Multiple sequence alignment - TraesCS3B01G076200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G076200 chr3B 100.000 3140 0 0 1 3140 47120348 47123487 0.000000e+00 5799.0
1 TraesCS3B01G076200 chr3B 94.938 1699 71 5 768 2462 46366172 46364485 0.000000e+00 2647.0
2 TraesCS3B01G076200 chr3B 95.192 624 7 3 2518 3140 46364211 46363610 0.000000e+00 965.0
3 TraesCS3B01G076200 chr3B 77.660 846 163 18 1308 2134 47202136 47202974 2.810000e-135 492.0
4 TraesCS3B01G076200 chr3B 76.543 972 176 30 1323 2257 47193040 47193996 4.710000e-133 484.0
5 TraesCS3B01G076200 chr3B 79.091 330 51 9 2546 2858 47195406 47195734 8.820000e-51 211.0
6 TraesCS3B01G076200 chr3B 90.826 109 10 0 341 449 46366635 46366527 2.520000e-31 147.0
7 TraesCS3B01G076200 chr3B 78.808 151 31 1 2669 2819 46307800 46307949 1.990000e-17 100.0
8 TraesCS3B01G076200 chr3B 100.000 28 0 0 3080 3107 79132281 79132254 6.000000e-03 52.8
9 TraesCS3B01G076200 chr3A 93.756 2146 100 16 850 2983 37823990 37821867 0.000000e+00 3190.0
10 TraesCS3B01G076200 chr3A 95.000 160 8 0 2981 3140 37821744 37821585 5.200000e-63 252.0
11 TraesCS3B01G076200 chr3A 84.076 157 23 2 1040 1195 10940608 10940763 1.950000e-32 150.0
12 TraesCS3B01G076200 chr3A 80.247 162 27 5 1459 1619 10613087 10613244 1.980000e-22 117.0
13 TraesCS3B01G076200 chr3D 88.976 1524 129 13 850 2344 27948418 27949931 0.000000e+00 1847.0
14 TraesCS3B01G076200 chr3D 91.315 783 26 11 2377 3140 27949926 27950685 0.000000e+00 1031.0
15 TraesCS3B01G076200 chr3D 76.464 837 152 25 1451 2255 27681531 27680708 2.250000e-111 412.0
16 TraesCS3B01G076200 chr3D 81.457 151 22 4 2669 2818 4924771 4924626 5.500000e-23 119.0
17 TraesCS3B01G076200 chrUn 79.039 229 44 4 1052 1278 225561566 225561340 1.510000e-33 154.0
18 TraesCS3B01G076200 chrUn 78.571 238 47 4 1040 1275 237462792 237463027 1.510000e-33 154.0
19 TraesCS3B01G076200 chrUn 78.571 238 47 4 1040 1275 257674508 257674743 1.510000e-33 154.0
20 TraesCS3B01G076200 chrUn 78.571 238 47 4 1040 1275 279684649 279684884 1.510000e-33 154.0
21 TraesCS3B01G076200 chrUn 79.039 229 44 4 1052 1278 294339206 294338980 1.510000e-33 154.0
22 TraesCS3B01G076200 chr5A 77.574 272 35 8 520 768 483540366 483540098 1.170000e-29 141.0
