Multiple sequence alignment - TraesCS3B01G162800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G162800 chr3B 100.000 3966 0 0 1 3966 160517905 160513940 0.000000e+00 7324.0
1 TraesCS3B01G162800 chr3B 89.804 716 69 3 3253 3966 160475390 160474677 0.000000e+00 915.0
2 TraesCS3B01G162800 chr3A 91.810 1746 89 24 1394 3096 121387556 121389290 0.000000e+00 2383.0
3 TraesCS3B01G162800 chr3A 77.953 762 92 44 350 1070 121386781 121387507 1.330000e-109 407.0
4 TraesCS3B01G162800 chr3A 81.395 301 33 10 1104 1396 611959929 611959644 1.430000e-54 224.0
5 TraesCS3B01G162800 chr3D 95.581 1222 40 4 1766 2973 109076080 109074859 0.000000e+00 1945.0
6 TraesCS3B01G162800 chr3D 90.510 843 79 1 3124 3966 109028057 109027216 0.000000e+00 1112.0
7 TraesCS3B01G162800 chr3D 91.074 661 57 2 3306 3966 109071664 109071006 0.000000e+00 893.0
8 TraesCS3B01G162800 chr3D 97.313 335 9 0 2986 3320 109074739 109074405 1.600000e-158 569.0
9 TraesCS3B01G162800 chr3D 89.697 330 25 6 775 1103 109078068 109077747 2.850000e-111 412.0
10 TraesCS3B01G162800 chr3D 87.613 331 20 11 775 1103 109077030 109076719 8.100000e-97 364.0
11 TraesCS3B01G162800 chr3D 89.474 209 14 6 1392 1596 109077750 109077546 1.410000e-64 257.0
12 TraesCS3B01G162800 chr3D 88.517 209 17 5 1392 1596 109076722 109076517 3.060000e-61 246.0
13 TraesCS3B01G162800 chr6B 89.404 302 22 6 1104 1396 525006104 525006404 4.840000e-99 372.0
14 TraesCS3B01G162800 chr6B 86.184 304 24 8 1105 1399 75642353 75642059 2.980000e-81 313.0
15 TraesCS3B01G162800 chr1D 88.667 300 21 6 1108 1396 386376059 386375762 1.750000e-93 353.0
16 TraesCS3B01G162800 chr7B 87.755 294 27 4 1110 1396 41336193 41335902 6.350000e-88 335.0
17 TraesCS3B01G162800 chr2D 87.055 309 20 8 1105 1396 35245547 35245852 8.210000e-87 331.0
18 TraesCS3B01G162800 chr2D 88.235 204 10 4 1207 1398 22782642 22782843 8.570000e-57 231.0
19 TraesCS3B01G162800 chr5D 86.842 304 24 6 1105 1396 462517523 462517822 3.820000e-85 326.0
20 TraesCS3B01G162800 chr5D 98.148 54 1 0 282 335 383629874 383629821 1.170000e-15 95.3
21 TraesCS3B01G162800 chr6D 88.298 282 14 8 1132 1396 411556619 411556340 1.780000e-83 320.0
22 TraesCS3B01G162800 chr2B 88.722 266 19 5 1141 1396 205865126 205864862 8.270000e-82 315.0
23 TraesCS3B01G162800 chr5B 85.417 288 17 7 1108 1378 423626214 423625935 3.900000e-70 276.0
24 TraesCS3B01G162800 chr4A 82.445 319 25 11 1108 1396 143448664 143448347 2.370000e-62 250.0
25 TraesCS3B01G162800 chr6A 89.500 200 16 3 1104 1298 404243367 404243168 8.510000e-62 248.0
26 TraesCS3B01G162800 chr7D 92.793 111 6 2 1293 1403 459741955 459741847 4.100000e-35 159.0
27 TraesCS3B01G162800 chrUn 96.875 32 1 0 753 784 154598508 154598539 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G162800 chr3B 160513940 160517905 3965 True 7324.000000 7324 100.000000 1 3966 1 chr3B.!!$R2 3965
1 TraesCS3B01G162800 chr3B 160474677 160475390 713 True 915.000000 915 89.804000 3253 3966 1 chr3B.!!$R1 713
2 TraesCS3B01G162800 chr3A 121386781 121389290 2509 False 1395.000000 2383 84.881500 350 3096 2 chr3A.!!$F1 2746
3 TraesCS3B01G162800 chr3D 109027216 109028057 841 True 1112.000000 1112 90.510000 3124 3966 1 chr3D.!!$R1 842
4 TraesCS3B01G162800 chr3D 109071006 109078068 7062 True 669.428571 1945 91.324143 775 3966 7 chr3D.!!$R2 3191

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 168 0.034337 TTGTAGTTGGTCTCCACGCC 59.966 55.0 0.00 0.0 30.78 5.68 F
544 546 0.040067 CCTCAAAGCCAAAGCGACAC 60.040 55.0 0.00 0.0 46.67 3.67 F
1772 3202 0.033208 TGTGAAGATGGGGCCATTCC 60.033 55.0 4.39 0.0 36.70 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1754 3184 0.033208 TGGAATGGCCCCATCTTCAC 60.033 55.0 0.0 0.0 35.31 3.18 R
1818 3248 1.036707 CTCCCTCTTGACCTCGATCC 58.963 60.0 0.0 0.0 0.00 3.36 R
3493 7800 0.179187 CAAACCACAAACGTCGCACA 60.179 50.0 0.0 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 9.122779 TCATTGTCTGTCATTGATAAATATGCA 57.877 29.630 0.00 0.00 33.35 3.96
43 44 9.394477 CATTGTCTGTCATTGATAAATATGCAG 57.606 33.333 0.00 0.00 32.31 4.41
44 45 7.500720 TGTCTGTCATTGATAAATATGCAGG 57.499 36.000 0.00 0.00 32.13 4.85
45 46 7.281841 TGTCTGTCATTGATAAATATGCAGGA 58.718 34.615 0.00 0.00 32.13 3.86
46 47 7.227314 TGTCTGTCATTGATAAATATGCAGGAC 59.773 37.037 0.00 0.00 32.13 3.85
47 48 7.227314 GTCTGTCATTGATAAATATGCAGGACA 59.773 37.037 0.00 0.00 32.13 4.02
48 49 7.774625 TCTGTCATTGATAAATATGCAGGACAA 59.225 33.333 0.00 0.00 31.78 3.18
49 50 8.291191 TGTCATTGATAAATATGCAGGACAAA 57.709 30.769 0.00 0.00 30.27 2.83
50 51 8.747471 TGTCATTGATAAATATGCAGGACAAAA 58.253 29.630 0.00 0.00 30.27 2.44
51 52 9.585099 GTCATTGATAAATATGCAGGACAAAAA 57.415 29.630 0.00 0.00 0.00 1.94
52 53 9.806203 TCATTGATAAATATGCAGGACAAAAAG 57.194 29.630 0.00 0.00 0.00 2.27
53 54 9.806203 CATTGATAAATATGCAGGACAAAAAGA 57.194 29.630 0.00 0.00 0.00 2.52
56 57 9.638239 TGATAAATATGCAGGACAAAAAGAAAC 57.362 29.630 0.00 0.00 0.00 2.78
57 58 8.687824 ATAAATATGCAGGACAAAAAGAAACG 57.312 30.769 0.00 0.00 0.00 3.60
58 59 2.202295 TGCAGGACAAAAAGAAACGC 57.798 45.000 0.00 0.00 0.00 4.84
59 60 1.474478 TGCAGGACAAAAAGAAACGCA 59.526 42.857 0.00 0.00 0.00 5.24
60 61 2.094494 TGCAGGACAAAAAGAAACGCAA 60.094 40.909 0.00 0.00 0.00 4.85
61 62 3.123050 GCAGGACAAAAAGAAACGCAAT 58.877 40.909 0.00 0.00 0.00 3.56
62 63 4.202060 TGCAGGACAAAAAGAAACGCAATA 60.202 37.500 0.00 0.00 0.00 1.90
63 64 4.148174 GCAGGACAAAAAGAAACGCAATAC 59.852 41.667 0.00 0.00 0.00 1.89
83 84 8.943925 GCAATACGAACATAATCATTTACACAC 58.056 33.333 0.00 0.00 0.00 3.82
92 93 9.594478 ACATAATCATTTACACACTATTCACGA 57.406 29.630 0.00 0.00 0.00 4.35
95 96 8.771920 AATCATTTACACACTATTCACGAGAA 57.228 30.769 0.00 0.00 38.31 2.87
96 97 8.771920 ATCATTTACACACTATTCACGAGAAA 57.228 30.769 0.00 0.00 37.29 2.52
97 98 8.771920 TCATTTACACACTATTCACGAGAAAT 57.228 30.769 0.00 0.00 37.29 2.17
98 99 9.863845 TCATTTACACACTATTCACGAGAAATA 57.136 29.630 0.00 0.00 37.29 1.40
101 102 8.867112 TTACACACTATTCACGAGAAATATCC 57.133 34.615 0.00 0.00 37.29 2.59
102 103 7.113658 ACACACTATTCACGAGAAATATCCT 57.886 36.000 0.00 0.00 37.29 3.24
103 104 7.556844 ACACACTATTCACGAGAAATATCCTT 58.443 34.615 0.00 0.00 37.29 3.36
104 105 7.707035 ACACACTATTCACGAGAAATATCCTTC 59.293 37.037 0.00 0.00 37.29 3.46
105 106 7.706607 CACACTATTCACGAGAAATATCCTTCA 59.293 37.037 0.00 0.00 37.29 3.02
106 107 8.258007 ACACTATTCACGAGAAATATCCTTCAA 58.742 33.333 0.00 0.00 37.29 2.69
107 108 9.098355 CACTATTCACGAGAAATATCCTTCAAA 57.902 33.333 0.00 0.00 37.29 2.69
108 109 9.838339 ACTATTCACGAGAAATATCCTTCAAAT 57.162 29.630 0.00 0.00 37.29 2.32
111 112 7.921786 TCACGAGAAATATCCTTCAAATTGT 57.078 32.000 0.00 0.00 0.00 2.71
112 113 8.335532 TCACGAGAAATATCCTTCAAATTGTT 57.664 30.769 0.00 0.00 0.00 2.83
113 114 8.792633 TCACGAGAAATATCCTTCAAATTGTTT 58.207 29.630 0.00 0.00 0.00 2.83
116 117 9.503427 CGAGAAATATCCTTCAAATTGTTTACC 57.497 33.333 0.00 0.00 0.00 2.85
123 124 7.775053 TCCTTCAAATTGTTTACCTATTGCT 57.225 32.000 0.00 0.00 0.00 3.91
124 125 8.189119 TCCTTCAAATTGTTTACCTATTGCTT 57.811 30.769 0.00 0.00 0.00 3.91
125 126 8.646900 TCCTTCAAATTGTTTACCTATTGCTTT 58.353 29.630 0.00 0.00 0.00 3.51
126 127 8.711457 CCTTCAAATTGTTTACCTATTGCTTTG 58.289 33.333 0.00 0.00 0.00 2.77
127 128 9.260002 CTTCAAATTGTTTACCTATTGCTTTGT 57.740 29.630 0.00 0.00 0.00 2.83
141 142 9.382244 CCTATTGCTTTGTATTAGTTAATTCGC 57.618 33.333 0.00 0.00 0.00 4.70
144 145 9.855021 ATTGCTTTGTATTAGTTAATTCGCTTT 57.145 25.926 0.00 0.00 0.00 3.51
145 146 9.685828 TTGCTTTGTATTAGTTAATTCGCTTTT 57.314 25.926 0.00 0.00 0.00 2.27
146 147 9.685828 TGCTTTGTATTAGTTAATTCGCTTTTT 57.314 25.926 0.00 0.00 0.00 1.94
166 167 1.873698 TTTGTAGTTGGTCTCCACGC 58.126 50.000 0.00 0.00 30.78 5.34
