>input_sequence_53537
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---------------------------------------------------------ATGGAGGTGGCAGGAGAAGCCAA
AGAGAGGGCCGGCGGAGAATCCGCGGAGCGCCGCCGCAAGGAGGCCAAATCCTCT---------------------TCTG
GGATCTACGACGATTCAGCCACGTCGGAGCAGATCGCGGGGAACGAAGACGACAACTCAATGGATCATTACGGGGAGCTG
TTCCTGCCCGAGTACTTGACGGACGAGGAGATTATTCAAGAGTACCGTATAGGCTGGGAATGCCGGTGCTATGGCATGTT
CGGCGGCTTCAAAGATGAGAGTACGTAAACAATATACGCACTTTTACCTGAGTTATATA--ATTCGCATAATCACTTGCA
GCCAGTATAATTTTTCTTTCTCTTTGCAATCATCGAAATCGTAACTGAAGAATTTT--TTCCGTTTCTGTGTATTATTAT
TATGTTTCTTGCTGAGAGACCTTAT--GCTGTACTATAACACACGCTTTGTG---TATGCAGCGACGATCAAGAGCATGC
TGACCACATACAAAACCATCCCACATGCTTTGGTCTCCCACACCTTGCAAGTCTACTCCATCAAAGTCGAGAAGCCGAAA
CTCGGGTGGCCACTTCGTGTCTATGGCATGGTTGCTGCCCGAGACCATGTGGATTATAATCGCAACTTTCTCTTCAATCG
CACAAGCGATAACTGCCAAATCATTACTGCAGATGTATACATTCCTCTTCCCTGCTTGTGGTGGGTTCATTGGCTTTGCC
ATATAAATTGTTGCTTATACTATGGTTGCCAATTGC----AGGAGCCCTACTTGACGCTGACTGGCCCCTCTGGCGCAAT
TCTGTCCCTTGAACCTGTTGACTTTGAAGTTGATCTTAAGTTTAAGAGAGGGTCTGGAGATGGAAAAGCATTGATCAACC
AAGTCCTCCGATACCAACGGAGCCCCGGTCCTTTCGGTACAATCTTGGACAACAACCTTTGCACCATAAGATTGCATTGT
AAGCAGCTTGGGGAAGCAGCCGAGGCCACCATCCTGAGTGTGCAAATTAT----GGGTCATGGCCTGGTCGATCTGCAGG
GAAAGTTTTTTGCCACGGTGTGGCCTTCCCCCTTGAAGAATTTGTGTTGCTTGCTTTTCCAGACGGAGATAATCCGCCGA
TGGATCAAGATGGTAACATTCGTCTGTCAAGGCGTGTTGTTTCTGTAGATGTGAACCAAAACTTCCAAGTTTCTGTACAG
GCCTACTCTGCATGTGGT---AGCTTGAAAGTACCCATTGCAATAGGTGATGCTGTGTTCGAATCCAAAAAGGACAGCGG
CGTAACAGAGAAAGAATGTGACATTGGTGCTAGCTGCAGGGTCAAGATTAAAGTGGCTTGGTCTCTCCTTATTTGGTCGA
AGCGTCTACTCCAGGGTTAA------------------------------------------------------------
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>chr3B_1_TraesCS3B01G142000
TGTTTTGGTTCAG-TTTTTTCATCATTTCTACTCAAGGTGGCGAAGGGTTTCCTTGTGATCGGCGCGGCACCAATCTTCT
GGGTGTTATGGAAGACCAAGAATAAATCCTGCTTTAAATGTGTTCGTCCTGGAGGTCCAACCACTGTAGTTTTT-TATGT
TTGTCAGTTCTTAACATCTTGGGTAAACTTTGCAGAAAGGGGCTCTTTAAGGACTGTTGCGACAGCGATCCCGTAAGCTA
GCGATGGTGGTGTAGGAAGTGCATGGGCGTCGACATAGCTGGAACCAATAAATCGTCGTCCTCCTTTTTGTGCTCTCCTG
TGTTGGCCTATTTGGGATTCTATGTCCAATTTCTTTTTTCTCTGCATGAGAGTTGGCTGTAGTTCGTCAATTACTGGTCG
ACGATGCTCGTGGTCATGTTACC-AAGGATATGATGTAGGGAGTAGTTGTTTATGCTTTTGTGTTCTGTTTGGGTGGCTT
ATACCTAGTCCGTACGCTGGTGTGTGTGCATGTGTATACTGGAATGATTTCAGCAACGATATTGGGCATGTAAGCTACTT
TTGTTGG--A-AAAAAGGGCAACTACATGGCAAACATGACAGATGT---------TAAGATTTTACTCAAGAGAAAGTTG
TGCAAATTCTTATTTTGGGGGAAATTTCACTCAAATGTGTGTAAGCTTGGAAACAAAATTGAATATCCGAAGGAAGATAT
CAATAATTATTACACAAAGGATGACCGGACACAGGTCAATTTGAGCACACTACACAGT--AAAATAAACTATTTTTTGAT
GCTCCGTGCAATGCACGGGCATCTTACTAGTTATTCAATAAAGTTTGTCCGGTTTGCCAAAAAAGAAAAAAGACCGAGTG
TGAGTTTGTATACCTTACAAGCCCTAAAACATTTATCCAAGAAACAGAAAAAGAAAGTGGAAAATCCTAGATCTTGCAAC
TGCGGCGGCGGGGGCGGCGTCGAGGAAAGAAGAGGAGGGAGCGCGCTGCTTTTGGAGATGGAGGTGGCAGGAGAAGCCAA
AGAGAGGGCCGGCGGAGAATCCGCGGAGCGCCGCCGCAAGGAGGCCAAATCCTCT---------------------TCTG
