Multiple sequence alignment - TraesCS3B01G159300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G159300 chr3B 100.000 2813 0 0 1 2813 154426821 154424009 0.000000e+00 5195
1 TraesCS3B01G159300 chr3B 95.849 265 7 3 2544 2806 204204933 204205195 2.590000e-115 425
2 TraesCS3B01G159300 chr3B 87.467 375 33 12 1 373 143254772 143254410 1.200000e-113 420
3 TraesCS3B01G159300 chr3B 94.776 268 10 2 2548 2813 10053130 10052865 5.610000e-112 414
4 TraesCS3B01G159300 chr3B 92.937 269 9 5 2545 2806 151118099 151117834 1.580000e-102 383
5 TraesCS3B01G159300 chr3D 88.860 1517 102 30 904 2395 103673347 103671873 0.000000e+00 1803
6 TraesCS3B01G159300 chr3D 87.654 1628 101 40 649 2240 103779347 103777784 0.000000e+00 1801
7 TraesCS3B01G159300 chr3D 94.052 269 6 3 2545 2813 418385366 418385108 1.570000e-107 399
8 TraesCS3B01G159300 chr3D 86.429 280 36 2 1580 1859 103810317 103810040 3.520000e-79 305
9 TraesCS3B01G159300 chr3D 89.423 208 20 2 644 851 103675707 103675502 7.730000e-66 261
10 TraesCS3B01G159300 chr3D 83.395 271 33 7 974 1244 103810590 103810332 1.010000e-59 241
11 TraesCS3B01G159300 chr3D 92.593 162 11 1 2385 2546 103671686 103671526 6.060000e-57 231
12 TraesCS3B01G159300 chr3D 88.953 172 18 1 374 545 103779814 103779644 7.890000e-51 211
13 TraesCS3B01G159300 chr3A 91.294 1206 81 12 649 1848 552558089 552559276 0.000000e+00 1624
14 TraesCS3B01G159300 chr3A 89.144 479 49 2 1381 1859 552536780 552537255 6.710000e-166 593
15 TraesCS3B01G159300 chr6D 90.716 377 26 8 1 375 55937702 55938071 7.000000e-136 494
16 TraesCS3B01G159300 chr6D 89.125 377 30 7 1 373 329442428 329442059 2.550000e-125 459
17 TraesCS3B01G159300 chr4D 89.390 377 32 7 1 373 16536878 16537250 4.240000e-128 468
18 TraesCS3B01G159300 chr4D 87.566 378 35 9 1 374 15434395 15434026 7.200000e-116 427
19 TraesCS3B01G159300 chr7B 88.298 376 32 9 1 371 525688184 525688552 9.250000e-120 440
20 TraesCS3B01G159300 chr7B 94.815 270 7 4 2546 2813 671266629 671266365 5.610000e-112 414
21 TraesCS3B01G159300 chr1D 87.831 378 37 9 1 375 290451124 290450753 4.300000e-118 435
22 TraesCS3B01G159300 chr5B 95.522 268 10 2 2546 2813 75080137 75080402 7.200000e-116 427
23 TraesCS3B01G159300 chr5B 92.937 269 11 2 2545 2813 108857098 108857358 4.400000e-103 385
24 TraesCS3B01G159300 chr5A 87.500 376 36 8 1 373 649456854 649456487 9.320000e-115 424
25 TraesCS3B01G159300 chr4B 94.853 272 10 4 2546 2813 561751418 561751147 3.350000e-114 422
26 TraesCS3B01G159300 chr2B 87.234 376 37 9 1 373 152497909 152497542 4.330000e-113 418
27 TraesCS3B01G159300 chr2B 94.444 270 7 2 2546 2813 72932960 72933223 2.610000e-110 409


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G159300 chr3B 154424009 154426821 2812 True 5195 5195 100.0000 1 2813 1 chr3B.!!$R4 2812
1 TraesCS3B01G159300 chr3D 103777784 103779814 2030 True 1006 1801 88.3035 374 2240 2 chr3D.!!$R3 1866
2 TraesCS3B01G159300 chr3D 103671526 103675707 4181 True 765 1803 90.2920 644 2546 3 chr3D.!!$R2 1902
3 TraesCS3B01G159300 chr3D 103810040 103810590 550 True 273 305 84.9120 974 1859 2 chr3D.!!$R4 885
4 TraesCS3B01G159300 chr3A 552558089 552559276 1187 False 1624 1624 91.2940 649 1848 1 chr3A.!!$F2 1199

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.256752 TGCCCAGACCTCCATGAATG 59.743 55.0 0.0 0.0 0.00 2.67 F
1313 3643 0.179094 GGCATCCGACACCGAACATA 60.179 55.0 0.0 0.0 38.22 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1317 3647 0.954452 GGGCGCAAAAGGAGGATATG 59.046 55.0 10.83 0.0 0.0 1.78 R
2705 5276 0.106217 GAGGGGGAGAGAGAGTGAGG 60.106 65.0 0.00 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 9.037737 ACATTGATACATTTTCTAATTGCATGC 57.962 29.630 11.82 11.82 0.00 4.06
93 94 9.036671 CATTGATACATTTTCTAATTGCATGCA 57.963 29.630 18.46 18.46 0.00 3.96
94 95 8.999220 TTGATACATTTTCTAATTGCATGCAA 57.001 26.923 33.57 33.57 40.47 4.08
95 96 8.999220 TGATACATTTTCTAATTGCATGCAAA 57.001 26.923 34.84 19.79 39.55 3.68
96 97 9.433153 TGATACATTTTCTAATTGCATGCAAAA 57.567 25.926 34.84 23.48 39.55 2.44
100 101 9.615295 ACATTTTCTAATTGCATGCAAAATTTC 57.385 25.926 34.84 0.00 39.55 2.17
101 102 9.613957 CATTTTCTAATTGCATGCAAAATTTCA 57.386 25.926 34.84 17.43 39.55 2.69
102 103 9.834628 ATTTTCTAATTGCATGCAAAATTTCAG 57.165 25.926 34.84 22.80 39.55 3.02
103 104 6.971527 TCTAATTGCATGCAAAATTTCAGG 57.028 33.333 34.84 17.70 39.55 3.86
104 105 6.465948 TCTAATTGCATGCAAAATTTCAGGT 58.534 32.000 34.84 14.03 39.55 4.00
105 106 6.935771 TCTAATTGCATGCAAAATTTCAGGTT 59.064 30.769 34.84 22.62 39.55 3.50
106 107 4.815040 TTGCATGCAAAATTTCAGGTTG 57.185 36.364 30.19 0.00 32.44 3.77
107 108 4.069300 TGCATGCAAAATTTCAGGTTGA 57.931 36.364 20.30 0.00 0.00 3.18
108 109 4.449131 TGCATGCAAAATTTCAGGTTGAA 58.551 34.783 20.30 0.00 34.03 2.69
109 110 5.356190 TTGCATGCAAAATTTCAGGTTGAAA 59.644 32.000 30.19 1.28 40.44 2.69
110 111 7.255660 ATTGCATGCAAAATTTCAGGTTGAAAT 60.256 29.630 34.84 11.04 45.61 2.17
119 120 5.766150 TTTCAGGTTGAAATGACATTCGT 57.234 34.783 0.05 0.00 41.02 3.85
120 121 6.869315 TTTCAGGTTGAAATGACATTCGTA 57.131 33.333 0.05 0.00 41.02 3.43
121 122 6.480524 TTCAGGTTGAAATGACATTCGTAG 57.519 37.500 0.05 0.00 32.71 3.51
122 123 5.789521 TCAGGTTGAAATGACATTCGTAGA 58.210 37.500 0.05 0.00 31.80 2.59
123 124 5.869344 TCAGGTTGAAATGACATTCGTAGAG 59.131 40.000 0.05 0.00 38.43 2.43
124 125 5.063944 CAGGTTGAAATGACATTCGTAGAGG 59.936 44.000 0.05 0.00 38.43 3.69
125 126 4.935808 GGTTGAAATGACATTCGTAGAGGT 59.064 41.667 0.05 0.00 38.43 3.85
126 127 5.063564 GGTTGAAATGACATTCGTAGAGGTC 59.936 44.000 0.05 0.00 41.14 3.85
127 128 4.755411 TGAAATGACATTCGTAGAGGTCC 58.245 43.478 0.05 0.00 40.41 4.46
128 129 3.438297 AATGACATTCGTAGAGGTCCG 57.562 47.619 0.00 0.00 40.41 4.79
129 130 2.118313 TGACATTCGTAGAGGTCCGA 57.882 50.000 0.00 0.00 40.41 4.55
130 131 2.014857 TGACATTCGTAGAGGTCCGAG 58.985 52.381 0.00 0.00 40.41 4.63
131 132 2.286872 GACATTCGTAGAGGTCCGAGA 58.713 52.381 0.00 0.00 38.43 4.04
132 133 2.681848 GACATTCGTAGAGGTCCGAGAA 59.318 50.000 0.00 0.00 38.43 2.87
133 134 3.087031 ACATTCGTAGAGGTCCGAGAAA 58.913 45.455 0.00 0.00 38.43 2.52
134 135 3.508793 ACATTCGTAGAGGTCCGAGAAAA 59.491 43.478 0.00 0.00 38.43 2.29
135 136 4.021719 ACATTCGTAGAGGTCCGAGAAAAA 60.022 41.667 0.00 0.00 38.43 1.94
162 163 9.771534 AAATTTAAAATCGATGGTCCAAAAAGA 57.228 25.926 0.00 0.00 0.00 2.52
163 164 8.757164 ATTTAAAATCGATGGTCCAAAAAGAC 57.243 30.769 0.00 0.00 35.95 3.01
164 165 7.519032 TTAAAATCGATGGTCCAAAAAGACT 57.481 32.000 0.00 0.00 36.95 3.24
165 166 8.624367 TTAAAATCGATGGTCCAAAAAGACTA 57.376 30.769 0.00 0.00 36.95 2.59
166 167 7.703058 AAAATCGATGGTCCAAAAAGACTAT 57.297 32.000 0.00 0.00 40.29 2.12
167 168 7.703058 AAATCGATGGTCCAAAAAGACTATT 57.297 32.000 0.00 0.00 38.00 1.73
168 169 6.683974 ATCGATGGTCCAAAAAGACTATTG 57.316 37.500 0.00 0.00 38.00 1.90
169 170 5.556915 TCGATGGTCCAAAAAGACTATTGT 58.443 37.500 0.00 0.00 38.00 2.71
170 171 6.001460 TCGATGGTCCAAAAAGACTATTGTT 58.999 36.000 0.00 0.00 38.00 2.83
171 172 6.072728 TCGATGGTCCAAAAAGACTATTGTTG 60.073 38.462 0.00 0.00 38.00 3.33
172 173 5.782893 TGGTCCAAAAAGACTATTGTTGG 57.217 39.130 3.55 3.55 40.12 3.77
173 174 5.450453 TGGTCCAAAAAGACTATTGTTGGA 58.550 37.500 7.95 7.95 44.18 3.53
174 175 5.894393 TGGTCCAAAAAGACTATTGTTGGAA 59.106 36.000 12.66 0.00 46.92 3.53
175 176 6.040391 TGGTCCAAAAAGACTATTGTTGGAAG 59.960 38.462 12.66 0.00 46.92 3.46
176 177 5.920840 GTCCAAAAAGACTATTGTTGGAAGC 59.079 40.000 12.66 0.44 46.92 3.86
177 178 5.596361 TCCAAAAAGACTATTGTTGGAAGCA 59.404 36.000 9.33 0.00 43.60 3.91
178 179 6.267471 TCCAAAAAGACTATTGTTGGAAGCAT 59.733 34.615 9.33 0.00 43.60 3.79
179 180 6.930722 CCAAAAAGACTATTGTTGGAAGCATT 59.069 34.615 3.85 0.00 41.05 3.56
180 181 7.442062 CCAAAAAGACTATTGTTGGAAGCATTT 59.558 33.333 3.85 0.00 41.05 2.32
181 182 8.829612 CAAAAAGACTATTGTTGGAAGCATTTT 58.170 29.630 0.00 0.00 0.00 1.82
182 183 7.951530 AAAGACTATTGTTGGAAGCATTTTG 57.048 32.000 0.00 0.00 0.00 2.44
183 184 6.029346 AGACTATTGTTGGAAGCATTTTGG 57.971 37.500 0.00 0.00 0.00 3.28
184 185 5.774690 AGACTATTGTTGGAAGCATTTTGGA 59.225 36.000 0.00 0.00 0.00 3.53
185 186 6.029346 ACTATTGTTGGAAGCATTTTGGAG 57.971 37.500 0.00 0.00 0.00 3.86
186 187 2.818130 TGTTGGAAGCATTTTGGAGC 57.182 45.000 0.00 0.00 0.00 4.70
187 188 2.037901 TGTTGGAAGCATTTTGGAGCA 58.962 42.857 0.00 0.00 0.00 4.26
188 189 2.633967 TGTTGGAAGCATTTTGGAGCAT 59.366 40.909 0.00 0.00 0.00 3.79
189 190 3.256558 GTTGGAAGCATTTTGGAGCATC 58.743 45.455 0.00 0.00 0.00 3.91
190 191 2.527497 TGGAAGCATTTTGGAGCATCA 58.473 42.857 0.00 0.00 36.25 3.07
191 192 2.898612 TGGAAGCATTTTGGAGCATCAA 59.101 40.909 0.00 0.00 36.25 2.57
192 193 3.516300 TGGAAGCATTTTGGAGCATCAAT 59.484 39.130 0.00 0.00 36.25 2.57
193 194 4.020039 TGGAAGCATTTTGGAGCATCAATT 60.020 37.500 0.00 0.00 36.25 2.32
194 195 4.939439 GGAAGCATTTTGGAGCATCAATTT 59.061 37.500 0.00 0.00 36.25 1.82
195 196 5.413523 GGAAGCATTTTGGAGCATCAATTTT 59.586 36.000 0.00 0.00 36.25 1.82
