Multiple sequence alignment - TraesCS3B01G142000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G142000 chr3B 100.000 3362 0 0 1 3362 129374315 129370954 0.000000e+00 6209.0
1 TraesCS3B01G142000 chr3A 89.453 1555 139 12 924 2471 96080224 96078688 0.000000e+00 1940.0
2 TraesCS3B01G142000 chr3A 89.260 1555 142 12 924 2471 96028471 96026935 0.000000e+00 1923.0
3 TraesCS3B01G142000 chr3A 88.736 1527 109 28 888 2381 98637679 98636183 0.000000e+00 1808.0
4 TraesCS3B01G142000 chr3A 91.445 713 45 6 2292 3004 98636216 98635520 0.000000e+00 965.0
5 TraesCS3B01G142000 chr3A 91.076 437 34 5 2461 2894 96020023 96019589 1.340000e-163 586.0
6 TraesCS3B01G142000 chr3A 90.389 437 38 4 2461 2894 96071889 96071454 3.760000e-159 571.0
7 TraesCS3B01G142000 chr3A 96.078 102 2 1 2374 2475 96078690 96078591 7.460000e-37 165.0
8 TraesCS3B01G142000 chr3A 93.458 107 4 2 2374 2480 96026937 96026834 4.490000e-34 156.0
9 TraesCS3B01G142000 chr3D 90.390 1436 105 13 1214 2638 82557460 82556047 0.000000e+00 1857.0
10 TraesCS3B01G142000 chr3D 93.682 823 43 4 1 814 534944346 534945168 0.000000e+00 1223.0
11 TraesCS3B01G142000 chr3D 93.642 346 21 1 3018 3362 476514077 476513732 1.790000e-142 516.0
12 TraesCS3B01G142000 chr3D 88.679 53 4 2 762 814 75115865 75115915 2.800000e-06 63.9
13 TraesCS3B01G142000 chr6D 95.956 816 30 3 1 814 32915458 32914644 0.000000e+00 1321.0
14 TraesCS3B01G142000 chr2D 94.383 819 43 3 1 818 532747065 532746249 0.000000e+00 1254.0
15 TraesCS3B01G142000 chr2D 88.679 53 5 1 762 814 11582898 11582847 2.800000e-06 63.9
16 TraesCS3B01G142000 chr7B 93.146 817 50 5 3 815 430535727 430536541 0.000000e+00 1194.0
17 TraesCS3B01G142000 chr4A 94.337 671 35 3 146 814 90512624 90513293 0.000000e+00 1026.0
18 TraesCS3B01G142000 chr4A 83.529 85 9 5 2648 2730 309073874 309073793 1.290000e-09 75.0
19 TraesCS3B01G142000 chr5A 94.640 541 27 2 275 814 32855196 32854657 0.000000e+00 837.0
20 TraesCS3B01G142000 chr5A 96.639 238 7 1 1 237 32855430 32855193 8.740000e-106 394.0
21 TraesCS3B01G142000 chr5A 83.810 105 14 2 2626 2730 46711385 46711486 2.760000e-16 97.1
22 TraesCS3B01G142000 chr4B 94.135 341 20 0 3022 3362 94788304 94787964 1.380000e-143 520.0
23 TraesCS3B01G142000 chr7D 93.842 341 21 0 3022 3362 175659432 175659772 6.430000e-142 514.0
24 TraesCS3B01G142000 chr7D 93.294 343 22 1 3021 3362 491249735 491250077 3.870000e-139 505.0
25 TraesCS3B01G142000 chr1D 93.842 341 21 0 3022 3362 421078228 421078568 6.430000e-142 514.0
26 TraesCS3B01G142000 chr1D 93.529 340 21 1 3023 3362 1253083 1253421 3.870000e-139 505.0
27 TraesCS3B01G142000 chr2A 93.548 341 20 2 3022 3362 752309410 752309748 1.080000e-139 507.0
28 TraesCS3B01G142000 chr2A 93.275 342 23 0 3021 3362 52544936 52544595 3.870000e-139 505.0
29 TraesCS3B01G142000 chr2A 93.275 342 23 0 3021 3362 765661135 765660794 3.870000e-139 505.0
30 TraesCS3B01G142000 chr6B 93.878 98 6 0 415 512 139427957 139428054 7.520000e-32 148.0
31 TraesCS3B01G142000 chr6B 84.270 89 12 2 2642 2729 140618421 140618334 5.980000e-13 86.1
32 TraesCS3B01G142000 chr1A 89.706 68 5 2 2663 2729 379861104 379861038 5.980000e-13 86.1
33 TraesCS3B01G142000 chrUn 82.558 86 14 1 2648 2733 80134452 80134368 1.290000e-09 75.0
34 TraesCS3B01G142000 chrUn 80.899 89 16 1 2645 2733 223961394 223961481 6.020000e-08 69.4
35 TraesCS3B01G142000 chr5D 87.719 57 5 2 762 817 297963265 297963320 7.790000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G142000 chr3B 129370954 129374315 3361 True 6209.0 6209 100.0000 1 3362 1 chr3B.!!$R1 3361
1 TraesCS3B01G142000 chr3A 98635520 98637679 2159 True 1386.5 1808 90.0905 888 3004 2 chr3A.!!$R5 2116
2 TraesCS3B01G142000 chr3A 96078591 96080224 1633 True 1052.5 1940 92.7655 924 2475 2 chr3A.!!$R4 1551
3 TraesCS3B01G142000 chr3A 96026834 96028471 1637 True 1039.5 1923 91.3590 924 2480 2 chr3A.!!$R3 1556
4 TraesCS3B01G142000 chr3D 82556047 82557460 1413 True 1857.0 1857 90.3900 1214 2638 1 chr3D.!!$R1 1424
5 TraesCS3B01G142000 chr3D 534944346 534945168 822 False 1223.0 1223 93.6820 1 814 1 chr3D.!!$F2 813
6 TraesCS3B01G142000 chr6D 32914644 32915458 814 True 1321.0 1321 95.9560 1 814 1 chr6D.!!$R1 813
7 TraesCS3B01G142000 chr2D 532746249 532747065 816 True 1254.0 1254 94.3830 1 818 1 chr2D.!!$R2 817
8 TraesCS3B01G142000 chr7B 430535727 430536541 814 False 1194.0 1194 93.1460 3 815 1 chr7B.!!$F1 812
9 TraesCS3B01G142000 chr4A 90512624 90513293 669 False 1026.0 1026 94.3370 146 814 1 chr4A.!!$F1 668
10 TraesCS3B01G142000 chr5A 32854657 32855430 773 True 615.5 837 95.6395 1 814 2 chr5A.!!$R1 813

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 410 0.09820 TTACTGGTCGACGATGCTCG 59.902 55.0 9.92 4.36 46.93 5.03 F
985 1003 0.17691 GGAAAGAAGAGGAGGGAGCG 59.823 60.0 0.00 0.00 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1942 1994 0.174162 CCCCAAGCTGCTTACAATGC 59.826 55.0 15.51 0.0 0.00 3.56 R
2533 2686 0.179108 CGACTTCCGGGTCCAAGATC 60.179 60.0 0.00 0.0 33.07 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
133 135 2.185004 AAATGTGTTCGTCCTGGAGG 57.815 50.000 10.09 10.09 0.00 4.30
181 184 5.304686 TGTCAGTTCTTAACATCTTGGGT 57.695 39.130 0.00 0.00 0.00 4.51
184 187 7.284074 TGTCAGTTCTTAACATCTTGGGTAAA 58.716 34.615 0.00 0.00 0.00 2.01
237 240 0.666913 GACAGCGATCCCGTAAGCTA 59.333 55.000 0.00 0.00 37.94 3.32
259 262 1.739067 GATGGTGGTGTAGGAAGTGC 58.261 55.000 0.00 0.00 0.00 4.40
291 294 5.758296 TCGACATAGCTGGAACCAATAAATC 59.242 40.000 0.00 0.00 0.00 2.17
322 325 3.489738 CCTTTTTGTGCTCTCCTGTGTTG 60.490 47.826 0.00 0.00 0.00 3.33
406 409 2.493713 ATTACTGGTCGACGATGCTC 57.506 50.000 9.92 0.00 0.00 4.26
407 410 0.098200 TTACTGGTCGACGATGCTCG 59.902 55.000 9.92 4.36 46.93 5.03
419 422 1.588404 CGATGCTCGTGGTCATGTTAC 59.412 52.381 0.00 0.00 34.72 2.50
435 439 7.604164 GGTCATGTTACCAAGGATATGATGTAG 59.396 40.741 0.00 0.00 39.50 2.74
483 487 4.105577 TCTGTTTGGGTGGCTTATACCTA 58.894 43.478 0.00 0.00 38.30 3.08
485 489 3.847780 TGTTTGGGTGGCTTATACCTAGT 59.152 43.478 0.00 0.00 38.30 2.57
662 678 4.230455 TGGGGGAAATTTCACTCAAATGT 58.770 39.130 20.82 0.00 38.35 2.71
675 691 4.275689 CACTCAAATGTGTGTAAGCTTGGA 59.724 41.667 9.86 0.00 35.50 3.53
697 713 7.319646 TGGAAACAAAATTGAATATCCGAAGG 58.680 34.615 0.00 0.00 46.16 3.46
731 747 9.663904 CAATAATTATTACACAAAGGATGACCG 57.336 33.333 10.34 0.00 41.83 4.79
759 775 3.815401 AGGTCAATTTGAGCACACTACAC 59.185 43.478 25.63 1.06 46.52 2.90
815 833 3.447918 GCACGGGCATCTTACTAGTTA 57.552 47.619 3.77 0.00 40.72 2.24
818 836 4.448060 GCACGGGCATCTTACTAGTTATTC 59.552 45.833 3.77 0.00 40.72 1.75
819 837 5.597806 CACGGGCATCTTACTAGTTATTCA 58.402 41.667 0.00 0.00 0.00 2.57
820 838 6.046593 CACGGGCATCTTACTAGTTATTCAA 58.953 40.000 0.00 0.00 0.00 2.69
821 839 6.706270 CACGGGCATCTTACTAGTTATTCAAT 59.294 38.462 0.00 0.00 0.00 2.57
822 840 7.870954 CACGGGCATCTTACTAGTTATTCAATA 59.129 37.037 0.00 0.00 0.00 1.90
823 841 8.426489 ACGGGCATCTTACTAGTTATTCAATAA 58.574 33.333 0.00 0.00 0.00 1.40
824 842 9.268268 CGGGCATCTTACTAGTTATTCAATAAA 57.732 33.333 0.00 0.00 0.00 1.40
834 852 8.943002 ACTAGTTATTCAATAAAGTTTGTCCGG 58.057 33.333 0.00 0.00 0.00 5.14
835 853 7.754851 AGTTATTCAATAAAGTTTGTCCGGT 57.245 32.000 0.00 0.00 0.00 5.28
836 854 8.173542 AGTTATTCAATAAAGTTTGTCCGGTT 57.826 30.769 0.00 0.00 0.00 4.44
837 855 8.635328 AGTTATTCAATAAAGTTTGTCCGGTTT 58.365 29.630 0.00 0.00 0.00 3.27
838 856 8.696175 GTTATTCAATAAAGTTTGTCCGGTTTG 58.304 33.333 0.00 0.00 0.00 2.93
839 857 4.612943 TCAATAAAGTTTGTCCGGTTTGC 58.387 39.130 0.00 0.00 0.00 3.68
840 858 3.653539 ATAAAGTTTGTCCGGTTTGCC 57.346 42.857 0.00 0.00 0.00 4.52