GGATCTACGACGATTCAGCCACGTCGGAGCAGATCGCGGGGAACGAAGACGACAACTCAATGGATCATTACGGGGAGCTG
TTCCTGCCCGAGTACTTGACGGACGAGGAGATTATTCAAGAGTACCGTATAGGCTGGGAATGCCGGTGCTATGGCATGTT
CGGCGGCTTCAAAGATGAGAGTACGTAAACAATATACGCACTTTTACCTGAGTTATATA--ATTCGCATAATCACTTGCA
GCCAGTATAATTTTTCTTTCTCTTTGCAATCATCGAAATCGTAACTGAAGAATTTT--TTCCGTTTCTGTGTATTATTAT
TATGTTTCTTGCTGAGAGACCTTAT--GCTGTACTATAACACACGCTTTGTG---TATGCAGCGACGATCAAGAGCATGC
TGACCACATACAAAACCATCCCACATGCTTTGGTCTCCCACACCTTGCAAGTCTACTCCATCAAAGTCGAGAAGCCGAAA
CTCGGGTGGCCACTTCGTGTCTATGGCATGGTTGCTGCCCGAGACCATGTGGATTATAATCGCAACTTTCTCTTCAATCG
CACAAGCGATAACTGCCAAATCATTACTGCAGATGTATACATTCCTCTTCCCTGCTTGTGGTGGGTTCATTGGCTTTGCC
ATATAAATTGTTGCTTATACTATGGTTGCCAATTGC----AGGAGCCCTACTTGACGCTGACTGGCCCCTCTGGCGCAAT
TCTGTCCCTTGAACCTGTTGACTTTGAAGTTGATCTTAAGTTTAAGAGAGGGTCTGGAGATGGAAAAGCATTGATCAACC
AAGTCCTCCGATACCAACGGAGCCCCGGTCCTTTCGGTACAATCTTGGACAACAACCTTTGCACCATAAGATTGCATTGT
AAGCAGCTTGGGGAAGCAGCCGAGGCCACCATCCTGAGTGTGCAAATTAT----GGGTCATGGCCTGGTCGATCTGCAGG
GAAAGTTTTTTGCCACGGTGTGGCCTTCCCCCTTGAAGAATTTGTGTTGCTTGCTTTTCCAGACGGAGATAATCCGCCGA
TGGATCAAGATGGTAACATTCGTCTGTCAAGGCGTGTTGTTTCTGTAGATGTGAACCAAAACTTCCAAGTTTCTGTACAG
GCCTACTCTGCATGTGGT---AGCTTGAAAGTACCCATTGCAATAGGTGATGCTGTGTTCGAATCCAAAAAGGACAGCGG
CGTAACAGAGAAAGAATGTGACATTGGTGCTAGCTGCAGGGTCAAGATTAAAGTGGCTTGGTCTCTCCTTATTTGGTCGA
AGCGTCTACTCCAGGGTTAACATTAAA-----------------------------------------------------
--GTGG--------------------------------------CTTGGGCTACTCCATTCAGAAATATCCTTCCTTCCT
TGCTCTAATGAAACCAAATGTGTCATATGTTCTTGCTGGCTGGAAGAAGAATATGCAGTCTTTCCTATG-GTCTATTAAC
TAGTTCAGCTATCTGTAGTGTCATGAGCTGGTTGTTATGGGAGATGATCTTGGACCCGGAAGTCGTGTCTTGTGAAACTA
ATTTAAATTGTGTCATGTGAGATGTTACGGCTACTTCTGTATGGATGTCATGTGTGCAAAATATCAGTTATTTATGTA--
TTCCCTCTGTACCATCATATAAGAACCATTTTGACACTACATTAATATAAAAAACGTTTTTATATTATGGAACAGAGGAA
GTATCTATTGATTAGTAGTGTCCGTTCTCGTGCTGTTTTTACCCCTGAGCACCAGTTAATTAATTTTGATAGAATGATGA
TGTGCTAGTTACTGGACGCCGCTACGCCTCAATTGTTTGATGTGGTAAGCCAGGCCTACAGCAACTATGTCGCATGATTC
ATATGATTGTAATTGTAATGAGCAGGTGATTTCGTCAACTCAGCATGGTTCGTACAATTGTAATTGTAGCGAGCAGGTTA
TTTCATGAATGCGTCAATTTCATGATAGATTCTTTGTGTGTTTCATTGTCAGTAATTTTTTTTAGAAAAAGAGGATGACC
CCCGGCCTCTGCATCTGGACGATGCATACGGTCACTTTATTAATTATTCTCACAAGACCTTATAAAGTCATACAACAGTA
AGACTGAAGCCACCGTCTAAGCAAAAACTGTCGCTACACCTATCCAATTGATGATGGAGCGCTGATAGTCTGGGCCTAAT
ACCAAACAGACACCGCAGCCAAACCTAAACGTCTAAGACCCGAGGTCCCAACCAGGACGCCTGCCTGGTATGGGGCACCT
ACCAATCCAGCGCACTCCTCAACCAGGACGTCTGTCGGGTATGGGGCCGCCGTAGCTACCTGCCACGAGTCCATCT
>chr3D_1
TGTTTTGGTTCAG-TTTTTTCACCATTTCTACTCAAGGTGGCGAAGGGTTTCCTTGTGATCGGCGCGGCACCAATCTTCT
GGGTGTTATGGAAGACCAAGAATAAATCCTTCTTTAAATGTGTTCGTCCTGGAGATCCAACCACTGTATTTTTT-TATGT
TTGTCAGTTCTTAACATCTTGGGCAACCTTTGCAGAAAGGGGCTCTTTAAGGACTGTTGTGACAGCGATCCCGTAAGCTG
GCGATGGTGGTGTAGGAAGTGTATGGGCGTCGACATAGCTGGAACCAATAAATTGTCGTCCTCCTTTTTGTGCTTTCCTG
TGTTAGCCTATTTGGGATTCTATGACCAATTTCTTTTTTCTCTGTATGAGAGTTGGCTGTAGTTCGTCAATTACTGGTCG
ACGATGCTGATGCTCATGTTA-CCAAGGATATGACGTAAGGAGTAGTTGTTTATGCCTTTGTGTTCTGTTTGGGTGGCTT