23 TraesCS3B01G076200 chr4D 77.253 233 32 9 551 768 502490329 502490103 1.980000e-22 117.0
24 TraesCS3B01G076200 chr4D 87.879 66 5 2 2271 2334 218516255 218516191 1.210000e-09 75.0
25 TraesCS3B01G076200 chr5B 91.667 60 3 1 2271 2328 540361809 540361750 7.220000e-12 82.4
26 TraesCS3B01G076200 chr5B 90.164 61 4 1 2270 2328 559771434 559771494 9.340000e-11 78.7
27 TraesCS3B01G076200 chr6B 91.525 59 3 1 2270 2326 226867899 226867957 2.600000e-11 80.5
28 TraesCS3B01G076200 chr7D 86.111 72 8 2 2270 2339 443416090 443416019 3.360000e-10 76.8
29 TraesCS3B01G076200 chr1D 88.889 63 5 1 2271 2331 337065245 337065183 3.360000e-10 76.8
30 TraesCS3B01G076200 chr7B 100.000 29 0 0 511 539 435116298 435116270 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G076200 chr3B 47120348 47123487 3139 False 5799.0 5799 100.0000 1 3140 1 chr3B.!!$F2 3139
1 TraesCS3B01G076200 chr3B 46363610 46366635 3025 True 1253.0 2647 93.6520 341 3140 3 chr3B.!!$R2 2799
2 TraesCS3B01G076200 chr3B 47202136 47202974 838 False 492.0 492 77.6600 1308 2134 1 chr3B.!!$F3 826
3 TraesCS3B01G076200 chr3B 47193040 47195734 2694 False 347.5 484 77.8170 1323 2858 2 chr3B.!!$F4 1535
4 TraesCS3B01G076200 chr3A 37821585 37823990 2405 True 1721.0 3190 94.3780 850 3140 2 chr3A.!!$R1 2290
5 TraesCS3B01G076200 chr3D 27948418 27950685 2267 False 1439.0 1847 90.1455 850 3140 2 chr3D.!!$F1 2290
6 TraesCS3B01G076200 chr3D 27680708 27681531 823 True 412.0 412 76.4640 1451 2255 1 chr3D.!!$R2 804

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 847 0.034059 CTTAGGAGCGGGCATGTAGG 59.966 60.0 0.0 0.0 0.0 3.18 F
555 849 0.178932 TAGGAGCGGGCATGTAGGAT 60.179 55.0 0.0 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1561 1891 0.528684 GAGTAGACACATGCGAGGGC 60.529 60.000 0.0 0.0 40.52 5.19 R
2316 2706 4.284746 AGCAGTTTACTCAGCTACTCCTTT 59.715 41.667 0.0 0.0 35.19 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.935481 GCTTTGCTCATTCCTTCTGG 57.065 50.000 0.00 0.00 0.00 3.86
20 21 1.135170 GCTTTGCTCATTCCTTCTGGC 60.135 52.381 0.00 0.00 0.00 4.85
21 22 2.165167 CTTTGCTCATTCCTTCTGGCA 58.835 47.619 0.00 0.00 0.00 4.92
22 23 1.538047 TTGCTCATTCCTTCTGGCAC 58.462 50.000 0.00 0.00 0.00 5.01
23 24 0.694771 TGCTCATTCCTTCTGGCACT 59.305 50.000 0.00 0.00 0.00 4.40
