 4.454678 TGAATAGCCAGGCAAGATACTTG 58.545 43.478 15.80 7.07 0.00 3.16
331 340 4.410228 TCTTGAATAGCCAGGCAAGATACT 59.590 41.667 15.80 0.00 41.08 2.12
348 357 5.472148 CAATACCTGCAAAATGCTCTTGAA 58.528 37.500 3.78 0.00 45.31 2.69
349 358 4.082081 CCAATACCTGCAAAATGCTCTTGA 60.082 41.667 3.78 0.00 45.31 3.02
362 371 3.670627 CGAGTCTTTTTGCCAATACCTGC 60.671 47.826 0.00 0.00 0.00 4.85
364 373 3.751518 ACGAGTCTTTTTGCCAATACCT 58.248 40.909 0.00 0.00 0.00 3.08
365 374 5.813080 ATACGAGTCTTTTTGCCAATACC 57.187 39.130 0.00 0.00 0.00 2.73
368 377 4.933400 ACGTATACGAGTCTTTTTGCCAAT 59.067 37.500 30.77 0.06 43.02 3.16
382 391 0.041926 CATGCGGACGACGTATACGA 60.042 55.000 30.77 6.88 46.32 3.43
397 406 2.817258 TGCTTACAAGTTACCACCATGC 59.183 45.455 0.00 0.00 0.00 4.06
403 412 6.399743 TGACGATATTGCTTACAAGTTACCA 58.600 36.000 0.00 0.00 39.69 3.25
438 465 3.610911 GATCGGGGTCACTTTCAATCTT 58.389 45.455 0.00 0.00 0.00 2.40
441 468 1.406887 CCGATCGGGGTCACTTTCAAT 60.407 52.381 26.95 0.00 0.00 2.57
448 475 3.809374 GATGGCCGATCGGGGTCAC 62.809 68.421 33.98 17.45 46.06 3.67
462 489 0.107993 TTCAGCCTTCAGAGCGATGG 60.108 55.000 0.00 0.00 41.05 3.51
463 490 1.288350 CTTCAGCCTTCAGAGCGATG 58.712 55.000 0.00 0.00 34.64 3.84
464 491 0.177604 CCTTCAGCCTTCAGAGCGAT 59.822 55.000 0.00 0.00 34.64 4.58
465 492 1.593787 CCTTCAGCCTTCAGAGCGA 59.406 57.895 0.00 0.00 34.64 4.93
467 494 0.744057 GAGCCTTCAGCCTTCAGAGC 60.744 60.000 0.00 0.00 45.47 4.09
468 495 0.903942 AGAGCCTTCAGCCTTCAGAG 59.096 55.000 0.00 0.00 45.47 3.35
471 498 0.322975 GTCAGAGCCTTCAGCCTTCA 59.677 55.000 0.00 0.00 45.47 3.02
472 499 0.392327 GGTCAGAGCCTTCAGCCTTC 60.392 60.000 0.00 0.00 45.47 3.46
473 500 1.682257 GGTCAGAGCCTTCAGCCTT 59.318 57.895 0.00 0.00 45.47 4.35
474 501 2.297129 GGGTCAGAGCCTTCAGCCT 61.297 63.158 11.76 0.00 45.47 4.58
475 502 2.129555 TTGGGTCAGAGCCTTCAGCC 62.130 60.000 19.59 0.00 45.47 4.85
476 503 0.676151 CTTGGGTCAGAGCCTTCAGC 60.676 60.000 19.59 0.00 44.25 4.26
492 519 6.316390 AGTCACACTTCCAGAAAACTTACTTG 59.684 38.462 0.00 0.00 0.00 3.16
494 521 5.990668 AGTCACACTTCCAGAAAACTTACT 58.009 37.500 0.00 0.00 0.00 2.24
495 522 7.656137 TCATAGTCACACTTCCAGAAAACTTAC 59.344 37.037 0.00 0.00 0.00 2.34
514 541 9.171877 AGAAAATCTTGAAAGTCCATCATAGTC 57.828 33.333 0.00 0.00 0.00 2.59
517 544 8.733458 CACAGAAAATCTTGAAAGTCCATCATA 58.267 33.333 0.00 0.00 0.00 2.15
526 553 4.222114 GGCGACACAGAAAATCTTGAAAG 58.778 43.478 0.00 0.00 0.00 2.62
539 566 0.957395 ATTCCTTGCTGGCGACACAG 60.957 55.000 0.00 0.00 41.41 3.66
546 573 2.159379 CGGTTTAGAATTCCTTGCTGGC 60.159 50.000 0.65 0.00 35.26 4.85
547 574 3.343617 TCGGTTTAGAATTCCTTGCTGG 58.656 45.455 0.65 0.00 37.10 4.85
548 575 5.371115 TTTCGGTTTAGAATTCCTTGCTG 57.629 39.130 0.65 0.00 0.00 4.41
549 576 6.183360 TGTTTTTCGGTTTAGAATTCCTTGCT 60.183 34.615 0.65 0.00 0.00 3.91
550 577 5.980715 TGTTTTTCGGTTTAGAATTCCTTGC 59.019 36.000 0.65 0.00 0.00 4.01
551 578 7.995463 TTGTTTTTCGGTTTAGAATTCCTTG 57.005 32.000 0.65 0.00 0.00 3.61
552 579 8.875803 GTTTTGTTTTTCGGTTTAGAATTCCTT 58.124 29.630 0.65 0.00 0.00 3.36
553 580 8.035984 TGTTTTGTTTTTCGGTTTAGAATTCCT 58.964 29.630 0.65 0.00 0.00 3.36
554 581 8.187354 TGTTTTGTTTTTCGGTTTAGAATTCC 57.813 30.769 0.65 0.00 0.00 3.01
557 584 8.536407 CGATTGTTTTGTTTTTCGGTTTAGAAT 58.464 29.630 0.00 0.00 0.00 2.40
558 585 7.541437 ACGATTGTTTTGTTTTTCGGTTTAGAA 59.459 29.630 0.00 0.00 0.00 2.10
559 586 7.028361 ACGATTGTTTTGTTTTTCGGTTTAGA 58.972 30.769 0.00 0.00 0.00 2.10
560 587 7.212032 ACGATTGTTTTGTTTTTCGGTTTAG 57.788 32.000 0.00 0.00 0.00 1.85
561 588 8.679288 TTACGATTGTTTTGTTTTTCGGTTTA 57.321 26.923 0.00 0.00 0.00 2.01
562 589 7.578169 TTACGATTGTTTTGTTTTTCGGTTT 57.422 28.000 0.00 0.00 0.00 3.27
563 590 7.758613 ATTACGATTGTTTTGTTTTTCGGTT 57.241 28.000 0.00 0.00 0.00 4.44
564 591 8.907685 CATATTACGATTGTTTTGTTTTTCGGT 58.092 29.630 0.00 0.00 0.00 4.69
565 592 8.907685 ACATATTACGATTGTTTTGTTTTTCGG 58.092 29.630 0.00 0.00 0.00 4.30
566 593 9.706996 CACATATTACGATTGTTTTGTTTTTCG 57.293 29.630 0.00 0.00 0.00 3.46
569 596 8.911662 GCTCACATATTACGATTGTTTTGTTTT 58.088 29.630 0.00 0.00 0.00 2.43
570 597 7.540745 GGCTCACATATTACGATTGTTTTGTTT 59.459 33.333 0.00 0.00 0.00 2.83
571 598 7.027161 GGCTCACATATTACGATTGTTTTGTT 58.973 34.615 0.00 0.00 0.00 2.83
572 599 6.150307 TGGCTCACATATTACGATTGTTTTGT 59.850 34.615 0.00 0.00 0.00 2.83
573 600 6.550843 TGGCTCACATATTACGATTGTTTTG 58.449 36.000 0.00 0.00 0.00 2.44
574 601 6.751514 TGGCTCACATATTACGATTGTTTT 57.248 33.333 0.00 0.00 0.00 2.43