167 168 0.034337 TTGTAGTTGGTCTCCACGCC 59.966 55.000 0.00 0.00 30.78 5.68
168 169 1.445582 GTAGTTGGTCTCCACGCCG 60.446 63.158 0.00 0.00 30.78 6.46
169 170 1.604308 TAGTTGGTCTCCACGCCGA 60.604 57.895 0.00 0.00 30.78 5.54
170 171 0.968901 TAGTTGGTCTCCACGCCGAT 60.969 55.000 0.00 0.00 30.78 4.18
171 172 2.100631 GTTGGTCTCCACGCCGATG 61.101 63.158 0.00 0.00 30.78 3.84
172 173 2.279810 TTGGTCTCCACGCCGATGA 61.280 57.895 0.00 0.00 30.78 2.92
173 174 2.202756 GGTCTCCACGCCGATGAC 60.203 66.667 0.00 0.00 0.00 3.06
174 175 2.711922 GGTCTCCACGCCGATGACT 61.712 63.158 0.00 0.00 0.00 3.41
175 176 1.517257 GTCTCCACGCCGATGACTG 60.517 63.158 0.00 0.00 0.00 3.51
176 177 2.887568 CTCCACGCCGATGACTGC 60.888 66.667 0.00 0.00 0.00 4.40
177 178 3.647649 CTCCACGCCGATGACTGCA 62.648 63.158 0.00 0.00 0.00 4.41
178 179 2.512286 CCACGCCGATGACTGCAT 60.512 61.111 0.00 0.00 37.47 3.96
179 180 2.108514 CCACGCCGATGACTGCATT 61.109 57.895 0.00 0.00 34.11 3.56
180 181 1.647545 CCACGCCGATGACTGCATTT 61.648 55.000 0.00 0.00 34.11 2.32
181 182 0.521867 CACGCCGATGACTGCATTTG 60.522 55.000 0.00 0.00 34.11 2.32
182 183 1.063006 CGCCGATGACTGCATTTGG 59.937 57.895 0.00 0.00 34.11 3.28
183 184 1.226773 GCCGATGACTGCATTTGGC 60.227 57.895 0.00 0.00 44.00 4.52
184 185 1.660560 GCCGATGACTGCATTTGGCT 61.661 55.000 12.80 0.00 45.46 4.75
185 186 0.099968 CCGATGACTGCATTTGGCTG 59.900 55.000 0.00 0.00 45.15 4.85
192 193 2.754946 CTGCATTTGGCTGTTTGGAT 57.245 45.000 0.00 0.00 45.15 3.41
193 194 3.872511 CTGCATTTGGCTGTTTGGATA 57.127 42.857 0.00 0.00 45.15 2.59
194 195 3.514645 CTGCATTTGGCTGTTTGGATAC 58.485 45.455 0.00 0.00 45.15 2.24
195 196 3.164268 TGCATTTGGCTGTTTGGATACT 58.836 40.909 0.00 0.00 45.15 2.12
196 197 3.577848 TGCATTTGGCTGTTTGGATACTT 59.422 39.130 0.00 0.00 45.15 2.24
197 198 4.176271 GCATTTGGCTGTTTGGATACTTC 58.824 43.478 0.00 0.00 40.25 3.01
198 199 4.321899 GCATTTGGCTGTTTGGATACTTCA 60.322 41.667 0.00 0.00 40.25 3.02
199 200 4.846779 TTTGGCTGTTTGGATACTTCAC 57.153 40.909 0.00 0.00 37.61 3.18
200 201 3.788227 TGGCTGTTTGGATACTTCACT 57.212 42.857 0.00 0.00 37.61 3.41
201 202 4.098914 TGGCTGTTTGGATACTTCACTT 57.901 40.909 0.00 0.00 37.61 3.16
202 203 5.235850 TGGCTGTTTGGATACTTCACTTA 57.764 39.130 0.00 0.00 37.61 2.24
203 204 5.626142 TGGCTGTTTGGATACTTCACTTAA 58.374 37.500 0.00 0.00 37.61 1.85
204 205 6.245408 TGGCTGTTTGGATACTTCACTTAAT 58.755 36.000 0.00 0.00 37.61 1.40
205 206 6.719370 TGGCTGTTTGGATACTTCACTTAATT 59.281 34.615 0.00 0.00 37.61 1.40
206 207 7.232534 TGGCTGTTTGGATACTTCACTTAATTT 59.767 33.333 0.00 0.00 37.61 1.82
207 208 7.755373 GGCTGTTTGGATACTTCACTTAATTTC 59.245 37.037 0.00 0.00 37.61 2.17
208 209 7.755373 GCTGTTTGGATACTTCACTTAATTTCC 59.245 37.037 0.00 0.00 37.61 3.13
209 210 8.934023 TGTTTGGATACTTCACTTAATTTCCT 57.066 30.769 0.00 0.00 37.61 3.36
255 256 9.724839 TTTCAAATAGTTCACTTTTAACTTCCG 57.275 29.630 0.00 0.00 38.18 4.30
256 257 7.357303 TCAAATAGTTCACTTTTAACTTCCGC 58.643 34.615 0.00 0.00 38.18 5.54
257 258 3.872560 AGTTCACTTTTAACTTCCGCG 57.127 42.857 0.00 0.00 33.39 6.46
258 259 3.460103 AGTTCACTTTTAACTTCCGCGA 58.540 40.909 8.23 0.00 33.39 5.87
259 260 4.062991 AGTTCACTTTTAACTTCCGCGAT 58.937 39.130 8.23 0.00 33.39 4.58
260 261 4.084013 AGTTCACTTTTAACTTCCGCGATG 60.084 41.667 8.23 0.00 33.39 3.84
261 262 3.395639 TCACTTTTAACTTCCGCGATGT 58.604 40.909 8.23 0.00 0.00 3.06
262 263 4.558178 TCACTTTTAACTTCCGCGATGTA 58.442 39.130 8.23 0.00 0.00 2.29
263 264 4.624024 TCACTTTTAACTTCCGCGATGTAG 59.376 41.667 8.23 0.99 0.00 2.74
264 265 4.387862 CACTTTTAACTTCCGCGATGTAGT 59.612 41.667 8.23 1.71 0.00 2.73
265 266 4.992951 ACTTTTAACTTCCGCGATGTAGTT 59.007 37.500 8.23 13.35 35.25 2.24
266 267 4.914312 TTTAACTTCCGCGATGTAGTTG 57.086 40.909 8.23 0.00 33.28 3.16
267 268 1.722011 AACTTCCGCGATGTAGTTGG 58.278 50.000 8.23 0.00 30.17 3.77
268 269 0.606604 ACTTCCGCGATGTAGTTGGT 59.393 50.000 8.23 0.00 0.00 3.67
269 270 1.278238 CTTCCGCGATGTAGTTGGTC 58.722 55.000 8.23 0.00 0.00 4.02
270 271 0.892755 TTCCGCGATGTAGTTGGTCT 59.107 50.000 8.23 0.00 0.00 3.85
271 272 0.454600 TCCGCGATGTAGTTGGTCTC 59.545 55.000 8.23 0.00 0.00 3.36
272 273 0.456221 CCGCGATGTAGTTGGTCTCT 59.544 55.000 8.23 0.00 0.00 3.10
273 274 1.550065 CGCGATGTAGTTGGTCTCTG 58.450 55.000 0.00 0.00 0.00 3.35
274 275 1.281899 GCGATGTAGTTGGTCTCTGC 58.718 55.000 0.00 0.00 0.00 4.26
275 276 1.550065 CGATGTAGTTGGTCTCTGCG 58.450 55.000 0.00 0.00 0.00 5.18
276 277 1.281899 GATGTAGTTGGTCTCTGCGC 58.718 55.000 0.00 0.00 0.00 6.09
277 278 0.108138 ATGTAGTTGGTCTCTGCGCC 60.108 55.000 4.18 0.00 0.00 6.53
278 279 1.292223 GTAGTTGGTCTCTGCGCCA 59.708 57.895 4.18 0.00 0.00 5.69
279 280 0.320421 GTAGTTGGTCTCTGCGCCAA 60.320 55.000 4.18 0.00 41.90 4.52
280 281 0.613260 TAGTTGGTCTCTGCGCCAAT 59.387 50.000 4.18 0.00 45.22 3.16
281 282 0.250901 AGTTGGTCTCTGCGCCAATT 60.251 50.000 4.18 0.00 45.22 2.32
282 283 1.003118 AGTTGGTCTCTGCGCCAATTA 59.997 47.619 4.18 0.00 45.22 1.40
283 284 1.810151 GTTGGTCTCTGCGCCAATTAA 59.190 47.619 4.18 0.00 45.22 1.40
284 285 2.418368 TGGTCTCTGCGCCAATTAAT 57.582 45.000 4.18 0.00 0.00 1.40
285 286 2.722094 TGGTCTCTGCGCCAATTAATT 58.278 42.857 4.18 0.00 0.00 1.40
286 287 2.682856 TGGTCTCTGCGCCAATTAATTC 59.317 45.455 4.18 0.00 0.00 2.17
287 288 2.945668 GGTCTCTGCGCCAATTAATTCT 59.054 45.455 4.18 0.00 0.00 2.40
288 289 3.378427 GGTCTCTGCGCCAATTAATTCTT 59.622 43.478 4.18 0.00 0.00 2.52
289 290 4.142381 GGTCTCTGCGCCAATTAATTCTTT 60.142 41.667 4.18 0.00 0.00 2.52
290 291 5.402398 GTCTCTGCGCCAATTAATTCTTTT 58.598 37.500 4.18 0.00 0.00 2.27
291 292 6.404293 GGTCTCTGCGCCAATTAATTCTTTTA 60.404 38.462 4.18 0.00 0.00 1.52
292 293 7.196331 GTCTCTGCGCCAATTAATTCTTTTAT 58.804 34.615 4.18 0.00 0.00 1.40
293 294 7.702348 GTCTCTGCGCCAATTAATTCTTTTATT 59.298 33.333 4.18 0.00 0.00 1.40
294 295 7.915397 TCTCTGCGCCAATTAATTCTTTTATTC 59.085 33.333 4.18 0.00 0.00 1.75
295 296 6.978080 TCTGCGCCAATTAATTCTTTTATTCC 59.022 34.615 4.18 0.00 0.00 3.01
296 297 6.634805 TGCGCCAATTAATTCTTTTATTCCA 58.365 32.000 4.18 0.00 0.00 3.53
297 298 6.756074 TGCGCCAATTAATTCTTTTATTCCAG 59.244 34.615 4.18 0.00 0.00 3.86
298 299 6.756542 GCGCCAATTAATTCTTTTATTCCAGT 59.243 34.615 0.00 0.00 0.00 4.00
299 300 7.277760 GCGCCAATTAATTCTTTTATTCCAGTT 59.722 33.333 0.00 0.00 0.00 3.16
300 301 9.796120 CGCCAATTAATTCTTTTATTCCAGTTA 57.204 29.630 0.00 0.00 0.00 2.24
316 317 8.830915 ATTCCAGTTAGTAAGAGAGATCTTGA 57.169 34.615 0.00 0.00 0.00 3.02
317 318 8.651589 TTCCAGTTAGTAAGAGAGATCTTGAA 57.348 34.615 0.00 0.00 0.00 2.69
318 319 8.057536 TCCAGTTAGTAAGAGAGATCTTGAAC 57.942 38.462 0.00 3.41 0.00 3.18
319 320 7.891183 TCCAGTTAGTAAGAGAGATCTTGAACT 59.109 37.037 0.00 0.00 33.14 3.01
320 321 9.179909 CCAGTTAGTAAGAGAGATCTTGAACTA 57.820 37.037 0.00 0.00 32.42 2.24
338 339 9.384764 CTTGAACTAAGAAATAAACCTAGAGGG 57.615 37.037 0.00 0.00 38.76 4.30
368 369 7.119709 TGAGGGTCATCTAATGTCGAATAAA 57.880 36.000 0.00 0.00 0.00 1.40
374 375 7.041984 GGTCATCTAATGTCGAATAAAACCTCC 60.042 40.741 0.00 0.00 0.00 4.30
383 384 2.990740 ATAAAACCTCCTTGGCCACA 57.009 45.000 3.88 0.00 40.22 4.17
393 394 2.640332 TCCTTGGCCACATACTACAACA 59.360 45.455 3.88 0.00 0.00 3.33
394 395 3.073209 TCCTTGGCCACATACTACAACAA 59.927 43.478 3.88 0.00 0.00 2.83
395 396 4.016444 CCTTGGCCACATACTACAACAAT 58.984 43.478 3.88 0.00 0.00 2.71
402 403 5.410132 GCCACATACTACAACAATGTACACA 59.590 40.000 0.00 0.00 41.05 3.72
403 404 6.619874 GCCACATACTACAACAATGTACACAC 60.620 42.308 0.00 0.00 41.05 3.82
404 405 6.128391 CCACATACTACAACAATGTACACACC 60.128 42.308 0.00 0.00 41.05 4.16
405 406 5.636121 ACATACTACAACAATGTACACACCG 59.364 40.000 0.00 0.00 41.05 4.94
406 407 4.062677 ACTACAACAATGTACACACCGT 57.937 40.909 0.00 0.00 41.05 4.83
407 408 4.053295 ACTACAACAATGTACACACCGTC 58.947 43.478 0.00 0.00 41.05 4.79