24 25 1.093159 GCTCATTCCTTCTGGCACTG 58.907 55.000 0.00 0.00 0.00 3.66
25 26 1.612726 GCTCATTCCTTCTGGCACTGT 60.613 52.381 0.00 0.00 0.00 3.55
26 27 2.355108 GCTCATTCCTTCTGGCACTGTA 60.355 50.000 0.00 0.00 0.00 2.74
27 28 3.683847 GCTCATTCCTTCTGGCACTGTAT 60.684 47.826 0.00 0.00 0.00 2.29
28 29 4.521146 CTCATTCCTTCTGGCACTGTATT 58.479 43.478 0.00 0.00 0.00 1.89
29 30 4.922206 TCATTCCTTCTGGCACTGTATTT 58.078 39.130 0.00 0.00 0.00 1.40
30 31 4.943705 TCATTCCTTCTGGCACTGTATTTC 59.056 41.667 0.00 0.00 0.00 2.17
31 32 4.365514 TTCCTTCTGGCACTGTATTTCA 57.634 40.909 0.00 0.00 0.00 2.69
32 33 4.574674 TCCTTCTGGCACTGTATTTCAT 57.425 40.909 0.00 0.00 0.00 2.57
33 34 4.922206 TCCTTCTGGCACTGTATTTCATT 58.078 39.130 0.00 0.00 0.00 2.57
34 35 4.701651 TCCTTCTGGCACTGTATTTCATTG 59.298 41.667 0.00 0.00 0.00 2.82
35 36 4.460382 CCTTCTGGCACTGTATTTCATTGT 59.540 41.667 0.00 0.00 0.00 2.71
36 37 5.647658 CCTTCTGGCACTGTATTTCATTGTA 59.352 40.000 0.00 0.00 0.00 2.41
37 38 6.150976 CCTTCTGGCACTGTATTTCATTGTAA 59.849 38.462 0.00 0.00 0.00 2.41
38 39 7.148018 CCTTCTGGCACTGTATTTCATTGTAAT 60.148 37.037 0.00 0.00 0.00 1.89
39 40 7.701539 TCTGGCACTGTATTTCATTGTAATT 57.298 32.000 0.00 0.00 0.00 1.40
40 41 7.537715 TCTGGCACTGTATTTCATTGTAATTG 58.462 34.615 0.00 0.00 0.00 2.32
41 42 7.176515 TCTGGCACTGTATTTCATTGTAATTGT 59.823 33.333 0.00 0.00 0.00 2.71
42 43 7.665690 TGGCACTGTATTTCATTGTAATTGTT 58.334 30.769 0.00 0.00 0.00 2.83
43 44 8.147058 TGGCACTGTATTTCATTGTAATTGTTT 58.853 29.630 0.00 0.00 0.00 2.83
44 45 8.987890 GGCACTGTATTTCATTGTAATTGTTTT 58.012 29.630 0.00 0.00 0.00 2.43
45 46 9.796062 GCACTGTATTTCATTGTAATTGTTTTG 57.204 29.630 0.00 0.00 0.00 2.44
46 47 9.796062 CACTGTATTTCATTGTAATTGTTTTGC 57.204 29.630 0.00 0.00 0.00 3.68
47 48 9.762933 ACTGTATTTCATTGTAATTGTTTTGCT 57.237 25.926 0.00 0.00 0.00 3.91
49 50 9.755804 TGTATTTCATTGTAATTGTTTTGCTCA 57.244 25.926 0.00 0.00 0.00 4.26
51 52 8.891671 ATTTCATTGTAATTGTTTTGCTCACT 57.108 26.923 0.00 0.00 0.00 3.41
52 53 8.715191 TTTCATTGTAATTGTTTTGCTCACTT 57.285 26.923 0.00 0.00 0.00 3.16
53 54 7.697352 TCATTGTAATTGTTTTGCTCACTTG 57.303 32.000 0.00 0.00 0.00 3.16
54 55 7.264221 TCATTGTAATTGTTTTGCTCACTTGT 58.736 30.769 0.00 0.00 0.00 3.16
55 56 6.884096 TTGTAATTGTTTTGCTCACTTGTG 57.116 33.333 0.00 0.00 0.00 3.33