ATACCTGGCCCGTACGCTGGTGTGTGTGCATGTGTATACTGGAATGATTTCAGCAACGATATTGGGCATGTAAGCTACTT
TTCTTGG--A-AAAAAGTGCAACTACATGGCAAACATGACAGATGTTAAGATGTTTAAGATTTTACTGAAGTGAAAGCTG
AGCAAATTCTTATTTTGGGGGAAATTTCACTCAAATGCGTGTAAGCTTGGGAACAAAATTGAATATCTGAAGAAAGATAT
CGATATTTATTACGCAAAATATGACCCGACACAGGTCAATTTGAGCACACAACATAGT--AAAATAAACTATTTTTTGAT
GTTCCGTGCAACGCACGGGTATCTTACTAGT-------------------------------------------------
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>chr6D_1
TGTTTTGGTTCAG-TTTTTTCATCATTTCTACTCAAGGTGGCGAAGGGTTTCCTTGTGATCGGCGCGGCACCAATCTTCT
GGGTGTTATGGAAGACCAAGAATAAATCCTGCTTTAAATGTGTTCGTCCTGGAGATCCAACCACTGTAGTTTTT-TATGT
TTGTCAGTTCTTAACATCTTGGGCAACCTTTGCAGAAAGGGGCTCTTTAAGGACTGTTGCGACAGCGATCCGGTAAGCTG
GCGATGGTGGTGTAGGAAGTGTATGGGCGTCGACATAGCTGGAACCAATAAATTGTCGTCCTCCTTTTTGTGCCCTCCTG
TGTTAGCCTATTTGGGATTCTATGTCCAATTTCTTTTTTCTCTGTATGAGAGTTGGCTGTAGTTCGTCAATTACTGGTCG
ACGATGCTGATGCTCATGTTA-C-AAGGATATGATGTAAGGAGTAGTTGTTTATGCTTTTGTGTTCTGTTTGGGTGGCTT
ATACCTGGCCCGTACGCTGGTGTGTGTGCATGTGTATACTGGAATGATTTCAGCAACGATATTGGGCATGTAAGCTACTT
TTCTTGGAAA-AAAAAGTGCAACTACATGGCAAACATGACAGATGT---------GAAGATTTTACTGAAGAGAAAGTTG
TGCAAATTCTTATTTTGGGGGAAATTTCACTCAAATGCGTGTAAGCTTGGGAACAAAATTGAATATCCGAAGAAAGATAT
CGATATTTATTACACAAAGGATGACCCGACACATGTCAATTTGAGCACACTACATAGT--AAAATAAACTATTTTTTGAT
GTTCCGTGCAACGCACGGGCATCTTACTAGT-------------------------------------------------
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>chr2D_1
TGTTTTGGTTCAGTTTTTTTCATCATTTCTACTCAAGGTGGCGAAGGGTTTCCTTGTGATCGGCGCGGCACCAATCTTCT
GGGTGTTCTGGAAGACCAAGAATAAATCCTGCTTTAAATGTGTTCGTCCTGGATATCCAACCACTGTAGTTTTT-TATGT
TTGTCAGTTCTTAACATCTTGGGCAACCTTTGCAGAAAGGGGCTCTTTAAGGACTGTTGCGACAGCGATCCGGTACGCTG
GCGATGGTGGTGTAGGAAATGTATGGGCGTCGACATAGCTGGAACCAATCAATTGTCGTCCTCCTTTTT-TGCTCTCCTG
TGTTAGCCTATTTGGGATTCTATGTCCAATTTCTTTTTTCTCTATATGAGAGTTGGCTGTAGTTCGTCAATTACTGGTCG
ACGATGCTGATGCTCATGGTA-C-AAGGATATGATGTAAGGAGTAGTTGTTTATGCTTTTGTGTTATGTTTGGGTGGCTT
ATACCTGGCCCGTACGCTGGTGTGTGTGCATGTGTATACTGGAATGATTTCAGCAACGATATTGGGCATGCAAGCTACTT
TTCTTGGAAA-AAA--GTGCAAGTACATGGCAAACATGACAGATGT---------TAAGATTTTACTGAAGAGAAAGTTG
TGCAAATTTTTATTTTGGGGGAAATTTCACTCAAATGCGTGTAAGCTTGGGAACAAAATTGAATATCCGAAGCAAGATAT
CGATGTTTATTACACAAAGGATGACCAGACACAGGTCAATTTGAGCACACTACATAGT--AAAATAAACTATTTTTTGAT
GTTCCATGCAACGCACGGACATCTTACTAATTTTT---------------------------------------------
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>chr5A_1
TGTTTTGGTTCAA-TTTTTTCATCATTTCTACTCAAGGTGGCGAAGGGTTTCCTTGTGATCAGCGCGGCACCAATCTTCT
GGGTGTTATGGAAGACCAAGAATAAATCCTGCTTTAAATGTGTTCGTCCTGGAGATCCAACCACTGTAGTTTTTTTATGT
TTGTCAGTTCTTAGCATCTTGGGCAACCTTTGCAGAAAGGGGCTCTTTAAGGACTGTTGCGACAGCGATCCGGTA-----
------------------------------------AGCTGGAACCAATAAACTGTCGTCCTCCTTTTTGTGCCCTCCTG
TGTTAGCCTATTTGGGATTCTATGTCCAATTTCTTTTTTCTCTGTATGAGAGTTGGCTGTAGTTCGTCAATTACTGGTCG