408 409 2.907634 ACAACAATGTACACACCGTCA 58.092 42.857 0.00 0.00 38.24 4.35
409 410 3.472652 ACAACAATGTACACACCGTCAT 58.527 40.909 0.00 0.00 38.24 3.06
410 411 3.249799 ACAACAATGTACACACCGTCATG 59.750 43.478 0.00 0.00 38.24 3.07
424 425 3.210227 CCGTCATGTACATTGGCCAATA 58.790 45.455 30.19 15.75 0.00 1.90
428 429 5.163663 CGTCATGTACATTGGCCAATACTTT 60.164 40.000 30.19 16.65 0.00 2.66
464 465 4.436050 CGTAGAGCTTGTACAAAGCCAATG 60.436 45.833 19.73 11.16 44.01 2.82
465 466 2.229784 AGAGCTTGTACAAAGCCAATGC 59.770 45.455 19.73 13.55 44.01 3.56
466 467 1.962807 AGCTTGTACAAAGCCAATGCA 59.037 42.857 19.73 0.00 44.01 3.96
467 468 2.564062 AGCTTGTACAAAGCCAATGCAT 59.436 40.909 19.73 0.00 44.01 3.96
468 469 3.763360 AGCTTGTACAAAGCCAATGCATA 59.237 39.130 19.73 0.00 44.01 3.14
469 470 3.859386 GCTTGTACAAAGCCAATGCATAC 59.141 43.478 10.03 0.00 41.13 2.39
470 471 4.617995 GCTTGTACAAAGCCAATGCATACA 60.618 41.667 10.03 0.00 41.13 2.29
471 472 5.653507 CTTGTACAAAGCCAATGCATACAT 58.346 37.500 10.03 0.00 41.13 2.29
472 473 5.247507 TGTACAAAGCCAATGCATACATC 57.752 39.130 0.00 0.00 41.13 3.06
544 546 0.040067 CCTCAAAGCCAAAGCGACAC 60.040 55.000 0.00 0.00 46.67 3.67
546 548 0.380378 TCAAAGCCAAAGCGACACAC 59.620 50.000 0.00 0.00 46.67 3.82
556 558 1.661821 GCGACACACTCAGACGCTT 60.662 57.895 0.00 0.00 44.67 4.68
567 569 2.612672 CTCAGACGCTTCCACTATACGA 59.387 50.000 0.00 0.00 0.00 3.43
585 587 9.095065 ACTATACGAAACTTTTTAGGTATGCAG 57.905 33.333 0.00 0.00 0.00 4.41
588 590 7.360575 ACGAAACTTTTTAGGTATGCAGTAG 57.639 36.000 0.00 0.00 0.00 2.57
589 591 6.932960 ACGAAACTTTTTAGGTATGCAGTAGT 59.067 34.615 0.00 0.00 0.00 2.73
590 592 7.095355 ACGAAACTTTTTAGGTATGCAGTAGTG 60.095 37.037 0.00 0.00 0.00 2.74
591 593 7.448748 AAACTTTTTAGGTATGCAGTAGTGG 57.551 36.000 0.00 0.00 0.00 4.00
592 594 4.941873 ACTTTTTAGGTATGCAGTAGTGGC 59.058 41.667 0.00 0.00 0.00 5.01
603 611 4.388485 TGCAGTAGTGGCCATACATATTG 58.612 43.478 9.72 8.39 0.00 1.90
632 640 3.731652 TCTTGCTGAAAACACATTGGG 57.268 42.857 0.00 0.00 0.00 4.12
641 649 1.261480 AACACATTGGGCGCCATTTA 58.739 45.000 30.85 10.31 31.53 1.40
643 651 1.102154 CACATTGGGCGCCATTTAGA 58.898 50.000 30.85 6.94 31.53 2.10
644 652 1.476085 CACATTGGGCGCCATTTAGAA 59.524 47.619 30.85 10.59 31.53 2.10
645 653 1.476488 ACATTGGGCGCCATTTAGAAC 59.524 47.619 30.85 8.62 31.53 3.01
648 656 0.250945 TGGGCGCCATTTAGAACACA 60.251 50.000 30.85 9.92 0.00 3.72
649 657 0.170339 GGGCGCCATTTAGAACACAC 59.830 55.000 30.85 0.98 0.00 3.82
651 659 1.135689 GGCGCCATTTAGAACACACAG 60.136 52.381 24.80 0.00 0.00 3.66
652 660 1.804151 GCGCCATTTAGAACACACAGA 59.196 47.619 0.00 0.00 0.00 3.41
653 661 2.412847 GCGCCATTTAGAACACACAGAC 60.413 50.000 0.00 0.00 0.00 3.51
654 662 3.067106 CGCCATTTAGAACACACAGACT 58.933 45.455 0.00 0.00 0.00 3.24
661 684 2.009774 AGAACACACAGACTGTTGCAC 58.990 47.619 5.04 6.16 31.83 4.57
662 685 1.064060 GAACACACAGACTGTTGCACC 59.936 52.381 5.04 0.00 31.83 5.01
687 710 7.012327 CCGAAAATGAGGTGCTTAATTATCTCA 59.988 37.037 4.98 4.98 36.00 3.27
688 711 8.397906 CGAAAATGAGGTGCTTAATTATCTCAA 58.602 33.333 6.26 0.00 35.33 3.02
689 712 9.727627 GAAAATGAGGTGCTTAATTATCTCAAG 57.272 33.333 6.26 0.00 35.33 3.02
690 713 6.874288 ATGAGGTGCTTAATTATCTCAAGC 57.126 37.500 6.26 3.41 43.92 4.01
703 726 8.891671 AATTATCTCAAGCACAAAAACAACAT 57.108 26.923 0.00 0.00 0.00 2.71
706 729 7.614124 ATCTCAAGCACAAAAACAACATTTT 57.386 28.000 0.00 0.00 32.89 1.82
760 783 9.620660 AGTTTATAGTTTTTACCATTCTTTGCG 57.379 29.630 0.00 0.00 0.00 4.85
768 791 3.106242 ACCATTCTTTGCGGGAAAAAC 57.894 42.857 0.00 0.00 0.00 2.43
769 792 2.698274 ACCATTCTTTGCGGGAAAAACT 59.302 40.909 0.00 0.00 0.00 2.66
773 796 3.073144 TCTTTGCGGGAAAAACTTTCG 57.927 42.857 0.00 0.00 0.00 3.46
785 809 7.968405 CGGGAAAAACTTTCGATCTATTCATTT 59.032 33.333 0.00 0.00 0.00 2.32
795 819 8.552083 TTCGATCTATTCATTTCATACCATGG 57.448 34.615 11.19 11.19 0.00 3.66
798 822 6.882610 TCTATTCATTTCATACCATGGCAC 57.117 37.500 13.04 0.00 0.00 5.01
825 849 7.758495 ACAAAGAACACGAGAAGTAACAAAAT 58.242 30.769 0.00 0.00 0.00 1.82
827 851 9.155053 CAAAGAACACGAGAAGTAACAAAATAC 57.845 33.333 0.00 0.00 0.00 1.89
829 853 7.848491 AGAACACGAGAAGTAACAAAATACAC 58.152 34.615 0.00 0.00 0.00 2.90
830 854 7.493320 AGAACACGAGAAGTAACAAAATACACA 59.507 33.333 0.00 0.00 0.00 3.72
831 855 6.940714 ACACGAGAAGTAACAAAATACACAC 58.059 36.000 0.00 0.00 0.00 3.82
832 856 6.535865 ACACGAGAAGTAACAAAATACACACA 59.464 34.615 0.00 0.00 0.00 3.72
833 857 7.225931 ACACGAGAAGTAACAAAATACACACAT 59.774 33.333 0.00 0.00 0.00 3.21
834 858 8.705134 CACGAGAAGTAACAAAATACACACATA 58.295 33.333 0.00 0.00 0.00 2.29
835 859 8.706035 ACGAGAAGTAACAAAATACACACATAC 58.294 33.333 0.00 0.00 0.00 2.39
836 860 8.705134 CGAGAAGTAACAAAATACACACATACA 58.295 33.333 0.00 0.00 0.00 2.29
841 865 9.461312 AGTAACAAAATACACACATACATCCAT 57.539 29.630 0.00 0.00 0.00 3.41
939 972 0.461961 ATAGTCGAAGCAGGCTGACC 59.538 55.000 20.86 0.47 31.75 4.02
960 993 6.869913 TGACCGAATAGACGTTAGACATTTTT 59.130 34.615 0.00 0.00 0.00 1.94
1000 1037 4.099881 AGCGCACATCATATTCCCAAAAAT 59.900 37.500 11.47 0.00 0.00 1.82
1040 1077 3.581024 ATGCACATTCAACTTCGCAAT 57.419 38.095 0.00 0.00 32.38 3.56
1050 1087 3.004629 TCAACTTCGCAATCAGCACAAAT 59.995 39.130 0.00 0.00 46.13 2.32
1085 2153 8.243426 TGAATACTCGATTTTGGAAAAGAATGG 58.757 33.333 0.00 0.00 0.00 3.16
1086 2154 7.938140 ATACTCGATTTTGGAAAAGAATGGA 57.062 32.000 0.00 0.00 0.00 3.41
1087 2155 6.259550 ACTCGATTTTGGAAAAGAATGGAG 57.740 37.500 0.00 0.00 39.79 3.86
1112 2180 2.028930 GGATTGCCGTATCTAGACCTGG 60.029 54.545 0.00 0.00 0.00 4.45
1113 2181 0.750850 TTGCCGTATCTAGACCTGGC 59.249 55.000 19.17 19.17 42.76 4.85
1114 2182 1.113517 TGCCGTATCTAGACCTGGCC 61.114 60.000 21.72 0.00 41.77 5.36
1116 2184 1.633774 CCGTATCTAGACCTGGCCAT 58.366 55.000 5.51 0.00 0.00 4.40
1117 2185 1.273606 CCGTATCTAGACCTGGCCATG 59.726 57.143 5.51 6.06 0.00 3.66
1118 2186 1.273606 CGTATCTAGACCTGGCCATGG 59.726 57.143 5.51 13.05 0.00 3.66
1119 2187 1.625818 GTATCTAGACCTGGCCATGGG 59.374 57.143 20.97 16.10 0.00 4.00
1120 2188 0.268869 ATCTAGACCTGGCCATGGGA 59.731 55.000 17.65 8.73 0.00 4.37
1121 2189 0.044092 TCTAGACCTGGCCATGGGAA 59.956 55.000 17.65 5.43 0.00 3.97
1122 2190 0.471617 CTAGACCTGGCCATGGGAAG 59.528 60.000 17.65 10.50 0.00 3.46
1123 2191 1.635817 TAGACCTGGCCATGGGAAGC 61.636 60.000 17.65 6.61 0.00 3.86
1143 2211 2.600470 GGCCTGGCCCGAAAAAGT 60.600 61.111 27.77 0.00 44.06 2.66
1144 2212 2.636412 GGCCTGGCCCGAAAAAGTC 61.636 63.158 27.77 0.00 44.06 3.01
1145 2213 2.636412 GCCTGGCCCGAAAAAGTCC 61.636 63.158 7.66 0.00 0.00 3.85
1146 2214 2.332654 CCTGGCCCGAAAAAGTCCG 61.333 63.158 0.00 0.00 0.00 4.79
1147 2215 1.302192 CTGGCCCGAAAAAGTCCGA 60.302 57.895 0.00 0.00 0.00 4.55
1148 2216 1.574702 CTGGCCCGAAAAAGTCCGAC 61.575 60.000 0.00 0.00 0.00 4.79
1149 2217 1.302271 GGCCCGAAAAAGTCCGACT 60.302 57.895 0.00 0.00 0.00 4.18
1150 2218 1.296755 GGCCCGAAAAAGTCCGACTC 61.297 60.000 0.35 0.00 0.00 3.36
1151 2219 1.623973 GCCCGAAAAAGTCCGACTCG 61.624 60.000 0.35 1.26 0.00 4.18
1199 2267 2.663826 GCTCGGGCCTAGATTATGAG 57.336 55.000 9.63 2.79 0.00 2.90
1200 2268 1.404851 GCTCGGGCCTAGATTATGAGC 60.405 57.143 9.63 9.55 40.31 4.26
1201 2269 1.205893 CTCGGGCCTAGATTATGAGCC 59.794 57.143 0.84 0.00 43.09 4.70
1203 2271 3.842869 GGCCTAGATTATGAGCCCG 57.157 57.895 0.00 0.00 37.66 6.13
1204 2272 1.267121 GGCCTAGATTATGAGCCCGA 58.733 55.000 0.00 0.00 37.66 5.14
1205 2273 1.623811 GGCCTAGATTATGAGCCCGAA 59.376 52.381 0.00 0.00 37.66 4.30
1206 2274 2.354203 GGCCTAGATTATGAGCCCGAAG 60.354 54.545 0.00 0.00 37.66 3.79
1233 2301 2.763710 GGCCGGGCCCATCATTTT 60.764 61.111 28.23 0.00 44.06 1.82
1234 2302 2.366393 GGCCGGGCCCATCATTTTT 61.366 57.895 28.23 0.00 44.06 1.94