56 57 5.960113 TGTAATTGTTTTGCTCACTTGTGT 58.040 33.333 0.46 0.00 0.00 3.72
57 58 5.804473 TGTAATTGTTTTGCTCACTTGTGTG 59.196 36.000 0.46 0.00 45.07 3.82
58 59 3.932545 TTGTTTTGCTCACTTGTGTGT 57.067 38.095 0.46 0.00 44.14 3.72
59 60 3.214697 TGTTTTGCTCACTTGTGTGTG 57.785 42.857 0.46 0.00 44.14 3.82
60 61 2.816672 TGTTTTGCTCACTTGTGTGTGA 59.183 40.909 0.46 0.00 44.14 3.58
69 70 5.539582 TCACTTGTGTGTGAGTAAACAAC 57.460 39.130 0.46 0.00 44.14 3.32
70 71 4.998033 TCACTTGTGTGTGAGTAAACAACA 59.002 37.500 0.46 0.00 44.14 3.33
71 72 5.121611 TCACTTGTGTGTGAGTAAACAACAG 59.878 40.000 0.46 0.00 44.14 3.16
72 73 5.121611 CACTTGTGTGTGAGTAAACAACAGA 59.878 40.000 0.00 0.00 40.12 3.41
73 74 5.703592 ACTTGTGTGTGAGTAAACAACAGAA 59.296 36.000 0.00 0.00 0.00 3.02
74 75 6.374333 ACTTGTGTGTGAGTAAACAACAGAAT 59.626 34.615 0.00 0.00 0.00 2.40
75 76 6.117911 TGTGTGTGAGTAAACAACAGAATG 57.882 37.500 0.00 0.00 46.00 2.67
76 77 4.970003 GTGTGTGAGTAAACAACAGAATGC 59.030 41.667 0.00 0.00 42.53 3.56
77 78 4.881273 TGTGTGAGTAAACAACAGAATGCT 59.119 37.500 0.00 0.00 42.53 3.79
78 79 5.356751 TGTGTGAGTAAACAACAGAATGCTT 59.643 36.000 0.00 0.00 42.53 3.91
79 80 5.682862 GTGTGAGTAAACAACAGAATGCTTG 59.317 40.000 0.00 0.00 42.53 4.01
80 81 5.215160 GTGAGTAAACAACAGAATGCTTGG 58.785 41.667 0.00 0.00 42.53 3.61
81 82 4.229876 GAGTAAACAACAGAATGCTTGGC 58.770 43.478 0.00 0.00 42.53 4.52
82 83 3.891366 AGTAAACAACAGAATGCTTGGCT 59.109 39.130 0.00 0.00 42.53 4.75
83 84 3.825143 AAACAACAGAATGCTTGGCTT 57.175 38.095 0.00 0.00 42.53 4.35
84 85 4.935352 AAACAACAGAATGCTTGGCTTA 57.065 36.364 0.00 0.00 42.53 3.09
85 86 4.935352 AACAACAGAATGCTTGGCTTAA 57.065 36.364 0.00 0.00 42.53 1.85
86 87 4.243007 ACAACAGAATGCTTGGCTTAAC 57.757 40.909 0.00 0.00 42.53 2.01
87 88 3.891366 ACAACAGAATGCTTGGCTTAACT 59.109 39.130 0.00 0.00 42.53 2.24
88 89 5.070001 ACAACAGAATGCTTGGCTTAACTA 58.930 37.500 0.00 0.00 42.53 2.24
89 90 5.182001 ACAACAGAATGCTTGGCTTAACTAG 59.818 40.000 0.00 0.00 42.53 2.57
90 91 5.165961 ACAGAATGCTTGGCTTAACTAGA 57.834 39.130 0.00 0.00 42.53 2.43
91 92 4.938226 ACAGAATGCTTGGCTTAACTAGAC 59.062 41.667 0.00 0.00 42.53 2.59
92 93 4.937620 CAGAATGCTTGGCTTAACTAGACA 59.062 41.667 0.00 0.00 41.30 3.41