ACGATGCTGATGCTCATGTTA-C-AAGGATATGATGTAAGGAGTAGTTGTTTATGCTTTTGTGTTCTGTTTGGGTGGCTT
ATACCTGGCTCGTACACTGGTGTGTGTGCATGTGTATACTGGAATGATTTCAGCAACGATATTGGGCATGTAAGCTACTT
TTCTTGGAAA-AAAA-GTGCAGCTACATGGCAAACATGACAGATGT---------GAAGATTTTACTGAAGAGAAAGTTG
TGCAAATTCTTATTTTGGGGGAAATTTCACTCAAATGCGTGTAAGCTTGGGAACAAAATTGAATATCCGAAGAAAGATAT
CGATATTTATTACACAAAGGATGACCCGACACAGGTCAATTTGAGCACACTACATAGT--AAAATAAACTATTTTTTGAT
GTTCCGTGCAACGCACGGGCATCTTACTAGT-------------------------------------------------
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>chr7B_3
--TTTTGGTTCAG-TTTTTTCATCATTTCTACTCAAGGTGGTGAAGGGTTTCCTTGTGATCGGCGCGGCACCAATCTTCT
GGGTGTTATGGAAGACCAAGAATAAATCCTGCTTTAAATGTGTTCGTCCTAGAGATCCAACCACTGTAGTTTTT-TATGT
TTGTCAGTTCTTAACATCTTGGACAACCTTTGCAGAAGGGGGCTTTTAG-GGACTGTTGCGACAACGATCCAGTAAGCTG
GCGATGGTGGTGTAGGAAGTGTATGGGTGTCGACATAGCTGGAACCGATAGATTGTTGTCCTCCTTTTTGTGCCCTCCGG
TGTTAGCCCATTTGGGATTCTATGTCCAATTTCTTTTTTCTCTGTATGAGAGTTGGCTGTAGTTCGTCAATTACTGGTCG
ACGATGCTGATGCTCATGTTA-C-AAGAATATGTTGTAAGGAGTAGTTGTTTATGCTTTTGTGTTCTGTTTGGGTGGTTT
ATACCTGGCCCGTACGCTGGTGTGTGTGCATGTGTATACTGGAATGATTTCAGCAACGATATTGCGCATGTAAGCTACAT
TTGTTGGAAAAAAAA-GTGCAACTACATGGAAAACATGACATATGT---------GAAGATTTTACTGAAGAGAAAGTTG
TGCAAATTCTTATTTTGGGGGAAATTTCACTCAAATGCGTGTAAGCTTGGGAACAAAATAGAATATCCGAAGAAAGATAT
CGATATTTATTACATAAAGGATGACCTGACACAGGTCAATTTGAGCACACTACATAGTAAAAAATAAACTATTTTTTGAT
GTTCCATGCAACGCACGGGCATCTTACTAGTT------------------------------------------------
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>chr4A_146
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------------------------------------------------------------------TAGTTTTTTTATGT
TTGTCAGTTCTTAGCATCTTGGGCAACCTTTGCAGAAAGGGGCTCTTTAAGAACTGTTGCGACAGCGATCCGGTAAGCTG
GCGATGGTGGTGTAGGAAGTGTATGGGCGTCGACATAGCTGGAACCAATAAACTGTCGTCCTCCTTTTTGTGCCCTCCTG
TGTTAGCCTATTTGGGATTCTATGTCCAATTTCTTTTTTCTCTGTATGAGAGTTGGCTGTAGTTCGTCAATTACTGGTCG
ACGATGCTGATGCTCATGTTA-C-AAGGATATGATGTAAGGAGTAGTTGTTTATGCTTTTGTGTTCTGTTTGGGTGGCTT
ATACCTGGCTCGTACGCTGGTGTGTGTGCATGTGTATACTGGAATGATTTCAGCAACGATATTGGGCATGTAAGCTACTT
TTCTTGGAA-AAAAA-GTGCAACTACATGGCAAACATGACAGATGT---------GAAGACTTTACTGAAGAGAAAGTTG
TGCAAATTCTTATTTTGGGGGAATTTTCACTCAAATGCGTGTAAGCTTGAGAACAAAATTGAATATCCGAAGAAAGATAT
CGATATTTATTACACAAAGGATGACCCGACACAGGTCAATTTGAGCACACTACATAGT--AAAATAAACTATTTTTTGAT
GTTCCATGCAATGCACGGGCATCTTACTAGT-------------------------------------------------
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>chr3A_888
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------------------------TAAAACATTTATATCCAAG-----AAAAGAAAAAGGAAAACCCTAGATCTCGCAAC
TGCGGCTGCGGGG-CGGCGTCAAGGAAAGAAGGAGAGGGAGAACACTGCTTTTGGAGATGGAGGTGATAGGAGAAGCCAA
AGAGGGTAGCGGCGGAGAATCCGCGGAGTGCTACCGTAAGGAGGCCAAATCCTCCTCTGGGATCGAAGGACAACAATCTG
GGATCGAAGACGGTTCAGCCACGCCGGAGCAGATCTCGGAGAACGAAGACGACAACTCAAC------GGATGGGGAGCTG
TTCCTGCCCGAGTACTTAACGGATGAGGAGATCATGCAAGAGTACCGTATAGGCTGGGAATGCAGGTGCTATGGCAAGTT