841 859 1.187087 AAAGTTTGTCCGGTTTGCCA 58.813 45.000 0.00 0.00 34.09 4.92
842 860 1.187087 AAGTTTGTCCGGTTTGCCAA 58.813 45.000 0.00 0.00 34.09 4.52
843 861 1.187087 AGTTTGTCCGGTTTGCCAAA 58.813 45.000 0.00 1.80 34.09 3.28
844 862 1.550976 AGTTTGTCCGGTTTGCCAAAA 59.449 42.857 0.00 0.00 34.09 2.44
845 863 2.028020 AGTTTGTCCGGTTTGCCAAAAA 60.028 40.909 0.00 0.00 34.09 1.94
870 888 4.616181 AAAAAGACCGAGTGTGAGTTTG 57.384 40.909 0.00 0.00 0.00 2.93
871 889 2.981859 AAGACCGAGTGTGAGTTTGT 57.018 45.000 0.00 0.00 0.00 2.83
872 890 4.395959 AAAGACCGAGTGTGAGTTTGTA 57.604 40.909 0.00 0.00 0.00 2.41
873 891 4.602340 AAGACCGAGTGTGAGTTTGTAT 57.398 40.909 0.00 0.00 0.00 2.29
874 892 5.717078 AAGACCGAGTGTGAGTTTGTATA 57.283 39.130 0.00 0.00 0.00 1.47
875 893 5.056894 AGACCGAGTGTGAGTTTGTATAC 57.943 43.478 0.00 0.00 0.00 1.47
876 894 4.082354 AGACCGAGTGTGAGTTTGTATACC 60.082 45.833 0.00 0.00 0.00 2.73
877 895 3.830755 ACCGAGTGTGAGTTTGTATACCT 59.169 43.478 0.00 0.00 0.00 3.08
878 896 4.282703 ACCGAGTGTGAGTTTGTATACCTT 59.717 41.667 0.00 0.00 0.00 3.50
879 897 5.477984 ACCGAGTGTGAGTTTGTATACCTTA 59.522 40.000 0.00 0.00 0.00 2.69
880 898 5.803967 CCGAGTGTGAGTTTGTATACCTTAC 59.196 44.000 0.00 0.00 0.00 2.34
881 899 6.384224 CGAGTGTGAGTTTGTATACCTTACA 58.616 40.000 0.00 1.18 0.00 2.41
882 900 6.864685 CGAGTGTGAGTTTGTATACCTTACAA 59.135 38.462 0.00 0.00 35.84 2.41
883 901 7.061905 CGAGTGTGAGTTTGTATACCTTACAAG 59.938 40.741 0.00 0.00 38.47 3.16
884 902 6.649557 AGTGTGAGTTTGTATACCTTACAAGC 59.350 38.462 0.00 4.73 38.47 4.01
885 903 5.935789 TGTGAGTTTGTATACCTTACAAGCC 59.064 40.000 0.00 2.95 38.75 4.35
886 904 5.353400 GTGAGTTTGTATACCTTACAAGCCC 59.647 44.000 0.00 0.00 38.75 5.19
899 917 8.063200 ACCTTACAAGCCCTAAAACATTTATC 57.937 34.615 0.00 0.00 0.00 1.75
900 918 7.123697 ACCTTACAAGCCCTAAAACATTTATCC 59.876 37.037 0.00 0.00 0.00 2.59
901 919 7.123547 CCTTACAAGCCCTAAAACATTTATCCA 59.876 37.037 0.00 0.00 0.00 3.41
902 920 6.926630 ACAAGCCCTAAAACATTTATCCAA 57.073 33.333 0.00 0.00 0.00 3.53
903 921 6.935167 ACAAGCCCTAAAACATTTATCCAAG 58.065 36.000 0.00 0.00 0.00 3.61
905 923 7.234577 ACAAGCCCTAAAACATTTATCCAAGAA 59.765 33.333 0.00 0.00 0.00 2.52
906 924 7.790782 AGCCCTAAAACATTTATCCAAGAAA 57.209 32.000 0.00 0.00 0.00 2.52
907 925 7.611770 AGCCCTAAAACATTTATCCAAGAAAC 58.388 34.615 0.00 0.00 0.00 2.78
908 926 7.234577 AGCCCTAAAACATTTATCCAAGAAACA 59.765 33.333 0.00 0.00 0.00 2.83
909 927 7.545615 GCCCTAAAACATTTATCCAAGAAACAG 59.454 37.037 0.00 0.00 0.00 3.16
910 928 8.802267 CCCTAAAACATTTATCCAAGAAACAGA 58.198 33.333 0.00 0.00 0.00 3.41
927 945 9.725019 AAGAAACAGAAAAAGAAAGTGGAAAAT 57.275 25.926 0.00 0.00 0.00 1.82
976 994 0.798771 CGGCGTCGAGGAAAGAAGAG 60.799 60.000 1.44 0.00 39.00 2.85
984 1002 1.484653 GAGGAAAGAAGAGGAGGGAGC 59.515 57.143 0.00 0.00 0.00 4.70
985 1003 0.176910 GGAAAGAAGAGGAGGGAGCG 59.823 60.000 0.00 0.00 0.00 5.03
987 1005 2.232298 AAAGAAGAGGAGGGAGCGCG 62.232 60.000 0.00 0.00 0.00 6.86
1009 1027 1.272092 TGCTTTTGGAGATGGAGGTGG 60.272 52.381 0.00 0.00 0.00 4.61
1010 1028 1.467920 CTTTTGGAGATGGAGGTGGC 58.532 55.000 0.00 0.00 0.00 5.01
1027 1045 3.944476 GCAGGAGAAGCCAAAGAGA 57.056 52.632 0.00 0.00 40.02 3.10
1030 1048 1.065564 CAGGAGAAGCCAAAGAGAGGG 60.066 57.143 0.00 0.00 40.02 4.30
1087 1126 2.174424 GCCAAATCCTCTTCTGGGATCT 59.826 50.000 0.00 0.00 42.15 2.75
1105 1144 0.179171 CTACGACGATTCAGCCACGT 60.179 55.000 0.00 0.00 42.84 4.49
1117 1156 2.278206 CCACGTCGGAGCAGATCG 60.278 66.667 0.00 0.00 36.56 3.69
1148 1187 3.961480 AGACGACAACTCAATGGATCA 57.039 42.857 0.00 0.00 0.00 2.92
1149 1188 4.478206 AGACGACAACTCAATGGATCAT 57.522 40.909 0.00 0.00 0.00 2.45
1150 1189 4.836825 AGACGACAACTCAATGGATCATT 58.163 39.130 0.00 0.00 34.04 2.57
1152 1191 5.812642 AGACGACAACTCAATGGATCATTAC 59.187 40.000 0.00 0.00 32.35 1.89
1197 1236 3.700038 ACTTGACGGACGAGGAGATTATT 59.300 43.478 0.00 0.00 34.46 1.40
1245 1284 3.826221 TGCTATGGCATGTTCGGC 58.174 55.556 10.98 7.18 44.28 5.54
1246 1285 2.179547 TGCTATGGCATGTTCGGCG 61.180 57.895 10.98 0.00 44.28 6.46
1247 1286 2.896801 GCTATGGCATGTTCGGCGG 61.897 63.158 10.98 0.00 38.54 6.13
1252 1291 3.430862 GCATGTTCGGCGGCTTCA 61.431 61.111 7.21 3.68 0.00 3.02
1285 1324 7.816945 AGTACGTAAACAATATACGCACTTT 57.183 32.000 0.00 0.00 45.98 2.66
1289 1328 7.866038 CGTAAACAATATACGCACTTTTACC 57.134 36.000 0.00 0.00 39.56 2.85
1290 1329 7.678226 CGTAAACAATATACGCACTTTTACCT 58.322 34.615 0.00 0.00 39.56 3.08
1292 1331 7.675962 AAACAATATACGCACTTTTACCTGA 57.324 32.000 0.00 0.00 0.00 3.86
1293 1332 6.903883 ACAATATACGCACTTTTACCTGAG 57.096 37.500 0.00 0.00 0.00 3.35
1294 1333 6.403878 ACAATATACGCACTTTTACCTGAGT 58.596 36.000 0.00 0.00 0.00 3.41
1295 1334 6.877322 ACAATATACGCACTTTTACCTGAGTT 59.123 34.615 0.00 0.00 0.00 3.01
1296 1335 8.036575 ACAATATACGCACTTTTACCTGAGTTA 58.963 33.333 0.00 0.00 0.00 2.24
1297 1336 9.042008 CAATATACGCACTTTTACCTGAGTTAT 57.958 33.333 0.00 0.00 0.00 1.89
1325 1366 1.747355 GCATAATCACTTGCAGCCAGT 59.253 47.619 0.00 0.00 38.72 4.00
1334 1375 6.588719 TCACTTGCAGCCAGTATAATTTTT 57.411 33.333 0.00 0.00 0.00 1.94
1338 1379 7.599998 CACTTGCAGCCAGTATAATTTTTCTTT 59.400 33.333 0.00 0.00 0.00 2.52
1365 1406 5.794687 TTGCAATCATCGAAATCGTAACT 57.205 34.783 0.00 0.00 40.80 2.24
1372 1413 8.331022 CAATCATCGAAATCGTAACTGAAGAAT 58.669 33.333 2.41 0.00 40.80 2.40
1373 1414 7.827819 TCATCGAAATCGTAACTGAAGAATT 57.172 32.000 2.41 0.00 40.80 2.17
1424 1469 3.533606 TCTTGCTGAGAGACCTTATGC 57.466 47.619 0.00 0.00 0.00 3.14
1427 1472 2.182827 TGCTGAGAGACCTTATGCTGT 58.817 47.619 0.00 0.00 0.00 4.40
1428 1473 3.365472 TGCTGAGAGACCTTATGCTGTA 58.635 45.455 0.00 0.00 0.00 2.74
1429 1474 3.131223 TGCTGAGAGACCTTATGCTGTAC 59.869 47.826 0.00 0.00 0.00 2.90
1430 1475 3.383185 GCTGAGAGACCTTATGCTGTACT 59.617 47.826 0.00 0.00 0.00 2.73
1431 1476 4.580995 GCTGAGAGACCTTATGCTGTACTA 59.419 45.833 0.00 0.00 0.00 1.82
1467 1515 1.783711 GTATGCAGCGACGATCAAGAG 59.216 52.381 0.00 0.00 0.00 2.85
1535 1583 2.906389 ACCTTGCAAGTCTACTCCATCA 59.094 45.455 24.35 0.00 0.00 3.07
1700 1748 1.903404 CCCTGCTTGTGGTGGGTTC 60.903 63.158 0.00 0.00 35.13 3.62
1781 1833 4.463879 CGCTGACTGGCCCCTCTG 62.464 72.222 0.00 0.00 0.00 3.35
1831 1883 9.788960 GTTGACTTTGAAGTTGATCTTAAGTTT 57.211 29.630 1.63 0.00 39.88 2.66
1894 1946 2.108362 CGATACCAACGGAGCCCC 59.892 66.667 0.00 0.00 0.00 5.80
1942 1994 5.138125 ACAACCTTTGCACCATAAGATTG 57.862 39.130 2.02 2.02 0.00 2.67
2011 2067 2.224113 GCAAATTATGGGTCATGGCCTG 60.224 50.000 17.62 5.67 0.00 4.85
2015 2071 1.695114 TATGGGTCATGGCCTGGTCG 61.695 60.000 17.62 0.00 0.00 4.79
2018 2074 1.227674 GGTCATGGCCTGGTCGATC 60.228 63.158 9.76 0.00 0.00 3.69
2078 2134 4.025480 CCTTGAAGAATTTGTGTTGCTTGC 60.025 41.667 0.00 0.00 0.00 4.01
2088 2144 2.159254 TGTGTTGCTTGCTTTTCCAGAC 60.159 45.455 0.00 0.00 0.00 3.51
2225 2284 3.834231 AGCTTGAAAGTACCCATTGCAAT 59.166 39.130 5.99 5.99 0.00 3.56
2245 2304 2.479566 AGGTGATGCTGTGTTCGAAT 57.520 45.000 0.00 0.00 0.00 3.34
2253 2312 3.963665 TGCTGTGTTCGAATCCAAAAAG 58.036 40.909 0.00 0.00 0.00 2.27
2328 2387 4.837972 AGATTAAAGTGGCTTGGTCTCTC 58.162 43.478 0.00 0.00 0.00 3.20
2340 2399 3.887621 TGGTCTCTCCTTATTTGGTCG 57.112 47.619 0.00 0.00 37.07 4.79
2345 2404 2.860735 CTCTCCTTATTTGGTCGAAGCG 59.139 50.000 0.00 0.00 0.00 4.68
2378 2530 4.322424 GGGTTAACATTAAAGTGGCTTGGG 60.322 45.833 8.10 0.00 0.00 4.12
2427 2579 6.071165 CCTTCCTTGCTCTAATGAAACCAAAT 60.071 38.462 0.00 0.00 0.00 2.32
2527 2680 3.127548 GTGTCATGAGCTGGTTGTTATGG 59.872 47.826 0.00 0.00 0.00 2.74
2533 2686 3.209410 GAGCTGGTTGTTATGGGAGATG 58.791 50.000 0.00 0.00 0.00 2.90
2545 2698 0.394565 GGGAGATGATCTTGGACCCG 59.605 60.000 0.00 0.00 0.00 5.28