196 197 5.873179 AGCATTTTGGAGCATCAATTTTG 57.127 34.783 0.00 0.00 36.25 2.44
197 198 5.310451 AGCATTTTGGAGCATCAATTTTGT 58.690 33.333 0.00 0.00 36.25 2.83
198 199 5.766174 AGCATTTTGGAGCATCAATTTTGTT 59.234 32.000 0.00 0.00 36.25 2.83
199 200 6.935771 AGCATTTTGGAGCATCAATTTTGTTA 59.064 30.769 0.00 0.00 36.25 2.41
200 201 7.608761 AGCATTTTGGAGCATCAATTTTGTTAT 59.391 29.630 0.00 0.00 36.25 1.89
201 202 8.238631 GCATTTTGGAGCATCAATTTTGTTATT 58.761 29.630 0.00 0.00 36.25 1.40
205 206 9.947669 TTTGGAGCATCAATTTTGTTATTTTTG 57.052 25.926 0.00 0.00 36.25 2.44
206 207 7.583230 TGGAGCATCAATTTTGTTATTTTTGC 58.417 30.769 0.00 0.00 36.25 3.68
207 208 7.022979 GGAGCATCAATTTTGTTATTTTTGCC 58.977 34.615 0.00 0.00 36.25 4.52
208 209 6.912082 AGCATCAATTTTGTTATTTTTGCCC 58.088 32.000 0.00 0.00 0.00 5.36
209 210 6.489361 AGCATCAATTTTGTTATTTTTGCCCA 59.511 30.769 0.00 0.00 0.00 5.36
210 211 6.802834 GCATCAATTTTGTTATTTTTGCCCAG 59.197 34.615 0.00 0.00 0.00 4.45
211 212 7.308469 GCATCAATTTTGTTATTTTTGCCCAGA 60.308 33.333 0.00 0.00 0.00 3.86
212 213 7.489574 TCAATTTTGTTATTTTTGCCCAGAC 57.510 32.000 0.00 0.00 0.00 3.51
213 214 6.484977 TCAATTTTGTTATTTTTGCCCAGACC 59.515 34.615 0.00 0.00 0.00 3.85
214 215 5.622346 TTTTGTTATTTTTGCCCAGACCT 57.378 34.783 0.00 0.00 0.00 3.85
215 216 4.864704 TTGTTATTTTTGCCCAGACCTC 57.135 40.909 0.00 0.00 0.00 3.85
216 217 3.161866 TGTTATTTTTGCCCAGACCTCC 58.838 45.455 0.00 0.00 0.00 4.30
217 218 3.161866 GTTATTTTTGCCCAGACCTCCA 58.838 45.455 0.00 0.00 0.00 3.86
218 219 2.629017 ATTTTTGCCCAGACCTCCAT 57.371 45.000 0.00 0.00 0.00 3.41
219 220 1.631405 TTTTTGCCCAGACCTCCATG 58.369 50.000 0.00 0.00 0.00 3.66
220 221 0.776810 TTTTGCCCAGACCTCCATGA 59.223 50.000 0.00 0.00 0.00 3.07
221 222 0.776810 TTTGCCCAGACCTCCATGAA 59.223 50.000 0.00 0.00 0.00 2.57
222 223 1.002069 TTGCCCAGACCTCCATGAAT 58.998 50.000 0.00 0.00 0.00 2.57
223 224 0.256752 TGCCCAGACCTCCATGAATG 59.743 55.000 0.00 0.00 0.00 2.67
224 225 0.257039 GCCCAGACCTCCATGAATGT 59.743 55.000 0.00 0.00 0.00 2.71
225 226 1.748591 GCCCAGACCTCCATGAATGTC 60.749 57.143 0.00 0.00 0.00 3.06
226 227 1.561076 CCCAGACCTCCATGAATGTCA 59.439 52.381 0.00 0.00 0.00 3.58
227 228 2.174210 CCCAGACCTCCATGAATGTCAT 59.826 50.000 0.00 0.00 37.65 3.06
228 229 3.372349 CCCAGACCTCCATGAATGTCATT 60.372 47.826 0.00 0.00 34.28 2.57
229 230 4.275810 CCAGACCTCCATGAATGTCATTT 58.724 43.478 0.00 0.00 34.28 2.32
230 231 4.708421 CCAGACCTCCATGAATGTCATTTT 59.292 41.667 0.00 0.00 34.28 1.82
231 232 5.393787 CCAGACCTCCATGAATGTCATTTTG 60.394 44.000 0.00 1.53 34.28 2.44
232 233 5.416639 CAGACCTCCATGAATGTCATTTTGA 59.583 40.000 0.00 0.00 34.28 2.69
234 235 4.463891 ACCTCCATGAATGTCATTTTGACC 59.536 41.667 0.00 0.00 46.40 4.02
235 236 4.708421 CCTCCATGAATGTCATTTTGACCT 59.292 41.667 0.00 0.00 46.40 3.85
236 237 5.393787 CCTCCATGAATGTCATTTTGACCTG 60.394 44.000 0.00 0.00 46.40 4.00
237 238 5.323581 TCCATGAATGTCATTTTGACCTGA 58.676 37.500 0.00 0.00 46.40 3.86
238 239 5.953548 TCCATGAATGTCATTTTGACCTGAT 59.046 36.000 0.00 0.00 46.40 2.90
239 240 7.118060 TCCATGAATGTCATTTTGACCTGATA 58.882 34.615 0.00 0.00 46.40 2.15
240 241 7.781219 TCCATGAATGTCATTTTGACCTGATAT 59.219 33.333 0.00 0.00 46.40 1.63
241 242 8.418662 CCATGAATGTCATTTTGACCTGATATT 58.581 33.333 0.00 0.00 46.40 1.28
242 243 9.811995 CATGAATGTCATTTTGACCTGATATTT 57.188 29.630 0.00 0.00 46.40 1.40
244 245 9.642327 TGAATGTCATTTTGACCTGATATTTTG 57.358 29.630 0.00 0.00 46.40 2.44
245 246 8.483307 AATGTCATTTTGACCTGATATTTTGC 57.517 30.769 5.27 0.00 46.40 3.68
246 247 6.990798 TGTCATTTTGACCTGATATTTTGCA 58.009 32.000 5.27 0.00 46.40 4.08
247 248 7.613585 TGTCATTTTGACCTGATATTTTGCAT 58.386 30.769 5.27 0.00 46.40 3.96
248 249 7.546316 TGTCATTTTGACCTGATATTTTGCATG 59.454 33.333 5.27 0.00 46.40 4.06
249 250 6.535865 TCATTTTGACCTGATATTTTGCATGC 59.464 34.615 11.82 11.82 0.00 4.06
250 251 5.402997 TTTGACCTGATATTTTGCATGCA 57.597 34.783 18.46 18.46 0.00 3.96
251 252 4.642445 TGACCTGATATTTTGCATGCAG 57.358 40.909 21.50 8.35 0.00 4.41
252 253 4.018490 TGACCTGATATTTTGCATGCAGT 58.982 39.130 21.50 11.77 0.00 4.40
253 254 4.463539 TGACCTGATATTTTGCATGCAGTT 59.536 37.500 21.50 11.96 0.00 3.16
254 255 5.651576 TGACCTGATATTTTGCATGCAGTTA 59.348 36.000 21.50 13.74 0.00 2.24
255 256 6.140303 ACCTGATATTTTGCATGCAGTTAG 57.860 37.500 21.50 12.55 0.00 2.34
256 257 5.887598 ACCTGATATTTTGCATGCAGTTAGA 59.112 36.000 21.50 7.95 0.00 2.10
257 258 6.377996 ACCTGATATTTTGCATGCAGTTAGAA 59.622 34.615 21.50 9.17 0.00 2.10
258 259 6.694411 CCTGATATTTTGCATGCAGTTAGAAC 59.306 38.462 21.50 11.32 0.00 3.01
259 260 7.155655 TGATATTTTGCATGCAGTTAGAACA 57.844 32.000 21.50 13.62 0.00 3.18
260 261 7.774134 TGATATTTTGCATGCAGTTAGAACAT 58.226 30.769 21.50 6.10 0.00 2.71
261 262 8.252417 TGATATTTTGCATGCAGTTAGAACATT 58.748 29.630 21.50 2.59 0.00 2.71
262 263 6.956299 ATTTTGCATGCAGTTAGAACATTC 57.044 33.333 21.50 0.00 0.00 2.67
263 264 5.450592 TTTGCATGCAGTTAGAACATTCA 57.549 34.783 21.50 0.00 0.00 2.57
264 265 5.648178 TTGCATGCAGTTAGAACATTCAT 57.352 34.783 21.50 0.00 0.00 2.57
265 266 5.239359 TGCATGCAGTTAGAACATTCATC 57.761 39.130 18.46 0.00 0.00 2.92
266 267 4.701171 TGCATGCAGTTAGAACATTCATCA 59.299 37.500 18.46 0.00 0.00 3.07
267 268 5.183522 TGCATGCAGTTAGAACATTCATCAA 59.816 36.000 18.46 0.00 0.00 2.57
268 269 6.127563 TGCATGCAGTTAGAACATTCATCAAT 60.128 34.615 18.46 0.00 0.00 2.57
269 270 6.198403 GCATGCAGTTAGAACATTCATCAATG 59.802 38.462 14.21 0.00 44.57 2.82
282 283 7.943413 CATTCATCAATGTTTACCACAACAA 57.057 32.000 0.00 0.00 40.07 2.83
283 284 8.362860 CATTCATCAATGTTTACCACAACAAA 57.637 30.769 0.00 0.00 40.07 2.83
284 285 8.824781 CATTCATCAATGTTTACCACAACAAAA 58.175 29.630 0.00 0.00 40.07 2.44
285 286 8.777865 TTCATCAATGTTTACCACAACAAAAA 57.222 26.923 0.00 0.00 40.07 1.94
286 287 8.954950 TCATCAATGTTTACCACAACAAAAAT 57.045 26.923 0.00 0.00 40.07 1.82
287 288 9.388506 TCATCAATGTTTACCACAACAAAAATT 57.611 25.926 0.00 0.00 40.07 1.82
288 289 9.435802 CATCAATGTTTACCACAACAAAAATTG 57.564 29.630 4.34 4.34 40.07 2.32
289 290 8.777865 TCAATGTTTACCACAACAAAAATTGA 57.222 26.923 8.03 8.03 42.19 2.57
290 291 8.877779 TCAATGTTTACCACAACAAAAATTGAG 58.122 29.630 8.03 0.00 40.74 3.02
291 292 8.877779 CAATGTTTACCACAACAAAAATTGAGA 58.122 29.630 4.62 0.00 39.88 3.27
292 293 9.612066 AATGTTTACCACAACAAAAATTGAGAT 57.388 25.926 0.00 0.00 40.07 2.75
293 294 9.612066 ATGTTTACCACAACAAAAATTGAGATT 57.388 25.926 0.00 0.00 40.07 2.40
294 295 9.442047 TGTTTACCACAACAAAAATTGAGATTT 57.558 25.926 0.00 0.00 33.60 2.17
338 339 7.712264 TTTTTGATTTTACTGTTCATGCAGG 57.288 32.000 0.00 0.00 40.59 4.85
339 340 6.647334 TTTGATTTTACTGTTCATGCAGGA 57.353 33.333 0.00 0.00 40.59 3.86
340 341 5.885230 TGATTTTACTGTTCATGCAGGAG 57.115 39.130 0.00 0.00 40.59 3.69
341 342 4.156556 TGATTTTACTGTTCATGCAGGAGC 59.843 41.667 8.37 8.37 40.59 4.70
358 359 1.637338 AGCATATGAGCTCGGGATGA 58.363 50.000 20.53 0.00 42.18 2.92
359 360 1.973515 AGCATATGAGCTCGGGATGAA 59.026 47.619 20.53 0.00 42.18 2.57
360 361 2.369860 AGCATATGAGCTCGGGATGAAA 59.630 45.455 20.53 0.00 42.18 2.69
361 362 3.141398 GCATATGAGCTCGGGATGAAAA 58.859 45.455 20.53 0.00 0.00 2.29
362 363 3.188048 GCATATGAGCTCGGGATGAAAAG 59.812 47.826 20.53 1.41 0.00 2.27
363 364 4.635223 CATATGAGCTCGGGATGAAAAGA 58.365 43.478 9.64 0.00 0.00 2.52
364 365 2.680312 TGAGCTCGGGATGAAAAGAG 57.320 50.000 9.64 0.00 0.00 2.85
368 369 2.393271 CTCGGGATGAAAAGAGCACT 57.607 50.000 0.00 0.00 0.00 4.40
369 370 2.704572 CTCGGGATGAAAAGAGCACTT 58.295 47.619 0.00 0.00 38.05 3.16
370 371 3.077359 CTCGGGATGAAAAGAGCACTTT 58.923 45.455 3.03 3.03 46.64 2.66
371 372 3.074412 TCGGGATGAAAAGAGCACTTTC 58.926 45.455 9.66 4.17 44.32 2.62
372 373 2.159653 CGGGATGAAAAGAGCACTTTCG 60.160 50.000 9.66 4.43 44.32 3.46
378 379 4.056050 TGAAAAGAGCACTTTCGGTCTAC 58.944 43.478 9.66 0.00 44.32 2.59
391 392 5.740290 TTCGGTCTACTCCTTGATTCTTT 57.260 39.130 0.00 0.00 0.00 2.52
393 394 5.017490 TCGGTCTACTCCTTGATTCTTTCT 58.983 41.667 0.00 0.00 0.00 2.52
430 431 9.097257 CTTTTGTCACTTTAAACCATTGTGAAT 57.903 29.630 8.35 0.00 39.01 2.57
438 439 3.992943 AACCATTGTGAATCCCGTCTA 57.007 42.857 0.00 0.00 0.00 2.59
458 459 7.280428 CCGTCTACTCTTTGAGTCTTCATAGTA 59.720 40.741 3.30 0.00 42.40 1.82
462 463 7.726033 ACTCTTTGAGTCTTCATAGTACCAT 57.274 36.000 0.00 0.00 38.71 3.55
526 527 8.871125 TCAATCTCAGAGGTTATAATTAGGACC 58.129 37.037 10.59 10.59 0.00 4.46
529 530 6.553852 TCTCAGAGGTTATAATTAGGACCCAC 59.446 42.308 13.61 9.83 32.53 4.61
530 531 5.605488 TCAGAGGTTATAATTAGGACCCACC 59.395 44.000 13.61 3.90 39.35 4.61
531 532 5.368523 CAGAGGTTATAATTAGGACCCACCA 59.631 44.000 13.61 0.00 42.04 4.17
542 543 4.675063 AGGACCCACCACTTAATCAAAT 57.325 40.909 0.00 0.00 42.04 2.32
545 546 4.956075 GGACCCACCACTTAATCAAATGAT 59.044 41.667 0.00 0.00 38.79 2.45
546 547 5.422012 GGACCCACCACTTAATCAAATGATT 59.578 40.000 12.82 12.82 41.81 2.57
547 548 6.070824 GGACCCACCACTTAATCAAATGATTT 60.071 38.462 13.40 0.00 40.63 2.17
549 550 6.269769 ACCCACCACTTAATCAAATGATTTGT 59.730 34.615 16.62 10.22 41.64 2.83