CGGTAACTTCGAAGATGAGAGTAAGTAAACAATATACGCACTTATATGAGT------TA--ATTCGCATAATAACTTGCA
GCAAGCATAATTTT-CTTCCTATTCGTAATCATCGAAATCTGAATCAAAGAAAATT--TTCGGTTTCTGTG---TATTAT
TATGTTTCTTGCTGACAGACCTTATATGTTG-----CAACACACTCTTTGTGTCCTATGCAGCGACGATCAAGAACATGC
TGACCACATACAAAACCATCCCACATGCTTTGGTCTCCCGCAACTTGCAAGTCTACTCCATCGAAGTCGAGAAGCCGAAA
CTCGGGTGACCACTTCGTGTCTATGGCATGGTTGCTGCCCGAGACCATGTGGATTATAATCGCAACTTTCTCTTCAATCG
CACGAGCGATAACTGCCAAATCATTACTGCAGATGTATACATTCCTCTTCCCTGCTTGAGGTGGGTTTATTGGCTTTGCC
ATATAAATTGTTACTTATACTATGGTTGTCAATTGC----AGGAGCCCTACTTGACGCCGACTGGCCCCTCTCGTGCAAT
TCTGTCCCTTGAACCTGTGGACTTTGAAGTTGATCTTAAGTTCAAGAGAGAGTTTAAAGATGGAAAAGCATTGATCAACC
AAGTCCTCCGATACCAACGGAGCCCTGGTCCTTTTGGTACAATCTTGGACAACAACCTTTGCACCATAAGATTTCATTGT
AAGCAGCTTGGGGAAGCGGTCGAGGCCACTATCCTGAGTGTGCAAATTATTCATGGGTCATGGCCTAGTCAATTTGCAGG
GAATTTTTTTAGCAAAGGTGCCTCT---CCCCTTGAAGAATTTGTGTTGCTTGATTTTTCAGATGGAGATAATCCGCCGG
TGGATCAAGATGGTAACATTCATCTGTCAAGGCGTGTTGTTTCTGTAGATGTGAACCAAGACTTCAAAGTTTCTGTACAG
GCCTACTCTGCATGTGGTGGTAGCTTGAAAATACCCATTGCAACAGGTGATGCTGTGTTCGAACCCAAAAAAGACGGCGG
CGTAACAGAGAAAGAATGTGACATTGGTGCTAGCTGCAGGGTCAAGATTAAAGTGGCTTGGTCTCTACTTATTTGGTCCA
AGCTTCTACTCCAGGGTTAACATTAAAGTGGCCTGGTCTCTACTTATTTGGTCCAAGCTTCTACTCCAGGGTTAACATTA
AAGTGG--------------------------------------CTTGGTCTACTCCATTCAGAAATATCCTTCCTTCCT
TCCTCTAATGAAACCAAAGGTGTCATATGTTCTGGCTGGCTGGAAGAAGAATATGCAGTCTTTCCTGTG-GTCTATTAAC
TTGTTCAGCTATCTGTAATGCCATGAGCTGGTTGTTATGCGAGATTATCTTGGACCCCGAAGTCATGTCTTGTGAAACTA
ATTTAAATTGTGTCATGTGAGATGCCCCGGCTATTTCTGTATGAATGTCAGC----------------TATTTATGTATG
TTCCCTCTGTCCCATCATATAAGAACCTTTTTGACACTAAC-TAGTATAAAAAACGTTCTTATATTATGGGACGGAGGGA
GTATCTACTGATTAGTAGTGTACGTTCTCGTGCTGTTTTTACCCCTGAGCACCAGTTAATTAGTTTTGATAGCATGATGA
TGTGCTAGTTACTGGACGCAGCTACGCCTCAATTGTTTGATGTGGTAAGCCAGGCCTACAGCAAGTGTGTCGCATGATTC
ATATGATTGTAATTGTAGTGAGCAGGTGATTTCGTCAATTCAGCATGGTTCGTACAATTGTAATTGTAACGAGCAGGTGA
TTTCGTGAATGCGTCAATTTCATGATAGATTCTTTGTG------------------------------------------
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>chr3A_924
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------------------------------------------------------------AAAACCCTAGATCTTGCAAC
TGCGGCGGCGGGGGCAGCGTCGAAGAAAGAAGAAGAGGGAGAACTCTACTTTTGGAGATGGAGGTGATAAGAGAAGCGGA
AGGGGGGAGCGGTGGAGAATCCACGAAGCGCCACCATAAGGAGGCCACATCCTCT---------------------TCTA
GGATCAACGACGATTCAGCGACGCCGGAGCAGATCTCGGAGAACGAGGATGACAACTCAATGGATCTAGATGAGGAGGTG
TTCCTGCCCGAGTACATGACGGATGAGGAGATTATGCAAGAGTACCATATAGGCTGGGAGTGCATGTCCTATGGAAAGTT
CGGTAACTTCGAATATGAGAGTACTTAAACAATGTACACACTTATCTGAGT------TATAATTCGCATAATTACCTACA
GCCAGCATAATTCT-CTTCCTCTTCGCAGTCATCGAAATCGTAACCGAAGAAAATT--TTCGGTTTCTGTG---TATTAT
TATGTTTCTTGCTGAGAGACATTAT--GTTG-----TAACACACGCTTTGTG---TATGCAGCGACGATCAAGAACATGC
TGACCACATACAAAACCATCCCACATGCTTTGGTCTCCTACACCTTGCAAGTCTACTCCATCCAAGTCGAGAAGCCAAAA
CTCGGGTGGCCACTTCGTGTCTATGGCATGGTTGCTGCCCGAGACCATGTGGATTATAATCGCAACTTTCTCTTCAATCG