2552 2705 0.179108 GATCTTGGACCCGGAAGTCG 60.179 60.000 0.73 0.00 37.66 4.18
2593 2746 9.985730 AATTTAAATTGTGTCATGTGAGATGTT 57.014 25.926 12.62 0.00 0.00 2.71
2621 2774 5.464722 GCTACTTCTGTATGGATGTCATGTG 59.535 44.000 0.00 0.00 37.30 3.21
2630 2783 5.918426 ATGGATGTCATGTGTGCAAAATA 57.082 34.783 0.00 0.00 34.22 1.40
2635 2788 5.963176 TGTCATGTGTGCAAAATATCAGT 57.037 34.783 0.00 0.00 0.00 3.41
2673 2828 6.270000 CCCTCTGTACCATCATATAAGAACCA 59.730 42.308 0.00 0.00 0.00 3.67
2686 2841 9.952030 TCATATAAGAACCATTTTGACACTACA 57.048 29.630 0.00 0.00 0.00 2.74
2788 2943 3.332485 ACCCCTGAGCACCAGTTAATTAA 59.668 43.478 0.00 0.00 41.33 1.40
2825 2980 0.245539 TGTGCTAGTTACTGGACGCC 59.754 55.000 0.00 0.00 0.00 5.68
2870 3025 0.035439 TAAGCCAGGCCTACAGCAAC 60.035 55.000 20.28 0.49 46.50 4.17
2872 3027 0.909610 AGCCAGGCCTACAGCAACTA 60.910 55.000 20.28 0.00 46.50 2.24
2924 3079 2.143122 TGAGCAGGTGATTTCGTCAAC 58.857 47.619 0.00 0.00 45.27 3.18
2964 3119 3.328382 TGTAATTGTAGCGAGCAGGTT 57.672 42.857 0.00 0.00 0.00 3.50
2970 3125 3.603158 TGTAGCGAGCAGGTTATTTCA 57.397 42.857 0.00 0.00 0.00 2.69
3006 3161 9.850628 CAATTTCATGATAGATTCTTTGTGTGT 57.149 29.630 0.00 0.00 0.00 3.72
3009 3164 9.897744 TTTCATGATAGATTCTTTGTGTGTTTC 57.102 29.630 0.00 0.00 0.00 2.78
3010 3165 8.620116 TCATGATAGATTCTTTGTGTGTTTCA 57.380 30.769 0.00 0.00 0.00 2.69
3011 3166 9.234827 TCATGATAGATTCTTTGTGTGTTTCAT 57.765 29.630 0.00 0.00 0.00 2.57
3012 3167 9.850628 CATGATAGATTCTTTGTGTGTTTCATT 57.149 29.630 0.00 0.00 0.00 2.57
3013 3168 9.850628 ATGATAGATTCTTTGTGTGTTTCATTG 57.149 29.630 0.00 0.00 0.00 2.82
3014 3169 8.849168 TGATAGATTCTTTGTGTGTTTCATTGT 58.151 29.630 0.00 0.00 0.00 2.71
3015 3170 9.334693 GATAGATTCTTTGTGTGTTTCATTGTC 57.665 33.333 0.00 0.00 0.00 3.18
3016 3171 7.099266 AGATTCTTTGTGTGTTTCATTGTCA 57.901 32.000 0.00 0.00 0.00 3.58
3017 3172 7.198390 AGATTCTTTGTGTGTTTCATTGTCAG 58.802 34.615 0.00 0.00 0.00 3.51
3018 3173 5.895636 TCTTTGTGTGTTTCATTGTCAGT 57.104 34.783 0.00 0.00 0.00 3.41
3019 3174 6.993786 TCTTTGTGTGTTTCATTGTCAGTA 57.006 33.333 0.00 0.00 0.00 2.74
3020 3175 7.384439 TCTTTGTGTGTTTCATTGTCAGTAA 57.616 32.000 0.00 0.00 0.00 2.24
3021 3176 7.995289 TCTTTGTGTGTTTCATTGTCAGTAAT 58.005 30.769 0.00 0.00 0.00 1.89
3022 3177 8.465999 TCTTTGTGTGTTTCATTGTCAGTAATT 58.534 29.630 0.00 0.00 0.00 1.40
3023 3178 8.994429 TTTGTGTGTTTCATTGTCAGTAATTT 57.006 26.923 0.00 0.00 0.00 1.82
3024 3179 8.994429 TTGTGTGTTTCATTGTCAGTAATTTT 57.006 26.923 0.00 0.00 0.00 1.82
3025 3180 8.994429 TGTGTGTTTCATTGTCAGTAATTTTT 57.006 26.923 0.00 0.00 0.00 1.94
3047 3202 6.911250 TTTTTAGAAAAAGAGGATGACCCC 57.089 37.500 0.00 0.00 33.29 4.95
3048 3203 4.586306 TTAGAAAAAGAGGATGACCCCC 57.414 45.455 0.00 0.00 36.73 5.40
3049 3204 1.282157 AGAAAAAGAGGATGACCCCCG 59.718 52.381 0.00 0.00 36.73 5.73
3050 3205 0.331616 AAAAAGAGGATGACCCCCGG 59.668 55.000 0.00 0.00 36.73 5.73
3051 3206 2.211468 AAAAGAGGATGACCCCCGGC 62.211 60.000 0.00 0.00 36.73 6.13
3056 3211 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
3062 3217 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
3063 3218 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
3064 3219 3.473647 CCGGCCTCTGCATCTGGA 61.474 66.667 0.00 0.00 40.13 3.86
3065 3220 2.202987 CGGCCTCTGCATCTGGAC 60.203 66.667 0.00 0.35 40.13 4.02
3066 3221 2.202987 GGCCTCTGCATCTGGACG 60.203 66.667 0.00 0.00 40.13 4.79
3067 3222 2.725312 GGCCTCTGCATCTGGACGA 61.725 63.158 0.00 0.00 40.13 4.20
3068 3223 1.445095 GCCTCTGCATCTGGACGAT 59.555 57.895 0.00 0.00 37.47 3.73
3076 3231 1.422388 CATCTGGACGATGCATACGG 58.578 55.000 18.34 6.85 42.75 4.02
3077 3232 1.040646 ATCTGGACGATGCATACGGT 58.959 50.000 18.34 9.62 34.93 4.83
3078 3233 0.384309 TCTGGACGATGCATACGGTC 59.616 55.000 18.34 16.09 34.93 4.79
3079 3234 0.102300 CTGGACGATGCATACGGTCA 59.898 55.000 20.24 15.70 34.93 4.02
3080 3235 0.179121 TGGACGATGCATACGGTCAC 60.179 55.000 20.24 13.05 34.93 3.67
3081 3236 0.102481 GGACGATGCATACGGTCACT 59.898 55.000 20.24 3.82 34.93 3.41
3082 3237 1.470979 GGACGATGCATACGGTCACTT 60.471 52.381 20.24 3.27 34.93 3.16
3083 3238 2.268298 GACGATGCATACGGTCACTTT 58.732 47.619 18.34 1.14 34.93 2.66
3084 3239 3.441163 GACGATGCATACGGTCACTTTA 58.559 45.455 18.34 0.00 34.93 1.85
3085 3240 4.049186 GACGATGCATACGGTCACTTTAT 58.951 43.478 18.34 0.01 34.93 1.40
3086 3241 4.439057 ACGATGCATACGGTCACTTTATT 58.561 39.130 18.34 0.00 34.93 1.40
3087 3242 5.593968 ACGATGCATACGGTCACTTTATTA 58.406 37.500 18.34 0.00 34.93 0.98
3088 3243 6.044046 ACGATGCATACGGTCACTTTATTAA 58.956 36.000 18.34 0.00 34.93 1.40
3089 3244 6.704493 ACGATGCATACGGTCACTTTATTAAT 59.296 34.615 18.34 0.00 34.93 1.40
3090 3245 7.225931 ACGATGCATACGGTCACTTTATTAATT 59.774 33.333 18.34 0.00 34.93 1.40
3091 3246 8.705134 CGATGCATACGGTCACTTTATTAATTA 58.295 33.333 0.00 0.00 0.00 1.40
3099 3254 9.661563 ACGGTCACTTTATTAATTATTCTCACA 57.338 29.630 0.00 0.00 0.00 3.58
3118 3273 9.871238 TTCTCACAAGACCTTATAAAGTCATAC 57.129 33.333 15.04 0.00 0.00 2.39
3119 3274 9.031537 TCTCACAAGACCTTATAAAGTCATACA 57.968 33.333 15.04 0.00 0.00 2.29
3120 3275 9.653287 CTCACAAGACCTTATAAAGTCATACAA 57.347 33.333 15.04 0.00 0.00 2.41
3121 3276 9.431887 TCACAAGACCTTATAAAGTCATACAAC 57.568 33.333 15.04 0.00 0.00 3.32
3122 3277 9.214957 CACAAGACCTTATAAAGTCATACAACA 57.785 33.333 15.04 0.00 0.00 3.33
3123 3278 9.436957 ACAAGACCTTATAAAGTCATACAACAG 57.563 33.333 15.04 0.00 0.00 3.16
3124 3279 9.436957 CAAGACCTTATAAAGTCATACAACAGT 57.563 33.333 15.04 0.00 0.00 3.55
3141 3296 1.339097 AGTAAGACTGAAGCCACCGT 58.661 50.000 0.00 0.00 0.00 4.83
3142 3297 1.272769 AGTAAGACTGAAGCCACCGTC 59.727 52.381 0.00 0.00 0.00 4.79
3143 3298 1.272769 GTAAGACTGAAGCCACCGTCT 59.727 52.381 0.00 0.00 38.29 4.18
3144 3299 1.629043 AAGACTGAAGCCACCGTCTA 58.371 50.000 5.55 0.00 35.82 2.59
3145 3300 1.629043 AGACTGAAGCCACCGTCTAA 58.371 50.000 3.74 0.00 35.15 2.10
3146 3301 1.546476 AGACTGAAGCCACCGTCTAAG 59.454 52.381 3.74 0.00 35.15 2.18
3147 3302 0.037232 ACTGAAGCCACCGTCTAAGC 60.037 55.000 0.00 0.00 0.00 3.09
3148 3303 0.037326 CTGAAGCCACCGTCTAAGCA 60.037 55.000 0.00 0.00 0.00 3.91
3149 3304 0.394938 TGAAGCCACCGTCTAAGCAA 59.605 50.000 0.00 0.00 0.00 3.91
3150 3305 1.202710 TGAAGCCACCGTCTAAGCAAA 60.203 47.619 0.00 0.00 0.00 3.68
3151 3306 1.877443 GAAGCCACCGTCTAAGCAAAA 59.123 47.619 0.00 0.00 0.00 2.44
3152 3307 1.975660 AGCCACCGTCTAAGCAAAAA 58.024 45.000 0.00 0.00 0.00 1.94
3153 3308 1.607148 AGCCACCGTCTAAGCAAAAAC 59.393 47.619 0.00 0.00 0.00 2.43
3154 3309 1.607148 GCCACCGTCTAAGCAAAAACT 59.393 47.619 0.00 0.00 0.00 2.66
3155 3310 2.604614 GCCACCGTCTAAGCAAAAACTG 60.605 50.000 0.00 0.00 0.00 3.16
3156 3311 2.616842 CCACCGTCTAAGCAAAAACTGT 59.383 45.455 0.00 0.00 0.00 3.55
3157 3312 3.303791 CCACCGTCTAAGCAAAAACTGTC 60.304 47.826 0.00 0.00 0.00 3.51
3158 3313 2.542595 ACCGTCTAAGCAAAAACTGTCG 59.457 45.455 0.00 0.00 0.00 4.35
3159 3314 2.560896 CGTCTAAGCAAAAACTGTCGC 58.439 47.619 0.00 0.00 0.00 5.19
3160 3315 2.221055 CGTCTAAGCAAAAACTGTCGCT 59.779 45.455 0.00 0.00 35.90 4.93
3161 3316 3.427528 CGTCTAAGCAAAAACTGTCGCTA 59.572 43.478 0.00 0.00 33.45 4.26
3162 3317 4.663389 CGTCTAAGCAAAAACTGTCGCTAC 60.663 45.833 0.00 0.00 33.45 3.58
3163 3318 4.210537 GTCTAAGCAAAAACTGTCGCTACA 59.789 41.667 0.00 0.00 33.45 2.74
3164 3319 3.334272 AAGCAAAAACTGTCGCTACAC 57.666 42.857 0.00 0.00 33.45 2.90
3165 3320 1.602377 AGCAAAAACTGTCGCTACACC 59.398 47.619 0.00 0.00 31.60 4.16
3166 3321 1.602377 GCAAAAACTGTCGCTACACCT 59.398 47.619 0.00 0.00 0.00 4.00
3167 3322 2.803956 GCAAAAACTGTCGCTACACCTA 59.196 45.455 0.00 0.00 0.00 3.08