575 602 6.318648 ACATGGCTCACATATTACGATTGTTT 59.681 34.615 0.00 0.00 37.84 2.83
576 603 5.822519 ACATGGCTCACATATTACGATTGTT 59.177 36.000 0.00 0.00 37.84 2.83
577 604 5.237127 CACATGGCTCACATATTACGATTGT 59.763 40.000 0.00 0.00 37.84 2.71
578 605 5.237127 ACACATGGCTCACATATTACGATTG 59.763 40.000 0.00 0.00 37.84 2.67
579 606 5.368145 ACACATGGCTCACATATTACGATT 58.632 37.500 0.00 0.00 37.84 3.34
580 607 4.960938 ACACATGGCTCACATATTACGAT 58.039 39.130 0.00 0.00 37.84 3.73
581 608 4.142049 TGACACATGGCTCACATATTACGA 60.142 41.667 0.00 0.00 37.84 3.43
582 609 4.119136 TGACACATGGCTCACATATTACG 58.881 43.478 0.00 0.00 37.84 3.18
583 610 5.759763 TGATGACACATGGCTCACATATTAC 59.240 40.000 0.00 0.00 37.84 1.89
584 611 5.759763 GTGATGACACATGGCTCACATATTA 59.240 40.000 10.59 0.00 45.32 0.98
585 612 4.577693 GTGATGACACATGGCTCACATATT 59.422 41.667 10.59 0.00 45.32 1.28
586 613 4.132336 GTGATGACACATGGCTCACATAT 58.868 43.478 10.59 0.00 45.32 1.78
587 614 3.534554 GTGATGACACATGGCTCACATA 58.465 45.455 10.59 0.00 45.32 2.29
588 615 2.362736 GTGATGACACATGGCTCACAT 58.637 47.619 10.59 0.00 45.32 3.21
589 616 1.812235 GTGATGACACATGGCTCACA 58.188 50.000 10.59 0.00 45.32 3.58
618 645 0.509499 CGTACGCGGAATGTGTGTTT 59.491 50.000 12.47 0.00 42.47 2.83
620 647 0.240678 TACGTACGCGGAATGTGTGT 59.759 50.000 16.72 0.00 42.47 3.72
641 668 1.005748 CTGCCGTCTGAGCACTTCA 60.006 57.895 0.00 0.00 36.01 3.02
647 674 0.178068 TTAATCCCTGCCGTCTGAGC 59.822 55.000 0.00 0.00 0.00 4.26
652 679 1.093496 CCGGTTTAATCCCTGCCGTC 61.093 60.000 0.00 0.00 40.70 4.79
657 684 1.373590 CCGTGCCGGTTTAATCCCTG 61.374 60.000 1.90 0.00 42.73 4.45
658 685 1.078001 CCGTGCCGGTTTAATCCCT 60.078 57.895 1.90 0.00 42.73 4.20
676 703 6.052840 TCGTTACATTAGATCGGTAGTGTC 57.947 41.667 0.00 0.00 0.00 3.67
677 704 6.261603 TCATCGTTACATTAGATCGGTAGTGT 59.738 38.462 0.00 0.00 0.00 3.55
678 705 6.665465 TCATCGTTACATTAGATCGGTAGTG 58.335 40.000 0.00 0.00 0.00 2.74
679 706 6.568081 GCTCATCGTTACATTAGATCGGTAGT 60.568 42.308 0.00 0.00 0.00 2.73
680 707 5.795939 GCTCATCGTTACATTAGATCGGTAG 59.204 44.000 0.00 0.00 0.00 3.18
694 723 0.388778 TGCCGTTTCGCTCATCGTTA 60.389 50.000 0.00 0.00 39.67 3.18
695 724 1.225376 TTGCCGTTTCGCTCATCGTT 61.225 50.000 0.00 0.00 39.67 3.85
696 725 1.666553 TTGCCGTTTCGCTCATCGT 60.667 52.632 0.00 0.00 39.67 3.73
705 734 1.135402 GTCATCATGGGTTGCCGTTTC 60.135 52.381 0.00 0.00 0.00 2.78
721 750 0.249073 GCACGGATCGCTAGTGTCAT 60.249 55.000 2.66 0.00 38.10 3.06
722 751 1.138883 GCACGGATCGCTAGTGTCA 59.861 57.895 2.66 0.00 38.10 3.58
724 753 1.676678 ATGGCACGGATCGCTAGTGT 61.677 55.000 2.66 0.00 38.10 3.55
725 754 0.530650 AATGGCACGGATCGCTAGTG 60.531 55.000 0.00 0.00 38.77 2.74
726 755 0.530650 CAATGGCACGGATCGCTAGT 60.531 55.000 0.00 0.00 0.00 2.57
728 757 1.227527 CCAATGGCACGGATCGCTA 60.228 57.895 0.00 0.00 0.00 4.26
730 759 2.824041 ACCAATGGCACGGATCGC 60.824 61.111 11.55 0.00 0.00 4.58
737 770 0.745845 AGATCGAGCACCAATGGCAC 60.746 55.000 2.38 0.00 0.00 5.01
757 790 3.195698 GCGTTGATCTGGGCCGTC 61.196 66.667 0.00 0.00 0.00 4.79
944 983 0.392729 CAGAGGAGAAAGCAGGGCAG 60.393 60.000 0.00 0.00 0.00 4.85
1071 1110 4.570663 GACAGGTCGATCGCCCGG 62.571 72.222 13.80 13.80 0.00 5.73
1330 1369 2.044946 GGTGACCCCCAGCATGAC 60.045 66.667 0.00 0.00 42.56 3.06
1378 1417 2.047274 CGGCAATGTCCAGGACGT 60.047 61.111 15.24 12.13 34.95 4.34
1443 1485 2.717809 GAGCGAACGAACTCACCGC 61.718 63.158 0.00 0.00 45.39 5.68
1477 1519 2.032924 GGAGGGCGCATGTAAAATGTAC 59.967 50.000 10.83 0.00 0.00 2.90
1478 1520 2.294074 GGAGGGCGCATGTAAAATGTA 58.706 47.619 10.83 0.00 0.00 2.29
1601 1661 0.940833 TCGAACACGCATTTTGAGCA 59.059 45.000 0.00 0.00 0.00 4.26
1709 1775 0.035739 TCGTGTTTTAGGGACCTGGC 59.964 55.000 0.00 0.00 0.00 4.85
1710 1776 2.423577 CTTCGTGTTTTAGGGACCTGG 58.576 52.381 0.00 0.00 0.00 4.45
1712 1778 1.697982 AGCTTCGTGTTTTAGGGACCT 59.302 47.619 0.00 0.00 0.00 3.85
1713 1779 1.804748 CAGCTTCGTGTTTTAGGGACC 59.195 52.381 0.00 0.00 0.00 4.46
1714 1780 2.223377 CACAGCTTCGTGTTTTAGGGAC 59.777 50.000 0.00 0.00 32.00 4.46
1715 1781 2.489971 CACAGCTTCGTGTTTTAGGGA 58.510 47.619 0.00 0.00 32.00 4.20
1716 1782 1.535462 CCACAGCTTCGTGTTTTAGGG 59.465 52.381 3.74 0.00 34.98 3.53
1718 1784 2.489971 TCCCACAGCTTCGTGTTTTAG 58.510 47.619 3.74 0.00 34.98 1.85
1719 1785 2.623878 TCCCACAGCTTCGTGTTTTA 57.376 45.000 3.74 0.00 34.98 1.52
1720 1786 1.981256 ATCCCACAGCTTCGTGTTTT 58.019 45.000 3.74 0.00 34.98 2.43
1721 1787 1.981256 AATCCCACAGCTTCGTGTTT 58.019 45.000 3.74 0.00 34.98 2.83