93 94 4.938226 AGAATGCTTGGCTTAACTAGACAC 59.062 41.667 0.00 0.00 43.26 3.67
94 95 3.053831 TGCTTGGCTTAACTAGACACC 57.946 47.619 0.00 0.00 43.26 4.16
95 96 2.000447 GCTTGGCTTAACTAGACACCG 59.000 52.381 0.00 0.00 43.26 4.94
96 97 2.618053 CTTGGCTTAACTAGACACCGG 58.382 52.381 0.00 0.00 43.26 5.28
97 98 1.927487 TGGCTTAACTAGACACCGGA 58.073 50.000 9.46 0.00 36.81 5.14
98 99 2.463752 TGGCTTAACTAGACACCGGAT 58.536 47.619 9.46 0.00 36.81 4.18
99 100 2.835764 TGGCTTAACTAGACACCGGATT 59.164 45.455 9.46 0.00 36.81 3.01
100 101 3.262405 TGGCTTAACTAGACACCGGATTT 59.738 43.478 9.46 0.00 36.81 2.17
101 102 3.869832 GGCTTAACTAGACACCGGATTTC 59.130 47.826 9.46 0.14 0.00 2.17
102 103 3.869832 GCTTAACTAGACACCGGATTTCC 59.130 47.826 9.46 0.00 0.00 3.13
103 104 4.622220 GCTTAACTAGACACCGGATTTCCA 60.622 45.833 9.46 0.00 35.14 3.53
104 105 5.671493 CTTAACTAGACACCGGATTTCCAT 58.329 41.667 9.46 0.00 35.14 3.41
105 106 4.569719 AACTAGACACCGGATTTCCATT 57.430 40.909 9.46 0.00 35.14 3.16
106 107 3.873910 ACTAGACACCGGATTTCCATTG 58.126 45.455 9.46 0.00 35.14 2.82
107 108 2.879103 AGACACCGGATTTCCATTGT 57.121 45.000 9.46 0.00 34.39 2.71
108 109 3.992943 AGACACCGGATTTCCATTGTA 57.007 42.857 9.46 0.00 32.52 2.41
109 110 4.295141 AGACACCGGATTTCCATTGTAA 57.705 40.909 9.46 0.00 32.52 2.41
110 111 4.658063 AGACACCGGATTTCCATTGTAAA 58.342 39.130 9.46 0.00 32.52 2.01
111 112 5.261216 AGACACCGGATTTCCATTGTAAAT 58.739 37.500 9.46 0.00 32.52 1.40
112 113 5.714806 AGACACCGGATTTCCATTGTAAATT 59.285 36.000 9.46 0.00 32.52 1.82
113 114 6.210584 AGACACCGGATTTCCATTGTAAATTT 59.789 34.615 9.46 0.00 32.52 1.82
114 115 6.764379 ACACCGGATTTCCATTGTAAATTTT 58.236 32.000 9.46 0.00 35.14 1.82
115 116 7.220740 ACACCGGATTTCCATTGTAAATTTTT 58.779 30.769 9.46 0.00 35.14 1.94
116 117 7.386573 ACACCGGATTTCCATTGTAAATTTTTC 59.613 33.333 9.46 0.00 35.14 2.29
117 118 7.602265 CACCGGATTTCCATTGTAAATTTTTCT 59.398 33.333 9.46 0.00 35.14 2.52
118 119 7.602265 ACCGGATTTCCATTGTAAATTTTTCTG 59.398 33.333 9.46 0.00 35.14 3.02
119 120 7.064490 CCGGATTTCCATTGTAAATTTTTCTGG 59.936 37.037 0.00 0.00 35.14 3.86
120 121 7.602265 CGGATTTCCATTGTAAATTTTTCTGGT 59.398 33.333 0.00 0.00 35.14 4.00
121 122 8.935844 GGATTTCCATTGTAAATTTTTCTGGTC 58.064 33.333 0.00 0.00 35.64 4.02