1254 2322 5.689383 TTTTTCATTTCTCTGAAGGTCGG 57.311 39.130 0.00 0.00 36.55 4.79
1255 2323 3.334583 TTCATTTCTCTGAAGGTCGGG 57.665 47.619 0.00 0.00 31.65 5.14
1256 2324 1.066143 TCATTTCTCTGAAGGTCGGGC 60.066 52.381 0.00 0.00 0.00 6.13
1257 2325 0.253327 ATTTCTCTGAAGGTCGGGCC 59.747 55.000 0.00 0.00 37.58 5.80
1258 2326 2.167398 TTTCTCTGAAGGTCGGGCCG 62.167 60.000 22.51 22.51 43.70 6.13
1259 2327 4.148825 CTCTGAAGGTCGGGCCGG 62.149 72.222 27.98 8.04 43.70 6.13
1290 2358 2.385091 CCCGACGGGCTTTTACGTG 61.385 63.158 22.37 0.00 44.24 4.49
1291 2359 1.665599 CCGACGGGCTTTTACGTGT 60.666 57.895 5.81 0.00 44.24 4.49
1292 2360 1.223417 CCGACGGGCTTTTACGTGTT 61.223 55.000 5.81 0.00 44.24 3.32
1293 2361 0.162294 CGACGGGCTTTTACGTGTTC 59.838 55.000 0.00 0.00 44.24 3.18
1294 2362 0.162294 GACGGGCTTTTACGTGTTCG 59.838 55.000 0.00 0.00 44.24 3.95
1295 2363 1.223417 ACGGGCTTTTACGTGTTCGG 61.223 55.000 0.00 0.00 42.39 4.30
1296 2364 1.871077 GGGCTTTTACGTGTTCGGG 59.129 57.895 0.00 0.00 41.85 5.14
1297 2365 1.208358 GGCTTTTACGTGTTCGGGC 59.792 57.895 0.00 0.00 41.85 6.13
1298 2366 1.208358 GCTTTTACGTGTTCGGGCC 59.792 57.895 0.00 0.00 41.85 5.80
1299 2367 1.871077 CTTTTACGTGTTCGGGCCC 59.129 57.895 13.57 13.57 41.85 5.80
1300 2368 0.885596 CTTTTACGTGTTCGGGCCCA 60.886 55.000 24.92 6.15 41.85 5.36
1301 2369 0.885596 TTTTACGTGTTCGGGCCCAG 60.886 55.000 24.92 15.19 41.85 4.45
1302 2370 1.756408 TTTACGTGTTCGGGCCCAGA 61.756 55.000 24.92 17.49 41.85 3.86
1303 2371 1.756408 TTACGTGTTCGGGCCCAGAA 61.756 55.000 24.92 22.37 41.85 3.02
1304 2372 1.756408 TACGTGTTCGGGCCCAGAAA 61.756 55.000 24.92 10.10 41.85 2.52
1305 2373 1.894756 CGTGTTCGGGCCCAGAAAA 60.895 57.895 24.92 18.05 0.00 2.29
1306 2374 1.658114 GTGTTCGGGCCCAGAAAAC 59.342 57.895 24.55 24.55 0.00 2.43
1307 2375 1.104577 GTGTTCGGGCCCAGAAAACA 61.105 55.000 29.58 25.00 36.21 2.83
1308 2376 0.821711 TGTTCGGGCCCAGAAAACAG 60.822 55.000 24.92 1.98 0.00 3.16
1309 2377 1.228429 TTCGGGCCCAGAAAACAGG 60.228 57.895 24.92 1.11 0.00 4.00
1310 2378 3.373565 CGGGCCCAGAAAACAGGC 61.374 66.667 24.92 0.00 46.37 4.85
1313 2381 3.373565 GCCCAGAAAACAGGCCCG 61.374 66.667 0.00 0.00 41.00 6.13
1314 2382 2.434331 CCCAGAAAACAGGCCCGA 59.566 61.111 0.00 0.00 0.00 5.14
1315 2383 1.000896 CCCAGAAAACAGGCCCGAT 60.001 57.895 0.00 0.00 0.00 4.18
1316 2384 1.315257 CCCAGAAAACAGGCCCGATG 61.315 60.000 0.00 0.00 0.00 3.84
1317 2385 1.315257 CCAGAAAACAGGCCCGATGG 61.315 60.000 0.00 0.00 0.00 3.51
1318 2386 0.609131 CAGAAAACAGGCCCGATGGT 60.609 55.000 0.00 0.00 0.00 3.55
1319 2387 0.322546 AGAAAACAGGCCCGATGGTC 60.323 55.000 0.00 0.00 36.05 4.02
1320 2388 1.644786 GAAAACAGGCCCGATGGTCG 61.645 60.000 0.00 0.00 42.85 4.79
1366 2434 3.050089 TTTTTCATCGGGCTTGGCT 57.950 47.368 0.00 0.00 0.00 4.75
1367 2435 2.208132 TTTTTCATCGGGCTTGGCTA 57.792 45.000 0.00 0.00 0.00 3.93
1368 2436 1.750193 TTTTCATCGGGCTTGGCTAG 58.250 50.000 0.00 0.00 0.00 3.42
1369 2437 0.107214 TTTCATCGGGCTTGGCTAGG 60.107 55.000 0.00 0.00 0.00 3.02
1391 2459 4.256180 GCCCGAGGTATGGCCAGG 62.256 72.222 13.05 6.01 41.97 4.45
1392 2460 2.768344 CCCGAGGTATGGCCAGGT 60.768 66.667 13.05 0.00 40.61 4.00
1396 2464 2.253610 CCGAGGTATGGCCAGGTATAA 58.746 52.381 13.05 0.00 40.61 0.98
1459 2534 1.948104 TTTCACTCCACTTCACCACG 58.052 50.000 0.00 0.00 0.00 4.94
1464 2539 0.387367 CTCCACTTCACCACGTCGAG 60.387 60.000 0.00 0.00 0.00 4.04
1468 2543 1.521423 CACTTCACCACGTCGAGTTTC 59.479 52.381 0.00 0.00 0.00 2.78
1490 2565 5.850278 TCTTTTTCATCTCCCTCCTACCTA 58.150 41.667 0.00 0.00 0.00 3.08
1493 2568 5.688220 TTTCATCTCCCTCCTACCTATCT 57.312 43.478 0.00 0.00 0.00 1.98
1527 2603 1.495148 CAATTACCTCCCCTTCCCTCC 59.505 57.143 0.00 0.00 0.00 4.30
1635 2725 3.677648 CCACCGTCCCGTCTCGTT 61.678 66.667 0.00 0.00 0.00 3.85
1645 2735 0.716108 CCGTCTCGTTTGCTCATCAC 59.284 55.000 0.00 0.00 0.00 3.06
1731 3161 2.554032 CGCCTCAGGTGAAAGTGAAAAT 59.446 45.455 0.00 0.00 34.74 1.82
1772 3202 0.033208 TGTGAAGATGGGGCCATTCC 60.033 55.000 4.39 0.00 36.70 3.01
1796 3226 1.012086 CGACTCCGACGAGGTGATTA 58.988 55.000 0.00 0.00 40.77 1.75
1842 3272 0.108567 GAGGTCAAGAGGGAGCGAAC 60.109 60.000 0.00 0.00 40.14 3.95
2058 3488 0.108472 GTCCCGGTAAAGGAGGAACG 60.108 60.000 0.00 0.00 32.84 3.95
2104 3537 4.354208 TGTAAAGGAGGAAGAGGAGGAT 57.646 45.455 0.00 0.00 0.00 3.24
2173 3606 0.244178 AGAAGAGAAACCGCGGAGAC 59.756 55.000 35.90 21.00 0.00 3.36
2465 3906 1.903877 CGAAGGCAGGATCAGGGTGT 61.904 60.000 0.00 0.00 0.00 4.16
2537 3978 0.907230 AGCTGGAGAGGTTCCCACTC 60.907 60.000 0.00 0.00 46.19 3.51
2649 4093 0.818296 AGATCGGGAAGTTGTCTCCG 59.182 55.000 0.00 0.00 39.86 4.63
2781 4225 4.174411 TGTCAGGTAACGACTCTGAATG 57.826 45.455 0.00 0.00 46.39 2.67
2806 4251 5.011635 TCTCTGAACATGGTTGCTACTTGTA 59.988 40.000 0.00 0.00 0.00 2.41
2834 4279 7.279313 TCCTGTACTTATTGACGCTAAATTTCC 59.721 37.037 0.00 0.00 0.00 3.13
2979 4521 1.377333 CCTGAAACCCGAAGCTCCC 60.377 63.158 0.00 0.00 0.00 4.30
3027 4579 3.060895 GCGACATACACTGACTTGCTTAC 59.939 47.826 0.00 0.00 0.00 2.34
3038 4590 1.000060 ACTTGCTTACGGTAGCGTCAA 60.000 47.619 24.95 19.60 44.18 3.18
3156 4708 2.995872 GCTTCTCTCCTGCGTCCGT 61.996 63.158 0.00 0.00 0.00 4.69
3207 4759 2.327343 GCTGATGTGCGTTGAGGCA 61.327 57.895 0.00 0.00 41.45 4.75
3248 4800 2.758327 ACGCGGCTCCATAGGACA 60.758 61.111 12.47 0.00 0.00 4.02
3301 4853 2.684943 TCTTGGGACACTTGTGGTAGA 58.315 47.619 5.72 0.00 39.29 2.59
3321 7628 2.579657 TTGTCGGCTCGGTCCATGT 61.580 57.895 0.00 0.00 0.00 3.21
3331 7638 2.282180 GTCCATGTGCCCCAACGT 60.282 61.111 0.00 0.00 0.00 3.99
3336 7643 3.126703 ATGTGCCCCAACGTGGACA 62.127 57.895 0.62 0.62 40.96 4.02
3389 7696 1.305201 GTGATGTGGTGTTCGTGGTT 58.695 50.000 0.00 0.00 0.00 3.67
3398 7705 1.465387 GTGTTCGTGGTTTGTGTGTGA 59.535 47.619 0.00 0.00 0.00 3.58
3423 7730 0.533531 CTGTGGAGTGTGAGCTGCAA 60.534 55.000 1.02 0.00 38.51 4.08
3469 7776 4.314440 AAGAGCGAGCGGTGGCAA 62.314 61.111 23.42 0.00 43.41 4.52
3493 7800 2.426023 GCGGTGGCCTCGGATATT 59.574 61.111 15.78 0.00 0.00 1.28
3540 7847 2.674380 CCTTGAGCAGTGTGGGCC 60.674 66.667 0.00 0.00 0.00 5.80
3626 7933 1.455587 CAAGGTGGTGTTGGTGGCT 60.456 57.895 0.00 0.00 0.00 4.75
3629 7936 2.832661 GTGGTGTTGGTGGCTGCA 60.833 61.111 0.50 0.00 0.00 4.41
3630 7937 2.198150 TGGTGTTGGTGGCTGCAT 59.802 55.556 0.50 0.00 0.00 3.96
3633 7940 0.322456 GGTGTTGGTGGCTGCATAGA 60.322 55.000 0.50 0.00 0.00 1.98
3740 8047 1.887854 CTCATGATGTTGGTGTTGGCA 59.112 47.619 0.00 0.00 0.00 4.92
3742 8049 2.898612 TCATGATGTTGGTGTTGGCATT 59.101 40.909 0.00 0.00 0.00 3.56
3743 8050 2.816204 TGATGTTGGTGTTGGCATTG 57.184 45.000 0.00 0.00 0.00 2.82
3768 8075 1.131126 CGATGTGGCAAAGATGGTGAC 59.869 52.381 0.00 0.00 0.00 3.67
3840 8147 3.906846 TGTTTTTATGGGATTGCCTTGGT 59.093 39.130 0.00 0.00 0.00 3.67
3851 8158 1.781786 TGCCTTGGTTGGTTTGCTAA 58.218 45.000 0.00 0.00 0.00 3.09
3852 8159 1.410882 TGCCTTGGTTGGTTTGCTAAC 59.589 47.619 2.11 2.11 35.65 2.34
3854 8161 1.679153 CCTTGGTTGGTTTGCTAACGT 59.321 47.619 4.95 0.00 37.01 3.99
3870 8177 4.442073 GCTAACGTTGTGAAGTCGAAACTA 59.558 41.667 11.99 0.00 33.48 2.24
3871 8178 5.118203 GCTAACGTTGTGAAGTCGAAACTAT 59.882 40.000 11.99 0.00 33.48 2.12
3926 8233 1.663695 CACAACAGGTGGTTCGTTCT 58.336 50.000 0.00 0.00 44.04 3.01
3927 8234 2.014128 CACAACAGGTGGTTCGTTCTT 58.986 47.619 0.00 0.00 44.04 2.52
3938 8245 4.511826 GTGGTTCGTTCTTTGATCTTCTGT 59.488 41.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 9.122779 TGCATATTTATCAATGACAGACAATGA 57.877 29.630 0.00 0.00 41.73 2.57
17 18 9.394477 CTGCATATTTATCAATGACAGACAATG 57.606 33.333 0.00 0.00 33.16 2.82
18 19 8.573885 CCTGCATATTTATCAATGACAGACAAT 58.426 33.333 0.00 0.00 33.16 2.71
19 20 7.774625 TCCTGCATATTTATCAATGACAGACAA 59.225 33.333 0.00 0.00 33.16 3.18