550 551 6.813152 CCCACCACTTAATCAAATGATTTGTC 59.187 38.462 16.62 0.00 41.64 3.18
564 727 8.407832 CAAATGATTTGTCATGCTTATCCACTA 58.592 33.333 9.67 0.00 35.94 2.74
566 729 7.936496 TGATTTGTCATGCTTATCCACTAAA 57.064 32.000 0.00 0.00 0.00 1.85
570 733 8.984891 TTTGTCATGCTTATCCACTAAATTTG 57.015 30.769 0.00 0.00 0.00 2.32
571 734 7.701539 TGTCATGCTTATCCACTAAATTTGT 57.298 32.000 0.00 0.00 0.00 2.83
573 736 9.237187 TGTCATGCTTATCCACTAAATTTGTTA 57.763 29.630 0.00 0.00 0.00 2.41
576 739 9.683069 CATGCTTATCCACTAAATTTGTTATCC 57.317 33.333 0.00 0.00 0.00 2.59
577 740 8.232913 TGCTTATCCACTAAATTTGTTATCCC 57.767 34.615 0.00 0.00 0.00 3.85
578 741 7.286775 TGCTTATCCACTAAATTTGTTATCCCC 59.713 37.037 0.00 0.00 0.00 4.81
580 743 8.760980 TTATCCACTAAATTTGTTATCCCCTG 57.239 34.615 0.00 0.00 0.00 4.45
581 744 6.147437 TCCACTAAATTTGTTATCCCCTGT 57.853 37.500 0.00 0.00 0.00 4.00
582 745 6.184789 TCCACTAAATTTGTTATCCCCTGTC 58.815 40.000 0.00 0.00 0.00 3.51
583 746 5.949354 CCACTAAATTTGTTATCCCCTGTCA 59.051 40.000 0.00 0.00 0.00 3.58
584 747 6.435904 CCACTAAATTTGTTATCCCCTGTCAA 59.564 38.462 0.00 0.00 0.00 3.18
585 748 7.362920 CCACTAAATTTGTTATCCCCTGTCAAG 60.363 40.741 0.00 0.00 0.00 3.02
586 749 7.176690 CACTAAATTTGTTATCCCCTGTCAAGT 59.823 37.037 0.00 0.00 0.00 3.16
587 750 8.387813 ACTAAATTTGTTATCCCCTGTCAAGTA 58.612 33.333 0.00 0.00 0.00 2.24
589 752 8.485578 AAATTTGTTATCCCCTGTCAAGTAAA 57.514 30.769 0.00 0.00 0.00 2.01
590 753 8.485578 AATTTGTTATCCCCTGTCAAGTAAAA 57.514 30.769 0.00 0.00 0.00 1.52
591 754 6.887626 TTGTTATCCCCTGTCAAGTAAAAC 57.112 37.500 0.00 0.00 0.00 2.43
592 755 6.195600 TGTTATCCCCTGTCAAGTAAAACT 57.804 37.500 0.00 0.00 0.00 2.66
593 756 6.001460 TGTTATCCCCTGTCAAGTAAAACTG 58.999 40.000 0.00 0.00 0.00 3.16
594 757 4.724279 ATCCCCTGTCAAGTAAAACTGT 57.276 40.909 0.00 0.00 0.00 3.55
595 758 4.081322 TCCCCTGTCAAGTAAAACTGTC 57.919 45.455 0.00 0.00 0.00 3.51
597 760 3.564225 CCCCTGTCAAGTAAAACTGTCAC 59.436 47.826 0.00 0.00 0.00 3.67
598 761 4.196193 CCCTGTCAAGTAAAACTGTCACA 58.804 43.478 0.00 0.00 0.00 3.58
599 762 4.638421 CCCTGTCAAGTAAAACTGTCACAA 59.362 41.667 0.00 0.00 0.00 3.33
622 785 5.898630 AAAACGTTCATTTTACCATGTGC 57.101 34.783 0.00 0.00 29.93 4.57
623 786 4.576216 AACGTTCATTTTACCATGTGCA 57.424 36.364 0.00 0.00 0.00 4.57
624 787 3.896122 ACGTTCATTTTACCATGTGCAC 58.104 40.909 10.75 10.75 0.00 4.57
625 788 3.316588 ACGTTCATTTTACCATGTGCACA 59.683 39.130 24.08 24.08 0.00 4.57
626 789 3.668191 CGTTCATTTTACCATGTGCACAC 59.332 43.478 24.37 3.25 0.00 3.82
637 800 2.379054 GTGCACACACTTGACGTCA 58.621 52.632 15.76 15.76 43.85 4.35
638 801 0.301687 GTGCACACACTTGACGTCAG 59.698 55.000 19.11 14.84 43.85 3.51
639 802 0.809636 TGCACACACTTGACGTCAGG 60.810 55.000 24.46 24.46 0.00 3.86
642 836 2.124903 CACACACTTGACGTCAGGTAC 58.875 52.381 29.85 0.00 34.23 3.34
647 841 4.562789 CACACTTGACGTCAGGTACATATG 59.437 45.833 29.85 19.54 34.23 1.78
655 849 7.548967 TGACGTCAGGTACATATGAAATACAA 58.451 34.615 15.76 0.00 0.00 2.41
670 865 4.882671 AATACAAATGTGGCGCTCTAAG 57.117 40.909 7.64 0.00 0.00 2.18
682 877 4.570772 TGGCGCTCTAAGAACAATGTATTC 59.429 41.667 7.64 0.00 0.00 1.75
730 925 7.383300 CGATAGAGATGCTTGATTATGACAACA 59.617 37.037 0.00 0.00 39.76 3.33
768 963 6.174760 TGCCTAAGTAATTCCGTTTGTATGT 58.825 36.000 0.00 0.00 0.00 2.29
779 974 6.387041 TCCGTTTGTATGTATCTAGGACAG 57.613 41.667 4.94 0.00 0.00 3.51
832 1027 8.768501 ATGACAGTAGATGTTACTATCTTCCA 57.231 34.615 0.00 0.00 44.17 3.53
885 3196 8.090831 TGCAAGTGATCAACATATATACTCCTC 58.909 37.037 0.00 0.00 0.00 3.71
886 3197 7.547370 GCAAGTGATCAACATATATACTCCTCC 59.453 40.741 0.00 0.00 0.00 4.30
887 3198 8.811017 CAAGTGATCAACATATATACTCCTCCT 58.189 37.037 0.00 0.00 0.00 3.69
888 3199 8.964533 AGTGATCAACATATATACTCCTCCTT 57.035 34.615 0.00 0.00 0.00 3.36
892 3203 9.810545 GATCAACATATATACTCCTCCTTAAGC 57.189 37.037 0.00 0.00 0.00 3.09
893 3204 8.721133 TCAACATATATACTCCTCCTTAAGCA 57.279 34.615 0.00 0.00 0.00 3.91
894 3205 8.585881 TCAACATATATACTCCTCCTTAAGCAC 58.414 37.037 0.00 0.00 0.00 4.40
895 3206 8.589338 CAACATATATACTCCTCCTTAAGCACT 58.411 37.037 0.00 0.00 0.00 4.40
896 3207 8.128322 ACATATATACTCCTCCTTAAGCACTG 57.872 38.462 0.00 0.00 0.00 3.66
897 3208 7.179338 ACATATATACTCCTCCTTAAGCACTGG 59.821 40.741 0.00 0.00 0.00 4.00
898 3209 2.327325 ACTCCTCCTTAAGCACTGGA 57.673 50.000 0.00 0.94 0.00 3.86
899 3210 2.183679 ACTCCTCCTTAAGCACTGGAG 58.816 52.381 20.07 20.07 45.02 3.86
900 3211 2.183679 CTCCTCCTTAAGCACTGGAGT 58.816 52.381 16.41 0.00 44.21 3.85
901 3212 3.366396 CTCCTCCTTAAGCACTGGAGTA 58.634 50.000 16.41 0.15 44.21 2.59
902 3213 3.366396 TCCTCCTTAAGCACTGGAGTAG 58.634 50.000 12.01 1.66 44.21 2.57
1017 3328 1.948145 CTCATGGCTTGCTCCATCTTC 59.052 52.381 0.00 0.00 44.63 2.87
1292 3618 0.249741 AACGTATGTAGGCGCCCATC 60.250 55.000 26.15 14.56 0.00 3.51
1312 3642 1.449601 GGCATCCGACACCGAACAT 60.450 57.895 0.00 0.00 38.22 2.71
1313 3643 0.179094 GGCATCCGACACCGAACATA 60.179 55.000 0.00 0.00 38.22 2.29
1314 3644 1.540363 GGCATCCGACACCGAACATAT 60.540 52.381 0.00 0.00 38.22 1.78
1317 3647 3.183775 GCATCCGACACCGAACATATAAC 59.816 47.826 0.00 0.00 38.22 1.89
1575 3914 0.613777 CCTTCTACCACCACCTGGAC 59.386 60.000 0.00 0.00 43.95 4.02
1621 3960 4.704833 GCTGGCTCCGGCTCAACA 62.705 66.667 12.30 0.00 44.39 3.33
1822 4161 1.811965 CCAAGCCATGAATCACACGAA 59.188 47.619 0.00 0.00 0.00 3.85
1823 4162 2.159476 CCAAGCCATGAATCACACGAAG 60.159 50.000 0.00 0.00 0.00 3.79
1824 4163 1.089920 AGCCATGAATCACACGAAGC 58.910 50.000 0.00 0.00 0.00 3.86
1848 4187 2.611974 ACGCCGTTTGATGATTTGAC 57.388 45.000 0.00 0.00 0.00 3.18
1854 4193 4.229096 CCGTTTGATGATTTGACTGGTTG 58.771 43.478 0.00 0.00 0.00 3.77
1873 4212 6.055231 GGTTGCAACCTTGGTTTTAATTTC 57.945 37.500 36.26 8.32 45.75 2.17
1874 4213 5.586643 GGTTGCAACCTTGGTTTTAATTTCA 59.413 36.000 36.26 0.00 45.75 2.69
1881 4220 8.603181 CAACCTTGGTTTTAATTTCAGTTTCAG 58.397 33.333 1.76 0.00 0.00 3.02
1883 4222 8.536175 ACCTTGGTTTTAATTTCAGTTTCAGAA 58.464 29.630 0.00 0.00 0.00 3.02
1884 4223 9.377312 CCTTGGTTTTAATTTCAGTTTCAGAAA 57.623 29.630 0.00 0.00 39.11 2.52
1901 4240 6.785337 TCAGAAATAATTCGACTCCTACCA 57.215 37.500 0.00 0.00 40.63 3.25
1914 4253 3.899980 ACTCCTACCAAAACTACCGAAGT 59.100 43.478 0.00 0.00 41.49 3.01
2011 4364 3.315749 GGTGTGTGTTAATTTGGACGGAA 59.684 43.478 0.00 0.00 0.00 4.30
2083 4436 9.931210 AATTCTAATCTTAAATAAACTTCGCCG 57.069 29.630 0.00 0.00 0.00 6.46
2084 4437 7.473027 TCTAATCTTAAATAAACTTCGCCGG 57.527 36.000 0.00 0.00 0.00 6.13
2091 4444 2.004583 TAAACTTCGCCGGTGATGAG 57.995 50.000 31.03 22.87 0.00 2.90
2094 4447 2.125552 TTCGCCGGTGATGAGCTG 60.126 61.111 20.33 0.00 0.00 4.24
2276 4650 8.218338 AGAATAATTTGACCAGACAATGCTAG 57.782 34.615 0.00 0.00 0.00 3.42
2278 4652 7.944729 ATAATTTGACCAGACAATGCTAGTT 57.055 32.000 0.00 0.00 0.00 2.24
2280 4654 3.334583 TGACCAGACAATGCTAGTTCC 57.665 47.619 0.00 0.00 0.00 3.62
2283 4657 4.716784 TGACCAGACAATGCTAGTTCCTAT 59.283 41.667 0.00 0.00 0.00 2.57
2285 4659 4.716784 ACCAGACAATGCTAGTTCCTATCA 59.283 41.667 0.00 0.00 0.00 2.15
2290 4664 6.098838 AGACAATGCTAGTTCCTATCATGTGA 59.901 38.462 0.00 0.00 0.00 3.58
2294 4668 6.976934 TGCTAGTTCCTATCATGTGACATA 57.023 37.500 0.00 0.00 0.00 2.29
2309 4683 8.905850 TCATGTGACATATGTGATAAGCAATTT 58.094 29.630 14.43 0.00 0.00 1.82
2345 4719 7.820648 AGAAACCAATGCTAATTCTTACACTG 58.179 34.615 0.00 0.00 0.00 3.66
2350 4724 6.150976 CCAATGCTAATTCTTACACTGACCAA 59.849 38.462 0.00 0.00 0.00 3.67
2351 4725 7.309133 CCAATGCTAATTCTTACACTGACCAAA 60.309 37.037 0.00 0.00 0.00 3.28
2352 4726 6.554334 TGCTAATTCTTACACTGACCAAAC 57.446 37.500 0.00 0.00 0.00 2.93
2353 4727 6.058833 TGCTAATTCTTACACTGACCAAACA 58.941 36.000 0.00 0.00 0.00 2.83
2354 4728 6.544197 TGCTAATTCTTACACTGACCAAACAA 59.456 34.615 0.00 0.00 0.00 2.83
2355 4729 7.230510 TGCTAATTCTTACACTGACCAAACAAT 59.769 33.333 0.00 0.00 0.00 2.71
2356 4730 7.538678 GCTAATTCTTACACTGACCAAACAATG 59.461 37.037 0.00 0.00 0.00 2.82
2357 4731 4.829064 TCTTACACTGACCAAACAATGC 57.171 40.909 0.00 0.00 0.00 3.56
2358 4732 4.460263 TCTTACACTGACCAAACAATGCT 58.540 39.130 0.00 0.00 0.00 3.79
2359 4733 5.616270 TCTTACACTGACCAAACAATGCTA 58.384 37.500 0.00 0.00 0.00 3.49
2437 5008 2.503356 TGGGCTTGTCCAACATTTTTGT 59.497 40.909 0.00 0.00 36.21 2.83
2438 5009 3.054802 TGGGCTTGTCCAACATTTTTGTT 60.055 39.130 0.00 0.00 36.21 2.83
2439 5010 3.312146 GGGCTTGTCCAACATTTTTGTTG 59.688 43.478 11.02 11.02 46.21 3.33
2472 5043 8.055279 TCTCAATTTGAATGGAATTGTCCTAC 57.945 34.615 0.01 0.00 45.22 3.18
2477 5048 3.953612 TGAATGGAATTGTCCTACATGGC 59.046 43.478 0.00 0.00 45.22 4.40
2497 5068 6.114187 TGGCATAATAGTACATCCCTCAAG 57.886 41.667 0.00 0.00 0.00 3.02
2508 5079 1.975407 CCCTCAAGCCAGCCACAAG 60.975 63.158 0.00 0.00 0.00 3.16
2527 5098 2.364961 CTTCCTCCCTCCTCCCGT 59.635 66.667 0.00 0.00 0.00 5.28
2528 5099 2.038975 TTCCTCCCTCCTCCCGTG 59.961 66.667 0.00 0.00 0.00 4.94
2537 5108 1.280998 CCTCCTCCCGTGTGGTATTTT 59.719 52.381 0.00 0.00 34.77 1.82