3168 3323 3.435671 GCAAAAACTGTCGCTACACCTAT 59.564 43.478 0.00 0.00 0.00 2.57
3169 3324 4.435651 GCAAAAACTGTCGCTACACCTATC 60.436 45.833 0.00 0.00 0.00 2.08
3170 3325 3.521947 AAACTGTCGCTACACCTATCC 57.478 47.619 0.00 0.00 0.00 2.59
3171 3326 2.139323 ACTGTCGCTACACCTATCCA 57.861 50.000 0.00 0.00 0.00 3.41
3172 3327 2.453521 ACTGTCGCTACACCTATCCAA 58.546 47.619 0.00 0.00 0.00 3.53
3173 3328 3.031736 ACTGTCGCTACACCTATCCAAT 58.968 45.455 0.00 0.00 0.00 3.16
3174 3329 3.451178 ACTGTCGCTACACCTATCCAATT 59.549 43.478 0.00 0.00 0.00 2.32
3175 3330 3.792401 TGTCGCTACACCTATCCAATTG 58.208 45.455 0.00 0.00 0.00 2.32
3176 3331 3.449377 TGTCGCTACACCTATCCAATTGA 59.551 43.478 7.12 0.00 0.00 2.57
3177 3332 4.100963 TGTCGCTACACCTATCCAATTGAT 59.899 41.667 7.12 1.44 37.49 2.57
3178 3333 4.449068 GTCGCTACACCTATCCAATTGATG 59.551 45.833 7.12 0.00 34.76 3.07
3179 3334 4.343814 TCGCTACACCTATCCAATTGATGA 59.656 41.667 7.12 0.00 34.76 2.92
3180 3335 5.012046 TCGCTACACCTATCCAATTGATGAT 59.988 40.000 7.12 4.75 34.76 2.45
3181 3336 5.121298 CGCTACACCTATCCAATTGATGATG 59.879 44.000 7.12 0.26 34.76 3.07
3182 3337 5.413833 GCTACACCTATCCAATTGATGATGG 59.586 44.000 7.12 4.18 38.09 3.51
3187 3342 1.311859 TCCAATTGATGATGGAGCGC 58.688 50.000 7.12 0.00 40.74 5.92
3188 3343 1.134007 TCCAATTGATGATGGAGCGCT 60.134 47.619 11.27 11.27 40.74 5.92
3189 3344 1.001706 CCAATTGATGATGGAGCGCTG 60.002 52.381 18.48 0.00 39.12 5.18
3190 3345 1.944709 CAATTGATGATGGAGCGCTGA 59.055 47.619 18.48 0.00 0.00 4.26
3191 3346 2.552743 CAATTGATGATGGAGCGCTGAT 59.447 45.455 18.48 6.40 0.00 2.90
3192 3347 3.690475 ATTGATGATGGAGCGCTGATA 57.310 42.857 18.48 0.00 0.00 2.15
3193 3348 2.738013 TGATGATGGAGCGCTGATAG 57.262 50.000 18.48 0.00 0.00 2.08
3194 3349 1.966354 TGATGATGGAGCGCTGATAGT 59.034 47.619 18.48 0.00 0.00 2.12
3195 3350 2.029560 TGATGATGGAGCGCTGATAGTC 60.030 50.000 18.48 6.49 0.00 2.59
3196 3351 1.697284 TGATGGAGCGCTGATAGTCT 58.303 50.000 18.48 0.00 0.00 3.24
3197 3352 1.339291 TGATGGAGCGCTGATAGTCTG 59.661 52.381 18.48 0.00 0.00 3.51
3198 3353 0.678395 ATGGAGCGCTGATAGTCTGG 59.322 55.000 18.48 0.00 0.00 3.86
3199 3354 1.365633 GGAGCGCTGATAGTCTGGG 59.634 63.158 18.48 0.00 0.00 4.45
3201 3356 2.280457 GCGCTGATAGTCTGGGCC 60.280 66.667 0.00 0.00 44.44 5.80
3202 3357 2.801631 GCGCTGATAGTCTGGGCCT 61.802 63.158 4.53 0.00 44.44 5.19
3203 3358 1.464376 GCGCTGATAGTCTGGGCCTA 61.464 60.000 4.53 0.00 44.44 3.93
3204 3359 1.040646 CGCTGATAGTCTGGGCCTAA 58.959 55.000 4.53 0.00 0.00 2.69
3205 3360 1.620819 CGCTGATAGTCTGGGCCTAAT 59.379 52.381 4.53 0.00 0.00 1.73
3206 3361 2.826128 CGCTGATAGTCTGGGCCTAATA 59.174 50.000 4.53 0.00 0.00 0.98
3207 3362 3.367498 CGCTGATAGTCTGGGCCTAATAC 60.367 52.174 4.53 0.00 0.00 1.89
3208 3363 3.055747 GCTGATAGTCTGGGCCTAATACC 60.056 52.174 4.53 0.00 0.00 2.73
3209 3364 4.160329 CTGATAGTCTGGGCCTAATACCA 58.840 47.826 4.53 0.00 35.05 3.25
3210 3365 4.562767 TGATAGTCTGGGCCTAATACCAA 58.437 43.478 4.53 0.00 36.09 3.67
3211 3366 4.972568 TGATAGTCTGGGCCTAATACCAAA 59.027 41.667 4.53 0.00 36.09 3.28
3212 3367 3.646736 AGTCTGGGCCTAATACCAAAC 57.353 47.619 4.53 0.00 36.09 2.93
3213 3368 2.916934 AGTCTGGGCCTAATACCAAACA 59.083 45.455 4.53 0.00 36.09 2.83
3214 3369 3.054361 AGTCTGGGCCTAATACCAAACAG 60.054 47.826 4.53 0.00 36.09 3.16
3215 3370 3.054655 GTCTGGGCCTAATACCAAACAGA 60.055 47.826 4.53 0.00 36.09 3.41
3216 3371 3.054655 TCTGGGCCTAATACCAAACAGAC 60.055 47.826 4.53 0.00 36.09 3.51
3217 3372 2.645297 TGGGCCTAATACCAAACAGACA 59.355 45.455 4.53 0.00 32.89 3.41
3218 3373 3.014623 GGGCCTAATACCAAACAGACAC 58.985 50.000 0.84 0.00 0.00 3.67
3219 3374 3.014623 GGCCTAATACCAAACAGACACC 58.985 50.000 0.00 0.00 0.00 4.16
3220 3375 2.676342 GCCTAATACCAAACAGACACCG 59.324 50.000 0.00 0.00 0.00 4.94
3221 3376 2.676342 CCTAATACCAAACAGACACCGC 59.324 50.000 0.00 0.00 0.00 5.68
3222 3377 2.264005 AATACCAAACAGACACCGCA 57.736 45.000 0.00 0.00 0.00 5.69
3223 3378 1.808411 ATACCAAACAGACACCGCAG 58.192 50.000 0.00 0.00 0.00 5.18
3224 3379 0.882927 TACCAAACAGACACCGCAGC 60.883 55.000 0.00 0.00 0.00 5.25
3225 3380 2.639286 CAAACAGACACCGCAGCC 59.361 61.111 0.00 0.00 0.00 4.85
3226 3381 2.186160 CAAACAGACACCGCAGCCA 61.186 57.895 0.00 0.00 0.00 4.75
3227 3382 1.453015 AAACAGACACCGCAGCCAA 60.453 52.632 0.00 0.00 0.00 4.52
3228 3383 1.034838 AAACAGACACCGCAGCCAAA 61.035 50.000 0.00 0.00 0.00 3.28
3229 3384 1.724582 AACAGACACCGCAGCCAAAC 61.725 55.000 0.00 0.00 0.00 2.93
3230 3385 2.594592 AGACACCGCAGCCAAACC 60.595 61.111 0.00 0.00 0.00 3.27
3231 3386 2.594592 GACACCGCAGCCAAACCT 60.595 61.111 0.00 0.00 0.00 3.50
3232 3387 1.302192 GACACCGCAGCCAAACCTA 60.302 57.895 0.00 0.00 0.00 3.08
3233 3388 0.887387 GACACCGCAGCCAAACCTAA 60.887 55.000 0.00 0.00 0.00 2.69
3234 3389 0.466555 ACACCGCAGCCAAACCTAAA 60.467 50.000 0.00 0.00 0.00 1.85
3235 3390 0.039527 CACCGCAGCCAAACCTAAAC 60.040 55.000 0.00 0.00 0.00 2.01
3236 3391 1.209127 CCGCAGCCAAACCTAAACG 59.791 57.895 0.00 0.00 0.00 3.60
3237 3392 1.512156 CCGCAGCCAAACCTAAACGT 61.512 55.000 0.00 0.00 0.00 3.99
3238 3393 0.110373 CGCAGCCAAACCTAAACGTC 60.110 55.000 0.00 0.00 0.00 4.34
3239 3394 1.235724 GCAGCCAAACCTAAACGTCT 58.764 50.000 0.00 0.00 0.00 4.18
3240 3395 2.419667 GCAGCCAAACCTAAACGTCTA 58.580 47.619 0.00 0.00 0.00 2.59
3241 3396 2.809696 GCAGCCAAACCTAAACGTCTAA 59.190 45.455 0.00 0.00 0.00 2.10
3242 3397 3.120304 GCAGCCAAACCTAAACGTCTAAG 60.120 47.826 0.00 0.00 0.00 2.18
3243 3398 4.312443 CAGCCAAACCTAAACGTCTAAGA 58.688 43.478 0.00 0.00 0.00 2.10
3244 3399 4.151867 CAGCCAAACCTAAACGTCTAAGAC 59.848 45.833 0.00 0.00 0.00 3.01
3245 3400 3.434641 GCCAAACCTAAACGTCTAAGACC 59.565 47.826 0.00 0.00 0.00 3.85
3246 3401 3.999001 CCAAACCTAAACGTCTAAGACCC 59.001 47.826 0.00 0.00 0.00 4.46
3247 3402 3.582714 AACCTAAACGTCTAAGACCCG 57.417 47.619 0.00 0.00 0.00 5.28
3248 3403 2.795329 ACCTAAACGTCTAAGACCCGA 58.205 47.619 0.00 0.00 0.00 5.14
3249 3404 2.751806 ACCTAAACGTCTAAGACCCGAG 59.248 50.000 0.00 0.00 0.00 4.63
3250 3405 2.098770 CCTAAACGTCTAAGACCCGAGG 59.901 54.545 0.00 0.00 0.00 4.63
3251 3406 1.625511 AAACGTCTAAGACCCGAGGT 58.374 50.000 0.00 0.00 39.44 3.85
3267 3422 3.637273 GTCCCAACCAGGACGCCT 61.637 66.667 0.00 0.00 46.57 5.52
3276 3431 2.365635 AGGACGCCTGCCTGGTAT 60.366 61.111 0.00 0.00 38.35 2.73
3277 3432 2.203070 GGACGCCTGCCTGGTATG 60.203 66.667 0.00 0.00 38.35 2.39
3278 3433 2.203070 GACGCCTGCCTGGTATGG 60.203 66.667 0.00 0.00 38.35 2.74
3279 3434 3.757248 GACGCCTGCCTGGTATGGG 62.757 68.421 0.00 0.00 38.35 4.00
3280 3435 4.569180 CGCCTGCCTGGTATGGGG 62.569 72.222 0.00 0.16 38.35 4.96
3296 3451 4.242602 GGCACCTACCAATCCAGC 57.757 61.111 0.00 0.00 0.00 4.85
3297 3452 1.819632 GGCACCTACCAATCCAGCG 60.820 63.158 0.00 0.00 0.00 5.18
3298 3453 2.472909 GCACCTACCAATCCAGCGC 61.473 63.158 0.00 0.00 0.00 5.92
3299 3454 1.078497 CACCTACCAATCCAGCGCA 60.078 57.895 11.47 0.00 0.00 6.09
3300 3455 1.078426 ACCTACCAATCCAGCGCAC 60.078 57.895 11.47 0.00 0.00 5.34
3301 3456 1.221840 CCTACCAATCCAGCGCACT 59.778 57.895 11.47 0.00 0.00 4.40
3302 3457 0.811616 CCTACCAATCCAGCGCACTC 60.812 60.000 11.47 0.00 0.00 3.51
3303 3458 0.811616 CTACCAATCCAGCGCACTCC 60.812 60.000 11.47 0.00 0.00 3.85
3304 3459 1.264749 TACCAATCCAGCGCACTCCT 61.265 55.000 11.47 0.00 0.00 3.69
3305 3460 1.817099 CCAATCCAGCGCACTCCTC 60.817 63.158 11.47 0.00 0.00 3.71
3306 3461 1.078918 CAATCCAGCGCACTCCTCA 60.079 57.895 11.47 0.00 0.00 3.86
3307 3462 0.674581 CAATCCAGCGCACTCCTCAA 60.675 55.000 11.47 0.00 0.00 3.02
3308 3463 0.674895 AATCCAGCGCACTCCTCAAC 60.675 55.000 11.47 0.00 0.00 3.18
3309 3464 2.527951 ATCCAGCGCACTCCTCAACC 62.528 60.000 11.47 0.00 0.00 3.77