20 21 7.227314 GTCCTGCATATTTATCAATGACAGACA 59.773 37.037 0.00 0.00 33.16 3.41
21 22 7.227314 TGTCCTGCATATTTATCAATGACAGAC 59.773 37.037 0.00 0.00 33.16 3.51
22 23 7.281841 TGTCCTGCATATTTATCAATGACAGA 58.718 34.615 0.00 0.00 33.16 3.41
23 24 7.500720 TGTCCTGCATATTTATCAATGACAG 57.499 36.000 0.00 0.00 32.15 3.51
24 25 7.878547 TTGTCCTGCATATTTATCAATGACA 57.121 32.000 0.00 0.00 0.00 3.58
25 26 9.585099 TTTTTGTCCTGCATATTTATCAATGAC 57.415 29.630 0.00 0.00 0.00 3.06
26 27 9.806203 CTTTTTGTCCTGCATATTTATCAATGA 57.194 29.630 0.00 0.00 0.00 2.57
27 28 9.806203 TCTTTTTGTCCTGCATATTTATCAATG 57.194 29.630 0.00 0.00 0.00 2.82
30 31 9.638239 GTTTCTTTTTGTCCTGCATATTTATCA 57.362 29.630 0.00 0.00 0.00 2.15
31 32 8.798153 CGTTTCTTTTTGTCCTGCATATTTATC 58.202 33.333 0.00 0.00 0.00 1.75
32 33 7.275560 GCGTTTCTTTTTGTCCTGCATATTTAT 59.724 33.333 0.00 0.00 0.00 1.40
33 34 6.584563 GCGTTTCTTTTTGTCCTGCATATTTA 59.415 34.615 0.00 0.00 0.00 1.40
34 35 5.405269 GCGTTTCTTTTTGTCCTGCATATTT 59.595 36.000 0.00 0.00 0.00 1.40
35 36 4.923281 GCGTTTCTTTTTGTCCTGCATATT 59.077 37.500 0.00 0.00 0.00 1.28
36 37 4.022416 TGCGTTTCTTTTTGTCCTGCATAT 60.022 37.500 0.00 0.00 0.00 1.78
37 38 3.316588 TGCGTTTCTTTTTGTCCTGCATA 59.683 39.130 0.00 0.00 0.00 3.14
38 39 2.100584 TGCGTTTCTTTTTGTCCTGCAT 59.899 40.909 0.00 0.00 0.00 3.96
39 40 1.474478 TGCGTTTCTTTTTGTCCTGCA 59.526 42.857 0.00 0.00 0.00 4.41
40 41 2.202295 TGCGTTTCTTTTTGTCCTGC 57.798 45.000 0.00 0.00 0.00 4.85
41 42 4.378616 CGTATTGCGTTTCTTTTTGTCCTG 59.621 41.667 0.00 0.00 35.54 3.86
42 43 4.273969 TCGTATTGCGTTTCTTTTTGTCCT 59.726 37.500 0.00 0.00 42.13 3.85
43 44 4.529446 TCGTATTGCGTTTCTTTTTGTCC 58.471 39.130 0.00 0.00 42.13 4.02
44 45 5.452944 TGTTCGTATTGCGTTTCTTTTTGTC 59.547 36.000 0.00 0.00 42.13 3.18
45 46 5.333513 TGTTCGTATTGCGTTTCTTTTTGT 58.666 33.333 0.00 0.00 42.13 2.83
46 47 5.858159 TGTTCGTATTGCGTTTCTTTTTG 57.142 34.783 0.00 0.00 42.13 2.44
47 48 8.736751 ATTATGTTCGTATTGCGTTTCTTTTT 57.263 26.923 0.00 0.00 42.13 1.94
48 49 8.018520 TGATTATGTTCGTATTGCGTTTCTTTT 58.981 29.630 0.00 0.00 42.13 2.27
49 50 7.523219 TGATTATGTTCGTATTGCGTTTCTTT 58.477 30.769 0.00 0.00 42.13 2.52
50 51 7.067532 TGATTATGTTCGTATTGCGTTTCTT 57.932 32.000 0.00 0.00 42.13 2.52
51 52 6.656314 TGATTATGTTCGTATTGCGTTTCT 57.344 33.333 0.00 0.00 42.13 2.52
52 53 7.892445 AATGATTATGTTCGTATTGCGTTTC 57.108 32.000 0.00 0.00 42.13 2.78
53 54 9.217223 GTAAATGATTATGTTCGTATTGCGTTT 57.783 29.630 0.00 0.00 42.13 3.60
54 55 8.391859 TGTAAATGATTATGTTCGTATTGCGTT 58.608 29.630 0.00 0.00 42.13 4.84
55 56 7.849026 GTGTAAATGATTATGTTCGTATTGCGT 59.151 33.333 0.00 0.00 42.13 5.24
56 57 7.848539 TGTGTAAATGATTATGTTCGTATTGCG 59.151 33.333 0.00 0.00 43.01 4.85
57 58 8.943925 GTGTGTAAATGATTATGTTCGTATTGC 58.056 33.333 0.00 0.00 0.00 3.56
66 67 9.594478 TCGTGAATAGTGTGTAAATGATTATGT 57.406 29.630 0.00 0.00 0.00 2.29
69 70 9.863845 TTCTCGTGAATAGTGTGTAAATGATTA 57.136 29.630 0.00 0.00 0.00 1.75
70 71 8.771920 TTCTCGTGAATAGTGTGTAAATGATT 57.228 30.769 0.00 0.00 0.00 2.57
71 72 8.771920 TTTCTCGTGAATAGTGTGTAAATGAT 57.228 30.769 0.02 0.00 31.56 2.45
72 73 8.771920 ATTTCTCGTGAATAGTGTGTAAATGA 57.228 30.769 0.02 0.00 31.56 2.57
75 76 9.309516 GGATATTTCTCGTGAATAGTGTGTAAA 57.690 33.333 0.02 0.00 31.56 2.01
76 77 8.692710 AGGATATTTCTCGTGAATAGTGTGTAA 58.307 33.333 0.02 0.00 31.56 2.41
77 78 8.234136 AGGATATTTCTCGTGAATAGTGTGTA 57.766 34.615 0.02 0.00 31.56 2.90
78 79 7.113658 AGGATATTTCTCGTGAATAGTGTGT 57.886 36.000 0.02 0.00 31.56 3.72
79 80 7.706607 TGAAGGATATTTCTCGTGAATAGTGTG 59.293 37.037 0.02 0.00 31.56 3.82
80 81 7.782049 TGAAGGATATTTCTCGTGAATAGTGT 58.218 34.615 0.02 0.00 31.56 3.55
81 82 8.648557 TTGAAGGATATTTCTCGTGAATAGTG 57.351 34.615 0.02 0.00 31.56 2.74
82 83 9.838339 ATTTGAAGGATATTTCTCGTGAATAGT 57.162 29.630 0.02 0.00 31.56 2.12
85 86 8.960591 ACAATTTGAAGGATATTTCTCGTGAAT 58.039 29.630 2.79 0.00 31.56 2.57
86 87 8.335532 ACAATTTGAAGGATATTTCTCGTGAA 57.664 30.769 2.79 0.00 0.00 3.18
87 88 7.921786 ACAATTTGAAGGATATTTCTCGTGA 57.078 32.000 2.79 0.00 0.00 4.35
88 89 8.970691 AAACAATTTGAAGGATATTTCTCGTG 57.029 30.769 2.79 0.00 0.00 4.35
90 91 9.503427 GGTAAACAATTTGAAGGATATTTCTCG 57.497 33.333 2.79 0.00 0.00 4.04
97 98 9.474313 AGCAATAGGTAAACAATTTGAAGGATA 57.526 29.630 2.79 0.00 0.00 2.59
98 99 8.366359 AGCAATAGGTAAACAATTTGAAGGAT 57.634 30.769 2.79 0.00 0.00 3.24
99 100 7.775053 AGCAATAGGTAAACAATTTGAAGGA 57.225 32.000 2.79 0.00 0.00 3.36
100 101 8.711457 CAAAGCAATAGGTAAACAATTTGAAGG 58.289 33.333 2.79 0.00 0.00 3.46
101 102 9.260002 ACAAAGCAATAGGTAAACAATTTGAAG 57.740 29.630 2.79 0.00 0.00 3.02
115 116 9.382244 GCGAATTAACTAATACAAAGCAATAGG 57.618 33.333 0.00 0.00 0.00 2.57
118 119 9.855021 AAAGCGAATTAACTAATACAAAGCAAT 57.145 25.926 0.00 0.00 0.00 3.56
119 120 9.685828 AAAAGCGAATTAACTAATACAAAGCAA 57.314 25.926 0.00 0.00 0.00 3.91
120 121 9.685828 AAAAAGCGAATTAACTAATACAAAGCA 57.314 25.926 0.00 0.00 0.00 3.91
145 146 2.614983 GCGTGGAGACCAACTACAAAAA 59.385 45.455 0.00 0.00 41.61 1.94
146 147 2.215196 GCGTGGAGACCAACTACAAAA 58.785 47.619 0.00 0.00 41.61 2.44
147 148 1.541670 GGCGTGGAGACCAACTACAAA 60.542 52.381 0.00 0.00 41.61 2.83
148 149 0.034337 GGCGTGGAGACCAACTACAA 59.966 55.000 0.00 0.00 41.61 2.41
149 150 1.669440 GGCGTGGAGACCAACTACA 59.331 57.895 0.00 0.00 37.07 2.74
150 151 1.445582 CGGCGTGGAGACCAACTAC 60.446 63.158 0.00 0.00 34.18 2.73
151 152 0.968901 ATCGGCGTGGAGACCAACTA 60.969 55.000 6.85 0.00 34.18 2.24
152 153 2.283529 ATCGGCGTGGAGACCAACT 61.284 57.895 6.85 0.00 34.18 3.16
153 154 2.100631 CATCGGCGTGGAGACCAAC 61.101 63.158 6.85 0.00 34.18 3.77
154 155 2.264480 CATCGGCGTGGAGACCAA 59.736 61.111 6.85 0.00 34.18 3.67
155 156 2.678580 TCATCGGCGTGGAGACCA 60.679 61.111 6.85 0.00 0.00 4.02
156 157 2.202756 GTCATCGGCGTGGAGACC 60.203 66.667 6.85 0.00 0.00 3.85
157 158 1.517257 CAGTCATCGGCGTGGAGAC 60.517 63.158 6.85 10.83 0.00 3.36
158 159 2.885113 CAGTCATCGGCGTGGAGA 59.115 61.111 6.85 0.00 0.00 3.71
159 160 2.887568 GCAGTCATCGGCGTGGAG 60.888 66.667 6.85 0.00 0.00 3.86
160 161 2.520465 AATGCAGTCATCGGCGTGGA 62.520 55.000 6.85 2.58 37.57 4.02
161 162 1.647545 AAATGCAGTCATCGGCGTGG 61.648 55.000 6.85 0.00 37.57 4.94
162 163 0.521867 CAAATGCAGTCATCGGCGTG 60.522 55.000 6.85 4.88 37.57 5.34
163 164 1.647545 CCAAATGCAGTCATCGGCGT 61.648 55.000 6.85 0.00 37.57 5.68
164 165 1.063006 CCAAATGCAGTCATCGGCG 59.937 57.895 0.00 0.00 37.57 6.46
165 166 1.226773 GCCAAATGCAGTCATCGGC 60.227 57.895 0.00 0.00 40.77 5.54
166 167 0.099968 CAGCCAAATGCAGTCATCGG 59.900 55.000 0.00 0.00 44.83 4.18
167 168 0.806868 ACAGCCAAATGCAGTCATCG 59.193 50.000 0.00 0.00 44.83 3.84
168 169 2.991190 CAAACAGCCAAATGCAGTCATC 59.009 45.455 0.00 0.00 44.83 2.92
169 170 2.289195 CCAAACAGCCAAATGCAGTCAT 60.289 45.455 0.00 0.00 44.83 3.06
170 171 1.068895 CCAAACAGCCAAATGCAGTCA 59.931 47.619 0.00 0.00 44.83 3.41
171 172 1.340889 TCCAAACAGCCAAATGCAGTC 59.659 47.619 0.00 0.00 44.83 3.51
172 173 1.412079 TCCAAACAGCCAAATGCAGT 58.588 45.000 0.00 0.00 44.83 4.40
173 174 2.754946 ATCCAAACAGCCAAATGCAG 57.245 45.000 0.00 0.00 44.83 4.41
174 175 3.164268 AGTATCCAAACAGCCAAATGCA 58.836 40.909 0.00 0.00 44.83 3.96
175 176 3.874392 AGTATCCAAACAGCCAAATGC 57.126 42.857 0.00 0.00 41.71 3.56
176 177 5.047802 AGTGAAGTATCCAAACAGCCAAATG 60.048 40.000 0.00 0.00 0.00 2.32
177 178 5.079643 AGTGAAGTATCCAAACAGCCAAAT 58.920 37.500 0.00 0.00 0.00 2.32
178 179 4.469657 AGTGAAGTATCCAAACAGCCAAA 58.530 39.130 0.00 0.00 0.00 3.28
179 180 4.098914 AGTGAAGTATCCAAACAGCCAA 57.901 40.909 0.00 0.00 0.00 4.52
180 181 3.788227 AGTGAAGTATCCAAACAGCCA 57.212 42.857 0.00 0.00 0.00 4.75
181 182 6.759497 ATTAAGTGAAGTATCCAAACAGCC 57.241 37.500 0.00 0.00 0.00 4.85