2546 5117 4.223659 CCGTGTGGTATTTTACTGCAAAC 58.776 43.478 0.00 0.00 0.00 2.93
2547 5118 4.023536 CCGTGTGGTATTTTACTGCAAACT 60.024 41.667 0.00 0.00 0.00 2.66
2548 5119 5.179742 CCGTGTGGTATTTTACTGCAAACTA 59.820 40.000 0.00 0.00 0.00 2.24
2549 5120 6.304126 CGTGTGGTATTTTACTGCAAACTAG 58.696 40.000 0.00 0.00 0.00 2.57
2550 5121 6.146510 CGTGTGGTATTTTACTGCAAACTAGA 59.853 38.462 0.00 0.00 0.00 2.43
2551 5122 7.307514 CGTGTGGTATTTTACTGCAAACTAGAA 60.308 37.037 0.00 0.00 0.00 2.10
2552 5123 8.015658 GTGTGGTATTTTACTGCAAACTAGAAG 58.984 37.037 0.00 0.00 0.00 2.85
2553 5124 7.934665 TGTGGTATTTTACTGCAAACTAGAAGA 59.065 33.333 0.00 0.00 0.00 2.87
2554 5125 8.780249 GTGGTATTTTACTGCAAACTAGAAGAA 58.220 33.333 0.00 0.00 0.00 2.52
2555 5126 8.780249 TGGTATTTTACTGCAAACTAGAAGAAC 58.220 33.333 0.00 0.00 0.00 3.01
2556 5127 7.955864 GGTATTTTACTGCAAACTAGAAGAACG 59.044 37.037 0.00 0.00 0.00 3.95
2557 5128 4.985044 TTACTGCAAACTAGAAGAACGC 57.015 40.909 0.00 0.00 0.00 4.84
2558 5129 2.143925 ACTGCAAACTAGAAGAACGCC 58.856 47.619 0.00 0.00 0.00 5.68
2559 5130 1.464997 CTGCAAACTAGAAGAACGCCC 59.535 52.381 0.00 0.00 0.00 6.13
2560 5131 0.442699 GCAAACTAGAAGAACGCCCG 59.557 55.000 0.00 0.00 0.00 6.13
2561 5132 1.792006 CAAACTAGAAGAACGCCCGT 58.208 50.000 0.00 0.00 0.00 5.28
2562 5133 1.459592 CAAACTAGAAGAACGCCCGTG 59.540 52.381 0.00 0.00 0.00 4.94
2563 5134 0.669625 AACTAGAAGAACGCCCGTGC 60.670 55.000 0.00 0.00 0.00 5.34
2581 5152 3.302344 GTTGCAACGGGGCCACAT 61.302 61.111 14.90 0.00 30.39 3.21
2582 5153 2.522923 TTGCAACGGGGCCACATT 60.523 55.556 5.46 0.00 0.00 2.71
2583 5154 1.228583 TTGCAACGGGGCCACATTA 60.229 52.632 5.46 0.00 0.00 1.90
2584 5155 0.827925 TTGCAACGGGGCCACATTAA 60.828 50.000 5.46 0.00 0.00 1.40
2585 5156 1.214325 GCAACGGGGCCACATTAAC 59.786 57.895 5.46 0.00 0.00 2.01
2586 5157 1.248101 GCAACGGGGCCACATTAACT 61.248 55.000 5.46 0.00 0.00 2.24
2587 5158 1.253100 CAACGGGGCCACATTAACTT 58.747 50.000 5.46 0.00 0.00 2.66
2588 5159 1.616374 CAACGGGGCCACATTAACTTT 59.384 47.619 5.46 0.00 0.00 2.66
2589 5160 2.820787 CAACGGGGCCACATTAACTTTA 59.179 45.455 5.46 0.00 0.00 1.85
2590 5161 3.157750 ACGGGGCCACATTAACTTTAA 57.842 42.857 5.46 0.00 0.00 1.52
2591 5162 3.086282 ACGGGGCCACATTAACTTTAAG 58.914 45.455 5.46 0.00 0.00 1.85
2592 5163 3.086282 CGGGGCCACATTAACTTTAAGT 58.914 45.455 5.46 0.00 0.00 2.24
2593 5164 3.119637 CGGGGCCACATTAACTTTAAGTG 60.120 47.826 5.46 0.00 0.00 3.16
2594 5165 3.830178 GGGGCCACATTAACTTTAAGTGT 59.170 43.478 4.39 0.00 0.00 3.55
2595 5166 4.282449 GGGGCCACATTAACTTTAAGTGTT 59.718 41.667 4.39 2.36 0.00 3.32
2596 5167 5.466819 GGGCCACATTAACTTTAAGTGTTC 58.533 41.667 4.39 0.00 0.00 3.18
2597 5168 5.010213 GGGCCACATTAACTTTAAGTGTTCA 59.990 40.000 4.39 0.00 0.00 3.18
2598 5169 6.461788 GGGCCACATTAACTTTAAGTGTTCAA 60.462 38.462 4.39 0.00 0.00 2.69
2599 5170 7.151976 GGCCACATTAACTTTAAGTGTTCAAT 58.848 34.615 0.00 0.00 0.00 2.57
2600 5171 8.301002 GGCCACATTAACTTTAAGTGTTCAATA 58.699 33.333 0.00 0.00 0.00 1.90
2601 5172 9.855021 GCCACATTAACTTTAAGTGTTCAATAT 57.145 29.630 0.00 0.00 0.00 1.28
2652 5223 8.883954 ATTCTCATACATATCAAGTGACACTG 57.116 34.615 9.33 3.88 0.00 3.66
2653 5224 6.809869 TCTCATACATATCAAGTGACACTGG 58.190 40.000 9.33 6.20 0.00 4.00
2654 5225 5.359756 TCATACATATCAAGTGACACTGGC 58.640 41.667 9.33 0.00 0.00 4.85
2655 5226 2.621338 ACATATCAAGTGACACTGGCG 58.379 47.619 9.33 1.18 0.00 5.69
2656 5227 2.233676 ACATATCAAGTGACACTGGCGA 59.766 45.455 9.33 6.96 0.00 5.54
2657 5228 2.363788 TATCAAGTGACACTGGCGAC 57.636 50.000 9.33 0.00 0.00 5.19
2658 5229 0.320771 ATCAAGTGACACTGGCGACC 60.321 55.000 9.33 0.00 0.00 4.79
2659 5230 1.069765 CAAGTGACACTGGCGACCT 59.930 57.895 9.33 0.00 0.00 3.85
2660 5231 0.532862 CAAGTGACACTGGCGACCTT 60.533 55.000 9.33 0.00 0.00 3.50
2661 5232 0.180406 AAGTGACACTGGCGACCTTT 59.820 50.000 9.33 0.00 0.00 3.11
2662 5233 0.180406 AGTGACACTGGCGACCTTTT 59.820 50.000 7.47 0.00 0.00 2.27
2663 5234 1.021968 GTGACACTGGCGACCTTTTT 58.978 50.000 0.00 0.00 0.00 1.94
2683 5254 6.531503 TTTTTACCATCAAAACCTCACACA 57.468 33.333 0.00 0.00 0.00 3.72
2684 5255 5.508200 TTTACCATCAAAACCTCACACAC 57.492 39.130 0.00 0.00 0.00 3.82
2685 5256 3.011566 ACCATCAAAACCTCACACACA 57.988 42.857 0.00 0.00 0.00 3.72
2686 5257 3.565307 ACCATCAAAACCTCACACACAT 58.435 40.909 0.00 0.00 0.00 3.21
2687 5258 4.724399 ACCATCAAAACCTCACACACATA 58.276 39.130 0.00 0.00 0.00 2.29
2688 5259 4.518970 ACCATCAAAACCTCACACACATAC 59.481 41.667 0.00 0.00 0.00 2.39
2689 5260 4.518590 CCATCAAAACCTCACACACATACA 59.481 41.667 0.00 0.00 0.00 2.29
2690 5261 5.451908 CATCAAAACCTCACACACATACAC 58.548 41.667 0.00 0.00 0.00 2.90
2691 5262 4.776349 TCAAAACCTCACACACATACACT 58.224 39.130 0.00 0.00 0.00 3.55
2692 5263 4.814234 TCAAAACCTCACACACATACACTC 59.186 41.667 0.00 0.00 0.00 3.51
2693 5264 4.689612 AAACCTCACACACATACACTCT 57.310 40.909 0.00 0.00 0.00 3.24
2694 5265 3.944055 ACCTCACACACATACACTCTC 57.056 47.619 0.00 0.00 0.00 3.20
2695 5266 2.563179 ACCTCACACACATACACTCTCC 59.437 50.000 0.00 0.00 0.00 3.71
2696 5267 2.416027 CCTCACACACATACACTCTCCG 60.416 54.545 0.00 0.00 0.00 4.63
2697 5268 2.229062 CTCACACACATACACTCTCCGT 59.771 50.000 0.00 0.00 0.00 4.69
2698 5269 3.414269 TCACACACATACACTCTCCGTA 58.586 45.455 0.00 0.00 0.00 4.02
2699 5270 3.189910 TCACACACATACACTCTCCGTAC 59.810 47.826 0.00 0.00 0.00 3.67
2700 5271 2.490903 ACACACATACACTCTCCGTACC 59.509 50.000 0.00 0.00 0.00 3.34
2701 5272 2.753452 CACACATACACTCTCCGTACCT 59.247 50.000 0.00 0.00 0.00 3.08
2702 5273 3.015327 ACACATACACTCTCCGTACCTC 58.985 50.000 0.00 0.00 0.00 3.85
2703 5274 3.280295 CACATACACTCTCCGTACCTCT 58.720 50.000 0.00 0.00 0.00 3.69
2704 5275 3.695060 CACATACACTCTCCGTACCTCTT 59.305 47.826 0.00 0.00 0.00 2.85
2705 5276 3.946558 ACATACACTCTCCGTACCTCTTC 59.053 47.826 0.00 0.00 0.00 2.87
2706 5277 1.836802 ACACTCTCCGTACCTCTTCC 58.163 55.000 0.00 0.00 0.00 3.46
2707 5278 1.355043 ACACTCTCCGTACCTCTTCCT 59.645 52.381 0.00 0.00 0.00 3.36
2708 5279 2.018515 CACTCTCCGTACCTCTTCCTC 58.981 57.143 0.00 0.00 0.00 3.71
2709 5280 1.634459 ACTCTCCGTACCTCTTCCTCA 59.366 52.381 0.00 0.00 0.00 3.86
2710 5281 2.018515 CTCTCCGTACCTCTTCCTCAC 58.981 57.143 0.00 0.00 0.00 3.51
2711 5282 1.634459 TCTCCGTACCTCTTCCTCACT 59.366 52.381 0.00 0.00 0.00 3.41
2712 5283 2.018515 CTCCGTACCTCTTCCTCACTC 58.981 57.143 0.00 0.00 0.00 3.51
2713 5284 1.634459 TCCGTACCTCTTCCTCACTCT 59.366 52.381 0.00 0.00 0.00 3.24
2714 5285 2.018515 CCGTACCTCTTCCTCACTCTC 58.981 57.143 0.00 0.00 0.00 3.20
2715 5286 2.356330 CCGTACCTCTTCCTCACTCTCT 60.356 54.545 0.00 0.00 0.00 3.10
2716 5287 2.940410 CGTACCTCTTCCTCACTCTCTC 59.060 54.545 0.00 0.00 0.00 3.20
2717 5288 3.370103 CGTACCTCTTCCTCACTCTCTCT 60.370 52.174 0.00 0.00 0.00 3.10
2718 5289 3.366052 ACCTCTTCCTCACTCTCTCTC 57.634 52.381 0.00 0.00 0.00 3.20
2719 5290 2.025321 ACCTCTTCCTCACTCTCTCTCC 60.025 54.545 0.00 0.00 0.00 3.71
2720 5291 2.654863 CTCTTCCTCACTCTCTCTCCC 58.345 57.143 0.00 0.00 0.00 4.30
2721 5292 1.286553 TCTTCCTCACTCTCTCTCCCC 59.713 57.143 0.00 0.00 0.00 4.81
2722 5293 0.336737 TTCCTCACTCTCTCTCCCCC 59.663 60.000 0.00 0.00 0.00 5.40
2723 5294 0.553862 TCCTCACTCTCTCTCCCCCT 60.554 60.000 0.00 0.00 0.00 4.79
2724 5295 0.106217 CCTCACTCTCTCTCCCCCTC 60.106 65.000 0.00 0.00 0.00 4.30
2725 5296 0.926293 CTCACTCTCTCTCCCCCTCT 59.074 60.000 0.00 0.00 0.00 3.69
2726 5297 0.923358 TCACTCTCTCTCCCCCTCTC 59.077 60.000 0.00 0.00 0.00 3.20
2727 5298 0.926293 CACTCTCTCTCCCCCTCTCT 59.074 60.000 0.00 0.00 0.00 3.10
2728 5299 1.133792 CACTCTCTCTCCCCCTCTCTC 60.134 61.905 0.00 0.00 0.00 3.20
2729 5300 0.478507 CTCTCTCTCCCCCTCTCTCC 59.521 65.000 0.00 0.00 0.00 3.71
2730 5301 0.996762 TCTCTCTCCCCCTCTCTCCC 60.997 65.000 0.00 0.00 0.00 4.30
2731 5302 2.015726 TCTCTCCCCCTCTCTCCCC 61.016 68.421 0.00 0.00 0.00 4.81
2732 5303 3.036959 TCTCCCCCTCTCTCCCCC 61.037 72.222 0.00 0.00 0.00 5.40
2750 5321 3.223674 CCCCCTCTCTCTCTCTCTAAC 57.776 57.143 0.00 0.00 0.00 2.34
2751 5322 2.512056 CCCCCTCTCTCTCTCTCTAACA 59.488 54.545 0.00 0.00 0.00 2.41
2752 5323 3.551846 CCCCTCTCTCTCTCTCTAACAC 58.448 54.545 0.00 0.00 0.00 3.32
2753 5324 3.053991 CCCCTCTCTCTCTCTCTAACACA 60.054 52.174 0.00 0.00 0.00 3.72
2754 5325 3.945285 CCCTCTCTCTCTCTCTAACACAC 59.055 52.174 0.00 0.00 0.00 3.82
2755 5326 4.566697 CCCTCTCTCTCTCTCTAACACACA 60.567 50.000 0.00 0.00 0.00 3.72
2756 5327 4.394920 CCTCTCTCTCTCTCTAACACACAC 59.605 50.000 0.00 0.00 0.00 3.82
2757 5328 4.974399 TCTCTCTCTCTCTAACACACACA 58.026 43.478 0.00 0.00 0.00 3.72
2758 5329 4.757657 TCTCTCTCTCTCTAACACACACAC 59.242 45.833 0.00 0.00 0.00 3.82
2759 5330 4.461198 TCTCTCTCTCTAACACACACACA 58.539 43.478 0.00 0.00 0.00 3.72
2760 5331 5.073428 TCTCTCTCTCTAACACACACACAT 58.927 41.667 0.00 0.00 0.00 3.21
2761 5332 6.238648 TCTCTCTCTCTAACACACACACATA 58.761 40.000 0.00 0.00 0.00 2.29
2762 5333 6.887002 TCTCTCTCTCTAACACACACACATAT 59.113 38.462 0.00 0.00 0.00 1.78
2763 5334 7.066404 TCTCTCTCTCTAACACACACACATATC 59.934 40.741 0.00 0.00 0.00 1.63