1747 1840 7.884816 TTCAGGAACTCTAAACTATTCAACG 57.115 36.000 0.00 0.00 34.60 4.10
1750 1844 7.936847 TGCTTTTCAGGAACTCTAAACTATTCA 59.063 33.333 0.00 0.00 34.60 2.57
1760 1854 6.469782 TCAAATTTGCTTTTCAGGAACTCT 57.530 33.333 13.54 0.00 34.60 3.24
1762 1856 7.920160 TTTTCAAATTTGCTTTTCAGGAACT 57.080 28.000 13.54 0.00 43.88 3.01
1789 1895 5.427481 ACCTTATCCACGGAAATTCTCCTTA 59.573 40.000 0.00 0.00 42.85 2.69
1796 1905 2.914059 CCGACCTTATCCACGGAAATT 58.086 47.619 0.00 0.00 46.94 1.82
2086 2231 4.736126 TGTCAAAAGAGATGCGGATAGA 57.264 40.909 0.00 0.00 0.00 1.98
2123 2268 0.447406 CAATGCATTTCTCGGCGACA 59.553 50.000 9.83 0.86 0.00 4.35
2129 2274 7.166970 CCAAAATATCACTCAATGCATTTCTCG 59.833 37.037 9.83 0.00 0.00 4.04
2132 2277 7.010738 CCACCAAAATATCACTCAATGCATTTC 59.989 37.037 9.83 0.00 0.00 2.17
2141 2289 7.595819 AAAAAGACCACCAAAATATCACTCA 57.404 32.000 0.00 0.00 0.00 3.41
2313 2464 1.294459 GGTAGTGGTTCACCCGGAC 59.706 63.158 0.73 0.00 34.49 4.79
2423 2574 2.818132 CAGATCTCCAGCCCGGAC 59.182 66.667 0.73 0.00 39.64 4.79
2478 2629 0.038526 TTGACGAAGAAGGAGTCGGC 60.039 55.000 0.00 0.00 45.74 5.54
2527 2678 4.778415 AGCAGCGCGACGTGTAGG 62.778 66.667 12.10 1.28 0.00 3.18
2528 2679 3.241059 GAGCAGCGCGACGTGTAG 61.241 66.667 12.10 4.18 0.00 2.74
2529 2680 4.771356 GGAGCAGCGCGACGTGTA 62.771 66.667 12.10 0.00 0.00 2.90
2563 2714 2.163010 CGTGTAGGTGTAGGTGTAGGTG 59.837 54.545 0.00 0.00 0.00 4.00
2564 2715 2.440409 CGTGTAGGTGTAGGTGTAGGT 58.560 52.381 0.00 0.00 0.00 3.08
2565 2716 1.747355 CCGTGTAGGTGTAGGTGTAGG 59.253 57.143 0.00 0.00 34.51 3.18
2576 2727 4.625083 GAGAAGTACTCCTACCGTGTAGGT 60.625 50.000 21.98 11.73 46.60 3.08
2614 2774 2.052782 TCTAGAGTAGCATGCACCGA 57.947 50.000 21.98 3.21 0.00 4.69
2627 2787 2.361757 ACAGCAGTAGCAGCATCTAGAG 59.638 50.000 0.00 0.00 45.49 2.43
2628 2788 2.382882 ACAGCAGTAGCAGCATCTAGA 58.617 47.619 0.00 0.00 45.49 2.43
2630 2790 2.897436 CAACAGCAGTAGCAGCATCTA 58.103 47.619 0.00 0.00 45.49 1.98
2632 2792 0.098376 GCAACAGCAGTAGCAGCATC 59.902 55.000 0.00 0.00 45.49 3.91
2633 2793 0.607217 TGCAACAGCAGTAGCAGCAT 60.607 50.000 0.00 0.00 45.49 3.79
2634 2794 1.227913 TGCAACAGCAGTAGCAGCA 60.228 52.632 0.00 0.00 45.49 4.41
2635 2795 1.208614 GTGCAACAGCAGTAGCAGC 59.791 57.895 0.00 0.00 45.49 5.25
2636 2796 1.224069 ACGTGCAACAGCAGTAGCAG 61.224 55.000 0.00 0.00 45.49 4.24
2644 2804 2.031683 AGTAAAAGTGACGTGCAACAGC 59.968 45.455 0.00 0.00 35.74 4.40
2671 2831 4.894201 CCTGGAGATCCATGCACC 57.106 61.111 1.15 0.00 46.46 5.01
2675 2835 1.301558 GCTCGCCTGGAGATCCATG 60.302 63.158 1.15 0.61 46.46 3.66
2676 2836 1.340399 TTGCTCGCCTGGAGATCCAT 61.340 55.000 1.15 0.00 46.46 3.41
2697 2867 6.305160 CACTGATCATTATTGACTCGATCTCG 59.695 42.308 0.00 0.00 36.16 4.04
2698 2868 6.089283 GCACTGATCATTATTGACTCGATCTC 59.911 42.308 0.00 0.00 34.80 2.75
2937 3135 7.652909 AGTCTCTGCGTAGTAGTAATACTAGTG 59.347 40.741 15.94 7.56 42.21 2.74
2938 3136 7.725251 AGTCTCTGCGTAGTAGTAATACTAGT 58.275 38.462 10.22 11.97 42.21 2.57
2939 3137 9.345517 CTAGTCTCTGCGTAGTAGTAATACTAG 57.654 40.741 10.22 6.43 42.21 2.57
2940 3138 8.855110 ACTAGTCTCTGCGTAGTAGTAATACTA 58.145 37.037 5.98 5.98 42.21 1.82
2941 3139 7.725251 ACTAGTCTCTGCGTAGTAGTAATACT 58.275 38.462 8.10 8.10 42.21 2.12
2942 3140 7.945033 ACTAGTCTCTGCGTAGTAGTAATAC 57.055 40.000 0.00 0.00 42.21 1.89
2944 3142 7.551974 TGAAACTAGTCTCTGCGTAGTAGTAAT 59.448 37.037 0.00 0.00 42.21 1.89
2946 3144 6.401394 TGAAACTAGTCTCTGCGTAGTAGTA 58.599 40.000 0.00 0.00 42.21 1.82
2947 3145 5.243981 TGAAACTAGTCTCTGCGTAGTAGT 58.756 41.667 0.00 0.00 42.21 2.73
2950 3148 3.440872 CCTGAAACTAGTCTCTGCGTAGT 59.559 47.826 0.00 0.00 0.00 2.73
2951 3149 3.440872 ACCTGAAACTAGTCTCTGCGTAG 59.559 47.826 0.00 0.00 0.00 3.51
2952 3150 3.190744 CACCTGAAACTAGTCTCTGCGTA 59.809 47.826 0.00 0.00 0.00 4.42
2953 3151 2.029828 CACCTGAAACTAGTCTCTGCGT 60.030 50.000 0.00 0.00 0.00 5.24
2954 3152 2.600731 CACCTGAAACTAGTCTCTGCG 58.399 52.381 0.00 0.00 0.00 5.18
2955 3153 2.289072 TGCACCTGAAACTAGTCTCTGC 60.289 50.000 0.00 0.00 0.00 4.26
2956 3154 3.667497 TGCACCTGAAACTAGTCTCTG 57.333 47.619 0.00 0.00 0.00 3.35
2957 3155 3.553096 CGTTGCACCTGAAACTAGTCTCT 60.553 47.826 0.00 0.00 31.29 3.10
3084 3321 2.109181 GGCCCCCGAAGAAGATCG 59.891 66.667 0.00 0.00 42.37 3.69
3263 3504 0.814457 AAGCTAGTCTCTGTCAGGCG 59.186 55.000 0.00 0.00 0.00 5.52
3271 3512 0.961358 ACGCACGGAAGCTAGTCTCT 60.961 55.000 0.00 0.00 0.00 3.10
3272 3513 0.109226 AACGCACGGAAGCTAGTCTC 60.109 55.000 0.00 0.00 0.00 3.36