182 183 7.755373 GGAAATTAAGTGAAGTATCCAAACAGC 59.245 37.037 0.00 0.00 0.00 4.40
183 184 9.014297 AGGAAATTAAGTGAAGTATCCAAACAG 57.986 33.333 0.00 0.00 0.00 3.16
184 185 8.934023 AGGAAATTAAGTGAAGTATCCAAACA 57.066 30.769 0.00 0.00 0.00 2.83
229 230 9.724839 CGGAAGTTAAAAGTGAACTATTTGAAA 57.275 29.630 0.00 0.00 36.10 2.69
230 231 7.858879 GCGGAAGTTAAAAGTGAACTATTTGAA 59.141 33.333 0.00 0.00 36.10 2.69
231 232 7.357303 GCGGAAGTTAAAAGTGAACTATTTGA 58.643 34.615 0.00 0.00 36.10 2.69
232 233 6.302313 CGCGGAAGTTAAAAGTGAACTATTTG 59.698 38.462 0.00 0.00 36.10 2.32
233 234 6.203338 TCGCGGAAGTTAAAAGTGAACTATTT 59.797 34.615 6.13 0.00 36.10 1.40
234 235 5.697633 TCGCGGAAGTTAAAAGTGAACTATT 59.302 36.000 6.13 0.00 36.10 1.73
235 236 5.232463 TCGCGGAAGTTAAAAGTGAACTAT 58.768 37.500 6.13 0.00 36.10 2.12
236 237 4.619973 TCGCGGAAGTTAAAAGTGAACTA 58.380 39.130 6.13 0.00 36.10 2.24
237 238 3.460103 TCGCGGAAGTTAAAAGTGAACT 58.540 40.909 6.13 0.00 38.81 3.01
238 239 3.865224 TCGCGGAAGTTAAAAGTGAAC 57.135 42.857 6.13 0.00 0.00 3.18
239 240 3.810941 ACATCGCGGAAGTTAAAAGTGAA 59.189 39.130 6.13 0.00 0.00 3.18
240 241 3.395639 ACATCGCGGAAGTTAAAAGTGA 58.604 40.909 6.13 0.00 0.00 3.41
241 242 3.806316 ACATCGCGGAAGTTAAAAGTG 57.194 42.857 6.13 0.00 0.00 3.16
242 243 4.563061 ACTACATCGCGGAAGTTAAAAGT 58.437 39.130 6.13 0.26 0.00 2.66
243 244 5.313623 CAACTACATCGCGGAAGTTAAAAG 58.686 41.667 6.13 0.00 31.20 2.27
244 245 4.152759 CCAACTACATCGCGGAAGTTAAAA 59.847 41.667 6.13 0.00 31.20 1.52
245 246 3.680937 CCAACTACATCGCGGAAGTTAAA 59.319 43.478 6.13 0.00 31.20 1.52
246 247 3.255725 CCAACTACATCGCGGAAGTTAA 58.744 45.455 6.13 0.00 31.20 2.01
247 248 2.231964 ACCAACTACATCGCGGAAGTTA 59.768 45.455 6.13 0.00 31.20 2.24
248 249 1.001633 ACCAACTACATCGCGGAAGTT 59.998 47.619 6.13 8.31 32.52 2.66
249 250 0.606604 ACCAACTACATCGCGGAAGT 59.393 50.000 6.13 5.17 0.00 3.01
250 251 1.135083 AGACCAACTACATCGCGGAAG 60.135 52.381 6.13 1.00 0.00 3.46
251 252 0.892755 AGACCAACTACATCGCGGAA 59.107 50.000 6.13 0.00 0.00 4.30
252 253 0.454600 GAGACCAACTACATCGCGGA 59.545 55.000 6.13 0.00 0.00 5.54
253 254 0.456221 AGAGACCAACTACATCGCGG 59.544 55.000 6.13 0.00 0.00 6.46
254 255 1.550065 CAGAGACCAACTACATCGCG 58.450 55.000 0.00 0.00 0.00 5.87
255 256 1.281899 GCAGAGACCAACTACATCGC 58.718 55.000 0.00 0.00 0.00 4.58
256 257 1.550065 CGCAGAGACCAACTACATCG 58.450 55.000 0.00 0.00 0.00 3.84
257 258 1.281899 GCGCAGAGACCAACTACATC 58.718 55.000 0.30 0.00 0.00 3.06
258 259 0.108138 GGCGCAGAGACCAACTACAT 60.108 55.000 10.83 0.00 0.00 2.29
259 260 1.292223 GGCGCAGAGACCAACTACA 59.708 57.895 10.83 0.00 0.00 2.74
260 261 0.320421 TTGGCGCAGAGACCAACTAC 60.320 55.000 10.83 0.00 40.98 2.73
261 262 2.054458 TTGGCGCAGAGACCAACTA 58.946 52.632 10.83 0.00 40.98 2.24
262 263 2.828868 TTGGCGCAGAGACCAACT 59.171 55.556 10.83 0.00 40.98 3.16
265 266 2.418368 ATTAATTGGCGCAGAGACCA 57.582 45.000 10.83 0.00 0.00 4.02
266 267 2.945668 AGAATTAATTGGCGCAGAGACC 59.054 45.455 10.83 0.00 0.00 3.85
267 268 4.622701 AAGAATTAATTGGCGCAGAGAC 57.377 40.909 10.83 0.00 0.00 3.36
268 269 5.643379 AAAAGAATTAATTGGCGCAGAGA 57.357 34.783 10.83 0.00 0.00 3.10
269 270 7.168135 GGAATAAAAGAATTAATTGGCGCAGAG 59.832 37.037 10.83 0.00 0.00 3.35
270 271 6.978080 GGAATAAAAGAATTAATTGGCGCAGA 59.022 34.615 10.83 0.00 0.00 4.26
271 272 6.756074 TGGAATAAAAGAATTAATTGGCGCAG 59.244 34.615 10.83 0.00 0.00 5.18
272 273 6.634805 TGGAATAAAAGAATTAATTGGCGCA 58.365 32.000 10.83 0.00 0.00 6.09
273 274 6.756542 ACTGGAATAAAAGAATTAATTGGCGC 59.243 34.615 5.17 0.00 0.00 6.53
274 275 8.702163 AACTGGAATAAAAGAATTAATTGGCG 57.298 30.769 5.17 0.00 0.00 5.69
290 291 9.922477 TCAAGATCTCTCTTACTAACTGGAATA 57.078 33.333 0.00 0.00 39.78 1.75
291 292 8.830915 TCAAGATCTCTCTTACTAACTGGAAT 57.169 34.615 0.00 0.00 39.78 3.01
292 293 8.524487 GTTCAAGATCTCTCTTACTAACTGGAA 58.476 37.037 0.00 0.00 39.78 3.53
293 294 7.891183 AGTTCAAGATCTCTCTTACTAACTGGA 59.109 37.037 0.00 0.00 39.78 3.86
294 295 8.062065 AGTTCAAGATCTCTCTTACTAACTGG 57.938 38.462 0.00 0.00 39.78 4.00
312 313 9.384764 CCCTCTAGGTTTATTTCTTAGTTCAAG 57.615 37.037 0.00 0.00 35.38 3.02
323 324 8.360930 CCCTCAGGATACCCTCTAGGTTTATTT 61.361 44.444 0.00 0.00 40.73 1.40
324 325 6.928817 CCCTCAGGATACCCTCTAGGTTTATT 60.929 46.154 0.00 0.00 40.73 1.40
325 326 5.461317 CCCTCAGGATACCCTCTAGGTTTAT 60.461 48.000 0.00 0.00 40.73 1.40
326 327 4.140758 CCCTCAGGATACCCTCTAGGTTTA 60.141 50.000 0.00 0.00 40.73 2.01
327 328 3.375430 CCCTCAGGATACCCTCTAGGTTT 60.375 52.174 0.00 0.00 40.73 3.27
328 329 2.180308 CCCTCAGGATACCCTCTAGGTT 59.820 54.545 0.00 0.00 40.73 3.50
329 330 1.790157 CCCTCAGGATACCCTCTAGGT 59.210 57.143 0.00 0.00 44.79 3.08
330 331 1.790157 ACCCTCAGGATACCCTCTAGG 59.210 57.143 0.00 0.00 42.02 3.02
331 332 2.447429 TGACCCTCAGGATACCCTCTAG 59.553 54.545 0.00 0.00 42.02 2.43
332 333 2.510330 TGACCCTCAGGATACCCTCTA 58.490 52.381 0.00 0.00 42.02 2.43
333 334 1.319947 TGACCCTCAGGATACCCTCT 58.680 55.000 0.00 0.00 42.02 3.69
334 335 2.158234 AGATGACCCTCAGGATACCCTC 60.158 54.545 0.00 0.00 42.02 4.30
335 336 1.869648 AGATGACCCTCAGGATACCCT 59.130 52.381 0.00 0.00 45.74 4.34
336 337 2.407340 AGATGACCCTCAGGATACCC 57.593 55.000 0.00 0.00 36.73 3.69
337 338 4.841246 ACATTAGATGACCCTCAGGATACC 59.159 45.833 0.00 0.00 36.73 2.73
338 339 5.336055 CGACATTAGATGACCCTCAGGATAC 60.336 48.000 0.00 0.00 36.73 2.24
339 340 4.767409 CGACATTAGATGACCCTCAGGATA 59.233 45.833 0.00 0.00 36.73 2.59
340 341 3.576118 CGACATTAGATGACCCTCAGGAT 59.424 47.826 0.00 0.00 36.73 3.24
341 342 2.959030 CGACATTAGATGACCCTCAGGA 59.041 50.000 0.00 0.00 36.73 3.86
342 343 2.959030 TCGACATTAGATGACCCTCAGG 59.041 50.000 0.00 0.00 40.04 3.86
343 344 4.655762 TTCGACATTAGATGACCCTCAG 57.344 45.455 0.00 0.00 0.00 3.35
344 345 6.724893 TTATTCGACATTAGATGACCCTCA 57.275 37.500 0.00 0.00 0.00 3.86
345 346 7.041984 GGTTTTATTCGACATTAGATGACCCTC 60.042 40.741 0.00 0.00 0.00 4.30
346 347 6.766467 GGTTTTATTCGACATTAGATGACCCT 59.234 38.462 0.00 0.00 0.00 4.34
347 348 6.766467 AGGTTTTATTCGACATTAGATGACCC 59.234 38.462 0.00 0.00 0.00 4.46
348 349 7.041984 GGAGGTTTTATTCGACATTAGATGACC 60.042 40.741 0.00 0.00 0.00 4.02
368 369 1.372501 AGTATGTGGCCAAGGAGGTT 58.627 50.000 7.24 0.00 40.61 3.50
374 375 4.458989 ACATTGTTGTAGTATGTGGCCAAG 59.541 41.667 7.24 0.00 33.16 3.61
383 384 5.786311 ACGGTGTGTACATTGTTGTAGTAT 58.214 37.500 0.00 0.00 38.98 2.12
402 403 0.326595 TGGCCAATGTACATGACGGT 59.673 50.000 9.63 0.00 0.00 4.83
403 404 1.458398 TTGGCCAATGTACATGACGG 58.542 50.000 16.05 11.53 0.00 4.79
404 405 3.876914 AGTATTGGCCAATGTACATGACG 59.123 43.478 36.21 1.17 32.50 4.35
405 406 5.835113 AAGTATTGGCCAATGTACATGAC 57.165 39.130 36.21 24.92 32.50 3.06
406 407 8.532186 AATAAAGTATTGGCCAATGTACATGA 57.468 30.769 36.21 16.96 32.50 3.07
407 408 9.033481 CAAATAAAGTATTGGCCAATGTACATG 57.967 33.333 36.21 20.88 32.50 3.21
408 409 7.710475 GCAAATAAAGTATTGGCCAATGTACAT 59.290 33.333 36.21 20.05 38.82 2.29
409 410 7.038659 GCAAATAAAGTATTGGCCAATGTACA 58.961 34.615 36.21 17.28 38.82 2.90
410 411 6.198216 CGCAAATAAAGTATTGGCCAATGTAC 59.802 38.462 36.21 27.58 41.13 2.90
415 416 4.021894 ACACGCAAATAAAGTATTGGCCAA 60.022 37.500 23.00 23.00 41.13 4.52
451 452 4.035091 TCGATGTATGCATTGGCTTTGTAC 59.965 41.667 3.54 0.00 41.91 2.90
452 453 4.195416 TCGATGTATGCATTGGCTTTGTA 58.805 39.130 3.54 0.00 41.91 2.41
464 465 4.692625 AGCAGGTTATCAATCGATGTATGC 59.307 41.667 0.00 1.83 32.73 3.14
465 466 7.063898 CCTTAGCAGGTTATCAATCGATGTATG 59.936 40.741 0.00 0.00 35.06 2.39
466 467 7.039011 TCCTTAGCAGGTTATCAATCGATGTAT 60.039 37.037 0.00 0.00 41.69 2.29
467 468 6.266786 TCCTTAGCAGGTTATCAATCGATGTA 59.733 38.462 0.00 0.00 41.69 2.29
468 469 5.070446 TCCTTAGCAGGTTATCAATCGATGT 59.930 40.000 0.00 0.00 41.69 3.06