CACAAGCAATAACTGCCAAATCATTACTGCAGATGTATACATTCCTCTTCCCTGCTTGTGGTGGGTTTATTGGCTTTGCC
ATATAAATTGTTACTTATCCCATGATTGCCAATTGC----AGGAGCCCTACTTGACGCTGACTGGCCCCTCTCGTGCAAT
TCTGTCCCTTGAACCTGTTGACTTTGAAGTTGATCTTAAGTTCAAGAGAGAGTCTGGAGATGGAAAAGCATTGATCAACC
AAGTCCTCCGATGCCGACGGAGCCCTGGTCCTTTTCGTACAATCTTGGAAAACAACCTTTGCACCATAAGATTTCATTGT
AAGCAGTTTGCGAAAATGGTCGAGGCCACTATCCTAAGTGTGCAAATTATTCATGGGTCATGGCCTAGTCAATTTGCAGG
GAAAGTTTTTATCCAAGGTGCATCT---TCCCTTGAAGAATTTGTGTTGCTTGATTTTCTAGATGGAGATAATCCGCCGC
TGGATCAAGATGGCAACATTCATCTGTCAAGGTGTGTTGTTTCTGTAGATGTGAACCAAAACTTCCAAGTTTTAGTACAA
GCCTACTCTGCATGTGGTTGTAGCTTGAAAGTACCCGTTGCAACAGGTGATGTCATGTTCGAACCCAAAAAATATGGCGG
CGTAACAGAGAAAGAATGTGACATTGGTGCTAGCTGCAGGGTCAAGATTAAAGTGGCTTGGTCTCTACTTATTTGGTCCA
AGCTTGTACTCCAGGGTTAACATTGAAGTGGCTTGGTCTACTCCATTTAGAAATATCCTTCCTTCCTTGCTCTAGAAACA
AAAGGTGTCATATGTTCTTGCTGGCTGGAAGAAGAATATGCAGTCTTGGTCTACTCCATTCAGAAATATCCTTCCTTCCT
TGCTCTA--GAAACCAAAGGTGTCATATGTTCTTGCTGGCTGGAAGAAGAATATGCAGTCTTTCCT--------------
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>chr3A_924
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------------------------------------------------------------AAAACCCTAGATCTTGCAAC
TGCGGCGGCGGGGGCGGCGTCGAAGAAAGAAGAAGAGGGAGAACTCTGCTTTTGGAGATGGAGGTGATAAGAGAAGCGGA
AGGGGGGAGCGGTGGAGAATCCGCGAAGCGTCGCCGTAAGGAGGCCACATCCTCT---------------------TCTA
GGATCGACGACGATTCATCGACGCCGGAGCACATCTCGGAGAATGAGGATGACAACTCAATGGATCTGGATGAGGAGGTG
TCCCTGCCCGATTACATGATGGATGAGGAGATTATGCAAGAGTACCATATAGGCTGGGAGTGCATGTCCTATGGCAAGTT
CGGTAACTTCGAATATGAGAGTACGTAAACAATGTACGCACTTATCTGAGT------TATAATTCGCATAATTACCTACA
GCCAGCATAATTCT-CTTCCTCTTCGCAGTCATCGAAATCGGAATCGGAGAAAATT--TTCGGTTTCTGTG---TATTAT
TATGTTTCTTGTTGAGAGACATTAT--GTTG-----TAACACACGCTTTGTG---TATGTAGCGACGACCAAGAACATGC
TGACCACATACAAAACCATCCCACATGCTTTGGTCTCCTGCACCTTGCAAGTCTACTCCATCCAAGTCAAGAAGCCAAAA
CTCGGGTGGCCACTTCGTGTCTATGGCATGGTTGCTGCCCGAGACCATGTGGATTATAATCGCAACTTTCTCTTCAATAG
CACAAGCGATAACTACCAAATCATTACTGCAGATGTATACATTCCTCTTCCCTGCTTGTGGTGGGTTTATTGGCTTTGCC
ATATAAATTGTTACTTATCCCATGATTGCCAATTGC----AGGAGCCCTACTTGACATTGACTGGCCCCTCTCGTGCAAT
TTTGTCCCTTGAACCTGTTGACTTTGAAGTTGATCTTAAGTTCAAGAGAGAGTCTGGAGATGGAAAAGAATTGATCAACC
AAGTCCTCCGATGCCGACGGAGCCCTGGTCCTTTTGGTACAATCTTGGACAACAACCTTTGCACTATAAGATTTCATTGT
AAGCAGTTTGCGGAAACGGTCGAGGCCACTATCCTAAGTGTGCAAATTATTCATGGGTCATGGCCTAGTCAATTTGCAGG
GAAAGTTTTTATCCAAGGTGCCTCT---TCCCTTGAAGAATTTGTGTTGCTTGATTTTCCAGATGGAGATAATCCGCCGG
TGGATCAAGATGGAAACATTCATCTGTCAAGGCGTGTTGTTTCTGTAGATGTGAACCAAAACTTCCAAGTTTTAGTACAT
GCCTACTCTGCATGTGGTGGTAGCTTGAAAGTACTCGTTGCAACAGGTGATGTCGTGTTCGAACCCAAAAAAGACGGCGG
CGTAACAGAGAAAGAATGTGACATTGGTGCTAGCTGCAGGGTCAAGATTAAAGTGGCTTGGTCTCTACTTATTTGGTCCA
AGCTTGTACTCCAGGGTTAACATTGAAGTGGCTTGGTCTACTCCATTCAGAAATATCCTTCCTTCCTTGCTCTAGAAACC
AAAGGTGTCATATGTTCTTGCTGGCTGGAAGAAGAATATGCAGTCTTGGTCTACTCCATTCAAAGATATCCTTCCTTCCT
TGCTCTA--GAAACCAAAGGTGTCATATGTTCTTGCTGGCTGGAAGAAGAATATGCAGTCTTTCCTAGGT----------