3310 3465 2.031012 CAGCGCACTCCTCAACCA 59.969 61.111 11.47 0.00 0.00 3.67
3311 3466 2.031516 CAGCGCACTCCTCAACCAG 61.032 63.158 11.47 0.00 0.00 4.00
3312 3467 2.743928 GCGCACTCCTCAACCAGG 60.744 66.667 0.30 0.00 45.15 4.45
3321 3476 3.498676 CTCAACCAGGACGTCTGTC 57.501 57.895 16.46 0.00 44.72 3.51
3322 3477 0.387367 CTCAACCAGGACGTCTGTCG 60.387 60.000 16.46 3.34 46.49 4.35
3323 3478 1.372997 CAACCAGGACGTCTGTCGG 60.373 63.158 16.46 12.74 46.49 4.79
3324 3479 2.571216 AACCAGGACGTCTGTCGGG 61.571 63.158 16.46 11.40 46.49 5.14
3325 3480 2.989824 CCAGGACGTCTGTCGGGT 60.990 66.667 16.46 0.00 46.49 5.28
3326 3481 1.676635 CCAGGACGTCTGTCGGGTA 60.677 63.158 16.46 0.00 46.49 3.69
3327 3482 1.035932 CCAGGACGTCTGTCGGGTAT 61.036 60.000 16.46 0.00 46.49 2.73
3328 3483 0.100682 CAGGACGTCTGTCGGGTATG 59.899 60.000 16.46 0.00 46.49 2.39
3329 3484 1.035932 AGGACGTCTGTCGGGTATGG 61.036 60.000 16.46 0.00 46.49 2.74
3330 3485 1.436336 GACGTCTGTCGGGTATGGG 59.564 63.158 8.70 0.00 44.69 4.00
3331 3486 2.012902 GACGTCTGTCGGGTATGGGG 62.013 65.000 8.70 0.00 44.69 4.96
3332 3487 2.504519 GTCTGTCGGGTATGGGGC 59.495 66.667 0.00 0.00 0.00 5.80
3333 3488 2.766651 TCTGTCGGGTATGGGGCC 60.767 66.667 0.00 0.00 0.00 5.80
3334 3489 4.235762 CTGTCGGGTATGGGGCCG 62.236 72.222 0.00 0.00 0.00 6.13
3340 3495 4.309950 GGTATGGGGCCGCCGTAG 62.310 72.222 18.45 0.00 0.00 3.51
3341 3496 4.982749 GTATGGGGCCGCCGTAGC 62.983 72.222 18.45 6.79 0.00 3.58
3343 3498 3.813606 TATGGGGCCGCCGTAGCTA 62.814 63.158 18.45 0.00 36.60 3.32
3347 3502 4.587189 GGCCGCCGTAGCTACCTG 62.587 72.222 18.16 10.62 36.60 4.00
3349 3504 4.587189 CCGCCGTAGCTACCTGCC 62.587 72.222 18.16 3.36 44.23 4.85
3350 3505 3.833645 CGCCGTAGCTACCTGCCA 61.834 66.667 18.16 0.00 44.23 4.92
3351 3506 2.202892 GCCGTAGCTACCTGCCAC 60.203 66.667 18.16 0.00 44.23 5.01
3355 3510 2.190756 GTAGCTACCTGCCACGAGT 58.809 57.895 13.20 0.00 44.23 4.18
3356 3511 0.100861 GTAGCTACCTGCCACGAGTC 59.899 60.000 13.20 0.00 44.23 3.36
3357 3512 1.035932 TAGCTACCTGCCACGAGTCC 61.036 60.000 0.00 0.00 44.23 3.85
3358 3513 2.646175 GCTACCTGCCACGAGTCCA 61.646 63.158 0.00 0.00 35.15 4.02
3359 3514 1.961180 GCTACCTGCCACGAGTCCAT 61.961 60.000 0.00 0.00 35.15 3.41
3360 3515 0.103208 CTACCTGCCACGAGTCCATC 59.897 60.000 0.00 0.00 0.00 3.51
3361 3516 0.324368 TACCTGCCACGAGTCCATCT 60.324 55.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 184 2.890945 GAGCCCCTTTCTGCAAAGTTTA 59.109 45.455 0.00 0.00 37.87 2.01
184 187 0.480252 AGAGCCCCTTTCTGCAAAGT 59.520 50.000 0.00 0.00 37.87 2.66
237 240 0.537188 CTTCCTACACCACCATCGCT 59.463 55.000 0.00 0.00 0.00 4.93
259 262 1.068083 AGCTATGTCGACGCCCATG 59.932 57.895 11.62 0.00 0.00 3.66
291 294 0.234884 GCACAAAAAGGAGGACGACG 59.765 55.000 0.00 0.00 0.00 5.12
322 325 4.202567 TGGACATAGAATCCCAAATAGGCC 60.203 45.833 0.00 0.00 35.12 5.19
362 365 2.926200 CGAACTACAGCCAACTCTCATG 59.074 50.000 0.00 0.00 0.00 3.07
419 422 6.019748 ACTACTCCCTACATCATATCCTTGG 58.980 44.000 0.00 0.00 0.00 3.61
435 439 6.149633 CACAAAAGCATAAACAACTACTCCC 58.850 40.000 0.00 0.00 0.00 4.30
483 487 2.198287 ACACACCAGCGTACGGACT 61.198 57.895 18.39 3.20 0.00 3.85
485 489 2.337170 CACACACCAGCGTACGGA 59.663 61.111 18.39 0.00 0.00 4.69
571 578 2.609350 CATGTTTGCCATGTAGTTGCC 58.391 47.619 0.00 0.00 44.96 4.52
612 628 8.807667 ATAAGAATTTGCACAACTTTCTCTTG 57.192 30.769 7.74 0.00 0.00 3.02
662 678 6.634805 TCAATTTTGTTTCCAAGCTTACACA 58.365 32.000 0.00 0.00 0.00 3.72
675 691 8.802267 TCTTCCTTCGGATATTCAATTTTGTTT 58.198 29.630 0.00 0.00 0.00 2.83
706 722 8.846211 CCGGTCATCCTTTGTGTAATAATTATT 58.154 33.333 14.86 14.86 0.00 1.40
710 726 5.820947 GTCCGGTCATCCTTTGTGTAATAAT 59.179 40.000 0.00 0.00 0.00 1.28
731 747 2.030805 GTGCTCAAATTGACCTGTGTCC 60.031 50.000 0.00 0.00 41.01 4.02
815 833 5.694458 GCAAACCGGACAAACTTTATTGAAT 59.306 36.000 9.46 0.00 34.38 2.57
818 836 3.738791 GGCAAACCGGACAAACTTTATTG 59.261 43.478 9.46 0.00 36.37 1.90
819 837 3.385111 TGGCAAACCGGACAAACTTTATT 59.615 39.130 9.46 0.00 39.70 1.40
820 838 2.959707 TGGCAAACCGGACAAACTTTAT 59.040 40.909 9.46 0.00 39.70 1.40
821 839 2.376109 TGGCAAACCGGACAAACTTTA 58.624 42.857 9.46 0.00 39.70 1.85
822 840 1.187087 TGGCAAACCGGACAAACTTT 58.813 45.000 9.46 0.00 39.70 2.66
823 841 1.187087 TTGGCAAACCGGACAAACTT 58.813 45.000 9.46 0.00 39.70 2.66
824 842 1.187087 TTTGGCAAACCGGACAAACT 58.813 45.000 9.46 0.00 40.73 2.66
825 843 2.011540 TTTTGGCAAACCGGACAAAC 57.988 45.000 13.10 0.00 45.05 2.93
826 844 2.762535 TTTTTGGCAAACCGGACAAA 57.237 40.000 13.10 8.60 43.77 2.83
849 867 4.007659 ACAAACTCACACTCGGTCTTTTT 58.992 39.130 0.00 0.00 0.00 1.94
850 868 3.606687 ACAAACTCACACTCGGTCTTTT 58.393 40.909 0.00 0.00 0.00 2.27
851 869 3.261981 ACAAACTCACACTCGGTCTTT 57.738 42.857 0.00 0.00 0.00 2.52
852 870 2.981859 ACAAACTCACACTCGGTCTT 57.018 45.000 0.00 0.00 0.00 3.01
853 871 4.082354 GGTATACAAACTCACACTCGGTCT 60.082 45.833 5.01 0.00 0.00 3.85
854 872 4.082354 AGGTATACAAACTCACACTCGGTC 60.082 45.833 5.01 0.00 0.00 4.79
855 873 3.830755 AGGTATACAAACTCACACTCGGT 59.169 43.478 5.01 0.00 0.00 4.69
856 874 4.451629 AGGTATACAAACTCACACTCGG 57.548 45.455 5.01 0.00 0.00 4.63
857 875 6.384224 TGTAAGGTATACAAACTCACACTCG 58.616 40.000 5.01 0.00 0.00 4.18
858 876 7.148623 GCTTGTAAGGTATACAAACTCACACTC 60.149 40.741 5.01 0.00 37.04 3.51
859 877 6.649557 GCTTGTAAGGTATACAAACTCACACT 59.350 38.462 5.01 0.00 37.04 3.55
860 878 6.128363 GGCTTGTAAGGTATACAAACTCACAC 60.128 42.308 5.01 0.00 37.04 3.82
861 879 5.935789 GGCTTGTAAGGTATACAAACTCACA 59.064 40.000 5.01 0.00 37.04 3.58
862 880 5.353400 GGGCTTGTAAGGTATACAAACTCAC 59.647 44.000 5.01 0.00 37.04 3.51
863 881 5.249852 AGGGCTTGTAAGGTATACAAACTCA 59.750 40.000 5.01 0.00 37.04 3.41
864 882 5.742063 AGGGCTTGTAAGGTATACAAACTC 58.258 41.667 5.01 0.00 37.04 3.01
865 883 5.774102 AGGGCTTGTAAGGTATACAAACT 57.226 39.130 5.01 0.00 37.04 2.66
866 884 7.926674 TTTAGGGCTTGTAAGGTATACAAAC 57.073 36.000 5.01 0.19 37.04 2.93
867 885 7.943447 TGTTTTAGGGCTTGTAAGGTATACAAA 59.057 33.333 5.01 0.00 37.04 2.83
868 886 7.460071 TGTTTTAGGGCTTGTAAGGTATACAA 58.540 34.615 5.01 1.56 36.20 2.41
869 887 7.018487 TGTTTTAGGGCTTGTAAGGTATACA 57.982 36.000 5.01 0.00 0.00 2.29
870 888 8.515695 AATGTTTTAGGGCTTGTAAGGTATAC 57.484 34.615 0.00 0.00 0.00 1.47
872 890 9.709387 ATAAATGTTTTAGGGCTTGTAAGGTAT 57.291 29.630 0.00 0.00 0.00 2.73
873 891 9.181061 GATAAATGTTTTAGGGCTTGTAAGGTA 57.819 33.333 0.00 0.00 0.00 3.08
874 892 7.123697 GGATAAATGTTTTAGGGCTTGTAAGGT 59.876 37.037 0.00 0.00 0.00 3.50
875 893 7.123547 TGGATAAATGTTTTAGGGCTTGTAAGG 59.876 37.037 0.00 0.00 0.00 2.69
876 894 8.062065 TGGATAAATGTTTTAGGGCTTGTAAG 57.938 34.615 0.00 0.00 0.00 2.34
877 895 8.423906 TTGGATAAATGTTTTAGGGCTTGTAA 57.576 30.769 0.00 0.00 0.00 2.41
878 896 7.891183 TCTTGGATAAATGTTTTAGGGCTTGTA 59.109 33.333 0.00 0.00 0.00 2.41
879 897 6.723977 TCTTGGATAAATGTTTTAGGGCTTGT 59.276 34.615 0.00 0.00 0.00 3.16
880 898 7.169158 TCTTGGATAAATGTTTTAGGGCTTG 57.831 36.000 0.00 0.00 0.00 4.01
881 899 7.790782 TTCTTGGATAAATGTTTTAGGGCTT 57.209 32.000 0.00 0.00 0.00 4.35
882 900 7.234577 TGTTTCTTGGATAAATGTTTTAGGGCT 59.765 33.333 0.00 0.00 0.00 5.19
883 901 7.382898 TGTTTCTTGGATAAATGTTTTAGGGC 58.617 34.615 0.00 0.00 0.00 5.19
884 902 8.802267 TCTGTTTCTTGGATAAATGTTTTAGGG 58.198 33.333 0.00 0.00 0.00 3.53
899 917 6.630071 TCCACTTTCTTTTTCTGTTTCTTGG 58.370 36.000 0.00 0.00 0.00 3.61
900 918 8.532977 TTTCCACTTTCTTTTTCTGTTTCTTG 57.467 30.769 0.00 0.00 0.00 3.02
901 919 9.725019 ATTTTCCACTTTCTTTTTCTGTTTCTT 57.275 25.926 0.00 0.00 0.00 2.52
902 920 9.371136 GATTTTCCACTTTCTTTTTCTGTTTCT 57.629 29.630 0.00 0.00 0.00 2.52