469 470 5.541845 TCCTTAGCAGGTTATCAATCGATG 58.458 41.667 0.00 0.00 41.69 3.84
470 471 5.540337 TCTCCTTAGCAGGTTATCAATCGAT 59.460 40.000 0.00 0.00 41.69 3.59
471 472 4.893524 TCTCCTTAGCAGGTTATCAATCGA 59.106 41.667 0.00 0.00 41.69 3.59
472 473 5.201713 TCTCCTTAGCAGGTTATCAATCG 57.798 43.478 0.00 0.00 41.69 3.34
503 504 9.268282 TGAGGAAATAGTAAGGTTTCTGATAGT 57.732 33.333 0.00 0.00 35.29 2.12
521 523 2.029918 GTCGCTTTGGCTTTGAGGAAAT 60.030 45.455 0.00 0.00 36.09 2.17
526 528 0.662619 TGTGTCGCTTTGGCTTTGAG 59.337 50.000 0.00 0.00 36.09 3.02
544 546 2.949451 ATAGTGGAAGCGTCTGAGTG 57.051 50.000 0.00 0.00 0.00 3.51
546 548 2.612672 TCGTATAGTGGAAGCGTCTGAG 59.387 50.000 0.00 0.00 0.00 3.35
556 558 9.590451 CATACCTAAAAAGTTTCGTATAGTGGA 57.410 33.333 0.00 0.00 0.00 4.02
567 569 6.072119 GCCACTACTGCATACCTAAAAAGTTT 60.072 38.462 0.00 0.00 0.00 2.66
592 594 6.210796 CAAGATGTGTTGCCAATATGTATGG 58.789 40.000 0.00 0.00 41.08 2.74
611 619 3.555586 GCCCAATGTGTTTTCAGCAAGAT 60.556 43.478 0.00 0.00 0.00 2.40
615 623 0.031857 CGCCCAATGTGTTTTCAGCA 59.968 50.000 0.00 0.00 0.00 4.41
617 625 0.667184 GGCGCCCAATGTGTTTTCAG 60.667 55.000 18.11 0.00 0.00 3.02
632 640 1.804151 TCTGTGTGTTCTAAATGGCGC 59.196 47.619 0.00 0.00 0.00 6.53
641 649 2.009774 GTGCAACAGTCTGTGTGTTCT 58.990 47.619 6.18 0.00 40.26 3.01
643 651 1.094785 GGTGCAACAGTCTGTGTGTT 58.905 50.000 6.18 0.00 40.26 3.32
644 652 1.089481 CGGTGCAACAGTCTGTGTGT 61.089 55.000 6.18 0.00 40.26 3.72
645 653 0.809636 TCGGTGCAACAGTCTGTGTG 60.810 55.000 6.18 8.30 40.26 3.82
648 656 1.745232 TTTTCGGTGCAACAGTCTGT 58.255 45.000 0.98 0.00 39.98 3.41
649 657 2.290367 TCATTTTCGGTGCAACAGTCTG 59.710 45.455 0.98 0.00 39.98 3.51
651 659 2.350772 CCTCATTTTCGGTGCAACAGTC 60.351 50.000 0.98 0.00 39.98 3.51
652 660 1.608590 CCTCATTTTCGGTGCAACAGT 59.391 47.619 0.98 0.00 39.98 3.55
653 661 1.608590 ACCTCATTTTCGGTGCAACAG 59.391 47.619 0.98 0.00 39.98 3.16
654 662 1.336440 CACCTCATTTTCGGTGCAACA 59.664 47.619 0.98 0.00 43.59 3.33
661 684 7.012327 TGAGATAATTAAGCACCTCATTTTCGG 59.988 37.037 0.00 0.00 0.00 4.30
662 685 7.919690 TGAGATAATTAAGCACCTCATTTTCG 58.080 34.615 0.00 0.00 0.00 3.46
687 710 5.854431 ACGAAAATGTTGTTTTTGTGCTT 57.146 30.435 5.57 0.00 35.37 3.91
688 711 5.854431 AACGAAAATGTTGTTTTTGTGCT 57.146 30.435 6.85 0.00 36.45 4.40
689 712 6.074005 TCAAACGAAAATGTTGTTTTTGTGC 58.926 32.000 6.85 0.00 36.45 4.57
690 713 8.652592 ATTCAAACGAAAATGTTGTTTTTGTG 57.347 26.923 6.85 0.00 36.45 3.33
703 726 9.994432 AAAAATTGCACATTATTCAAACGAAAA 57.006 22.222 0.00 0.00 0.00 2.29
740 763 5.071370 TCCCGCAAAGAATGGTAAAAACTA 58.929 37.500 0.00 0.00 0.00 2.24
742 765 4.245845 TCCCGCAAAGAATGGTAAAAAC 57.754 40.909 0.00 0.00 0.00 2.43
745 768 4.939052 TTTTCCCGCAAAGAATGGTAAA 57.061 36.364 0.00 0.00 0.00 2.01
749 772 3.385193 AGTTTTTCCCGCAAAGAATGG 57.615 42.857 0.00 0.00 0.00 3.16
750 773 4.085107 CGAAAGTTTTTCCCGCAAAGAATG 60.085 41.667 0.00 0.00 0.00 2.67
753 776 2.683867 TCGAAAGTTTTTCCCGCAAAGA 59.316 40.909 0.00 0.00 0.00 2.52
754 777 3.073144 TCGAAAGTTTTTCCCGCAAAG 57.927 42.857 0.00 0.00 0.00 2.77
759 782 6.417191 TGAATAGATCGAAAGTTTTTCCCG 57.583 37.500 0.00 0.00 0.00 5.14
760 783 9.290483 GAAATGAATAGATCGAAAGTTTTTCCC 57.710 33.333 0.00 0.00 0.00 3.97
769 792 9.002600 CCATGGTATGAAATGAATAGATCGAAA 57.997 33.333 2.57 0.00 0.00 3.46
773 796 7.392673 AGTGCCATGGTATGAAATGAATAGATC 59.607 37.037 14.67 0.00 0.00 2.75
785 809 4.835284 TCTTTGTAGTGCCATGGTATGA 57.165 40.909 14.67 0.00 0.00 2.15
790 814 2.095768 CGTGTTCTTTGTAGTGCCATGG 60.096 50.000 7.63 7.63 0.00 3.66
795 819 3.802685 ACTTCTCGTGTTCTTTGTAGTGC 59.197 43.478 0.00 0.00 0.00 4.40
798 822 7.459394 TTGTTACTTCTCGTGTTCTTTGTAG 57.541 36.000 0.00 0.00 0.00 2.74
860 884 5.175127 TCAATGCTTGCAGTCGTTATTAGA 58.825 37.500 0.87 0.00 0.00 2.10
903 927 4.142315 CGACTATTTTCTTAGGTCGTCCCA 60.142 45.833 0.00 0.00 34.66 4.37
960 993 7.082700 TGTGCGCTTAATTTGAAGATCATTA 57.917 32.000 9.73 0.00 0.00 1.90
978 1011 3.435105 TTTTGGGAATATGATGTGCGC 57.565 42.857 0.00 0.00 0.00 6.09
1000 1037 8.743714 TGTGCATATGATGTGTGGTTTTTATTA 58.256 29.630 6.97 0.00 0.00 0.98
1040 1077 4.979943 TCAAACAAGACATTTGTGCTGA 57.020 36.364 0.00 0.00 38.08 4.26
1050 1087 7.227711 TCCAAAATCGAGTATTCAAACAAGACA 59.772 33.333 0.00 0.00 0.00 3.41
1103 2171 0.471617 CTTCCCATGGCCAGGTCTAG 59.528 60.000 17.55 6.09 0.00 2.43
1104 2172 1.635817 GCTTCCCATGGCCAGGTCTA 61.636 60.000 17.55 0.00 0.00 2.59
1105 2173 2.988839 GCTTCCCATGGCCAGGTCT 61.989 63.158 17.55 0.00 0.00 3.85
1106 2174 2.440980 GCTTCCCATGGCCAGGTC 60.441 66.667 17.55 1.30 0.00 3.85
1107 2175 4.066139 GGCTTCCCATGGCCAGGT 62.066 66.667 17.55 0.00 46.84 4.00
1127 2195 2.636412 GGACTTTTTCGGGCCAGGC 61.636 63.158 4.39 1.26 0.00 4.85
1128 2196 2.332654 CGGACTTTTTCGGGCCAGG 61.333 63.158 4.39 0.00 0.00 4.45
1129 2197 1.302192 TCGGACTTTTTCGGGCCAG 60.302 57.895 4.39 0.00 0.00 4.85
1130 2198 1.598685 GTCGGACTTTTTCGGGCCA 60.599 57.895 4.39 0.00 0.00 5.36
1131 2199 1.296755 GAGTCGGACTTTTTCGGGCC 61.297 60.000 12.67 0.00 29.37 5.80
1132 2200 1.623973 CGAGTCGGACTTTTTCGGGC 61.624 60.000 12.67 0.00 0.00 6.13
1133 2201 2.442084 CGAGTCGGACTTTTTCGGG 58.558 57.895 12.67 0.00 0.00 5.14
1180 2248 1.404851 GCTCATAATCTAGGCCCGAGC 60.405 57.143 0.00 0.55 37.81 5.03
1181 2249 1.205893 GGCTCATAATCTAGGCCCGAG 59.794 57.143 0.00 0.00 37.12 4.63
1182 2250 1.267121 GGCTCATAATCTAGGCCCGA 58.733 55.000 0.00 0.00 37.12 5.14
1183 2251 3.842869 GGCTCATAATCTAGGCCCG 57.157 57.895 0.00 0.00 37.12 6.13
1186 2254 2.354203 CCTTCGGGCTCATAATCTAGGC 60.354 54.545 0.00 0.00 37.55 3.93
1187 2255 3.601443 CCTTCGGGCTCATAATCTAGG 57.399 52.381 0.00 0.00 0.00 3.02
1217 2285 3.308512 AAAAATGATGGGCCCGGC 58.691 55.556 19.37 12.43 0.00 6.13
1232 2300 4.518970 CCCGACCTTCAGAGAAATGAAAAA 59.481 41.667 0.00 0.00 38.66 1.94
1233 2301 4.072131 CCCGACCTTCAGAGAAATGAAAA 58.928 43.478 0.00 0.00 38.66 2.29
1234 2302 3.674997 CCCGACCTTCAGAGAAATGAAA 58.325 45.455 0.00 0.00 38.66 2.69
1235 2303 2.615493 GCCCGACCTTCAGAGAAATGAA 60.615 50.000 0.00 0.00 37.60 2.57
1236 2304 1.066143 GCCCGACCTTCAGAGAAATGA 60.066 52.381 0.00 0.00 0.00 2.57
1237 2305 1.373570 GCCCGACCTTCAGAGAAATG 58.626 55.000 0.00 0.00 0.00 2.32
1238 2306 0.253327 GGCCCGACCTTCAGAGAAAT 59.747 55.000 0.00 0.00 34.51 2.17
1239 2307 1.677552 GGCCCGACCTTCAGAGAAA 59.322 57.895 0.00 0.00 34.51 2.52
1240 2308 2.646175 CGGCCCGACCTTCAGAGAA 61.646 63.158 0.00 0.00 35.61 2.87
1241 2309 3.068691 CGGCCCGACCTTCAGAGA 61.069 66.667 0.00 0.00 35.61 3.10
1242 2310 4.148825 CCGGCCCGACCTTCAGAG 62.149 72.222 3.71 0.00 35.61 3.35
1273 2341 1.223417 AACACGTAAAAGCCCGTCGG 61.223 55.000 3.60 3.60 34.59 4.79
1274 2342 0.162294 GAACACGTAAAAGCCCGTCG 59.838 55.000 0.00 0.00 34.59 5.12
1275 2343 0.162294 CGAACACGTAAAAGCCCGTC 59.838 55.000 0.00 0.00 34.59 4.79
1276 2344 1.223417 CCGAACACGTAAAAGCCCGT 61.223 55.000 0.00 0.00 37.90 5.28
1277 2345 1.494189 CCGAACACGTAAAAGCCCG 59.506 57.895 0.00 0.00 0.00 6.13
1278 2346 1.871077 CCCGAACACGTAAAAGCCC 59.129 57.895 0.00 0.00 0.00 5.19
1279 2347 1.208358 GCCCGAACACGTAAAAGCC 59.792 57.895 0.00 0.00 0.00 4.35
1280 2348 1.208358 GGCCCGAACACGTAAAAGC 59.792 57.895 0.00 0.00 0.00 3.51
1281 2349 0.885596 TGGGCCCGAACACGTAAAAG 60.886 55.000 19.37 0.00 0.00 2.27
1282 2350 0.885596 CTGGGCCCGAACACGTAAAA 60.886 55.000 19.37 0.00 0.00 1.52
1283 2351 1.301874 CTGGGCCCGAACACGTAAA 60.302 57.895 19.37 0.00 0.00 2.01
1284 2352 1.756408 TTCTGGGCCCGAACACGTAA 61.756 55.000 19.37 0.00 0.00 3.18
1285 2353 1.756408 TTTCTGGGCCCGAACACGTA 61.756 55.000 23.23 10.04 0.00 3.57
1286 2354 2.612095 TTTTCTGGGCCCGAACACGT 62.612 55.000 23.23 0.00 0.00 4.49
1287 2355 1.894756 TTTTCTGGGCCCGAACACG 60.895 57.895 23.23 6.61 0.00 4.49