2764 5335 6.095580 TCTCTCTCTAACACACACACATATCC 59.904 42.308 0.00 0.00 0.00 2.59
2765 5336 5.714806 TCTCTCTAACACACACACATATCCA 59.285 40.000 0.00 0.00 0.00 3.41
2766 5337 6.381133 TCTCTCTAACACACACACATATCCAT 59.619 38.462 0.00 0.00 0.00 3.41
2767 5338 6.573434 TCTCTAACACACACACATATCCATC 58.427 40.000 0.00 0.00 0.00 3.51
2768 5339 6.381133 TCTCTAACACACACACATATCCATCT 59.619 38.462 0.00 0.00 0.00 2.90
2769 5340 6.946340 TCTAACACACACACATATCCATCTT 58.054 36.000 0.00 0.00 0.00 2.40
2770 5341 8.073467 TCTAACACACACACATATCCATCTTA 57.927 34.615 0.00 0.00 0.00 2.10
2771 5342 8.704668 TCTAACACACACACATATCCATCTTAT 58.295 33.333 0.00 0.00 0.00 1.73
2772 5343 9.330063 CTAACACACACACATATCCATCTTATT 57.670 33.333 0.00 0.00 0.00 1.40
2773 5344 7.558161 ACACACACACATATCCATCTTATTG 57.442 36.000 0.00 0.00 0.00 1.90
2774 5345 6.543465 ACACACACACATATCCATCTTATTGG 59.457 38.462 0.00 0.00 38.18 3.16
2775 5346 6.016860 CACACACACATATCCATCTTATTGGG 60.017 42.308 0.00 0.00 37.37 4.12
2776 5347 6.064060 CACACACATATCCATCTTATTGGGT 58.936 40.000 0.00 0.00 37.37 4.51
2777 5348 7.147391 ACACACACATATCCATCTTATTGGGTA 60.147 37.037 0.00 0.00 36.79 3.69
2778 5349 7.884877 CACACACATATCCATCTTATTGGGTAT 59.115 37.037 0.00 0.00 42.63 2.73
2779 5350 9.111519 ACACACATATCCATCTTATTGGGTATA 57.888 33.333 0.00 0.00 40.41 1.47
2780 5351 9.605275 CACACATATCCATCTTATTGGGTATAG 57.395 37.037 0.00 0.00 40.41 1.31
2781 5352 8.772250 ACACATATCCATCTTATTGGGTATAGG 58.228 37.037 0.00 0.00 40.41 2.57
2782 5353 8.992349 CACATATCCATCTTATTGGGTATAGGA 58.008 37.037 0.00 0.00 40.41 2.94
2783 5354 8.993424 ACATATCCATCTTATTGGGTATAGGAC 58.007 37.037 0.00 0.00 40.41 3.85
2803 5374 7.392766 AGGACCATAATCCATCTATTTCACA 57.607 36.000 0.00 0.00 41.73 3.58
2804 5375 7.227156 AGGACCATAATCCATCTATTTCACAC 58.773 38.462 0.00 0.00 41.73 3.82
2805 5376 6.998074 GGACCATAATCCATCTATTTCACACA 59.002 38.462 0.00 0.00 38.77 3.72
2806 5377 7.667219 GGACCATAATCCATCTATTTCACACAT 59.333 37.037 0.00 0.00 38.77 3.21
2807 5378 9.725019 GACCATAATCCATCTATTTCACACATA 57.275 33.333 0.00 0.00 0.00 2.29
2810 5381 9.999009 CATAATCCATCTATTTCACACATATGC 57.001 33.333 1.58 0.00 0.00 3.14
2811 5382 9.970553 ATAATCCATCTATTTCACACATATGCT 57.029 29.630 1.58 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 9.037737 GCATGCAATTAGAAAATGTATCAATGT 57.962 29.630 14.21 0.00 0.00 2.71
67 68 9.036671 TGCATGCAATTAGAAAATGTATCAATG 57.963 29.630 20.30 0.00 0.00 2.82
68 69 9.602568 TTGCATGCAATTAGAAAATGTATCAAT 57.397 25.926 28.80 0.00 0.00 2.57
69 70 8.999220 TTGCATGCAATTAGAAAATGTATCAA 57.001 26.923 28.80 0.00 0.00 2.57
70 71 8.999220 TTTGCATGCAATTAGAAAATGTATCA 57.001 26.923 32.27 9.92 35.70 2.15
74 75 9.615295 GAAATTTTGCATGCAATTAGAAAATGT 57.385 25.926 32.27 21.72 35.70 2.71
75 76 9.613957 TGAAATTTTGCATGCAATTAGAAAATG 57.386 25.926 32.27 0.00 35.70 2.32
76 77 9.834628 CTGAAATTTTGCATGCAATTAGAAAAT 57.165 25.926 32.27 23.33 35.70 1.82
77 78 8.291032 CCTGAAATTTTGCATGCAATTAGAAAA 58.709 29.630 32.27 22.21 35.70 2.29
78 79 7.444792 ACCTGAAATTTTGCATGCAATTAGAAA 59.555 29.630 32.27 22.90 35.70 2.52
79 80 6.935771 ACCTGAAATTTTGCATGCAATTAGAA 59.064 30.769 32.27 23.26 35.70 2.10
80 81 6.465948 ACCTGAAATTTTGCATGCAATTAGA 58.534 32.000 32.27 15.95 35.70 2.10
81 82 6.730960 ACCTGAAATTTTGCATGCAATTAG 57.269 33.333 32.27 21.74 35.70 1.73
82 83 6.709397 TCAACCTGAAATTTTGCATGCAATTA 59.291 30.769 32.27 23.03 35.70 1.40
83 84 5.531659 TCAACCTGAAATTTTGCATGCAATT 59.468 32.000 32.27 23.54 35.70 2.32
84 85 5.064558 TCAACCTGAAATTTTGCATGCAAT 58.935 33.333 32.27 18.57 35.70 3.56
85 86 4.449131 TCAACCTGAAATTTTGCATGCAA 58.551 34.783 28.80 28.80 0.00 4.08
86 87 4.069300 TCAACCTGAAATTTTGCATGCA 57.931 36.364 18.46 18.46 0.00 3.96
87 88 5.421212 TTTCAACCTGAAATTTTGCATGC 57.579 34.783 11.82 11.82 41.02 4.06
98 99 6.227522 TCTACGAATGTCATTTCAACCTGAA 58.772 36.000 0.00 0.00 34.03 3.02
99 100 5.789521 TCTACGAATGTCATTTCAACCTGA 58.210 37.500 0.00 0.00 0.00 3.86
100 101 5.063944 CCTCTACGAATGTCATTTCAACCTG 59.936 44.000 0.00 0.00 0.00 4.00
101 102 5.178797 CCTCTACGAATGTCATTTCAACCT 58.821 41.667 0.00 0.00 0.00 3.50
102 103 4.935808 ACCTCTACGAATGTCATTTCAACC 59.064 41.667 0.00 0.00 0.00 3.77
103 104 5.063564 GGACCTCTACGAATGTCATTTCAAC 59.936 44.000 0.00 0.00 0.00 3.18
104 105 5.175859 GGACCTCTACGAATGTCATTTCAA 58.824 41.667 0.00 0.00 0.00 2.69
105 106 4.676986 CGGACCTCTACGAATGTCATTTCA 60.677 45.833 0.00 0.00 0.00 2.69
106 107 3.797256 CGGACCTCTACGAATGTCATTTC 59.203 47.826 0.00 0.00 0.00 2.17
107 108 3.446161 TCGGACCTCTACGAATGTCATTT 59.554 43.478 0.00 0.00 36.01 2.32
108 109 3.021695 TCGGACCTCTACGAATGTCATT 58.978 45.455 0.00 0.00 36.01 2.57
109 110 2.619177 CTCGGACCTCTACGAATGTCAT 59.381 50.000 0.00 0.00 38.79 3.06
110 111 2.014857 CTCGGACCTCTACGAATGTCA 58.985 52.381 0.00 0.00 38.79 3.58
111 112 2.286872 TCTCGGACCTCTACGAATGTC 58.713 52.381 0.00 0.00 38.79 3.06
112 113 2.414994 TCTCGGACCTCTACGAATGT 57.585 50.000 0.00 0.00 38.79 2.71
113 114 3.777465 TTTCTCGGACCTCTACGAATG 57.223 47.619 0.00 0.00 38.79 2.67
114 115 4.796038 TTTTTCTCGGACCTCTACGAAT 57.204 40.909 0.00 0.00 38.79 3.34
136 137 9.771534 TCTTTTTGGACCATCGATTTTAAATTT 57.228 25.926 0.00 0.00 0.00 1.82
137 138 9.203421 GTCTTTTTGGACCATCGATTTTAAATT 57.797 29.630 0.00 0.00 0.00 1.82
138 139 8.585018 AGTCTTTTTGGACCATCGATTTTAAAT 58.415 29.630 0.00 0.00 36.95 1.40
139 140 7.947282 AGTCTTTTTGGACCATCGATTTTAAA 58.053 30.769 0.00 0.00 36.95 1.52
140 141 7.519032 AGTCTTTTTGGACCATCGATTTTAA 57.481 32.000 0.00 0.00 36.95 1.52
141 142 8.801882 ATAGTCTTTTTGGACCATCGATTTTA 57.198 30.769 0.00 0.00 36.95 1.52
142 143 7.703058 ATAGTCTTTTTGGACCATCGATTTT 57.297 32.000 0.00 0.00 36.95 1.82
143 144 7.176690 ACAATAGTCTTTTTGGACCATCGATTT 59.823 33.333 0.00 0.00 36.95 2.17
144 145 6.659242 ACAATAGTCTTTTTGGACCATCGATT 59.341 34.615 0.00 0.00 36.95 3.34
145 146 6.180472 ACAATAGTCTTTTTGGACCATCGAT 58.820 36.000 0.00 0.00 36.95 3.59
146 147 5.556915 ACAATAGTCTTTTTGGACCATCGA 58.443 37.500 0.00 0.00 36.95 3.59
147 148 5.880054 ACAATAGTCTTTTTGGACCATCG 57.120 39.130 0.00 0.00 36.95 3.84
148 149 6.208599 TCCAACAATAGTCTTTTTGGACCATC 59.791 38.462 5.09 0.00 40.63 3.51
149 150 6.074648 TCCAACAATAGTCTTTTTGGACCAT 58.925 36.000 5.09 0.00 40.63 3.55
150 151 5.450453 TCCAACAATAGTCTTTTTGGACCA 58.550 37.500 5.09 0.00 40.63 4.02
151 152 6.399639 TTCCAACAATAGTCTTTTTGGACC 57.600 37.500 8.05 0.00 44.24 4.46
152 153 5.920840 GCTTCCAACAATAGTCTTTTTGGAC 59.079 40.000 8.05 0.00 44.24 4.02
153 154 5.596361 TGCTTCCAACAATAGTCTTTTTGGA 59.404 36.000 5.09 5.09 43.16 3.53
154 155 5.841810 TGCTTCCAACAATAGTCTTTTTGG 58.158 37.500 0.79 0.79 38.48 3.28
155 156 7.951530 AATGCTTCCAACAATAGTCTTTTTG 57.048 32.000 0.00 0.00 0.00 2.44
156 157 8.829612 CAAAATGCTTCCAACAATAGTCTTTTT 58.170 29.630 0.00 0.00 0.00 1.94
157 158 7.442062 CCAAAATGCTTCCAACAATAGTCTTTT 59.558 33.333 0.00 0.00 0.00 2.27
158 159 6.930722 CCAAAATGCTTCCAACAATAGTCTTT 59.069 34.615 0.00 0.00 0.00 2.52
159 160 6.267471 TCCAAAATGCTTCCAACAATAGTCTT 59.733 34.615 0.00 0.00 0.00 3.01
160 161 5.774690 TCCAAAATGCTTCCAACAATAGTCT 59.225 36.000 0.00 0.00 0.00 3.24
161 162 6.024552 TCCAAAATGCTTCCAACAATAGTC 57.975 37.500 0.00 0.00 0.00 2.59
162 163 5.567423 GCTCCAAAATGCTTCCAACAATAGT 60.567 40.000 0.00 0.00 0.00 2.12
163 164 4.866486 GCTCCAAAATGCTTCCAACAATAG 59.134 41.667 0.00 0.00 0.00 1.73
164 165 4.282957 TGCTCCAAAATGCTTCCAACAATA 59.717 37.500 0.00 0.00 0.00 1.90
165 166 3.071312 TGCTCCAAAATGCTTCCAACAAT 59.929 39.130 0.00 0.00 0.00 2.71
166 167 2.433604 TGCTCCAAAATGCTTCCAACAA 59.566 40.909 0.00 0.00 0.00 2.83
167 168 2.037901 TGCTCCAAAATGCTTCCAACA 58.962 42.857 0.00 0.00 0.00 3.33
168 169 2.818130 TGCTCCAAAATGCTTCCAAC 57.182 45.000 0.00 0.00 0.00 3.77
169 170 2.898612 TGATGCTCCAAAATGCTTCCAA 59.101 40.909 0.00 0.00 33.98 3.53
170 171 2.527497 TGATGCTCCAAAATGCTTCCA 58.473 42.857 0.00 0.00 33.98 3.53
171 172 3.598019 TTGATGCTCCAAAATGCTTCC 57.402 42.857 0.00 0.00 33.98 3.46
172 173 6.072893 ACAAAATTGATGCTCCAAAATGCTTC 60.073 34.615 0.00 0.00 35.02 3.86
173 174 5.766174 ACAAAATTGATGCTCCAAAATGCTT 59.234 32.000 0.00 0.00 0.00 3.91
174 175 5.310451 ACAAAATTGATGCTCCAAAATGCT 58.690 33.333 0.00 0.00 0.00 3.79
175 176 5.616488 ACAAAATTGATGCTCCAAAATGC 57.384 34.783 0.00 0.00 0.00 3.56
179 180 9.947669 CAAAAATAACAAAATTGATGCTCCAAA 57.052 25.926 0.00 0.00 0.00 3.28
180 181 8.074972 GCAAAAATAACAAAATTGATGCTCCAA 58.925 29.630 0.00 0.00 32.59 3.53
181 182 7.308469 GGCAAAAATAACAAAATTGATGCTCCA 60.308 33.333 0.00 0.00 34.31 3.86
182 183 7.022979 GGCAAAAATAACAAAATTGATGCTCC 58.977 34.615 0.00 0.00 34.31 4.70
183 184 7.022979 GGGCAAAAATAACAAAATTGATGCTC 58.977 34.615 0.00 0.00 34.31 4.26
184 185 6.489361 TGGGCAAAAATAACAAAATTGATGCT 59.511 30.769 0.00 0.00 34.31 3.79
185 186 6.675987 TGGGCAAAAATAACAAAATTGATGC 58.324 32.000 0.00 0.00 33.65 3.91
186 187 8.016801 GTCTGGGCAAAAATAACAAAATTGATG 58.983 33.333 0.00 0.00 0.00 3.07
187 188 7.174772 GGTCTGGGCAAAAATAACAAAATTGAT 59.825 33.333 0.00 0.00 0.00 2.57
188 189 6.484977 GGTCTGGGCAAAAATAACAAAATTGA 59.515 34.615 0.00 0.00 0.00 2.57