3331 3574 2.637382 ACTATGACCATGACCACACACA 59.363 45.455 0.00 0.00 0.00 3.72
3332 3575 3.334583 ACTATGACCATGACCACACAC 57.665 47.619 0.00 0.00 0.00 3.82
3333 3576 5.012664 AGTTAACTATGACCATGACCACACA 59.987 40.000 6.26 0.00 0.00 3.72
3334 3577 5.488341 AGTTAACTATGACCATGACCACAC 58.512 41.667 6.26 0.00 0.00 3.82
3335 3578 5.755409 AGTTAACTATGACCATGACCACA 57.245 39.130 6.26 0.00 0.00 4.17
3336 3579 7.985184 TCATTAGTTAACTATGACCATGACCAC 59.015 37.037 15.92 0.00 0.00 4.16
3339 3585 8.552034 GCTTCATTAGTTAACTATGACCATGAC 58.448 37.037 19.54 10.54 0.00 3.06
3345 3591 5.465724 CGGGGCTTCATTAGTTAACTATGAC 59.534 44.000 15.92 10.14 0.00 3.06
3348 3594 4.657039 TCCGGGGCTTCATTAGTTAACTAT 59.343 41.667 15.92 4.29 0.00 2.12
3368 3614 1.260561 CGGGAGCGTTTTGAATATCCG 59.739 52.381 0.00 0.00 0.00 4.18
3370 3616 2.538939 GCACGGGAGCGTTTTGAATATC 60.539 50.000 0.00 0.00 0.00 1.63
3371 3617 1.400494 GCACGGGAGCGTTTTGAATAT 59.600 47.619 0.00 0.00 0.00 1.28
3372 3618 0.800012 GCACGGGAGCGTTTTGAATA 59.200 50.000 0.00 0.00 0.00 1.75
3373 3619 1.169661 TGCACGGGAGCGTTTTGAAT 61.170 50.000 0.00 0.00 37.31 2.57
3375 3621 2.203084 TGCACGGGAGCGTTTTGA 60.203 55.556 0.00 0.00 37.31 2.69
3376 3622 2.051345 GTGCACGGGAGCGTTTTG 60.051 61.111 0.00 0.00 37.31 2.44
3411 4079 0.319555 TCTCAACGACAAAGAGGCCG 60.320 55.000 0.00 0.00 0.00 6.13
3416 4084 4.202212 TGGTCTCATTCTCAACGACAAAGA 60.202 41.667 0.00 0.00 0.00 2.52
3421 4089 2.028930 AGGTGGTCTCATTCTCAACGAC 60.029 50.000 0.00 0.00 0.00 4.34
3426 4094 3.242867 ACAAGAGGTGGTCTCATTCTCA 58.757 45.455 0.00 0.00 44.81 3.27
3449 4117 2.660258 ATTGTGAGATACGGGCCGGC 62.660 60.000 31.78 21.18 0.00 6.13
3450 4118 0.677288 TATTGTGAGATACGGGCCGG 59.323 55.000 31.78 12.53 0.00 6.13
3477 4155 8.910351 AGCCTTACAGTTCAAATAGGAATATC 57.090 34.615 0.00 0.00 0.00 1.63
3484 4162 5.491982 AGGTGAGCCTTACAGTTCAAATAG 58.508 41.667 0.00 0.00 44.18 1.73
3501 4179 5.815740 ACCTTTATGTGCGTAATAAGGTGAG 59.184 40.000 10.45 0.00 0.00 3.51
3504 4182 7.201670 GCTTTACCTTTATGTGCGTAATAAGGT 60.202 37.037 14.28 14.28 31.64 3.50
3517 4195 8.250332 TGCTTTTCTAATGGCTTTACCTTTATG 58.750 33.333 0.00 0.00 37.41 1.90
3537 4215 1.620323 GAGGGAAATGCACCTGCTTTT 59.380 47.619 10.09 10.09 46.58 2.27
3538 4216 1.260544 GAGGGAAATGCACCTGCTTT 58.739 50.000 0.00 0.00 42.66 3.51
3539 4217 0.112995 TGAGGGAAATGCACCTGCTT 59.887 50.000 0.00 0.00 42.66 3.91
3540 4218 0.112995 TTGAGGGAAATGCACCTGCT 59.887 50.000 0.00 0.00 42.66 4.24
3541 4219 0.968405 TTTGAGGGAAATGCACCTGC 59.032 50.000 0.00 0.00 37.18 4.85
3542 4220 3.749665 TTTTTGAGGGAAATGCACCTG 57.250 42.857 0.00 0.00 37.18 4.00
3570 4248 4.405116 TCATGCACCTGCTTTTCTTTTT 57.595 36.364 0.00 0.00 42.66 1.94
3571 4249 4.405116 TTCATGCACCTGCTTTTCTTTT 57.595 36.364 0.00 0.00 42.66 2.27
3572 4250 4.099881 TCTTTCATGCACCTGCTTTTCTTT 59.900 37.500 0.00 0.00 42.66 2.52
3573 4251 3.638160 TCTTTCATGCACCTGCTTTTCTT 59.362 39.130 0.00 0.00 42.66 2.52
3646 4324 1.159285 GGCCTCCAAAAGCAATTTGC 58.841 50.000 13.55 13.55 45.79 3.68
3647 4325 1.000731 TCGGCCTCCAAAAGCAATTTG 59.999 47.619 0.00 7.75 46.54 2.32
3648 4326 1.273327 CTCGGCCTCCAAAAGCAATTT 59.727 47.619 0.00 0.00 0.00 1.82
3649 4327 0.890683 CTCGGCCTCCAAAAGCAATT 59.109 50.000 0.00 0.00 0.00 2.32
3650 4328 1.598701 GCTCGGCCTCCAAAAGCAAT 61.599 55.000 0.00 0.00 33.21 3.56
3651 4329 2.268076 GCTCGGCCTCCAAAAGCAA 61.268 57.895 0.00 0.00 33.21 3.91
3652 4330 2.672996 GCTCGGCCTCCAAAAGCA 60.673 61.111 0.00 0.00 33.21 3.91
3653 4331 2.360475 AGCTCGGCCTCCAAAAGC 60.360 61.111 0.00 0.00 0.00 3.51
3654 4332 3.896479 GAGCTCGGCCTCCAAAAG 58.104 61.111 0.00 0.00 0.00 2.27
3660 4338 3.157252 TCCATGGAGCTCGGCCTC 61.157 66.667 11.44 0.00 0.00 4.70
3661 4339 3.160047 CTCCATGGAGCTCGGCCT 61.160 66.667 28.45 0.00 35.31 5.19
3662 4340 3.157252 TCTCCATGGAGCTCGGCC 61.157 66.667 33.39 0.00 41.71 6.13
3663 4341 2.107953 GTCTCCATGGAGCTCGGC 59.892 66.667 33.39 17.57 41.71 5.54
3664 4342 2.801631 GGGTCTCCATGGAGCTCGG 61.802 68.421 33.39 13.90 41.71 4.63
3665 4343 2.801631 GGGGTCTCCATGGAGCTCG 61.802 68.421 33.39 14.29 41.71 5.03
3666 4344 2.447714 GGGGGTCTCCATGGAGCTC 61.448 68.421 33.39 26.71 41.71 4.09
3667 4345 2.367512 GGGGGTCTCCATGGAGCT 60.368 66.667 33.39 0.00 41.71 4.09
3668 4346 1.863155 TTTGGGGGTCTCCATGGAGC 61.863 60.000 33.39 26.64 41.71 4.70
3669 4347 0.929244 ATTTGGGGGTCTCCATGGAG 59.071 55.000 32.60 32.60 43.21 3.86
3670 4348 0.630673 CATTTGGGGGTCTCCATGGA 59.369 55.000 15.27 15.27 36.58 3.41
3671 4349 1.044790 GCATTTGGGGGTCTCCATGG 61.045 60.000 4.97 4.97 36.58 3.66