122 123 9.710900 GATTTCCATTGTAAATTTTTCTGGTCT 57.289 29.630 0.00 0.00 0.00 3.85
146 147 9.352784 TCTAAATTTATCTTTTCAAATGGTGCG 57.647 29.630 0.00 0.00 0.00 5.34
147 148 6.407475 AATTTATCTTTTCAAATGGTGCGC 57.593 33.333 0.00 0.00 0.00 6.09
148 149 1.981254 ATCTTTTCAAATGGTGCGCG 58.019 45.000 0.00 0.00 0.00 6.86
149 150 0.947960 TCTTTTCAAATGGTGCGCGA 59.052 45.000 12.10 0.00 0.00 5.87
150 151 1.052287 CTTTTCAAATGGTGCGCGAC 58.948 50.000 12.10 5.05 0.00 5.19
151 152 0.382158 TTTTCAAATGGTGCGCGACA 59.618 45.000 12.10 5.50 0.00 4.35
152 153 0.595588 TTTCAAATGGTGCGCGACAT 59.404 45.000 12.10 8.05 0.00 3.06
153 154 0.109827 TTCAAATGGTGCGCGACATG 60.110 50.000 12.10 7.69 0.00 3.21
154 155 1.514657 CAAATGGTGCGCGACATGG 60.515 57.895 12.10 8.91 0.00 3.66
155 156 1.673993 AAATGGTGCGCGACATGGA 60.674 52.632 12.10 0.00 0.00 3.41
156 157 1.647545 AAATGGTGCGCGACATGGAG 61.648 55.000 12.10 0.00 0.00 3.86
162 163 2.887568 CGCGACATGGAGCACCTC 60.888 66.667 0.00 0.00 37.04 3.85
163 164 2.581354 GCGACATGGAGCACCTCT 59.419 61.111 9.38 0.00 37.04 3.69
164 165 1.078848 GCGACATGGAGCACCTCTT 60.079 57.895 9.38 0.00 37.04 2.85
165 166 0.674895 GCGACATGGAGCACCTCTTT 60.675 55.000 9.38 0.00 37.04 2.52
166 167 1.081892 CGACATGGAGCACCTCTTTG 58.918 55.000 0.71 0.00 37.04 2.77
167 168 1.457346 GACATGGAGCACCTCTTTGG 58.543 55.000 0.71 0.00 42.93 3.28
168 169 0.038744 ACATGGAGCACCTCTTTGGG 59.961 55.000 0.71 0.00 41.11 4.12
169 170 0.682209 CATGGAGCACCTCTTTGGGG 60.682 60.000 0.71 0.00 43.81 4.96
170 171 0.846427 ATGGAGCACCTCTTTGGGGA 60.846 55.000 0.71 0.00 43.63 4.81
171 172 1.002011 GGAGCACCTCTTTGGGGAC 60.002 63.158 0.00 0.00 43.63 4.46
172 173 1.376037 GAGCACCTCTTTGGGGACG 60.376 63.158 0.00 0.00 43.63 4.79
173 174 2.113243 GAGCACCTCTTTGGGGACGT 62.113 60.000 0.00 0.00 43.63 4.34
174 175 1.966451 GCACCTCTTTGGGGACGTG 60.966 63.158 0.00 0.00 43.63 4.49
175 176 1.966451 CACCTCTTTGGGGACGTGC 60.966 63.158 0.00 0.00 43.63 5.34
176 177 2.359975 CCTCTTTGGGGACGTGCC 60.360 66.667 19.24 19.24 0.00 5.01
177 178 2.742372 CTCTTTGGGGACGTGCCG 60.742 66.667 20.65 6.18 37.63 5.69
178 179 3.530910 CTCTTTGGGGACGTGCCGT 62.531 63.158 20.65 0.00 45.10 5.68
179 180 3.353836 CTTTGGGGACGTGCCGTG 61.354 66.667 20.65 5.97 41.37 4.94
180 181 3.818121 CTTTGGGGACGTGCCGTGA 62.818 63.158 20.65 5.27 41.37 4.35