189 190 6.486320 AGGTCTGGGCAAAAATAACAAAATTG 59.514 34.615 0.00 0.00 0.00 2.32
190 191 6.600388 AGGTCTGGGCAAAAATAACAAAATT 58.400 32.000 0.00 0.00 0.00 1.82
191 192 6.186420 AGGTCTGGGCAAAAATAACAAAAT 57.814 33.333 0.00 0.00 0.00 1.82
192 193 5.454045 GGAGGTCTGGGCAAAAATAACAAAA 60.454 40.000 0.00 0.00 0.00 2.44
193 194 4.039852 GGAGGTCTGGGCAAAAATAACAAA 59.960 41.667 0.00 0.00 0.00 2.83
194 195 3.576550 GGAGGTCTGGGCAAAAATAACAA 59.423 43.478 0.00 0.00 0.00 2.83
195 196 3.161866 GGAGGTCTGGGCAAAAATAACA 58.838 45.455 0.00 0.00 0.00 2.41
196 197 3.161866 TGGAGGTCTGGGCAAAAATAAC 58.838 45.455 0.00 0.00 0.00 1.89
197 198 3.534357 TGGAGGTCTGGGCAAAAATAA 57.466 42.857 0.00 0.00 0.00 1.40
198 199 3.011144 TCATGGAGGTCTGGGCAAAAATA 59.989 43.478 0.00 0.00 0.00 1.40
199 200 2.181975 CATGGAGGTCTGGGCAAAAAT 58.818 47.619 0.00 0.00 0.00 1.82
200 201 1.146774 TCATGGAGGTCTGGGCAAAAA 59.853 47.619 0.00 0.00 0.00 1.94
201 202 0.776810 TCATGGAGGTCTGGGCAAAA 59.223 50.000 0.00 0.00 0.00 2.44
202 203 0.776810 TTCATGGAGGTCTGGGCAAA 59.223 50.000 0.00 0.00 0.00 3.68
203 204 1.002069 ATTCATGGAGGTCTGGGCAA 58.998 50.000 0.00 0.00 0.00 4.52
204 205 0.256752 CATTCATGGAGGTCTGGGCA 59.743 55.000 0.00 0.00 0.00 5.36
205 206 0.257039 ACATTCATGGAGGTCTGGGC 59.743 55.000 0.00 0.00 0.00 5.36
206 207 1.561076 TGACATTCATGGAGGTCTGGG 59.439 52.381 19.05 0.00 0.00 4.45
207 208 3.572632 ATGACATTCATGGAGGTCTGG 57.427 47.619 19.05 0.00 35.43 3.86
208 209 5.416639 TCAAAATGACATTCATGGAGGTCTG 59.583 40.000 19.05 9.47 37.15 3.51
209 210 5.416952 GTCAAAATGACATTCATGGAGGTCT 59.583 40.000 19.05 3.00 46.22 3.85
210 211 5.644644 GTCAAAATGACATTCATGGAGGTC 58.355 41.667 11.96 11.96 46.22 3.85
211 212 5.649782 GTCAAAATGACATTCATGGAGGT 57.350 39.130 0.05 0.00 46.22 3.85
223 224 7.464977 GCATGCAAAATATCAGGTCAAAATGAC 60.465 37.037 14.21 1.88 46.23 3.06
224 225 6.535865 GCATGCAAAATATCAGGTCAAAATGA 59.464 34.615 14.21 0.00 0.00 2.57
225 226 6.314152 TGCATGCAAAATATCAGGTCAAAATG 59.686 34.615 20.30 0.00 0.00 2.32
226 227 6.408035 TGCATGCAAAATATCAGGTCAAAAT 58.592 32.000 20.30 0.00 0.00 1.82
227 228 5.791666 TGCATGCAAAATATCAGGTCAAAA 58.208 33.333 20.30 0.00 0.00 2.44
228 229 5.047164 ACTGCATGCAAAATATCAGGTCAAA 60.047 36.000 22.88 0.00 0.00 2.69
229 230 4.463539 ACTGCATGCAAAATATCAGGTCAA 59.536 37.500 22.88 0.00 0.00 3.18
230 231 4.018490 ACTGCATGCAAAATATCAGGTCA 58.982 39.130 22.88 0.00 0.00 4.02
231 232 4.644103 ACTGCATGCAAAATATCAGGTC 57.356 40.909 22.88 0.00 0.00 3.85
232 233 5.887598 TCTAACTGCATGCAAAATATCAGGT 59.112 36.000 22.88 9.71 0.00 4.00
233 234 6.381481 TCTAACTGCATGCAAAATATCAGG 57.619 37.500 22.88 9.02 0.00 3.86
234 235 7.252708 TGTTCTAACTGCATGCAAAATATCAG 58.747 34.615 22.88 9.78 0.00 2.90
235 236 7.155655 TGTTCTAACTGCATGCAAAATATCA 57.844 32.000 22.88 12.44 0.00 2.15
236 237 8.638685 AATGTTCTAACTGCATGCAAAATATC 57.361 30.769 22.88 10.09 0.00 1.63
237 238 8.252417 TGAATGTTCTAACTGCATGCAAAATAT 58.748 29.630 22.88 11.26 0.00 1.28
238 239 7.600960 TGAATGTTCTAACTGCATGCAAAATA 58.399 30.769 22.88 13.30 0.00 1.40
239 240 6.457355 TGAATGTTCTAACTGCATGCAAAAT 58.543 32.000 22.88 12.85 0.00 1.82
240 241 5.840715 TGAATGTTCTAACTGCATGCAAAA 58.159 33.333 22.88 8.89 0.00 2.44
241 242 5.450592 TGAATGTTCTAACTGCATGCAAA 57.549 34.783 22.88 9.87 0.00 3.68
242 243 5.183522 TGATGAATGTTCTAACTGCATGCAA 59.816 36.000 22.88 6.07 32.53 4.08
243 244 4.701171 TGATGAATGTTCTAACTGCATGCA 59.299 37.500 21.29 21.29 33.22 3.96
244 245 5.239359 TGATGAATGTTCTAACTGCATGC 57.761 39.130 11.82 11.82 0.00 4.06
245 246 7.679659 CATTGATGAATGTTCTAACTGCATG 57.320 36.000 0.00 0.00 35.19 4.06
258 259 7.943413 TTGTTGTGGTAAACATTGATGAATG 57.057 32.000 3.09 3.09 44.11 2.67
259 260 8.954950 TTTTGTTGTGGTAAACATTGATGAAT 57.045 26.923 0.00 0.00 39.68 2.57
260 261 8.777865 TTTTTGTTGTGGTAAACATTGATGAA 57.222 26.923 0.00 0.00 39.68 2.57
261 262 8.954950 ATTTTTGTTGTGGTAAACATTGATGA 57.045 26.923 0.00 0.00 39.68 2.92
262 263 9.435802 CAATTTTTGTTGTGGTAAACATTGATG 57.564 29.630 0.00 0.00 39.68 3.07
263 264 9.388506 TCAATTTTTGTTGTGGTAAACATTGAT 57.611 25.926 0.00 0.00 37.72 2.57
264 265 8.777865 TCAATTTTTGTTGTGGTAAACATTGA 57.222 26.923 0.00 0.00 39.08 2.57
265 266 8.877779 TCTCAATTTTTGTTGTGGTAAACATTG 58.122 29.630 0.00 0.00 39.68 2.82
266 267 9.612066 ATCTCAATTTTTGTTGTGGTAAACATT 57.388 25.926 0.00 0.00 39.68 2.71
267 268 9.612066 AATCTCAATTTTTGTTGTGGTAAACAT 57.388 25.926 0.00 0.00 39.68 2.71
268 269 9.442047 AAATCTCAATTTTTGTTGTGGTAAACA 57.558 25.926 0.00 0.00 38.26 2.83
314 315 7.495901 TCCTGCATGAACAGTAAAATCAAAAA 58.504 30.769 0.00 0.00 35.83 1.94
315 316 7.048629 TCCTGCATGAACAGTAAAATCAAAA 57.951 32.000 0.00 0.00 35.83 2.44
316 317 6.647334 TCCTGCATGAACAGTAAAATCAAA 57.353 33.333 0.00 0.00 35.83 2.69
317 318 5.335897 GCTCCTGCATGAACAGTAAAATCAA 60.336 40.000 0.00 0.00 39.41 2.57
318 319 4.156556 GCTCCTGCATGAACAGTAAAATCA 59.843 41.667 0.00 0.00 39.41 2.57
319 320 4.156556 TGCTCCTGCATGAACAGTAAAATC 59.843 41.667 0.00 0.00 45.31 2.17
320 321 4.081406 TGCTCCTGCATGAACAGTAAAAT 58.919 39.130 0.00 0.00 45.31 1.82
321 322 3.485394 TGCTCCTGCATGAACAGTAAAA 58.515 40.909 0.00 0.00 45.31 1.52
322 323 3.138884 TGCTCCTGCATGAACAGTAAA 57.861 42.857 0.00 0.00 45.31 2.01
323 324 2.857186 TGCTCCTGCATGAACAGTAA 57.143 45.000 0.00 0.00 45.31 2.24
340 341 2.462456 TTCATCCCGAGCTCATATGC 57.538 50.000 15.40 0.00 0.00 3.14
341 342 4.635223 TCTTTTCATCCCGAGCTCATATG 58.365 43.478 15.40 13.21 0.00 1.78
342 343 4.802248 GCTCTTTTCATCCCGAGCTCATAT 60.802 45.833 15.40 0.29 44.04 1.78
343 344 3.493350 GCTCTTTTCATCCCGAGCTCATA 60.493 47.826 15.40 0.00 44.04 2.15
344 345 2.744494 GCTCTTTTCATCCCGAGCTCAT 60.744 50.000 15.40 0.00 44.04 2.90
345 346 1.406069 GCTCTTTTCATCCCGAGCTCA 60.406 52.381 15.40 0.00 44.04 4.26
346 347 1.294857 GCTCTTTTCATCCCGAGCTC 58.705 55.000 2.73 2.73 44.04 4.09
347 348 0.615331 TGCTCTTTTCATCCCGAGCT 59.385 50.000 10.89 0.00 46.70 4.09
348 349 0.729690 GTGCTCTTTTCATCCCGAGC 59.270 55.000 0.00 0.00 46.74 5.03
349 350 2.393271 AGTGCTCTTTTCATCCCGAG 57.607 50.000 0.00 0.00 0.00 4.63
350 351 2.859165 AAGTGCTCTTTTCATCCCGA 57.141 45.000 0.00 0.00 0.00 5.14
351 352 2.159653 CGAAAGTGCTCTTTTCATCCCG 60.160 50.000 14.50 8.82 42.99 5.14
352 353 2.162408 CCGAAAGTGCTCTTTTCATCCC 59.838 50.000 14.50 1.09 42.99 3.85
353 354 2.814336 ACCGAAAGTGCTCTTTTCATCC 59.186 45.455 14.50 1.73 42.99 3.51
354 355 3.748568 AGACCGAAAGTGCTCTTTTCATC 59.251 43.478 14.50 11.65 42.99 2.92
355 356 3.744660 AGACCGAAAGTGCTCTTTTCAT 58.255 40.909 14.50 3.97 42.99 2.57
356 357 3.194005 AGACCGAAAGTGCTCTTTTCA 57.806 42.857 14.50 0.00 42.99 2.69
357 358 4.308265 AGTAGACCGAAAGTGCTCTTTTC 58.692 43.478 14.50 8.82 42.99 2.29
358 359 4.308265 GAGTAGACCGAAAGTGCTCTTTT 58.692 43.478 14.50 0.00 42.99 2.27
359 360 3.306156 GGAGTAGACCGAAAGTGCTCTTT 60.306 47.826 13.33 13.33 45.24 2.52
360 361 2.231721 GGAGTAGACCGAAAGTGCTCTT 59.768 50.000 0.00 0.00 35.14 2.85
361 362 1.819903 GGAGTAGACCGAAAGTGCTCT 59.180 52.381 0.00 0.00 0.00 4.09
362 363 1.819903 AGGAGTAGACCGAAAGTGCTC 59.180 52.381 0.00 0.00 34.73 4.26
363 364 1.926108 AGGAGTAGACCGAAAGTGCT 58.074 50.000 0.00 0.00 34.73 4.40
364 365 2.029290 TCAAGGAGTAGACCGAAAGTGC 60.029 50.000 0.00 0.00 34.73 4.40
365 366 3.936372 TCAAGGAGTAGACCGAAAGTG 57.064 47.619 0.00 0.00 34.73 3.16
366 367 4.773149 AGAATCAAGGAGTAGACCGAAAGT 59.227 41.667 0.00 0.00 34.73 2.66
367 368 5.331876 AGAATCAAGGAGTAGACCGAAAG 57.668 43.478 0.00 0.00 34.73 2.62
368 369 5.740290 AAGAATCAAGGAGTAGACCGAAA 57.260 39.130 0.00 0.00 34.73 3.46
369 370 5.480772 AGAAAGAATCAAGGAGTAGACCGAA 59.519 40.000 0.00 0.00 34.73 4.30
370 371 5.017490 AGAAAGAATCAAGGAGTAGACCGA 58.983 41.667 0.00 0.00 34.73 4.69
371 372 5.331876 AGAAAGAATCAAGGAGTAGACCG 57.668 43.478 0.00 0.00 34.73 4.79
372 373 7.842982 ACTAAGAAAGAATCAAGGAGTAGACC 58.157 38.462 0.00 0.00 0.00 3.85
378 379 7.616313 AGTGGTACTAAGAAAGAATCAAGGAG 58.384 38.462 0.00 0.00 0.00 3.69
391 392 6.726490 AGTGACAAAAGAGTGGTACTAAGA 57.274 37.500 0.00 0.00 0.00 2.10
393 394 9.669887 TTTAAAGTGACAAAAGAGTGGTACTAA 57.330 29.630 0.00 0.00 0.00 2.24
430 431 3.436577 AGACTCAAAGAGTAGACGGGA 57.563 47.619 0.00 0.00 43.53 5.14
438 439 7.726033 ATGGTACTATGAAGACTCAAAGAGT 57.274 36.000 0.00 0.00 46.42 3.24
458 459 3.208747 AGAACGTGACAAAGGAATGGT 57.791 42.857 0.00 0.00 0.00 3.55
487 488 7.768120 ACCTCTGAGATTGAAGCTTACATTTAG 59.232 37.037 6.17 0.00 0.00 1.85
490 491 6.059787 ACCTCTGAGATTGAAGCTTACATT 57.940 37.500 6.17 0.00 0.00 2.71
493 494 9.771534 ATTATAACCTCTGAGATTGAAGCTTAC 57.228 33.333 6.17 0.00 0.00 2.34
497 498 9.213799 CCTAATTATAACCTCTGAGATTGAAGC 57.786 37.037 6.17 0.00 0.00 3.86
507 508 5.368523 TGGTGGGTCCTAATTATAACCTCTG 59.631 44.000 13.33 0.00 37.07 3.35
508 509 5.368816 GTGGTGGGTCCTAATTATAACCTCT 59.631 44.000 13.33 0.00 37.07 3.69
524 525 6.269769 ACAAATCATTTGATTAAGTGGTGGGT 59.730 34.615 17.30 0.00 43.41 4.51
526 527 7.377398 TGACAAATCATTTGATTAAGTGGTGG 58.623 34.615 17.30 0.00 43.41 4.61