3672 4350 0.324552 TGCATTTGGGGGTCTCCATG 60.325 55.000 0.00 0.00 36.58 3.66
3673 4351 0.413037 TTGCATTTGGGGGTCTCCAT 59.587 50.000 0.00 0.00 36.58 3.41
3674 4352 0.189574 TTTGCATTTGGGGGTCTCCA 59.810 50.000 0.00 0.00 37.22 3.86
3675 4353 1.347062 TTTTGCATTTGGGGGTCTCC 58.653 50.000 0.00 0.00 0.00 3.71
3676 4354 3.007831 TGATTTTTGCATTTGGGGGTCTC 59.992 43.478 0.00 0.00 0.00 3.36
3677 4355 2.978278 TGATTTTTGCATTTGGGGGTCT 59.022 40.909 0.00 0.00 0.00 3.85
3678 4356 3.415457 TGATTTTTGCATTTGGGGGTC 57.585 42.857 0.00 0.00 0.00 4.46
3679 4357 3.872459 TTGATTTTTGCATTTGGGGGT 57.128 38.095 0.00 0.00 0.00 4.95
3680 4358 5.725325 AATTTGATTTTTGCATTTGGGGG 57.275 34.783 0.00 0.00 0.00 5.40
3681 4359 5.857517 CGAAATTTGATTTTTGCATTTGGGG 59.142 36.000 0.00 0.00 31.47 4.96
3682 4360 6.437094 ACGAAATTTGATTTTTGCATTTGGG 58.563 32.000 0.00 0.00 31.47 4.12
3683 4361 9.443283 TTTACGAAATTTGATTTTTGCATTTGG 57.557 25.926 0.00 0.00 31.47 3.28
3746 4424 9.499479 CACTATGCCTTCATCTATCTTTGTATT 57.501 33.333 0.00 0.00 34.22 1.89
3747 4425 7.605691 GCACTATGCCTTCATCTATCTTTGTAT 59.394 37.037 0.00 0.00 37.42 2.29
3748 4426 6.931281 GCACTATGCCTTCATCTATCTTTGTA 59.069 38.462 0.00 0.00 37.42 2.41
3749 4427 5.762218 GCACTATGCCTTCATCTATCTTTGT 59.238 40.000 0.00 0.00 37.42 2.83
3750 4428 5.761726 TGCACTATGCCTTCATCTATCTTTG 59.238 40.000 0.00 0.00 44.23 2.77
3751 4429 5.762218 GTGCACTATGCCTTCATCTATCTTT 59.238 40.000 10.32 0.00 44.23 2.52
3752 4430 5.163269 TGTGCACTATGCCTTCATCTATCTT 60.163 40.000 19.41 0.00 44.23 2.40
3753 4431 4.346127 TGTGCACTATGCCTTCATCTATCT 59.654 41.667 19.41 0.00 44.23 1.98
3754 4432 4.635223 TGTGCACTATGCCTTCATCTATC 58.365 43.478 19.41 0.00 44.23 2.08
3755 4433 4.694760 TGTGCACTATGCCTTCATCTAT 57.305 40.909 19.41 0.00 44.23 1.98
3756 4434 4.080919 ACTTGTGCACTATGCCTTCATCTA 60.081 41.667 19.41 0.00 44.23 1.98
3757 4435 3.276857 CTTGTGCACTATGCCTTCATCT 58.723 45.455 19.41 0.00 44.23 2.90
3758 4436 3.012518 ACTTGTGCACTATGCCTTCATC 58.987 45.455 19.41 0.00 44.23 2.92
3759 4437 2.751259 CACTTGTGCACTATGCCTTCAT 59.249 45.455 19.41 0.00 44.23 2.57
3760 4438 2.153645 CACTTGTGCACTATGCCTTCA 58.846 47.619 19.41 0.00 44.23 3.02
3761 4439 2.095567 CACACTTGTGCACTATGCCTTC 60.096 50.000 19.41 0.00 44.23 3.46
3762 4440 1.881973 CACACTTGTGCACTATGCCTT 59.118 47.619 19.41 0.00 44.23 4.35
3763 4441 1.527034 CACACTTGTGCACTATGCCT 58.473 50.000 19.41 0.00 44.23 4.75
3774 4452 7.556733 TCGTCCTAAAAATTTACACACTTGT 57.443 32.000 0.00 0.00 40.02 3.16
3775 4453 8.844441 TTTCGTCCTAAAAATTTACACACTTG 57.156 30.769 0.00 0.00 0.00 3.16
3778 4456 9.881529 TGTATTTCGTCCTAAAAATTTACACAC 57.118 29.630 0.00 0.00 0.00 3.82
3789 4467 8.673711 CCTCATTTCAATGTATTTCGTCCTAAA 58.326 33.333 0.00 0.00 37.65 1.85
3790 4468 7.282224 CCCTCATTTCAATGTATTTCGTCCTAA 59.718 37.037 0.00 0.00 37.65 2.69
3791 4469 6.765989 CCCTCATTTCAATGTATTTCGTCCTA 59.234 38.462 0.00 0.00 37.65 2.94
3792 4470 5.590259 CCCTCATTTCAATGTATTTCGTCCT 59.410 40.000 0.00 0.00 37.65 3.85
3793 4471 5.588648 TCCCTCATTTCAATGTATTTCGTCC 59.411 40.000 0.00 0.00 37.65 4.79
3794 4472 6.677781 TCCCTCATTTCAATGTATTTCGTC 57.322 37.500 0.00 0.00 37.65 4.20
3795 4473 6.603201 ACATCCCTCATTTCAATGTATTTCGT 59.397 34.615 0.00 0.00 37.65 3.85
3796 4474 6.914215 CACATCCCTCATTTCAATGTATTTCG 59.086 38.462 0.00 0.00 37.65 3.46
3797 4475 6.698766 GCACATCCCTCATTTCAATGTATTTC 59.301 38.462 0.00 0.00 37.65 2.17
3798 4476 6.154877 TGCACATCCCTCATTTCAATGTATTT 59.845 34.615 0.00 0.00 37.65 1.40
3799 4477 5.657745 TGCACATCCCTCATTTCAATGTATT 59.342 36.000 0.00 0.00 37.65 1.89
3800 4478 5.202765 TGCACATCCCTCATTTCAATGTAT 58.797 37.500 0.00 0.00 37.65 2.29
3801 4479 4.598022 TGCACATCCCTCATTTCAATGTA 58.402 39.130 0.00 0.00 37.65 2.29
3802 4480 3.433343 TGCACATCCCTCATTTCAATGT 58.567 40.909 0.00 0.00 37.65 2.71
3803 4481 4.459390 TTGCACATCCCTCATTTCAATG 57.541 40.909 0.00 0.00 37.75 2.82
3804 4482 5.486735 TTTTGCACATCCCTCATTTCAAT 57.513 34.783 0.00 0.00 0.00 2.57
3805 4483 4.952071 TTTTGCACATCCCTCATTTCAA 57.048 36.364 0.00 0.00 0.00 2.69
3806 4484 4.952071 TTTTTGCACATCCCTCATTTCA 57.048 36.364 0.00 0.00 0.00 2.69
3824 4502 9.098355 GTTAAAAAGCCTCAAATCTGTCTTTTT 57.902 29.630 12.91 12.91 42.61 1.94
3825 4503 8.257306 TGTTAAAAAGCCTCAAATCTGTCTTTT 58.743 29.630 0.00 0.00 35.89 2.27
3826 4504 7.706607 GTGTTAAAAAGCCTCAAATCTGTCTTT 59.293 33.333 0.00 0.00 0.00 2.52
3827 4505 7.147915 TGTGTTAAAAAGCCTCAAATCTGTCTT 60.148 33.333 0.00 0.00 0.00 3.01
3828 4506 6.321181 TGTGTTAAAAAGCCTCAAATCTGTCT 59.679 34.615 0.00 0.00 0.00 3.41