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>chr3D_1214
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---------------------------------------------------GGCTGGGAGTGCATGTCCTATGGCAAGTT
TGGTAACTTCGAAGATAAGAGTAAGTAAACAATATACGCACTTATATGAG--------ATAATTCGCATAATAACTTGCA
GCAAGCATAATTTT-CTTCCTATTCGTAATCATCGAAATCGGAACCGAAGAAAAAAAGTTCGGTTTCTGTG---TATTAC
TATGTTTCTTGCTGAGAGACCTTAT--GTTG-----TAACACACGCTTTGTG---TATGCAGCGACGATCAAGAACATGC
TAACCACATACAAAACCATCCCACATGCTTCGGTCTCCCACACCTTGCAAGTCTACTCCATCCAAGTCGAGAAGCCGAAA
CTCGGGTGGCCACTTCGTGTCTATGGCATGGTTGCTGCCCGAGACCATGTGGATTATAATCGCAACTTTCTCTTCAATCG
CACGAGCGATGACTGCCAAATCATTACTGCAGATGTATGCATTCCTCTTCCCTGCTTGTGGTGGGTTTATTGGCTTTGCC
GTATAAATTGTTACTTATACTATGATTGCCAATTGCATGCAGGAGCCCTACTTGACGCTGACTGGCCCCTCTCGTGCAAT
CCTGTCCCTTGAACCTGTTGACTTTGAAGTTGATCTTAAGTTCAAGAGAGAGTCTGAAGATGGAAAAGCATTGATCAACC
AAGTCCTCCGATACCAACGGAGCCCTGGTCCTTTCGGTACAATCTTGGACAACAACCTTTGCACCATAAGATTTCATTGT
AAGCAGTTTGGGGAAACGGTCGAGGCCACTATCCTGAGTGTGCAAATTATTCATGGGTCATGGCCTAGTCAATTCGCAGG
GAAAGTTTTTAGCAAAGGTGCCTCT---CCCCTTGAAGAATTTCTGTTGCTTGATTTTCCAGATGGAGATAGCCCGCCGG
TGGATCGAGATGGAAACATTCATCTGTCAAGGCGTGTTGTTTCTGTAGATGTGAACCAAAACTTCCAAGTTTCTGTACAG
GCCTACTCTGCATGTGGT---AGCTTGAAAGTGCCCATTGCAACAGGTGATGCTGTGTTCGAACCCAAAAAAGACGGCGG
CGTAACAGAGAAAGAATGTGACATTGGTGCTAGCTGCAGGGTCAAGATTAAAGTAGCTTGGTCTCTACTTATTTGGTCCA
AGCTTCTACTCCAGGGTTAACATTAAAGTGGCTTGGTCTACTCCATTCAGAAATATCCTTCCTTCCTTGCTCTA------
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-------ATGGAACCAAAGGTGTCATATGTTCTTGCTGGCTGGAAGA---ATATGCAGTCTTTCCGCGTAGTCTATTAAC
TACTTCAGTTATCTGTAGTGTCATGAGCTGGTTGTTATGCAAGATTATCTTGGACTCCTAGGTCATGTCTTATGAAG-TA
ATTTAAATTGTGTCATGTGAGATTTCCCGGCTACTTCTGTATGGATGCCATGTATGCAAAATGTCAGCTA----------
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----------------------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-----------------------S--S----------------------------------------------------S
---------------------S-------------------------------S--------------------------
----S---------------------------------------S-----------------------------------
--------SS--S--------S----------------S-----------------------------------------
------S-S-----------------------------------------------------------------------
-----------------S-------------------------------------------------S------------
-------------------------------------S------------S---------------------S-------
-S---S--------------------S---------------------------S-------------------------
-S------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS------------SSSSS-SSSSSS--------SS------S---------------
---------------------------------S-------SS-S---------------------SS------------
----S--SS---------------------------S-------------------------------------------
-----S-----------------S-----------S---S--------------------------SSS-S---------