529 530 7.762615 AGCATGACAAATCATTTGATTAAGTGG 59.237 33.333 17.30 0.00 43.40 4.00
530 531 8.697846 AGCATGACAAATCATTTGATTAAGTG 57.302 30.769 17.30 7.49 43.40 3.16
542 543 7.936496 TTTAGTGGATAAGCATGACAAATCA 57.064 32.000 0.00 0.00 39.83 2.57
545 546 8.584157 ACAAATTTAGTGGATAAGCATGACAAA 58.416 29.630 0.00 0.00 0.00 2.83
546 547 8.121305 ACAAATTTAGTGGATAAGCATGACAA 57.879 30.769 0.00 0.00 0.00 3.18
547 548 7.701539 ACAAATTTAGTGGATAAGCATGACA 57.298 32.000 0.00 0.00 0.00 3.58
550 551 9.683069 GGATAACAAATTTAGTGGATAAGCATG 57.317 33.333 0.00 0.00 0.00 4.06
559 722 5.949354 TGACAGGGGATAACAAATTTAGTGG 59.051 40.000 0.00 0.00 0.00 4.00
564 727 8.485578 TTTACTTGACAGGGGATAACAAATTT 57.514 30.769 0.00 0.00 0.00 1.82
566 729 7.728532 AGTTTTACTTGACAGGGGATAACAAAT 59.271 33.333 0.00 0.00 0.00 2.32
570 733 6.002082 ACAGTTTTACTTGACAGGGGATAAC 58.998 40.000 0.00 0.00 0.00 1.89
571 734 6.183361 TGACAGTTTTACTTGACAGGGGATAA 60.183 38.462 0.00 0.00 0.00 1.75
573 736 4.104102 TGACAGTTTTACTTGACAGGGGAT 59.896 41.667 0.00 0.00 0.00 3.85
574 737 3.456644 TGACAGTTTTACTTGACAGGGGA 59.543 43.478 0.00 0.00 0.00 4.81
575 738 3.564225 GTGACAGTTTTACTTGACAGGGG 59.436 47.826 0.00 0.00 0.00 4.79
576 739 4.196193 TGTGACAGTTTTACTTGACAGGG 58.804 43.478 0.00 0.00 0.00 4.45
577 740 5.811399 TTGTGACAGTTTTACTTGACAGG 57.189 39.130 0.00 0.00 0.00 4.00
599 762 5.812642 TGCACATGGTAAAATGAACGTTTTT 59.187 32.000 0.46 1.63 33.62 1.94
605 768 4.444056 GTGTGTGCACATGGTAAAATGAAC 59.556 41.667 24.69 5.53 43.97 3.18
607 770 4.235939 GTGTGTGCACATGGTAAAATGA 57.764 40.909 24.69 0.00 43.97 2.57
619 782 0.301687 CTGACGTCAAGTGTGTGCAC 59.698 55.000 20.49 10.75 45.57 4.57
621 784 0.810031 ACCTGACGTCAAGTGTGTGC 60.810 55.000 18.74 0.00 0.00 4.57
622 785 2.124903 GTACCTGACGTCAAGTGTGTG 58.875 52.381 26.30 10.46 0.00 3.82
623 786 1.752498 TGTACCTGACGTCAAGTGTGT 59.248 47.619 26.30 16.61 0.00 3.72
624 787 2.502213 TGTACCTGACGTCAAGTGTG 57.498 50.000 26.30 11.85 0.00 3.82
625 788 4.461431 TCATATGTACCTGACGTCAAGTGT 59.539 41.667 26.30 20.87 0.00 3.55
626 789 4.993905 TCATATGTACCTGACGTCAAGTG 58.006 43.478 26.30 16.73 0.00 3.16
630 793 7.102847 TGTATTTCATATGTACCTGACGTCA 57.897 36.000 18.88 18.88 0.00 4.35
632 795 8.826710 CATTTGTATTTCATATGTACCTGACGT 58.173 33.333 1.90 0.00 33.13 4.34
633 796 8.826710 ACATTTGTATTTCATATGTACCTGACG 58.173 33.333 1.90 0.00 43.29 4.35
634 797 9.935682 CACATTTGTATTTCATATGTACCTGAC 57.064 33.333 1.90 0.00 43.26 3.51
635 798 9.119418 CCACATTTGTATTTCATATGTACCTGA 57.881 33.333 1.90 0.00 43.26 3.86
636 799 7.862372 GCCACATTTGTATTTCATATGTACCTG 59.138 37.037 1.90 0.25 43.26 4.00
637 800 7.255104 CGCCACATTTGTATTTCATATGTACCT 60.255 37.037 1.90 0.00 43.26 3.08
638 801 6.855914 CGCCACATTTGTATTTCATATGTACC 59.144 38.462 1.90 0.00 43.26 3.34
639 802 6.359617 GCGCCACATTTGTATTTCATATGTAC 59.640 38.462 0.00 0.00 43.26 2.90
642 836 5.522456 AGCGCCACATTTGTATTTCATATG 58.478 37.500 2.29 0.00 39.94 1.78
647 841 3.764885 AGAGCGCCACATTTGTATTTC 57.235 42.857 2.29 0.00 0.00 2.17
655 849 2.472695 TGTTCTTAGAGCGCCACATT 57.527 45.000 2.29 0.00 0.00 2.71
703 898 6.986250 TGTCATAATCAAGCATCTCTATCGT 58.014 36.000 0.00 0.00 0.00 3.73
704 899 7.383300 TGTTGTCATAATCAAGCATCTCTATCG 59.617 37.037 0.00 0.00 0.00 2.92
713 908 5.221204 TGCACTTTGTTGTCATAATCAAGCA 60.221 36.000 0.00 0.00 0.00 3.91
724 919 3.311106 CATGTGGATGCACTTTGTTGTC 58.689 45.455 18.75 0.00 0.00 3.18
768 963 2.695666 GCCAGTGCTTCTGTCCTAGATA 59.304 50.000 0.00 0.00 42.19 1.98
901 3212 9.582431 GGTACGTGCATGATGTATTTATATACT 57.418 33.333 14.17 0.00 37.97 2.12
902 3213 9.582431 AGGTACGTGCATGATGTATTTATATAC 57.418 33.333 14.17 0.00 37.68 1.47
989 3300 1.078918 CAAGCCATGAGGTCGCTCA 60.079 57.895 0.00 0.00 37.19 4.26
1017 3328 3.069016 TGACCACCACAAGTACACTACAG 59.931 47.826 0.00 0.00 0.00 2.74
1075 3401 4.593864 GAGATGGTCGCCGGAGCC 62.594 72.222 5.05 8.86 39.95 4.70
1076 3402 3.838271 TGAGATGGTCGCCGGAGC 61.838 66.667 5.05 0.00 41.07 4.70
1077 3403 2.105128 GTGAGATGGTCGCCGGAG 59.895 66.667 5.05 0.00 0.00 4.63
1251 3577 3.307505 CTTGATTTCGGTGCGCGCA 62.308 57.895 33.09 33.09 0.00 6.09
1263 3589 4.745125 CGCCTACATACGTTGATCTTGATT 59.255 41.667 0.00 0.00 0.00 2.57
1312 3642 5.001232 GGCGCAAAAGGAGGATATGTTATA 58.999 41.667 10.83 0.00 0.00 0.98
1313 3643 3.821033 GGCGCAAAAGGAGGATATGTTAT 59.179 43.478 10.83 0.00 0.00 1.89
1314 3644 3.211045 GGCGCAAAAGGAGGATATGTTA 58.789 45.455 10.83 0.00 0.00 2.41
1317 3647 0.954452 GGGCGCAAAAGGAGGATATG 59.046 55.000 10.83 0.00 0.00 1.78
1573 3912 3.044305 GTGGGCGAGCACACTGTC 61.044 66.667 21.82 0.00 46.10 3.51
1824 4163 0.996462 ATCATCAAACGGCGTACACG 59.004 50.000 15.20 1.85 43.27 4.49
1854 4193 6.918892 AACTGAAATTAAAACCAAGGTTGC 57.081 33.333 5.06 0.00 38.47 4.17
1870 4209 8.504005 GGAGTCGAATTATTTCTGAAACTGAAA 58.496 33.333 4.73 0.00 36.18 2.69
1871 4210 7.878127 AGGAGTCGAATTATTTCTGAAACTGAA 59.122 33.333 4.73 1.13 0.00 3.02
1872 4211 7.386851 AGGAGTCGAATTATTTCTGAAACTGA 58.613 34.615 4.73 0.00 0.00 3.41
1873 4212 7.602517 AGGAGTCGAATTATTTCTGAAACTG 57.397 36.000 4.73 0.00 0.00 3.16
1874 4213 7.764901 GGTAGGAGTCGAATTATTTCTGAAACT 59.235 37.037 4.73 0.00 0.00 2.66
1881 4220 8.265165 AGTTTTGGTAGGAGTCGAATTATTTC 57.735 34.615 0.00 0.00 0.00 2.17
1883 4222 7.767659 GGTAGTTTTGGTAGGAGTCGAATTATT 59.232 37.037 0.00 0.00 0.00 1.40
1884 4223 7.270779 GGTAGTTTTGGTAGGAGTCGAATTAT 58.729 38.462 0.00 0.00 0.00 1.28
1886 4225 5.485620 GGTAGTTTTGGTAGGAGTCGAATT 58.514 41.667 0.00 0.00 0.00 2.17
1888 4227 3.057315 CGGTAGTTTTGGTAGGAGTCGAA 60.057 47.826 0.00 0.00 0.00 3.71
1894 4233 4.344679 TCAACTTCGGTAGTTTTGGTAGGA 59.655 41.667 0.00 0.00 44.73 2.94
1901 4240 6.540914 TCATCAAACTCAACTTCGGTAGTTTT 59.459 34.615 0.00 0.00 44.73 2.43
1914 4253 9.022884 TCATGGTTATCAAATCATCAAACTCAA 57.977 29.630 0.00 0.00 34.05 3.02
1979 4325 4.722361 TTAACACACACCAAAGGGAAAC 57.278 40.909 0.00 0.00 38.05 2.78
2011 4364 2.037901 ACCATCGATCTCATCACAGCT 58.962 47.619 0.00 0.00 0.00 4.24
2083 4436 2.821366 CCGGCACAGCTCATCACC 60.821 66.667 0.00 0.00 0.00 4.02
2084 4437 2.046892 ACCGGCACAGCTCATCAC 60.047 61.111 0.00 0.00 0.00 3.06
2197 4570 8.721019 AAATGTTGCCATTTAGTTTGATATGG 57.279 30.769 0.00 0.00 46.80 2.74
2276 4650 9.710900 TTATCACATATGTCACATGATAGGAAC 57.289 33.333 5.07 0.00 34.60 3.62
2278 4652 8.037166 GCTTATCACATATGTCACATGATAGGA 58.963 37.037 18.65 6.98 34.60 2.94
2280 4654 8.767478 TGCTTATCACATATGTCACATGATAG 57.233 34.615 5.07 5.68 34.60 2.08
2283 4657 8.454570 AATTGCTTATCACATATGTCACATGA 57.545 30.769 5.07 0.00 0.00 3.07
2321 4695 7.750903 GTCAGTGTAAGAATTAGCATTGGTTTC 59.249 37.037 0.00 0.00 0.00 2.78
2323 4697 6.151144 GGTCAGTGTAAGAATTAGCATTGGTT 59.849 38.462 0.00 0.00 0.00 3.67
2324 4698 5.648092 GGTCAGTGTAAGAATTAGCATTGGT 59.352 40.000 0.00 0.00 0.00 3.67
2331 4705 7.538678 GCATTGTTTGGTCAGTGTAAGAATTAG 59.461 37.037 0.00 0.00 0.00 1.73
2334 4708 5.536161 AGCATTGTTTGGTCAGTGTAAGAAT 59.464 36.000 0.00 0.00 0.00 2.40
2345 4719 9.807649 ATCTTAATCAATTAGCATTGTTTGGTC 57.192 29.630 4.24 0.00 40.78 4.02
2416 4987 2.503356 ACAAAAATGTTGGACAAGCCCA 59.497 40.909 0.00 0.00 34.97 5.36
2438 5009 8.690203 TTCCATTCAAATTGAGAAAGTACTCA 57.310 30.769 0.00 0.00 43.83 3.41
2454 5025 4.402155 GCCATGTAGGACAATTCCATTCAA 59.598 41.667 0.00 0.00 45.72 2.69
2472 5043 6.053632 TGAGGGATGTACTATTATGCCATG 57.946 41.667 4.60 0.00 37.27 3.66
2477 5048 6.114187 TGGCTTGAGGGATGTACTATTATG 57.886 41.667 0.00 0.00 0.00 1.90
2497 5068 0.957888 GAGGAAGTCTTGTGGCTGGC 60.958 60.000 0.00 0.00 0.00 4.85
2508 5079 1.758906 CGGGAGGAGGGAGGAAGTC 60.759 68.421 0.00 0.00 0.00 3.01
2527 5098 7.934665 TCTTCTAGTTTGCAGTAAAATACCACA 59.065 33.333 0.00 0.00 0.00 4.17
2528 5099 8.319143 TCTTCTAGTTTGCAGTAAAATACCAC 57.681 34.615 0.00 0.00 0.00 4.16
2537 5108 3.323243 GGCGTTCTTCTAGTTTGCAGTA 58.677 45.455 0.00 0.00 0.00 2.74
2546 5117 3.782042 GCACGGGCGTTCTTCTAG 58.218 61.111 0.00 0.00 0.00 2.43
2564 5135 1.528292 TAATGTGGCCCCGTTGCAAC 61.528 55.000 19.89 19.89 35.65 4.17
2565 5136 0.827925 TTAATGTGGCCCCGTTGCAA 60.828 50.000 0.00 0.00 0.00 4.08
2566 5137 1.228583 TTAATGTGGCCCCGTTGCA 60.229 52.632 0.00 0.00 0.00 4.08
2567 5138 1.214325 GTTAATGTGGCCCCGTTGC 59.786 57.895 0.00 0.00 0.00 4.17
2568 5139 1.253100 AAGTTAATGTGGCCCCGTTG 58.747 50.000 0.00 0.00 0.00 4.10
2569 5140 2.003937 AAAGTTAATGTGGCCCCGTT 57.996 45.000 0.00 0.00 0.00 4.44
2570 5141 2.883122 TAAAGTTAATGTGGCCCCGT 57.117 45.000 0.00 0.00 0.00 5.28
2571 5142 3.086282 ACTTAAAGTTAATGTGGCCCCG 58.914 45.455 0.00 0.00 0.00 5.73
2572 5143 3.830178 ACACTTAAAGTTAATGTGGCCCC 59.170 43.478 0.00 0.00 31.79 5.80
2573 5144 5.010213 TGAACACTTAAAGTTAATGTGGCCC 59.990 40.000 0.00 0.00 31.79 5.80
2574 5145 6.079424 TGAACACTTAAAGTTAATGTGGCC 57.921 37.500 0.00 0.00 31.79 5.36
2575 5146 9.855021 ATATTGAACACTTAAAGTTAATGTGGC 57.145 29.630 13.25 8.42 31.79 5.01
2626 5197 9.971922 CAGTGTCACTTGATATGTATGAGAATA 57.028 33.333 1.67 0.00 0.00 1.75
2627 5198 7.930325 CCAGTGTCACTTGATATGTATGAGAAT 59.070 37.037 1.67 0.00 0.00 2.40