3829 4507 6.503524 TGTGTTAAAAAGCCTCAAATCTGTC 58.496 36.000 0.00 0.00 0.00 3.51
3830 4508 6.463995 TGTGTTAAAAAGCCTCAAATCTGT 57.536 33.333 0.00 0.00 0.00 3.41
3831 4509 7.147312 TCATGTGTTAAAAAGCCTCAAATCTG 58.853 34.615 0.00 0.00 0.00 2.90
3832 4510 7.288810 TCATGTGTTAAAAAGCCTCAAATCT 57.711 32.000 0.00 0.00 0.00 2.40
3833 4511 9.807649 ATATCATGTGTTAAAAAGCCTCAAATC 57.192 29.630 0.00 0.00 0.00 2.17
3849 4527 9.552695 TCTAGGAGGATGAATAATATCATGTGT 57.447 33.333 0.00 0.00 40.08 3.72
3854 4532 8.907885 CGTGATCTAGGAGGATGAATAATATCA 58.092 37.037 0.00 0.00 0.00 2.15
3855 4533 9.126151 TCGTGATCTAGGAGGATGAATAATATC 57.874 37.037 0.00 0.00 0.00 1.63
3856 4534 9.480861 TTCGTGATCTAGGAGGATGAATAATAT 57.519 33.333 0.00 0.00 0.00 1.28
3857 4535 8.879427 TTCGTGATCTAGGAGGATGAATAATA 57.121 34.615 0.00 0.00 0.00 0.98
3858 4536 7.782897 TTCGTGATCTAGGAGGATGAATAAT 57.217 36.000 0.00 0.00 0.00 1.28
3859 4537 7.782897 ATTCGTGATCTAGGAGGATGAATAA 57.217 36.000 0.00 0.00 0.00 1.40
3860 4538 7.782897 AATTCGTGATCTAGGAGGATGAATA 57.217 36.000 0.00 0.00 0.00 1.75
3861 4539 6.678568 AATTCGTGATCTAGGAGGATGAAT 57.321 37.500 0.00 0.00 0.00 2.57
3862 4540 6.127054 ACAAATTCGTGATCTAGGAGGATGAA 60.127 38.462 0.00 0.00 0.00 2.57
3863 4541 5.363868 ACAAATTCGTGATCTAGGAGGATGA 59.636 40.000 0.00 0.00 0.00 2.92
3864 4542 5.605534 ACAAATTCGTGATCTAGGAGGATG 58.394 41.667 0.00 0.00 0.00 3.51
3865 4543 5.600484 AGACAAATTCGTGATCTAGGAGGAT 59.400 40.000 0.00 0.00 0.00 3.24
3866 4544 4.956700 AGACAAATTCGTGATCTAGGAGGA 59.043 41.667 0.00 0.00 0.00 3.71
3867 4545 5.269505 AGACAAATTCGTGATCTAGGAGG 57.730 43.478 0.00 0.00 0.00 4.30
3868 4546 7.602517 AAAAGACAAATTCGTGATCTAGGAG 57.397 36.000 0.00 0.00 0.00 3.69
3869 4547 7.979444 AAAAAGACAAATTCGTGATCTAGGA 57.021 32.000 0.00 0.00 0.00 2.94
3890 4568 6.081049 CGTTGAAATGCGACCTGTATAAAAA 58.919 36.000 0.00 0.00 0.00 1.94
3891 4569 5.623335 CGTTGAAATGCGACCTGTATAAAA 58.377 37.500 0.00 0.00 0.00 1.52
3892 4570 4.436317 GCGTTGAAATGCGACCTGTATAAA 60.436 41.667 0.00 0.00 0.00 1.40
3893 4571 3.062909 GCGTTGAAATGCGACCTGTATAA 59.937 43.478 0.00 0.00 0.00 0.98
3894 4572 2.605818 GCGTTGAAATGCGACCTGTATA 59.394 45.455 0.00 0.00 0.00 1.47
3895 4573 1.396996 GCGTTGAAATGCGACCTGTAT 59.603 47.619 0.00 0.00 0.00 2.29
3896 4574 0.793861 GCGTTGAAATGCGACCTGTA 59.206 50.000 0.00 0.00 0.00 2.74
3897 4575 1.163420 TGCGTTGAAATGCGACCTGT 61.163 50.000 2.99 0.00 43.79 4.00
3898 4576 0.725784 GTGCGTTGAAATGCGACCTG 60.726 55.000 2.99 0.00 43.79 4.00
3899 4577 1.163420 TGTGCGTTGAAATGCGACCT 61.163 50.000 2.99 0.00 43.79 3.85
3900 4578 0.109781 ATGTGCGTTGAAATGCGACC 60.110 50.000 2.99 0.00 43.79 4.79
3901 4579 1.250476 GATGTGCGTTGAAATGCGAC 58.750 50.000 2.99 3.63 43.79 5.19
3902 4580 0.167908 GGATGTGCGTTGAAATGCGA 59.832 50.000 2.99 0.00 43.79 5.10
3903 4581 0.798009 GGGATGTGCGTTGAAATGCG 60.798 55.000 2.99 0.00 43.79 4.73
3904 4582 0.798009 CGGGATGTGCGTTGAAATGC 60.798 55.000 0.14 0.14 41.27 3.56
3905 4583 0.801872 TCGGGATGTGCGTTGAAATG 59.198 50.000 0.00 0.00 0.00 2.32
3906 4584 1.086696 CTCGGGATGTGCGTTGAAAT 58.913 50.000 0.00 0.00 0.00 2.17
3907 4585 0.034198 TCTCGGGATGTGCGTTGAAA 59.966 50.000 0.00 0.00 0.00 2.69
3908 4586 0.034198 TTCTCGGGATGTGCGTTGAA 59.966 50.000 0.00 0.00 0.00 2.69
3909 4587 0.034198 TTTCTCGGGATGTGCGTTGA 59.966 50.000 0.00 0.00 0.00 3.18
3910 4588 0.871722 TTTTCTCGGGATGTGCGTTG 59.128 50.000 0.00 0.00 0.00 4.10
3911 4589 1.600023 TTTTTCTCGGGATGTGCGTT 58.400 45.000 0.00 0.00 0.00 4.84
3912 4590 3.315765 TTTTTCTCGGGATGTGCGT 57.684 47.368 0.00 0.00 0.00 5.24
3934 4612 9.540538 TGAGGGAAAAGAAAATTTATACCATGA 57.459 29.630 0.00 0.00 0.00 3.07
3935 4613 9.586435 GTGAGGGAAAAGAAAATTTATACCATG 57.414 33.333 0.00 0.00 0.00 3.66
3936 4614 9.320295 TGTGAGGGAAAAGAAAATTTATACCAT 57.680 29.630 0.00 0.00 0.00 3.55
3937 4615 8.713708 TGTGAGGGAAAAGAAAATTTATACCA 57.286 30.769 0.00 0.00 0.00 3.25
3938 4616 9.990360 TTTGTGAGGGAAAAGAAAATTTATACC 57.010 29.630 0.00 0.00 0.00 2.73
3943 4621 9.631257 ATTGATTTGTGAGGGAAAAGAAAATTT 57.369 25.926 0.00 0.00 0.00 1.82
3946 4624 9.541143 GTTATTGATTTGTGAGGGAAAAGAAAA 57.459 29.630 0.00 0.00 0.00 2.29
3947 4625 8.923270 AGTTATTGATTTGTGAGGGAAAAGAAA 58.077 29.630 0.00 0.00 0.00 2.52
3948 4626 8.477419 AGTTATTGATTTGTGAGGGAAAAGAA 57.523 30.769 0.00 0.00 0.00 2.52
3949 4627 8.359642 CAAGTTATTGATTTGTGAGGGAAAAGA 58.640 33.333 0.00 0.00 38.83 2.52
3950 4628 8.359642 TCAAGTTATTGATTTGTGAGGGAAAAG 58.640 33.333 0.00 0.00 40.54 2.27