181 182 3.818121 TTTGGGGACGTGCCGTGAG 62.818 63.158 20.65 0.00 41.37 3.51
197 198 3.966154 CGTGAGGAATCGTGTATTAGCT 58.034 45.455 0.00 0.00 0.00 3.32
198 199 4.360563 CGTGAGGAATCGTGTATTAGCTT 58.639 43.478 0.00 0.00 0.00 3.74
199 200 5.516996 CGTGAGGAATCGTGTATTAGCTTA 58.483 41.667 0.00 0.00 0.00 3.09
200 201 5.625721 CGTGAGGAATCGTGTATTAGCTTAG 59.374 44.000 0.00 0.00 0.00 2.18
201 202 6.512903 CGTGAGGAATCGTGTATTAGCTTAGA 60.513 42.308 0.00 0.00 0.00 2.10
202 203 7.371936 GTGAGGAATCGTGTATTAGCTTAGAT 58.628 38.462 0.00 0.00 0.00 1.98
203 204 7.868415 GTGAGGAATCGTGTATTAGCTTAGATT 59.132 37.037 0.00 0.00 0.00 2.40
204 205 7.867909 TGAGGAATCGTGTATTAGCTTAGATTG 59.132 37.037 0.00 0.00 0.00 2.67
205 206 6.647067 AGGAATCGTGTATTAGCTTAGATTGC 59.353 38.462 0.00 0.00 35.95 3.56
206 207 6.647067 GGAATCGTGTATTAGCTTAGATTGCT 59.353 38.462 0.00 0.00 43.79 3.91
207 208 7.813148 GGAATCGTGTATTAGCTTAGATTGCTA 59.187 37.037 0.00 0.00 41.46 3.49
208 209 8.749841 AATCGTGTATTAGCTTAGATTGCTAG 57.250 34.615 0.00 0.00 42.89 3.42
209 210 7.506328 TCGTGTATTAGCTTAGATTGCTAGA 57.494 36.000 0.00 0.00 42.89 2.43
210 211 7.585867 TCGTGTATTAGCTTAGATTGCTAGAG 58.414 38.462 0.00 0.00 42.89 2.43
211 212 7.228906 TCGTGTATTAGCTTAGATTGCTAGAGT 59.771 37.037 0.00 0.00 42.89 3.24
212 213 8.504815 CGTGTATTAGCTTAGATTGCTAGAGTA 58.495 37.037 0.00 0.00 42.89 2.59
213 214 9.834628 GTGTATTAGCTTAGATTGCTAGAGTAG 57.165 37.037 0.00 0.00 42.89 2.57
214 215 9.015367 TGTATTAGCTTAGATTGCTAGAGTAGG 57.985 37.037 0.00 0.00 42.89 3.18
215 216 9.233649 GTATTAGCTTAGATTGCTAGAGTAGGA 57.766 37.037 0.00 0.00 42.89 2.94
216 217 8.713708 ATTAGCTTAGATTGCTAGAGTAGGAA 57.286 34.615 0.00 0.00 42.89 3.36
217 218 6.648879 AGCTTAGATTGCTAGAGTAGGAAG 57.351 41.667 0.00 0.00 39.52 3.46
218 219 6.133356 AGCTTAGATTGCTAGAGTAGGAAGT 58.867 40.000 0.00 0.00 39.52 3.01
219 220 6.264518 AGCTTAGATTGCTAGAGTAGGAAGTC 59.735 42.308 0.00 0.00 39.52 3.01
220 221 6.516028 GCTTAGATTGCTAGAGTAGGAAGTCC 60.516 46.154 0.00 0.00 39.52 3.85
221 222 4.219919 AGATTGCTAGAGTAGGAAGTCCC 58.780 47.826 0.00 0.00 39.52 4.46
223 224 4.875578 TTGCTAGAGTAGGAAGTCCCTA 57.124 45.455 0.00 0.00 45.48 3.53
230 231 1.424638 TAGGAAGTCCCTATGCTGGC 58.575 55.000 0.00 0.00 45.48 4.85