903 921 8.604035 GGATTTTCCACTTTCTTTTTCTGTTTC 58.396 33.333 0.00 0.00 36.28 2.78
905 923 7.851228 AGGATTTTCCACTTTCTTTTTCTGTT 58.149 30.769 0.00 0.00 39.61 3.16
906 924 7.423844 AGGATTTTCCACTTTCTTTTTCTGT 57.576 32.000 0.00 0.00 39.61 3.41
907 925 8.850156 TCTAGGATTTTCCACTTTCTTTTTCTG 58.150 33.333 0.00 0.00 39.61 3.02
908 926 8.996651 TCTAGGATTTTCCACTTTCTTTTTCT 57.003 30.769 0.00 0.00 39.61 2.52
909 927 9.847706 GATCTAGGATTTTCCACTTTCTTTTTC 57.152 33.333 0.00 0.00 39.61 2.29
910 928 9.593565 AGATCTAGGATTTTCCACTTTCTTTTT 57.406 29.630 0.00 0.00 39.61 1.94
919 937 5.649831 AGTTGCAAGATCTAGGATTTTCCAC 59.350 40.000 0.00 0.00 39.61 4.02
920 938 5.649395 CAGTTGCAAGATCTAGGATTTTCCA 59.351 40.000 0.00 0.00 39.61 3.53
927 945 1.134699 CCGCAGTTGCAAGATCTAGGA 60.135 52.381 0.00 0.00 42.21 2.94
984 1002 1.226211 CATCTCCAAAAGCAGCGCG 60.226 57.895 0.00 0.00 0.00 6.86
985 1003 1.138247 CCATCTCCAAAAGCAGCGC 59.862 57.895 0.00 0.00 0.00 5.92
987 1005 1.101331 CCTCCATCTCCAAAAGCAGC 58.899 55.000 0.00 0.00 0.00 5.25
1009 1027 1.678425 CCTCTCTTTGGCTTCTCCTGC 60.678 57.143 0.00 0.00 35.26 4.85
1010 1028 1.065564 CCCTCTCTTTGGCTTCTCCTG 60.066 57.143 0.00 0.00 35.26 3.86
1087 1126 0.179181 GACGTGGCTGAATCGTCGTA 60.179 55.000 0.00 0.00 42.84 3.43
1117 1156 2.808321 GTCGTCTTCGTTCCCCGC 60.808 66.667 0.00 0.00 38.33 6.13
1121 1160 2.129823 TGAGTTGTCGTCTTCGTTCC 57.870 50.000 0.00 0.00 38.33 3.62
1148 1187 0.541863 CAGGAACAGCTCCCCGTAAT 59.458 55.000 0.00 0.00 46.81 1.89
1149 1188 1.980052 CAGGAACAGCTCCCCGTAA 59.020 57.895 0.00 0.00 46.81 3.18
1150 1189 2.656069 GCAGGAACAGCTCCCCGTA 61.656 63.158 0.00 0.00 46.81 4.02
1152 1191 4.785453 GGCAGGAACAGCTCCCCG 62.785 72.222 0.00 0.00 46.81 5.73
1185 1224 5.008811 ACGGTACTCTTGAATAATCTCCTCG 59.991 44.000 0.00 0.00 0.00 4.63
1197 1236 3.220110 CCAGCCTATACGGTACTCTTGA 58.780 50.000 0.00 0.00 34.25 3.02
1238 1277 0.605319 ATCTTTGAAGCCGCCGAACA 60.605 50.000 0.00 0.00 0.00 3.18
1245 1284 2.854777 CGTACTCTCATCTTTGAAGCCG 59.145 50.000 0.00 0.00 0.00 5.52
1246 1285 3.851098 ACGTACTCTCATCTTTGAAGCC 58.149 45.455 0.00 0.00 0.00 4.35
1247 1286 6.365247 TGTTTACGTACTCTCATCTTTGAAGC 59.635 38.462 0.00 0.00 0.00 3.86
1295 1334 8.390354 GCTGCAAGTGATTATGCGAATTATATA 58.610 33.333 0.00 0.00 45.47 0.86
1296 1335 7.246311 GCTGCAAGTGATTATGCGAATTATAT 58.754 34.615 0.00 0.00 45.47 0.86
1297 1336 6.348458 GGCTGCAAGTGATTATGCGAATTATA 60.348 38.462 0.50 0.00 45.47 0.98
1298 1337 5.455392 GCTGCAAGTGATTATGCGAATTAT 58.545 37.500 0.00 0.00 45.47 1.28
1312 1353 6.624423 AGAAAAATTATACTGGCTGCAAGTG 58.376 36.000 19.82 0.00 35.30 3.16
1334 1375 6.558771 TTTCGATGATTGCAAAGAGAAAGA 57.441 33.333 1.71 0.00 0.00 2.52
1338 1379 4.631377 ACGATTTCGATGATTGCAAAGAGA 59.369 37.500 1.71 0.00 43.02 3.10
1344 1385 4.867608 TCAGTTACGATTTCGATGATTGCA 59.132 37.500 7.01 0.00 43.02 4.08
1467 1515 3.244976 GTTTTGTATGTGGTCAGCATGC 58.755 45.455 10.51 10.51 34.76 4.06
1535 1583 2.405172 GAGTTTCGGCTTCTCGACTTT 58.595 47.619 0.00 0.00 39.01 2.66
1725 1773 5.222631 GCAATTGGCAACCATAGTATAAGC 58.777 41.667 0.00 0.00 43.97 3.09
1781 1833 0.960364 TCAAGGGACAGAATTGCGCC 60.960 55.000 4.18 0.00 0.00 6.53
1783 1835 1.200020 GGTTCAAGGGACAGAATTGCG 59.800 52.381 0.00 0.00 0.00 4.85
1831 1883 2.859404 TCCATCTCCAGACCCTCTCTTA 59.141 50.000 0.00 0.00 0.00 2.10
1839 1891 2.496899 TGCTTTTCCATCTCCAGACC 57.503 50.000 0.00 0.00 0.00 3.85
1942 1994 0.174162 CCCCAAGCTGCTTACAATGC 59.826 55.000 15.51 0.00 0.00 3.56
1968 2020 3.083349 TCAGGATGGTGGCCTCGG 61.083 66.667 3.32 0.00 36.16 4.63
1978 2030 4.202080 CCCATAATTTGCACACTCAGGATG 60.202 45.833 0.00 0.00 37.54 3.51
2011 2067 0.250513 ACTTTCCCTGCAGATCGACC 59.749 55.000 17.39 0.00 0.00 4.79
2045 2101 1.071314 TTCTTCAAGGGGGAAGGCCA 61.071 55.000 5.01 0.00 43.52 5.36
2046 2102 0.336392 ATTCTTCAAGGGGGAAGGCC 59.664 55.000 0.00 0.00 43.52 5.19
2047 2103 2.234661 CAAATTCTTCAAGGGGGAAGGC 59.765 50.000 3.37 0.00 43.52 4.35
2049 2105 3.897505 ACACAAATTCTTCAAGGGGGAAG 59.102 43.478 0.00 0.00 44.46 3.46
2050 2106 3.922375 ACACAAATTCTTCAAGGGGGAA 58.078 40.909 0.00 0.00 0.00 3.97
2051 2107 3.611025 ACACAAATTCTTCAAGGGGGA 57.389 42.857 0.00 0.00 0.00 4.81
2052 2108 3.803368 GCAACACAAATTCTTCAAGGGGG 60.803 47.826 0.00 0.00 0.00 5.40
2104 2160 5.684704 ACGAATGTTACCATCTTGATCCAT 58.315 37.500 0.00 0.00 0.00 3.41
2126 2182 1.014352 AACAACACGCCTTGACAGAC 58.986 50.000 0.00 0.00 0.00 3.51
2225 2284 3.521560 GATTCGAACACAGCATCACCTA 58.478 45.455 0.00 0.00 0.00 3.08
2245 2304 2.258013 CGCCGCTGTCCTTTTTGGA 61.258 57.895 0.00 0.00 43.86 3.53
2253 2312 1.805945 CTCTGTTACGCCGCTGTCC 60.806 63.158 0.00 0.00 0.00 4.02
2257 2316 0.601558 TCTTTCTCTGTTACGCCGCT 59.398 50.000 0.00 0.00 0.00 5.52
2328 2387 2.618053 AGACGCTTCGACCAAATAAGG 58.382 47.619 0.00 0.00 0.00 2.69
2340 2399 0.896226 AACCCTGGAGTAGACGCTTC 59.104 55.000 0.00 0.00 0.00 3.86
2345 2404 7.333672 CACTTTAATGTTAACCCTGGAGTAGAC 59.666 40.741 2.48 0.00 0.00 2.59
2378 2530 6.652900 GGAAGGATATTTCTGAATGGAGTAGC 59.347 42.308 0.00 0.00 0.00 3.58
2427 2579 2.749076 GCCAGCAAGAACATATGACACA 59.251 45.455 10.38 0.00 0.00 3.72
2527 2680 0.394565 CCGGGTCCAAGATCATCTCC 59.605 60.000 0.00 0.00 0.00 3.71
2533 2686 0.179108 CGACTTCCGGGTCCAAGATC 60.179 60.000 0.00 0.00 33.07 2.75
2545 2698 3.195661 AGTTTCACAAGACACGACTTCC 58.804 45.455 0.00 0.00 29.82 3.46
2593 2746 4.212716 ACATCCATACAGAAGTAGCCGTA 58.787 43.478 0.00 0.00 32.86 4.02
2594 2747 3.031736 ACATCCATACAGAAGTAGCCGT 58.968 45.455 0.00 0.00 32.86 5.68
2656 2811 8.686334 GTGTCAAAATGGTTCTTATATGATGGT 58.314 33.333 0.00 0.00 0.00 3.55
2724 2879 9.352191 ACGGACACTACTAATCAATAGATACTT 57.648 33.333 0.00 0.00 35.47 2.24
2733 2888 4.456911 ACGAGAACGGACACTACTAATCAA 59.543 41.667 0.00 0.00 44.46 2.57
2747 2902 2.349155 GGTAAAAACAGCACGAGAACGG 60.349 50.000 0.00 0.00 44.46 4.44
2788 2943 9.570468 ACTAGCACATCATCATTCTATCAAAAT 57.430 29.630 0.00 0.00 0.00 1.82
2798 2953 6.051717 GTCCAGTAACTAGCACATCATCATT 58.948 40.000 0.00 0.00 0.00 2.57
2870 3025 7.971455 ACAATCATATGAATCATGCGACATAG 58.029 34.615 9.99 0.00 0.00 2.23
2872 3027 6.812879 ACAATCATATGAATCATGCGACAT 57.187 33.333 9.99 0.00 0.00 3.06
2903 3058 2.744202 GTTGACGAAATCACCTGCTCAT 59.256 45.455 0.00 0.00 36.92 2.90
2924 3079 3.436704 ACAATTGTACGAACCATGCTGAG 59.563 43.478 9.97 0.00 0.00 3.35
2954 3109 4.285292 CATTCATGAAATAACCTGCTCGC 58.715 43.478 13.09 0.00 0.00 5.03
2970 3125 7.500720 TCTATCATGAAATTGACGCATTCAT 57.499 32.000 0.00 0.00 42.80 2.57
3024 3179 5.778241 GGGGGTCATCCTCTTTTTCTAAAAA 59.222 40.000 1.05 1.05 33.94 1.94
3025 3180 5.330233 GGGGGTCATCCTCTTTTTCTAAAA 58.670 41.667 0.00 0.00 33.94 1.52
3026 3181 4.566907 CGGGGGTCATCCTCTTTTTCTAAA 60.567 45.833 0.00 0.00 33.94 1.85
3027 3182 3.054655 CGGGGGTCATCCTCTTTTTCTAA 60.055 47.826 0.00 0.00 33.94 2.10
3028 3183 2.504175 CGGGGGTCATCCTCTTTTTCTA 59.496 50.000 0.00 0.00 33.94 2.10
3029 3184 1.282157 CGGGGGTCATCCTCTTTTTCT 59.718 52.381 0.00 0.00 33.94 2.52
3030 3185 1.682087 CCGGGGGTCATCCTCTTTTTC 60.682 57.143 0.00 0.00 33.94 2.29
3031 3186 0.331616 CCGGGGGTCATCCTCTTTTT 59.668 55.000 0.00 0.00 33.94 1.94
3032 3187 1.999346 CCGGGGGTCATCCTCTTTT 59.001 57.895 0.00 0.00 33.94 2.27
3033 3188 2.680370 GCCGGGGGTCATCCTCTTT 61.680 63.158 2.18 0.00 33.94 2.52
3034 3189 3.090532 GCCGGGGGTCATCCTCTT 61.091 66.667 2.18 0.00 33.94 2.85
3039 3194 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
3045 3200 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
3046 3201 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
3047 3202 3.473647 TCCAGATGCAGAGGCCGG 61.474 66.667 0.00 0.00 40.13 6.13
3048 3203 2.202987 GTCCAGATGCAGAGGCCG 60.203 66.667 0.00 0.00 40.13 6.13