3951 4629 8.141268 GTCAAGTTATTGATTTGTGAGGGAAAA 58.859 33.333 0.00 0.00 46.75 2.29
3952 4630 7.505585 AGTCAAGTTATTGATTTGTGAGGGAAA 59.494 33.333 0.00 0.00 46.75 3.13
3953 4631 7.004086 AGTCAAGTTATTGATTTGTGAGGGAA 58.996 34.615 0.00 0.00 46.75 3.97
3954 4632 6.542821 AGTCAAGTTATTGATTTGTGAGGGA 58.457 36.000 0.00 0.00 46.75 4.20
3955 4633 6.824305 AGTCAAGTTATTGATTTGTGAGGG 57.176 37.500 0.00 0.00 46.75 4.30
3993 4671 3.621268 TGTGTCGGCAATTCTATACTTGC 59.379 43.478 0.00 0.00 45.46 4.01
3994 4672 5.991328 ATGTGTCGGCAATTCTATACTTG 57.009 39.130 0.00 0.00 0.00 3.16
3995 4673 5.296780 CCAATGTGTCGGCAATTCTATACTT 59.703 40.000 0.00 0.00 0.00 2.24
3996 4674 4.816385 CCAATGTGTCGGCAATTCTATACT 59.184 41.667 0.00 0.00 0.00 2.12
3997 4675 4.574828 ACCAATGTGTCGGCAATTCTATAC 59.425 41.667 0.00 0.00 0.00 1.47
3998 4676 4.776349 ACCAATGTGTCGGCAATTCTATA 58.224 39.130 0.00 0.00 0.00 1.31
3999 4677 3.620488 ACCAATGTGTCGGCAATTCTAT 58.380 40.909 0.00 0.00 0.00 1.98
4000 4678 3.066291 ACCAATGTGTCGGCAATTCTA 57.934 42.857 0.00 0.00 0.00 2.10
4001 4679 1.909700 ACCAATGTGTCGGCAATTCT 58.090 45.000 0.00 0.00 0.00 2.40
4002 4680 3.840890 TTACCAATGTGTCGGCAATTC 57.159 42.857 0.00 0.00 0.00 2.17
4003 4681 3.056891 CCTTTACCAATGTGTCGGCAATT 60.057 43.478 0.00 0.00 0.00 2.32
4004 4682 2.491693 CCTTTACCAATGTGTCGGCAAT 59.508 45.455 0.00 0.00 0.00 3.56
4005 4683 1.883275 CCTTTACCAATGTGTCGGCAA 59.117 47.619 0.00 0.00 0.00 4.52
4006 4684 1.529226 CCTTTACCAATGTGTCGGCA 58.471 50.000 0.00 0.00 0.00 5.69
4007 4685 0.170339 GCCTTTACCAATGTGTCGGC 59.830 55.000 0.00 0.00 0.00 5.54
4008 4686 1.529226 TGCCTTTACCAATGTGTCGG 58.471 50.000 0.00 0.00 0.00 4.79
4009 4687 3.848272 AATGCCTTTACCAATGTGTCG 57.152 42.857 0.00 0.00 0.00 4.35
4010 4688 9.083080 GTATTAAAATGCCTTTACCAATGTGTC 57.917 33.333 0.00 0.00 0.00 3.67
4011 4689 8.589338 TGTATTAAAATGCCTTTACCAATGTGT 58.411 29.630 0.00 0.00 0.00 3.72
4012 4690 8.994429 TGTATTAAAATGCCTTTACCAATGTG 57.006 30.769 0.00 0.00 0.00 3.21
4060 4738 9.092338 TGTGTTAGGAACCAGTACTTTTCTATA 57.908 33.333 11.92 5.30 0.00 1.31
4061 4739 7.970102 TGTGTTAGGAACCAGTACTTTTCTAT 58.030 34.615 11.92 6.01 0.00 1.98
4062 4740 7.364149 TGTGTTAGGAACCAGTACTTTTCTA 57.636 36.000 11.92 3.35 0.00 2.10
4063 4741 6.243216 TGTGTTAGGAACCAGTACTTTTCT 57.757 37.500 11.92 4.19 0.00 2.52
4064 4742 6.930667 TTGTGTTAGGAACCAGTACTTTTC 57.069 37.500 0.00 0.00 0.00 2.29
4065 4743 6.888088 AGTTTGTGTTAGGAACCAGTACTTTT 59.112 34.615 0.00 0.00 0.00 2.27
4066 4744 6.420638 AGTTTGTGTTAGGAACCAGTACTTT 58.579 36.000 0.00 0.00 0.00 2.66
4067 4745 5.997843 AGTTTGTGTTAGGAACCAGTACTT 58.002 37.500 0.00 0.00 0.00 2.24
4068 4746 5.625568 AGTTTGTGTTAGGAACCAGTACT 57.374 39.130 0.00 0.00 0.00 2.73
4069 4747 5.505159 GCAAGTTTGTGTTAGGAACCAGTAC 60.505 44.000 0.00 0.00 0.00 2.73
4070 4748 4.577283 GCAAGTTTGTGTTAGGAACCAGTA 59.423 41.667 0.00 0.00 0.00 2.74
4071 4749 3.380320 GCAAGTTTGTGTTAGGAACCAGT 59.620 43.478 0.00 0.00 0.00 4.00
4072 4750 3.380004 TGCAAGTTTGTGTTAGGAACCAG 59.620 43.478 0.00 0.00 0.00 4.00
4073 4751 3.357203 TGCAAGTTTGTGTTAGGAACCA 58.643 40.909 0.00 0.00 0.00 3.67
4074 4752 4.584327 ATGCAAGTTTGTGTTAGGAACC 57.416 40.909 0.00 0.00 0.00 3.62
4075 4753 7.865385 TGATAAATGCAAGTTTGTGTTAGGAAC 59.135 33.333 0.00 0.00 0.00 3.62
4076 4754 7.865385 GTGATAAATGCAAGTTTGTGTTAGGAA 59.135 33.333 0.00 0.00 0.00 3.36
4077 4755 7.230510 AGTGATAAATGCAAGTTTGTGTTAGGA 59.769 33.333 0.00 0.00 0.00 2.94
4078 4756 7.370383 AGTGATAAATGCAAGTTTGTGTTAGG 58.630 34.615 0.00 0.00 0.00 2.69
4079 4757 9.891828 TTAGTGATAAATGCAAGTTTGTGTTAG 57.108 29.630 0.00 0.00 0.00 2.34
4080 4758 9.891828 CTTAGTGATAAATGCAAGTTTGTGTTA 57.108 29.630 0.00 0.00 0.00 2.41
4081 4759 8.413229 ACTTAGTGATAAATGCAAGTTTGTGTT 58.587 29.630 0.00 0.00 0.00 3.32
4082 4760 7.940850 ACTTAGTGATAAATGCAAGTTTGTGT 58.059 30.769 0.00 0.00 0.00 3.72
4083 4761 8.801715 AACTTAGTGATAAATGCAAGTTTGTG 57.198 30.769 0.00 0.00 33.63 3.33
4084 4762 9.816354 AAAACTTAGTGATAAATGCAAGTTTGT 57.184 25.926 10.09 0.00 42.35 2.83
4091 4769 9.624697 GTCAATGAAAACTTAGTGATAAATGCA 57.375 29.630 0.00 0.00 0.00 3.96
4092 4770 9.846248 AGTCAATGAAAACTTAGTGATAAATGC 57.154 29.630 0.00 0.00 0.00 3.56
4096 4774 9.917129 TCGTAGTCAATGAAAACTTAGTGATAA 57.083 29.630 0.00 0.00 0.00 1.75
4097 4775 9.917129 TTCGTAGTCAATGAAAACTTAGTGATA 57.083 29.630 0.00 0.00 29.93 2.15
4098 4776 8.827177 TTCGTAGTCAATGAAAACTTAGTGAT 57.173 30.769 0.00 0.00 29.93 3.06
4099 4777 8.708742 CATTCGTAGTCAATGAAAACTTAGTGA 58.291 33.333 0.00 0.00 36.69 3.41