-----------------------S-----------S---------------------------S------------S---
---SSS----S--------------------------------S--SSS-SSSSSSS---------------S-------
-----S--------S---S-----S--------------------S------SS-------S---------SSS------
----------------------------S--SSSSS--------------------------------------S-----
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------S-----------------------------------------------------------S-S-----
------------------------------------------S-------S-----------------------------
-------------------------S-----------------------------------------------S------
-----------------S-S---------S------------------------------------S---S--S------
----------S----S----SSS-SSSS-------------------------S---------S---------------S
---------------------S----------------------------------------------------------
-------------------------------------------S-------------------S-------S---S----
------------------------------------------------------------------S-----------S-
---S----------------------------------------------------------------------------
-------------------------------------------------S------------------------------
------------------S-------------------------------------------------------------
---------------------------------------S-----S-----------S------S---------------
-------------------------SS--------------------------S--------S----S------------
----------S----------------S-----------SSS--S-------------S-----------S--S----S-
-------S-------------S----------------------------------------S---------S-------
-------------------S--------------------------------------------S-S-------------
-----------------S--------------------S-----------------------------S---------S-
----S---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_410
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----------------------------------------------------------------------TTACTGGTCG
ACGATGCTCG----------------------------------------------------------------------
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>reverse_1994
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GCATTGT
AAGCAGCTTGGGG-------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_1003
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------GGAAAGAAGAGGAGGGAGCG-------------------------------------
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----------------------------------------------------------------------------
>reverse_2686
--------------------------------------------------------------------------------
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---------------------------------------------GATCTTGGACCCGGAAGTCG---------------
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----------------------------------------------------------------------------