3049 3204 2.037620 ATCGTCCAGATGCAGAGGCC 62.038 60.000 0.00 0.00 38.36 5.19
3050 3205 1.445095 ATCGTCCAGATGCAGAGGC 59.555 57.895 0.00 0.00 38.36 4.70
3058 3213 1.000163 GACCGTATGCATCGTCCAGAT 60.000 52.381 0.19 0.00 41.01 2.90
3059 3214 0.384309 GACCGTATGCATCGTCCAGA 59.616 55.000 0.19 0.00 0.00 3.86
3060 3215 0.102300 TGACCGTATGCATCGTCCAG 59.898 55.000 0.19 0.00 0.00 3.86
3061 3216 0.179121 GTGACCGTATGCATCGTCCA 60.179 55.000 0.19 4.52 0.00 4.02
3062 3217 0.102481 AGTGACCGTATGCATCGTCC 59.898 55.000 0.19 2.71 0.00 4.79
3063 3218 1.922570 AAGTGACCGTATGCATCGTC 58.077 50.000 0.19 8.48 0.00 4.20
3064 3219 2.380084 AAAGTGACCGTATGCATCGT 57.620 45.000 0.19 0.00 0.00 3.73
3065 3220 6.519353 TTAATAAAGTGACCGTATGCATCG 57.481 37.500 0.19 7.03 0.00 3.84
3073 3228 9.661563 TGTGAGAATAATTAATAAAGTGACCGT 57.338 29.630 0.00 0.00 0.00 4.83
3092 3247 9.871238 GTATGACTTTATAAGGTCTTGTGAGAA 57.129 33.333 23.46 6.07 32.66 2.87
3093 3248 9.031537 TGTATGACTTTATAAGGTCTTGTGAGA 57.968 33.333 23.46 6.69 34.01 3.27
3094 3249 9.653287 TTGTATGACTTTATAAGGTCTTGTGAG 57.347 33.333 23.46 2.10 34.01 3.51
3095 3250 9.431887 GTTGTATGACTTTATAAGGTCTTGTGA 57.568 33.333 23.46 7.91 34.01 3.58
3096 3251 9.214957 TGTTGTATGACTTTATAAGGTCTTGTG 57.785 33.333 23.46 0.00 34.01 3.33
3097 3252 9.436957 CTGTTGTATGACTTTATAAGGTCTTGT 57.563 33.333 23.46 14.25 34.01 3.16
3098 3253 9.436957 ACTGTTGTATGACTTTATAAGGTCTTG 57.563 33.333 23.46 10.41 34.01 3.02
3112 3267 5.348997 GGCTTCAGTCTTACTGTTGTATGAC 59.651 44.000 6.93 11.70 46.03 3.06
3113 3268 5.011635 TGGCTTCAGTCTTACTGTTGTATGA 59.988 40.000 6.93 0.00 46.03 2.15
3114 3269 5.120830 GTGGCTTCAGTCTTACTGTTGTATG 59.879 44.000 6.93 0.00 46.03 2.39
3115 3270 5.238583 GTGGCTTCAGTCTTACTGTTGTAT 58.761 41.667 6.93 0.00 46.03 2.29
3116 3271 4.502604 GGTGGCTTCAGTCTTACTGTTGTA 60.503 45.833 6.93 0.00 46.03 2.41
3117 3272 3.467803 GTGGCTTCAGTCTTACTGTTGT 58.532 45.455 6.93 0.00 46.03 3.32
3118 3273 2.808543 GGTGGCTTCAGTCTTACTGTTG 59.191 50.000 6.93 3.17 46.03 3.33
3119 3274 2.548067 CGGTGGCTTCAGTCTTACTGTT 60.548 50.000 6.93 0.00 46.03 3.16
3120 3275 1.000955 CGGTGGCTTCAGTCTTACTGT 59.999 52.381 6.93 0.00 46.03 3.55
3122 3277 1.272769 GACGGTGGCTTCAGTCTTACT 59.727 52.381 0.00 0.00 31.74 2.24
3123 3278 1.272769 AGACGGTGGCTTCAGTCTTAC 59.727 52.381 9.22 0.00 39.12 2.34
3124 3279 1.629043 AGACGGTGGCTTCAGTCTTA 58.371 50.000 9.22 0.00 39.12 2.10
3125 3280 1.629043 TAGACGGTGGCTTCAGTCTT 58.371 50.000 16.65 6.26 41.47 3.01
3126 3281 1.546476 CTTAGACGGTGGCTTCAGTCT 59.454 52.381 16.03 16.03 43.08 3.24
3127 3282 1.997669 CTTAGACGGTGGCTTCAGTC 58.002 55.000 0.00 5.74 33.90 3.51
3128 3283 0.037232 GCTTAGACGGTGGCTTCAGT 60.037 55.000 0.00 0.00 0.00 3.41
3129 3284 0.037326 TGCTTAGACGGTGGCTTCAG 60.037 55.000 0.00 0.00 0.00 3.02
3130 3285 0.394938 TTGCTTAGACGGTGGCTTCA 59.605 50.000 0.00 0.00 0.00 3.02
3131 3286 1.519408 TTTGCTTAGACGGTGGCTTC 58.481 50.000 0.00 0.00 0.00 3.86
3132 3287 1.975660 TTTTGCTTAGACGGTGGCTT 58.024 45.000 0.00 0.00 0.00 4.35
3133 3288 1.607148 GTTTTTGCTTAGACGGTGGCT 59.393 47.619 0.00 0.00 0.00 4.75
3134 3289 1.607148 AGTTTTTGCTTAGACGGTGGC 59.393 47.619 0.00 0.00 0.00 5.01
3135 3290 2.616842 ACAGTTTTTGCTTAGACGGTGG 59.383 45.455 0.00 0.00 0.00 4.61
3136 3291 3.603857 CGACAGTTTTTGCTTAGACGGTG 60.604 47.826 0.00 0.00 0.00 4.94
3137 3292 2.542595 CGACAGTTTTTGCTTAGACGGT 59.457 45.455 0.00 0.00 0.00 4.83
3138 3293 2.661979 GCGACAGTTTTTGCTTAGACGG 60.662 50.000 0.00 0.00 0.00 4.79
3139 3294 2.221055 AGCGACAGTTTTTGCTTAGACG 59.779 45.455 0.00 0.00 31.61 4.18
3140 3295 3.879932 AGCGACAGTTTTTGCTTAGAC 57.120 42.857 0.00 0.00 31.61 2.59
3141 3296 4.210537 GTGTAGCGACAGTTTTTGCTTAGA 59.789 41.667 0.00 0.00 37.43 2.10
3142 3297 4.455124 GTGTAGCGACAGTTTTTGCTTAG 58.545 43.478 0.00 0.00 37.43 2.18
3143 3298 3.249080 GGTGTAGCGACAGTTTTTGCTTA 59.751 43.478 0.00 0.00 37.43 3.09
3144 3299 2.032924 GGTGTAGCGACAGTTTTTGCTT 59.967 45.455 0.00 0.00 37.43 3.91
3145 3300 1.602377 GGTGTAGCGACAGTTTTTGCT 59.398 47.619 0.00 0.00 39.69 3.91
3146 3301 1.602377 AGGTGTAGCGACAGTTTTTGC 59.398 47.619 0.00 0.00 35.82 3.68
3147 3302 4.092968 GGATAGGTGTAGCGACAGTTTTTG 59.907 45.833 0.00 0.00 35.82 2.44
3148 3303 4.251268 GGATAGGTGTAGCGACAGTTTTT 58.749 43.478 0.00 0.00 35.82 1.94
3149 3304 3.259876 TGGATAGGTGTAGCGACAGTTTT 59.740 43.478 0.00 0.00 35.82 2.43
3150 3305 2.829720 TGGATAGGTGTAGCGACAGTTT 59.170 45.455 0.00 0.00 35.82 2.66
3151 3306 2.453521 TGGATAGGTGTAGCGACAGTT 58.546 47.619 0.00 0.00 35.82 3.16
3152 3307 2.139323 TGGATAGGTGTAGCGACAGT 57.861 50.000 0.00 0.00 35.82 3.55
3153 3308 3.735237 ATTGGATAGGTGTAGCGACAG 57.265 47.619 0.00 0.00 35.82 3.51
3154 3309 3.449377 TCAATTGGATAGGTGTAGCGACA 59.551 43.478 5.42 0.00 0.00 4.35
3155 3310 4.054780 TCAATTGGATAGGTGTAGCGAC 57.945 45.455 5.42 0.00 0.00 5.19
3156 3311 4.343814 TCATCAATTGGATAGGTGTAGCGA 59.656 41.667 5.42 0.00 33.95 4.93
3157 3312 4.631131 TCATCAATTGGATAGGTGTAGCG 58.369 43.478 5.42 0.00 33.95 4.26
3158 3313 5.413833 CCATCATCAATTGGATAGGTGTAGC 59.586 44.000 5.42 0.00 34.81 3.58
3159 3314 6.772605 TCCATCATCAATTGGATAGGTGTAG 58.227 40.000 5.42 0.00 37.10 2.74
3160 3315 6.745190 GCTCCATCATCAATTGGATAGGTGTA 60.745 42.308 5.42 0.00 41.09 2.90
3161 3316 5.628130 CTCCATCATCAATTGGATAGGTGT 58.372 41.667 5.42 0.00 41.09 4.16
3162 3317 4.458295 GCTCCATCATCAATTGGATAGGTG 59.542 45.833 5.42 7.78 41.09 4.00
3163 3318 4.660168 GCTCCATCATCAATTGGATAGGT 58.340 43.478 5.42 0.00 41.09 3.08
3164 3319 3.688185 CGCTCCATCATCAATTGGATAGG 59.312 47.826 5.42 6.30 41.09 2.57
3165 3320 3.126514 GCGCTCCATCATCAATTGGATAG 59.873 47.826 5.42 0.00 41.09 2.08
3166 3321 3.076621 GCGCTCCATCATCAATTGGATA 58.923 45.455 5.42 0.00 41.09 2.59
3167 3322 1.884579 GCGCTCCATCATCAATTGGAT 59.115 47.619 5.42 0.00 41.09 3.41
3168 3323 1.134007 AGCGCTCCATCATCAATTGGA 60.134 47.619 2.64 0.00 39.70 3.53
3169 3324 1.001706 CAGCGCTCCATCATCAATTGG 60.002 52.381 7.13 0.00 0.00 3.16
3170 3325 1.944709 TCAGCGCTCCATCATCAATTG 59.055 47.619 7.13 0.00 0.00 2.32
3171 3326 2.336945 TCAGCGCTCCATCATCAATT 57.663 45.000 7.13 0.00 0.00 2.32
3172 3327 2.563261 ATCAGCGCTCCATCATCAAT 57.437 45.000 7.13 0.00 0.00 2.57
3173 3328 2.366590 ACTATCAGCGCTCCATCATCAA 59.633 45.455 7.13 0.00 0.00 2.57
3174 3329 1.966354 ACTATCAGCGCTCCATCATCA 59.034 47.619 7.13 0.00 0.00 3.07
3175 3330 2.230992 AGACTATCAGCGCTCCATCATC 59.769 50.000 7.13 0.92 0.00 2.92
3176 3331 2.029200 CAGACTATCAGCGCTCCATCAT 60.029 50.000 7.13 0.00 0.00 2.45
3177 3332 1.339291 CAGACTATCAGCGCTCCATCA 59.661 52.381 7.13 0.00 0.00 3.07
3178 3333 1.336702 CCAGACTATCAGCGCTCCATC 60.337 57.143 7.13 0.69 0.00 3.51
3179 3334 0.678395 CCAGACTATCAGCGCTCCAT 59.322 55.000 7.13 5.09 0.00 3.41
3180 3335 1.395045 CCCAGACTATCAGCGCTCCA 61.395 60.000 7.13 0.00 0.00 3.86
3181 3336 1.365633 CCCAGACTATCAGCGCTCC 59.634 63.158 7.13 0.00 0.00 4.70
3182 3337 1.300542 GCCCAGACTATCAGCGCTC 60.301 63.158 7.13 0.00 0.00 5.03
3183 3338 2.801631 GGCCCAGACTATCAGCGCT 61.802 63.158 2.64 2.64 0.00 5.92
3184 3339 1.464376 TAGGCCCAGACTATCAGCGC 61.464 60.000 0.00 0.00 0.00 5.92
3185 3340 1.040646 TTAGGCCCAGACTATCAGCG 58.959 55.000 0.00 0.00 0.00 5.18
3186 3341 3.055747 GGTATTAGGCCCAGACTATCAGC 60.056 52.174 0.00 0.00 0.00 4.26
3187 3342 4.160329 TGGTATTAGGCCCAGACTATCAG 58.840 47.826 0.00 0.00 0.00 2.90
3188 3343 4.207698 TGGTATTAGGCCCAGACTATCA 57.792 45.455 0.00 0.00 0.00 2.15
3189 3344 5.163237 TGTTTGGTATTAGGCCCAGACTATC 60.163 44.000 0.00 0.00 36.91 2.08
3190 3345 4.724798 TGTTTGGTATTAGGCCCAGACTAT 59.275 41.667 0.00 0.00 36.91 2.12
3191 3346 4.105577 TGTTTGGTATTAGGCCCAGACTA 58.894 43.478 0.00 0.00 36.91 2.59