4100 4778 8.708742 TCATTCGTAGTCAATGAAAACTTAGTG 58.291 33.333 0.00 0.00 37.33 2.74
4101 4779 8.827177 TCATTCGTAGTCAATGAAAACTTAGT 57.173 30.769 0.00 0.00 37.33 2.24
4105 4783 9.436957 AGTTATCATTCGTAGTCAATGAAAACT 57.563 29.630 1.17 0.00 42.23 2.66
4108 4786 8.592155 CGAAGTTATCATTCGTAGTCAATGAAA 58.408 33.333 1.17 0.00 42.23 2.69
4109 4787 8.115491 CGAAGTTATCATTCGTAGTCAATGAA 57.885 34.615 1.17 0.00 42.23 2.57
4110 4788 7.679659 CGAAGTTATCATTCGTAGTCAATGA 57.320 36.000 0.00 0.00 43.42 2.57
4131 4809 9.850628 CCGATATATCATCTTAAGGTTTACGAA 57.149 33.333 13.11 0.00 0.00 3.85
4132 4810 9.234827 TCCGATATATCATCTTAAGGTTTACGA 57.765 33.333 13.11 0.00 0.00 3.43
4139 4817 9.404348 CGATTGATCCGATATATCATCTTAAGG 57.596 37.037 13.11 4.20 33.52 2.69
4140 4818 8.910666 GCGATTGATCCGATATATCATCTTAAG 58.089 37.037 13.11 0.00 33.52 1.85
4141 4819 8.633561 AGCGATTGATCCGATATATCATCTTAA 58.366 33.333 13.11 3.01 33.52 1.85
4142 4820 8.171164 AGCGATTGATCCGATATATCATCTTA 57.829 34.615 13.11 3.25 33.52 2.10
4143 4821 7.048629 AGCGATTGATCCGATATATCATCTT 57.951 36.000 13.11 2.32 33.52 2.40
4144 4822 6.567511 CGAGCGATTGATCCGATATATCATCT 60.568 42.308 13.11 0.00 33.52 2.90
4145 4823 5.567154 CGAGCGATTGATCCGATATATCATC 59.433 44.000 13.11 9.28 33.52 2.92
4146 4824 5.456265 CGAGCGATTGATCCGATATATCAT 58.544 41.667 13.11 0.00 33.52 2.45
4147 4825 4.261197 CCGAGCGATTGATCCGATATATCA 60.261 45.833 13.11 0.00 0.00 2.15
4148 4826 4.023963 TCCGAGCGATTGATCCGATATATC 60.024 45.833 2.34 2.34 0.00 1.63
4149 4827 3.883489 TCCGAGCGATTGATCCGATATAT 59.117 43.478 0.00 0.00 0.00 0.86
4150 4828 3.275999 TCCGAGCGATTGATCCGATATA 58.724 45.455 0.00 0.00 0.00 0.86
4151 4829 2.092323 TCCGAGCGATTGATCCGATAT 58.908 47.619 0.00 0.00 0.00 1.63
4152 4830 1.468914 CTCCGAGCGATTGATCCGATA 59.531 52.381 0.00 0.00 0.00 2.92
4153 4831 0.242286 CTCCGAGCGATTGATCCGAT 59.758 55.000 0.00 0.00 0.00 4.18
4154 4832 1.654774 CTCCGAGCGATTGATCCGA 59.345 57.895 0.00 0.00 0.00 4.55
4155 4833 1.372251 CCTCCGAGCGATTGATCCG 60.372 63.158 0.00 0.00 0.00 4.18
4156 4834 0.959553 TACCTCCGAGCGATTGATCC 59.040 55.000 0.00 0.00 0.00 3.36
4157 4835 1.609555 AGTACCTCCGAGCGATTGATC 59.390 52.381 0.00 0.00 0.00 2.92
4158 4836 1.693627 AGTACCTCCGAGCGATTGAT 58.306 50.000 0.00 0.00 0.00 2.57
4159 4837 2.336945 TAGTACCTCCGAGCGATTGA 57.663 50.000 0.00 0.00 0.00 2.57
4160 4838 2.293677 ACATAGTACCTCCGAGCGATTG 59.706 50.000 0.00 0.00 0.00 2.67
4161 4839 2.584236 ACATAGTACCTCCGAGCGATT 58.416 47.619 0.00 0.00 0.00 3.34
4162 4840 2.273538 ACATAGTACCTCCGAGCGAT 57.726 50.000 0.00 0.00 0.00 4.58
4163 4841 2.048444 AACATAGTACCTCCGAGCGA 57.952 50.000 0.00 0.00 0.00 4.93
4164 4842 2.865343 AAACATAGTACCTCCGAGCG 57.135 50.000 0.00 0.00 0.00 5.03
4165 4843 5.511234 TCTAAAACATAGTACCTCCGAGC 57.489 43.478 0.00 0.00 0.00 5.03
4166 4844 8.767478 TTTTTCTAAAACATAGTACCTCCGAG 57.233 34.615 0.00 0.00 0.00 4.63
4188 4866 6.389091 TCATCGCATATGCTTGTTTCTTTTT 58.611 32.000 24.56 0.00 39.32 1.94
4189 4867 5.953183 TCATCGCATATGCTTGTTTCTTTT 58.047 33.333 24.56 0.00 39.32 2.27
4190 4868 5.565592 TCATCGCATATGCTTGTTTCTTT 57.434 34.783 24.56 0.00 39.32 2.52
4191 4869 5.565592 TTCATCGCATATGCTTGTTTCTT 57.434 34.783 24.56 0.00 39.32 2.52
4192 4870 5.565592 TTTCATCGCATATGCTTGTTTCT 57.434 34.783 24.56 0.00 39.32 2.52
4193 4871 6.630676 TTTTTCATCGCATATGCTTGTTTC 57.369 33.333 24.56 0.00 39.32 2.78
4215 4893 6.318396 GCATTAAATGGCCACCATACATTTTT 59.682 34.615 8.16 3.68 44.40 1.94
4216 4894 5.821995 GCATTAAATGGCCACCATACATTTT 59.178 36.000 8.16 4.53 44.40 1.82
4217 4895 5.104610 TGCATTAAATGGCCACCATACATTT 60.105 36.000 8.16 5.39 44.40 2.32
4218 4896 4.408270 TGCATTAAATGGCCACCATACATT 59.592 37.500 8.16 0.00 44.40 2.71
4219 4897 3.966006 TGCATTAAATGGCCACCATACAT 59.034 39.130 8.16 0.00 44.40 2.29
4220 4898 3.369175 TGCATTAAATGGCCACCATACA 58.631 40.909 8.16 0.00 44.40 2.29
4221 4899 3.243839 CCTGCATTAAATGGCCACCATAC 60.244 47.826 8.16 0.00 44.40 2.39
4222 4900 2.964464 CCTGCATTAAATGGCCACCATA 59.036 45.455 8.16 0.00 44.40 2.74
4224 4902 1.193323 CCTGCATTAAATGGCCACCA 58.807 50.000 8.16 0.00 38.19 4.17
4225 4903 0.465287 CCCTGCATTAAATGGCCACC 59.535 55.000 8.16 0.00 0.00 4.61
4226 4904 1.484038 TCCCTGCATTAAATGGCCAC 58.516 50.000 8.16 0.00 0.00 5.01
4227 4905 2.109774 CTTCCCTGCATTAAATGGCCA 58.890 47.619 8.56 8.56 0.00 5.36
4228 4906 1.413812 CCTTCCCTGCATTAAATGGCC 59.586 52.381 0.00 0.00 0.00 5.36
4229 4907 2.387757 TCCTTCCCTGCATTAAATGGC 58.612 47.619 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.