2628 5199 7.267857 CCAGTGTCACTTGATATGTATGAGAA 58.732 38.462 1.67 0.00 0.00 2.87
2629 5200 6.683861 GCCAGTGTCACTTGATATGTATGAGA 60.684 42.308 8.22 0.00 0.00 3.27
2630 5201 5.464722 GCCAGTGTCACTTGATATGTATGAG 59.535 44.000 8.22 0.00 0.00 2.90
2631 5202 5.359756 GCCAGTGTCACTTGATATGTATGA 58.640 41.667 8.22 0.00 0.00 2.15
2632 5203 4.209911 CGCCAGTGTCACTTGATATGTATG 59.790 45.833 8.22 0.00 0.00 2.39
2633 5204 4.099419 TCGCCAGTGTCACTTGATATGTAT 59.901 41.667 8.22 0.00 0.00 2.29
2634 5205 3.445805 TCGCCAGTGTCACTTGATATGTA 59.554 43.478 8.22 0.00 0.00 2.29
2635 5206 2.233676 TCGCCAGTGTCACTTGATATGT 59.766 45.455 8.22 0.00 0.00 2.29
2636 5207 2.604914 GTCGCCAGTGTCACTTGATATG 59.395 50.000 8.22 0.00 0.00 1.78
2637 5208 2.418746 GGTCGCCAGTGTCACTTGATAT 60.419 50.000 8.22 0.00 0.00 1.63
2638 5209 1.067142 GGTCGCCAGTGTCACTTGATA 60.067 52.381 8.22 0.00 0.00 2.15
2639 5210 0.320771 GGTCGCCAGTGTCACTTGAT 60.321 55.000 8.22 0.00 0.00 2.57
2640 5211 1.069090 GGTCGCCAGTGTCACTTGA 59.931 57.895 8.22 2.16 0.00 3.02
2641 5212 0.532862 AAGGTCGCCAGTGTCACTTG 60.533 55.000 1.67 0.51 0.00 3.16
2642 5213 0.180406 AAAGGTCGCCAGTGTCACTT 59.820 50.000 1.67 0.00 0.00 3.16
2643 5214 0.180406 AAAAGGTCGCCAGTGTCACT 59.820 50.000 0.00 0.00 0.00 3.41
2644 5215 1.021968 AAAAAGGTCGCCAGTGTCAC 58.978 50.000 0.00 0.00 0.00 3.67
2645 5216 3.487576 AAAAAGGTCGCCAGTGTCA 57.512 47.368 0.00 0.00 0.00 3.58
2660 5231 6.071334 TGTGTGTGAGGTTTTGATGGTAAAAA 60.071 34.615 0.00 0.00 31.92 1.94
2661 5232 5.419155 TGTGTGTGAGGTTTTGATGGTAAAA 59.581 36.000 0.00 0.00 0.00 1.52
2662 5233 4.950475 TGTGTGTGAGGTTTTGATGGTAAA 59.050 37.500 0.00 0.00 0.00 2.01
2663 5234 4.527944 TGTGTGTGAGGTTTTGATGGTAA 58.472 39.130 0.00 0.00 0.00 2.85
2664 5235 4.157849 TGTGTGTGAGGTTTTGATGGTA 57.842 40.909 0.00 0.00 0.00 3.25
2665 5236 3.011566 TGTGTGTGAGGTTTTGATGGT 57.988 42.857 0.00 0.00 0.00 3.55
2666 5237 4.518590 TGTATGTGTGTGAGGTTTTGATGG 59.481 41.667 0.00 0.00 0.00 3.51
2667 5238 5.239306 AGTGTATGTGTGTGAGGTTTTGATG 59.761 40.000 0.00 0.00 0.00 3.07
2668 5239 5.376625 AGTGTATGTGTGTGAGGTTTTGAT 58.623 37.500 0.00 0.00 0.00 2.57
2669 5240 4.776349 AGTGTATGTGTGTGAGGTTTTGA 58.224 39.130 0.00 0.00 0.00 2.69
2670 5241 4.816385 AGAGTGTATGTGTGTGAGGTTTTG 59.184 41.667 0.00 0.00 0.00 2.44
2671 5242 5.036117 AGAGTGTATGTGTGTGAGGTTTT 57.964 39.130 0.00 0.00 0.00 2.43
2672 5243 4.503296 GGAGAGTGTATGTGTGTGAGGTTT 60.503 45.833 0.00 0.00 0.00 3.27
2673 5244 3.006967 GGAGAGTGTATGTGTGTGAGGTT 59.993 47.826 0.00 0.00 0.00 3.50
2674 5245 2.563179 GGAGAGTGTATGTGTGTGAGGT 59.437 50.000 0.00 0.00 0.00 3.85
2675 5246 2.416027 CGGAGAGTGTATGTGTGTGAGG 60.416 54.545 0.00 0.00 0.00 3.86
2676 5247 2.229062 ACGGAGAGTGTATGTGTGTGAG 59.771 50.000 0.00 0.00 0.00 3.51
2677 5248 2.235891 ACGGAGAGTGTATGTGTGTGA 58.764 47.619 0.00 0.00 0.00 3.58
2678 5249 2.724977 ACGGAGAGTGTATGTGTGTG 57.275 50.000 0.00 0.00 0.00 3.82
2679 5250 2.490903 GGTACGGAGAGTGTATGTGTGT 59.509 50.000 0.00 0.00 0.00 3.72
2680 5251 2.753452 AGGTACGGAGAGTGTATGTGTG 59.247 50.000 0.00 0.00 0.00 3.82
2681 5252 3.015327 GAGGTACGGAGAGTGTATGTGT 58.985 50.000 0.00 0.00 0.00 3.72
2682 5253 3.280295 AGAGGTACGGAGAGTGTATGTG 58.720 50.000 0.00 0.00 0.00 3.21
2683 5254 3.648507 AGAGGTACGGAGAGTGTATGT 57.351 47.619 0.00 0.00 0.00 2.29
2684 5255 3.315749 GGAAGAGGTACGGAGAGTGTATG 59.684 52.174 0.00 0.00 0.00 2.39
2685 5256 3.202595 AGGAAGAGGTACGGAGAGTGTAT 59.797 47.826 0.00 0.00 0.00 2.29
2686 5257 2.575279 AGGAAGAGGTACGGAGAGTGTA 59.425 50.000 0.00 0.00 0.00 2.90
2687 5258 1.355043 AGGAAGAGGTACGGAGAGTGT 59.645 52.381 0.00 0.00 0.00 3.55
2688 5259 2.018515 GAGGAAGAGGTACGGAGAGTG 58.981 57.143 0.00 0.00 0.00 3.51
2689 5260 1.634459 TGAGGAAGAGGTACGGAGAGT 59.366 52.381 0.00 0.00 0.00 3.24
2690 5261 2.018515 GTGAGGAAGAGGTACGGAGAG 58.981 57.143 0.00 0.00 0.00 3.20
2691 5262 1.634459 AGTGAGGAAGAGGTACGGAGA 59.366 52.381 0.00 0.00 0.00 3.71
2692 5263 2.018515 GAGTGAGGAAGAGGTACGGAG 58.981 57.143 0.00 0.00 0.00 4.63
2693 5264 1.634459 AGAGTGAGGAAGAGGTACGGA 59.366 52.381 0.00 0.00 0.00 4.69
2694 5265 2.018515 GAGAGTGAGGAAGAGGTACGG 58.981 57.143 0.00 0.00 0.00 4.02
2695 5266 2.940410 GAGAGAGTGAGGAAGAGGTACG 59.060 54.545 0.00 0.00 0.00 3.67
2696 5267 4.196971 GAGAGAGAGTGAGGAAGAGGTAC 58.803 52.174 0.00 0.00 0.00 3.34
2697 5268 3.201266 GGAGAGAGAGTGAGGAAGAGGTA 59.799 52.174 0.00 0.00 0.00 3.08
2698 5269 2.025321 GGAGAGAGAGTGAGGAAGAGGT 60.025 54.545 0.00 0.00 0.00 3.85
2699 5270 2.654863 GGAGAGAGAGTGAGGAAGAGG 58.345 57.143 0.00 0.00 0.00 3.69
2700 5271 2.654863 GGGAGAGAGAGTGAGGAAGAG 58.345 57.143 0.00 0.00 0.00 2.85
2701 5272 1.286553 GGGGAGAGAGAGTGAGGAAGA 59.713 57.143 0.00 0.00 0.00 2.87
2702 5273 1.687996 GGGGGAGAGAGAGTGAGGAAG 60.688 61.905 0.00 0.00 0.00 3.46
2703 5274 0.336737 GGGGGAGAGAGAGTGAGGAA 59.663 60.000 0.00 0.00 0.00 3.36
2704 5275 0.553862 AGGGGGAGAGAGAGTGAGGA 60.554 60.000 0.00 0.00 0.00 3.71
2705 5276 0.106217 GAGGGGGAGAGAGAGTGAGG 60.106 65.000 0.00 0.00 0.00 3.86
2706 5277 0.926293 AGAGGGGGAGAGAGAGTGAG 59.074 60.000 0.00 0.00 0.00 3.51
2707 5278 0.923358 GAGAGGGGGAGAGAGAGTGA 59.077 60.000 0.00 0.00 0.00 3.41
2708 5279 0.926293 AGAGAGGGGGAGAGAGAGTG 59.074 60.000 0.00 0.00 0.00 3.51
2709 5280 1.222567 GAGAGAGGGGGAGAGAGAGT 58.777 60.000 0.00 0.00 0.00 3.24
2710 5281 0.478507 GGAGAGAGGGGGAGAGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
2711 5282 0.996762 GGGAGAGAGGGGGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
2712 5283 1.541672 GGGAGAGAGGGGGAGAGAG 59.458 68.421 0.00 0.00 0.00 3.20
2713 5284 2.015726 GGGGAGAGAGGGGGAGAGA 61.016 68.421 0.00 0.00 0.00 3.10
2714 5285 2.612251 GGGGAGAGAGGGGGAGAG 59.388 72.222 0.00 0.00 0.00 3.20
2715 5286 3.036959 GGGGGAGAGAGGGGGAGA 61.037 72.222 0.00 0.00 0.00 3.71
2730 5301 2.512056 TGTTAGAGAGAGAGAGAGGGGG 59.488 54.545 0.00 0.00 0.00 5.40
2731 5302 3.053991 TGTGTTAGAGAGAGAGAGAGGGG 60.054 52.174 0.00 0.00 0.00 4.79
2732 5303 3.945285 GTGTGTTAGAGAGAGAGAGAGGG 59.055 52.174 0.00 0.00 0.00 4.30
2733 5304 4.394920 GTGTGTGTTAGAGAGAGAGAGAGG 59.605 50.000 0.00 0.00 0.00 3.69
2734 5305 5.000591 TGTGTGTGTTAGAGAGAGAGAGAG 58.999 45.833 0.00 0.00 0.00 3.20
2735 5306 4.757657 GTGTGTGTGTTAGAGAGAGAGAGA 59.242 45.833 0.00 0.00 0.00 3.10
2736 5307 4.517075 TGTGTGTGTGTTAGAGAGAGAGAG 59.483 45.833 0.00 0.00 0.00 3.20
2737 5308 4.461198 TGTGTGTGTGTTAGAGAGAGAGA 58.539 43.478 0.00 0.00 0.00 3.10
2738 5309 4.837896 TGTGTGTGTGTTAGAGAGAGAG 57.162 45.455 0.00 0.00 0.00 3.20
2739 5310 6.095580 GGATATGTGTGTGTGTTAGAGAGAGA 59.904 42.308 0.00 0.00 0.00 3.10
2740 5311 6.127619 TGGATATGTGTGTGTGTTAGAGAGAG 60.128 42.308 0.00 0.00 0.00 3.20
2741 5312 5.714806 TGGATATGTGTGTGTGTTAGAGAGA 59.285 40.000 0.00 0.00 0.00 3.10
2742 5313 5.965922 TGGATATGTGTGTGTGTTAGAGAG 58.034 41.667 0.00 0.00 0.00 3.20
2743 5314 5.993748 TGGATATGTGTGTGTGTTAGAGA 57.006 39.130 0.00 0.00 0.00 3.10
2744 5315 6.577103 AGATGGATATGTGTGTGTGTTAGAG 58.423 40.000 0.00 0.00 0.00 2.43
2745 5316 6.544928 AGATGGATATGTGTGTGTGTTAGA 57.455 37.500 0.00 0.00 0.00 2.10
2746 5317 8.893219 ATAAGATGGATATGTGTGTGTGTTAG 57.107 34.615 0.00 0.00 0.00 2.34
2747 5318 9.108284 CAATAAGATGGATATGTGTGTGTGTTA 57.892 33.333 0.00 0.00 0.00 2.41
2748 5319 7.067372 CCAATAAGATGGATATGTGTGTGTGTT 59.933 37.037 0.00 0.00 43.54 3.32
2749 5320 6.543465 CCAATAAGATGGATATGTGTGTGTGT 59.457 38.462 0.00 0.00 43.54 3.72
2750 5321 6.016860 CCCAATAAGATGGATATGTGTGTGTG 60.017 42.308 0.00 0.00 43.54 3.82
2751 5322 6.064060 CCCAATAAGATGGATATGTGTGTGT 58.936 40.000 0.00 0.00 43.54 3.72
2752 5323 6.064060 ACCCAATAAGATGGATATGTGTGTG 58.936 40.000 0.00 0.00 43.54 3.82
2753 5324 6.266131 ACCCAATAAGATGGATATGTGTGT 57.734 37.500 0.00 0.00 43.54 3.72
2754 5325 9.605275 CTATACCCAATAAGATGGATATGTGTG 57.395 37.037 0.00 0.00 43.54 3.82
2755 5326 8.772250 CCTATACCCAATAAGATGGATATGTGT 58.228 37.037 0.00 0.00 43.54 3.72
2756 5327 8.992349 TCCTATACCCAATAAGATGGATATGTG 58.008 37.037 0.00 0.00 43.54 3.21
2757 5328 8.993424 GTCCTATACCCAATAAGATGGATATGT 58.007 37.037 0.00 0.00 43.54 2.29
2758 5329 8.432805 GGTCCTATACCCAATAAGATGGATATG 58.567 40.741 0.00 0.00 43.54 1.78
2759 5330 8.568617 GGTCCTATACCCAATAAGATGGATAT 57.431 38.462 0.00 0.00 43.54 1.63
2760 5331 7.989947 GGTCCTATACCCAATAAGATGGATA 57.010 40.000 0.00 0.00 43.54 2.59
2761 5332 6.893020 GGTCCTATACCCAATAAGATGGAT 57.107 41.667 0.00 0.00 43.54 3.41
2777 5348 9.116080 TGTGAAATAGATGGATTATGGTCCTAT 57.884 33.333 0.00 0.00 39.12 2.57
2778 5349 8.375506 GTGTGAAATAGATGGATTATGGTCCTA 58.624 37.037 0.00 0.00 39.12 2.94
2779 5350 7.147320 TGTGTGAAATAGATGGATTATGGTCCT 60.147 37.037 0.00 0.00 39.12 3.85
2780 5351 6.998074 TGTGTGAAATAGATGGATTATGGTCC 59.002 38.462 0.00 0.00 38.81 4.46
2781 5352 8.627208 ATGTGTGAAATAGATGGATTATGGTC 57.373 34.615 0.00 0.00 0.00 4.02
2784 5355 9.999009 GCATATGTGTGAAATAGATGGATTATG 57.001 33.333 4.29 0.00 0.00 1.90
2785 5356 9.970553 AGCATATGTGTGAAATAGATGGATTAT 57.029 29.630 4.29 0.00 0.00 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.