3192 3347 2.916934 TGTTTGGTATTAGGCCCAGACT 59.083 45.455 0.00 0.00 36.91 3.24
3193 3348 3.054655 TCTGTTTGGTATTAGGCCCAGAC 60.055 47.826 0.00 0.00 36.61 3.51
3194 3349 3.054655 GTCTGTTTGGTATTAGGCCCAGA 60.055 47.826 0.00 0.00 31.04 3.86
3195 3350 3.279434 GTCTGTTTGGTATTAGGCCCAG 58.721 50.000 0.00 0.00 31.04 4.45
3196 3351 2.645297 TGTCTGTTTGGTATTAGGCCCA 59.355 45.455 0.00 0.00 0.00 5.36
3197 3352 3.014623 GTGTCTGTTTGGTATTAGGCCC 58.985 50.000 0.00 0.00 0.00 5.80
3198 3353 3.014623 GGTGTCTGTTTGGTATTAGGCC 58.985 50.000 0.00 0.00 0.00 5.19
3199 3354 2.676342 CGGTGTCTGTTTGGTATTAGGC 59.324 50.000 0.00 0.00 0.00 3.93
3200 3355 2.676342 GCGGTGTCTGTTTGGTATTAGG 59.324 50.000 0.00 0.00 0.00 2.69
3201 3356 3.331150 TGCGGTGTCTGTTTGGTATTAG 58.669 45.455 0.00 0.00 0.00 1.73
3202 3357 3.331150 CTGCGGTGTCTGTTTGGTATTA 58.669 45.455 0.00 0.00 0.00 0.98
3203 3358 2.151202 CTGCGGTGTCTGTTTGGTATT 58.849 47.619 0.00 0.00 0.00 1.89
3204 3359 1.808411 CTGCGGTGTCTGTTTGGTAT 58.192 50.000 0.00 0.00 0.00 2.73
3205 3360 0.882927 GCTGCGGTGTCTGTTTGGTA 60.883 55.000 0.00 0.00 0.00 3.25
3206 3361 2.186826 GCTGCGGTGTCTGTTTGGT 61.187 57.895 0.00 0.00 0.00 3.67
3207 3362 2.639286 GCTGCGGTGTCTGTTTGG 59.361 61.111 0.00 0.00 0.00 3.28
3208 3363 1.723608 TTGGCTGCGGTGTCTGTTTG 61.724 55.000 0.00 0.00 0.00 2.93
3209 3364 1.034838 TTTGGCTGCGGTGTCTGTTT 61.035 50.000 0.00 0.00 0.00 2.83
3210 3365 1.453015 TTTGGCTGCGGTGTCTGTT 60.453 52.632 0.00 0.00 0.00 3.16
3211 3366 2.186826 GTTTGGCTGCGGTGTCTGT 61.187 57.895 0.00 0.00 0.00 3.41
3212 3367 2.639286 GTTTGGCTGCGGTGTCTG 59.361 61.111 0.00 0.00 0.00 3.51
3213 3368 1.764571 TAGGTTTGGCTGCGGTGTCT 61.765 55.000 0.00 0.00 0.00 3.41
3214 3369 0.887387 TTAGGTTTGGCTGCGGTGTC 60.887 55.000 0.00 0.00 0.00 3.67
3215 3370 0.466555 TTTAGGTTTGGCTGCGGTGT 60.467 50.000 0.00 0.00 0.00 4.16
3216 3371 0.039527 GTTTAGGTTTGGCTGCGGTG 60.040 55.000 0.00 0.00 0.00 4.94
3217 3372 1.512156 CGTTTAGGTTTGGCTGCGGT 61.512 55.000 0.00 0.00 0.00 5.68
3218 3373 1.209127 CGTTTAGGTTTGGCTGCGG 59.791 57.895 0.00 0.00 0.00 5.69
3219 3374 0.110373 GACGTTTAGGTTTGGCTGCG 60.110 55.000 0.00 0.00 0.00 5.18
3220 3375 1.235724 AGACGTTTAGGTTTGGCTGC 58.764 50.000 0.00 0.00 0.00 5.25
3221 3376 4.151867 GTCTTAGACGTTTAGGTTTGGCTG 59.848 45.833 0.00 0.00 0.00 4.85
3222 3377 4.313282 GTCTTAGACGTTTAGGTTTGGCT 58.687 43.478 0.00 0.00 0.00 4.75
3223 3378 3.434641 GGTCTTAGACGTTTAGGTTTGGC 59.565 47.826 6.27 0.00 32.65 4.52
3224 3379 3.999001 GGGTCTTAGACGTTTAGGTTTGG 59.001 47.826 6.27 0.00 32.65 3.28
3225 3380 3.676646 CGGGTCTTAGACGTTTAGGTTTG 59.323 47.826 6.27 0.00 32.65 2.93
3226 3381 3.573967 TCGGGTCTTAGACGTTTAGGTTT 59.426 43.478 6.27 0.00 32.65 3.27
3227 3382 3.157087 TCGGGTCTTAGACGTTTAGGTT 58.843 45.455 6.27 0.00 32.65 3.50
3228 3383 2.751806 CTCGGGTCTTAGACGTTTAGGT 59.248 50.000 6.27 0.00 32.65 3.08
3229 3384 2.098770 CCTCGGGTCTTAGACGTTTAGG 59.901 54.545 6.27 6.76 32.65 2.69
3230 3385 2.751806 ACCTCGGGTCTTAGACGTTTAG 59.248 50.000 6.27 1.66 32.65 1.85
3231 3386 2.795329 ACCTCGGGTCTTAGACGTTTA 58.205 47.619 6.27 0.00 32.65 2.01
3232 3387 1.625511 ACCTCGGGTCTTAGACGTTT 58.374 50.000 6.27 0.00 32.65 3.60
3233 3388 3.353342 ACCTCGGGTCTTAGACGTT 57.647 52.632 6.27 0.00 32.65 3.99
3243 3398 2.928396 CTGGTTGGGACCTCGGGT 60.928 66.667 0.00 0.00 46.66 5.28
3244 3399 3.717294 CCTGGTTGGGACCTCGGG 61.717 72.222 0.00 0.00 46.66 5.14
3245 3400 2.606519 TCCTGGTTGGGACCTCGG 60.607 66.667 0.00 0.00 46.66 4.63
3259 3414 2.365635 ATACCAGGCAGGCGTCCT 60.366 61.111 0.00 0.00 43.14 3.85
3260 3415 2.203070 CATACCAGGCAGGCGTCC 60.203 66.667 0.00 0.00 43.14 4.79
3261 3416 2.203070 CCATACCAGGCAGGCGTC 60.203 66.667 0.00 0.00 43.14 5.19
3262 3417 3.797353 CCCATACCAGGCAGGCGT 61.797 66.667 0.00 0.00 43.14 5.68
3263 3418 4.569180 CCCCATACCAGGCAGGCG 62.569 72.222 0.00 0.00 43.14 5.52
3269 3424 1.705997 GGTAGGTGCCCCATACCAGG 61.706 65.000 8.87 0.00 40.74 4.45
3270 3425 0.986019 TGGTAGGTGCCCCATACCAG 60.986 60.000 11.63 0.00 38.50 4.00
3271 3426 0.550393 TTGGTAGGTGCCCCATACCA 60.550 55.000 11.63 11.63 40.11 3.25
3272 3427 0.850784 ATTGGTAGGTGCCCCATACC 59.149 55.000 7.24 7.24 36.14 2.73
3273 3428 1.202891 GGATTGGTAGGTGCCCCATAC 60.203 57.143 0.00 0.00 0.00 2.39
3274 3429 1.145571 GGATTGGTAGGTGCCCCATA 58.854 55.000 0.00 0.00 0.00 2.74
3275 3430 0.923729 TGGATTGGTAGGTGCCCCAT 60.924 55.000 0.00 0.00 0.00 4.00
3276 3431 1.542628 TGGATTGGTAGGTGCCCCA 60.543 57.895 0.00 0.00 0.00 4.96
3277 3432 1.227383 CTGGATTGGTAGGTGCCCC 59.773 63.158 0.00 0.00 0.00 5.80
3278 3433 1.453928 GCTGGATTGGTAGGTGCCC 60.454 63.158 0.00 0.00 0.00 5.36
3279 3434 1.819632 CGCTGGATTGGTAGGTGCC 60.820 63.158 0.00 0.00 0.00 5.01
3280 3435 2.472909 GCGCTGGATTGGTAGGTGC 61.473 63.158 0.00 0.00 0.00 5.01
3281 3436 1.078497 TGCGCTGGATTGGTAGGTG 60.078 57.895 9.73 0.00 0.00 4.00
3282 3437 1.078426 GTGCGCTGGATTGGTAGGT 60.078 57.895 9.73 0.00 0.00 3.08
3283 3438 0.811616 GAGTGCGCTGGATTGGTAGG 60.812 60.000 3.44 0.00 0.00 3.18
3284 3439 0.811616 GGAGTGCGCTGGATTGGTAG 60.812 60.000 3.44 0.00 0.00 3.18
3285 3440 1.220749 GGAGTGCGCTGGATTGGTA 59.779 57.895 3.44 0.00 0.00 3.25
3286 3441 2.045926 GGAGTGCGCTGGATTGGT 60.046 61.111 3.44 0.00 0.00 3.67
3287 3442 1.817099 GAGGAGTGCGCTGGATTGG 60.817 63.158 3.44 0.00 0.00 3.16
3288 3443 0.674581 TTGAGGAGTGCGCTGGATTG 60.675 55.000 3.44 0.00 0.00 2.67
3289 3444 0.674895 GTTGAGGAGTGCGCTGGATT 60.675 55.000 3.44 0.00 0.00 3.01
3290 3445 1.078848 GTTGAGGAGTGCGCTGGAT 60.079 57.895 3.44 0.00 0.00 3.41
3291 3446 2.343758 GTTGAGGAGTGCGCTGGA 59.656 61.111 3.44 0.00 0.00 3.86
3292 3447 2.743928 GGTTGAGGAGTGCGCTGG 60.744 66.667 3.44 0.00 0.00 4.85
3293 3448 2.031012 TGGTTGAGGAGTGCGCTG 59.969 61.111 3.44 0.00 0.00 5.18
3294 3449 2.345244 CTGGTTGAGGAGTGCGCT 59.655 61.111 9.73 0.00 0.00 5.92
3295 3450 2.743928 CCTGGTTGAGGAGTGCGC 60.744 66.667 0.00 0.00 46.33 6.09
3296 3451 3.059982 TCCTGGTTGAGGAGTGCG 58.940 61.111 0.00 0.00 46.96 5.34
3302 3457 4.996976 CAGACGTCCTGGTTGAGG 57.003 61.111 13.01 0.00 44.45 3.86
3310 3465 1.035932 CCATACCCGACAGACGTCCT 61.036 60.000 13.01 0.00 39.11 3.85
3311 3466 1.436336 CCATACCCGACAGACGTCC 59.564 63.158 13.01 0.00 39.11 4.79
3312 3467 1.436336 CCCATACCCGACAGACGTC 59.564 63.158 7.70 7.70 40.78 4.34
3313 3468 2.056223 CCCCATACCCGACAGACGT 61.056 63.158 0.00 0.00 40.78 4.34
3314 3469 2.812499 CCCCATACCCGACAGACG 59.188 66.667 0.00 0.00 42.18 4.18
3315 3470 2.504519 GCCCCATACCCGACAGAC 59.495 66.667 0.00 0.00 0.00 3.51
3316 3471 2.766651 GGCCCCATACCCGACAGA 60.767 66.667 0.00 0.00 0.00 3.41
3323 3478 4.309950 CTACGGCGGCCCCATACC 62.310 72.222 14.55 0.00 0.00 2.73
3324 3479 4.982749 GCTACGGCGGCCCCATAC 62.983 72.222 14.55 0.00 0.00 2.39
3325 3480 3.813606 TAGCTACGGCGGCCCCATA 62.814 63.158 14.55 2.76 44.37 2.74
3330 3485 4.587189 CAGGTAGCTACGGCGGCC 62.587 72.222 17.48 9.54 44.37 6.13
3332 3487 4.587189 GGCAGGTAGCTACGGCGG 62.587 72.222 24.20 12.46 44.79 6.13
3333 3488 3.833645 TGGCAGGTAGCTACGGCG 61.834 66.667 24.20 4.80 44.79 6.46
3334 3489 2.202892 GTGGCAGGTAGCTACGGC 60.203 66.667 23.55 23.55 45.00 5.68
3338 3493 1.035932 GGACTCGTGGCAGGTAGCTA 61.036 60.000 7.12 0.00 44.79 3.32
3339 3494 2.352032 GGACTCGTGGCAGGTAGCT 61.352 63.158 7.12 0.00 44.79 3.32
3340 3495 1.961180 ATGGACTCGTGGCAGGTAGC 61.961 60.000 7.12 0.00 44.65 3.58
3341 3496 0.103208 GATGGACTCGTGGCAGGTAG 59.897 60.000 7.12 6.16 0.00 3.18
3342 3497 0.324368 AGATGGACTCGTGGCAGGTA 60.324 55.000 7.12 0.00 0.00 3.08
3343 3498 1.610673 AGATGGACTCGTGGCAGGT 60.611 57.895 7.12 0.00 0.00 4.00
3344 3499 3.303189 AGATGGACTCGTGGCAGG 58.697 61.111 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.