1288 2356 1.104577 TGTTTTCTGGGCCCGAACAC 61.105 55.000 25.77 25.77 0.00 3.32
1289 2357 0.821711 CTGTTTTCTGGGCCCGAACA 60.822 55.000 23.23 23.22 0.00 3.18
1290 2358 1.524008 CCTGTTTTCTGGGCCCGAAC 61.524 60.000 23.23 20.58 35.62 3.95
1291 2359 1.228429 CCTGTTTTCTGGGCCCGAA 60.228 57.895 19.37 20.16 35.62 4.30
1292 2360 2.434331 CCTGTTTTCTGGGCCCGA 59.566 61.111 19.37 14.97 35.62 5.14
1293 2361 3.373565 GCCTGTTTTCTGGGCCCG 61.374 66.667 19.37 12.57 39.96 6.13
1297 2365 1.000896 ATCGGGCCTGTTTTCTGGG 60.001 57.895 12.43 0.00 39.00 4.45
1298 2366 1.315257 CCATCGGGCCTGTTTTCTGG 61.315 60.000 12.43 8.29 41.11 3.86
1299 2367 0.609131 ACCATCGGGCCTGTTTTCTG 60.609 55.000 12.43 2.96 37.90 3.02
1300 2368 0.322546 GACCATCGGGCCTGTTTTCT 60.323 55.000 12.43 0.00 37.90 2.52
1301 2369 1.644786 CGACCATCGGGCCTGTTTTC 61.645 60.000 12.43 3.46 36.00 2.29
1302 2370 1.674322 CGACCATCGGGCCTGTTTT 60.674 57.895 12.43 0.00 36.00 2.43
1303 2371 2.046314 CGACCATCGGGCCTGTTT 60.046 61.111 12.43 0.00 36.00 2.83
1348 2416 2.091541 CTAGCCAAGCCCGATGAAAAA 58.908 47.619 0.00 0.00 0.00 1.94
1349 2417 1.681780 CCTAGCCAAGCCCGATGAAAA 60.682 52.381 0.00 0.00 0.00 2.29
1350 2418 0.107214 CCTAGCCAAGCCCGATGAAA 60.107 55.000 0.00 0.00 0.00 2.69
1351 2419 1.526887 CCTAGCCAAGCCCGATGAA 59.473 57.895 0.00 0.00 0.00 2.57
1352 2420 3.106986 GCCTAGCCAAGCCCGATGA 62.107 63.158 0.00 0.00 0.00 2.92
1353 2421 2.592861 GCCTAGCCAAGCCCGATG 60.593 66.667 0.00 0.00 0.00 3.84
1375 2443 0.836400 ATACCTGGCCATACCTCGGG 60.836 60.000 5.51 4.26 40.22 5.14
1376 2444 1.933021 TATACCTGGCCATACCTCGG 58.067 55.000 5.51 5.16 40.22 4.63
1377 2445 4.020573 TGAATTATACCTGGCCATACCTCG 60.021 45.833 5.51 0.00 40.22 4.63
1378 2446 5.246307 GTGAATTATACCTGGCCATACCTC 58.754 45.833 5.51 0.00 40.22 3.85
1379 2447 4.262894 CGTGAATTATACCTGGCCATACCT 60.263 45.833 5.51 0.00 40.22 3.08
1380 2448 4.000988 CGTGAATTATACCTGGCCATACC 58.999 47.826 5.51 0.00 39.84 2.73
1381 2449 3.435671 GCGTGAATTATACCTGGCCATAC 59.564 47.826 5.51 0.00 0.00 2.39
1382 2450 3.558321 GGCGTGAATTATACCTGGCCATA 60.558 47.826 5.51 0.00 39.10 2.74
1383 2451 2.504367 GCGTGAATTATACCTGGCCAT 58.496 47.619 5.51 0.00 0.00 4.40
1384 2452 1.476110 GGCGTGAATTATACCTGGCCA 60.476 52.381 4.71 4.71 39.10 5.36
1385 2453 1.235724 GGCGTGAATTATACCTGGCC 58.764 55.000 0.00 0.00 0.00 5.36
1386 2454 1.961793 TGGCGTGAATTATACCTGGC 58.038 50.000 0.00 0.00 0.00 4.85
1387 2455 2.616842 GGTTGGCGTGAATTATACCTGG 59.383 50.000 0.00 0.00 0.00 4.45
1388 2456 3.541632 AGGTTGGCGTGAATTATACCTG 58.458 45.455 0.00 0.00 33.50 4.00
1389 2457 3.199071 TGAGGTTGGCGTGAATTATACCT 59.801 43.478 0.00 0.00 37.24 3.08
1390 2458 3.537580 TGAGGTTGGCGTGAATTATACC 58.462 45.455 0.00 0.00 0.00 2.73
1391 2459 4.084537 CGATGAGGTTGGCGTGAATTATAC 60.085 45.833 0.00 0.00 0.00 1.47
1392 2460 4.055360 CGATGAGGTTGGCGTGAATTATA 58.945 43.478 0.00 0.00 0.00 0.98
1396 2464 0.249120 TCGATGAGGTTGGCGTGAAT 59.751 50.000 0.00 0.00 0.00 2.57
1445 2520 0.387367 CTCGACGTGGTGAAGTGGAG 60.387 60.000 0.00 0.00 37.00 3.86
1459 2534 4.998033 AGGGAGATGAAAAAGAAACTCGAC 59.002 41.667 0.00 0.00 0.00 4.20
1464 2539 5.648526 GGTAGGAGGGAGATGAAAAAGAAAC 59.351 44.000 0.00 0.00 0.00 2.78
1468 2543 6.556874 AGATAGGTAGGAGGGAGATGAAAAAG 59.443 42.308 0.00 0.00 0.00 2.27
1490 2565 4.335400 AATTGTTTGGTTTTGGCGAGAT 57.665 36.364 0.00 0.00 0.00 2.75
1493 2568 3.385111 AGGTAATTGTTTGGTTTTGGCGA 59.615 39.130 0.00 0.00 0.00 5.54
1606 2690 2.356553 CGGTGGAAAGCGAACGGA 60.357 61.111 0.00 0.00 0.00 4.69
1608 2692 2.664436 GGACGGTGGAAAGCGAACG 61.664 63.158 4.15 0.00 38.99 3.95
1609 2693 2.322830 GGGACGGTGGAAAGCGAAC 61.323 63.158 4.15 0.00 0.00 3.95
1610 2694 2.031465 GGGACGGTGGAAAGCGAA 59.969 61.111 4.15 0.00 0.00 4.70
1635 2725 4.776322 CCGGCCGGTGATGAGCAA 62.776 66.667 36.64 0.00 0.00 3.91
1694 2784 2.579787 CGGCAGCGTCGAGGTAAG 60.580 66.667 7.01 0.00 29.41 2.34
1716 3146 4.459337 GGGATTCGATTTTCACTTTCACCT 59.541 41.667 0.00 0.00 0.00 4.00
1731 3161 2.831742 CCTCGTCGGGGGATTCGA 60.832 66.667 2.09 0.00 0.00 3.71
1754 3184 0.033208 TGGAATGGCCCCATCTTCAC 60.033 55.000 0.00 0.00 35.31 3.18
1772 3202 2.716244 CTCGTCGGAGTCGGGATG 59.284 66.667 0.00 0.00 43.30 3.51
1775 3205 3.812019 CACCTCGTCGGAGTCGGG 61.812 72.222 0.00 0.00 39.67 5.14
1796 3226 2.990479 GTGGGCCTCGACCTTCAT 59.010 61.111 4.53 0.00 0.00 2.57
1818 3248 1.036707 CTCCCTCTTGACCTCGATCC 58.963 60.000 0.00 0.00 0.00 3.36
1820 3250 1.388065 CGCTCCCTCTTGACCTCGAT 61.388 60.000 0.00 0.00 0.00 3.59
1893 3323 1.945394 CATCGATTGGCTCCCTCTTTG 59.055 52.381 0.00 0.00 0.00 2.77
2104 3537 3.075148 CACCTCGTCTTCACTAGAGTCA 58.925 50.000 0.00 0.00 32.23 3.41
2173 3606 1.073964 TGAAGACTACGTCGTCCTCG 58.926 55.000 15.87 0.00 39.58 4.63
2176 3609 1.662629 TCGATGAAGACTACGTCGTCC 59.337 52.381 15.87 3.41 44.02 4.79
2383 3824 1.738099 CTTCCTCCCGCGACAAGTG 60.738 63.158 8.23 0.00 0.00 3.16
2465 3906 4.063967 CACCGCCTGCCTGTACGA 62.064 66.667 0.00 0.00 0.00 3.43
2537 3978 5.048504 TGAATTAGAAGCAAAAGCAGAGTGG 60.049 40.000 0.00 0.00 0.00 4.00
2559 4000 9.312904 TCCTGAACAGATATGATGTATATGTGA 57.687 33.333 10.00 0.00 42.64 3.58
2781 4225 3.931578 AGTAGCAACCATGTTCAGAGAC 58.068 45.455 0.00 0.00 0.00 3.36
2806 4251 8.732746 AATTTAGCGTCAATAAGTACAGGAAT 57.267 30.769 0.00 0.00 0.00 3.01
2834 4279 4.209452 TGTAGAAGCTGCGAAACAAAAG 57.791 40.909 0.00 0.00 0.00 2.27
2950 4395 1.079503 GGTTTCAGGCTTCAGCTACG 58.920 55.000 0.00 0.00 41.70 3.51
2979 4521 3.110178 GACCCAAACGCCTCGTCG 61.110 66.667 0.00 0.00 39.99 5.12
3027 4579 0.377554 ACGAGATCTTGACGCTACCG 59.622 55.000 17.27 5.09 41.14 4.02
3038 4590 6.068010 AGATCCTGACATTCTAACGAGATCT 58.932 40.000 0.00 0.00 34.57 2.75
3156 4708 2.283532 CCCCGGCATCCACCAAAA 60.284 61.111 0.00 0.00 0.00 2.44
3301 4853 2.283529 ATGGACCGAGCCGACAACT 61.284 57.895 0.00 0.00 0.00 3.16
3321 7628 3.469863 GACTGTCCACGTTGGGGCA 62.470 63.158 0.00 0.00 41.07 5.36
3331 7638 1.165907 ACGTACCGTTCGACTGTCCA 61.166 55.000 4.43 0.00 36.35 4.02
3336 7643 2.680913 CCCGACGTACCGTTCGACT 61.681 63.158 4.43 0.00 41.37 4.18
3389 7696 2.092699 TCCACAGGACAATCACACACAA 60.093 45.455 0.00 0.00 0.00 3.33
3398 7705 1.271054 GCTCACACTCCACAGGACAAT 60.271 52.381 0.00 0.00 0.00 2.71
3423 7730 1.238439 CACCGAACAAACTGGATGCT 58.762 50.000 0.00 0.00 0.00 3.79
3493 7800 0.179187 CAAACCACAAACGTCGCACA 60.179 50.000 0.00 0.00 0.00 4.57
3583 7890 2.994995 TCGTCCCGACATGCCACT 60.995 61.111 0.00 0.00 0.00 4.00
3629 7936 4.712476 GACTTCCAATCACCATGCTCTAT 58.288 43.478 0.00 0.00 0.00 1.98
3630 7937 3.430790 CGACTTCCAATCACCATGCTCTA 60.431 47.826 0.00 0.00 0.00 2.43
3633 7940 1.679944 CCGACTTCCAATCACCATGCT 60.680 52.381 0.00 0.00 0.00 3.79
3668 7975 1.709147 CTCTCAAGGCCGCCGAAATG 61.709 60.000 3.05 2.60 0.00 2.32
3724 8031 2.296752 CTCAATGCCAACACCAACATCA 59.703 45.455 0.00 0.00 0.00 3.07
3749 8056 1.131126 CGTCACCATCTTTGCCACATC 59.869 52.381 0.00 0.00 0.00 3.06
3768 8075 2.037913 CTACGTCTCCGACAGCTCCG 62.038 65.000 0.00 0.00 37.88 4.63
3805 8112 5.822519 CCCATAAAAACATCGGAGAAGATCA 59.177 40.000 0.00 0.00 43.58 2.92
3840 8147 3.440872 ACTTCACAACGTTAGCAAACCAA 59.559 39.130 0.00 0.00 31.46 3.67
3851 8158 5.628193 CACTATAGTTTCGACTTCACAACGT 59.372 40.000 1.56 0.00 0.00 3.99
3852 8159 5.060569 CCACTATAGTTTCGACTTCACAACG 59.939 44.000 1.56 0.00 0.00 4.10
3854 8161 4.927425 GCCACTATAGTTTCGACTTCACAA 59.073 41.667 1.56 0.00 0.00 3.33
3884 8191 1.068588 GCCTGTCATCGTATGCCACTA 59.931 52.381 0.00 0.00 0.00 2.74
3926 8233 2.233676 TCTAGCGCCACAGAAGATCAAA 59.766 45.455 2.29 0.00 0.00 2.69
3927 8234 1.824852 TCTAGCGCCACAGAAGATCAA 59.175 47.619 2.29 0.00 0.00 2.57
3938 8245 1.666553 CCAAACACGTCTAGCGCCA 60.667 57.895 2.29 0.00 46.11 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.