231 232 0.327000 AGGAAGTCCCTATGCTGGCT 60.327 55.000 0.00 0.00 45.48 4.75
232 233 0.179034 GGAAGTCCCTATGCTGGCTG 60.179 60.000 0.00 0.00 0.00 4.85
233 234 0.543749 GAAGTCCCTATGCTGGCTGT 59.456 55.000 0.00 0.00 0.00 4.40
234 235 1.762957 GAAGTCCCTATGCTGGCTGTA 59.237 52.381 0.00 0.00 0.00 2.74
235 236 2.109229 AGTCCCTATGCTGGCTGTAT 57.891 50.000 0.21 0.21 0.00 2.29
236 237 2.412591 AGTCCCTATGCTGGCTGTATT 58.587 47.619 0.00 0.00 0.00 1.89
237 238 2.780010 AGTCCCTATGCTGGCTGTATTT 59.220 45.455 0.00 0.00 0.00 1.40
238 239 3.142174 GTCCCTATGCTGGCTGTATTTC 58.858 50.000 0.00 0.00 0.00 2.17
239 240 3.048600 TCCCTATGCTGGCTGTATTTCT 58.951 45.455 0.00 0.00 0.00 2.52
240 241 3.071602 TCCCTATGCTGGCTGTATTTCTC 59.928 47.826 0.00 0.00 0.00 2.87
241 242 3.181451 CCCTATGCTGGCTGTATTTCTCA 60.181 47.826 0.00 0.00 0.00 3.27
242 243 4.454678 CCTATGCTGGCTGTATTTCTCAA 58.545 43.478 0.00 0.00 0.00 3.02
243 244 4.883585 CCTATGCTGGCTGTATTTCTCAAA 59.116 41.667 0.00 0.00 0.00 2.69
244 245 5.533903 CCTATGCTGGCTGTATTTCTCAAAT 59.466 40.000 0.00 0.00 34.90 2.32
245 246 5.927281 ATGCTGGCTGTATTTCTCAAATT 57.073 34.783 0.00 0.00 32.38 1.82
246 247 5.314923 TGCTGGCTGTATTTCTCAAATTC 57.685 39.130 0.00 0.00 32.38 2.17
247 248 5.012239 TGCTGGCTGTATTTCTCAAATTCT 58.988 37.500 0.00 0.00 32.38 2.40
248 249 5.477984 TGCTGGCTGTATTTCTCAAATTCTT 59.522 36.000 0.00 0.00 32.38 2.52
249 250 6.015180 TGCTGGCTGTATTTCTCAAATTCTTT 60.015 34.615 0.00 0.00 32.38 2.52
250 251 6.529477 GCTGGCTGTATTTCTCAAATTCTTTC 59.471 38.462 0.00 0.00 32.38 2.62
251 252 7.523293 TGGCTGTATTTCTCAAATTCTTTCA 57.477 32.000 0.00 0.00 32.38 2.69
252 253 7.370383 TGGCTGTATTTCTCAAATTCTTTCAC 58.630 34.615 0.00 0.00 32.38 3.18
253 254 6.808704 GGCTGTATTTCTCAAATTCTTTCACC 59.191 38.462 0.00 0.00 32.38 4.02
254 255 6.808704 GCTGTATTTCTCAAATTCTTTCACCC 59.191 38.462 0.00 0.00 32.38 4.61
255 256 7.227049 TGTATTTCTCAAATTCTTTCACCCC 57.773 36.000 0.00 0.00 32.38 4.95
256 257 7.010160 TGTATTTCTCAAATTCTTTCACCCCT 58.990 34.615 0.00 0.00 32.38 4.79
257 258 5.789643 TTTCTCAAATTCTTTCACCCCTG 57.210 39.130 0.00 0.00 0.00 4.45
258 259 4.722526 TCTCAAATTCTTTCACCCCTGA 57.277 40.909 0.00 0.00 0.00 3.86
259 260 5.261040 TCTCAAATTCTTTCACCCCTGAT 57.739 39.130 0.00 0.00 0.00 2.90
260 261 5.256474 TCTCAAATTCTTTCACCCCTGATC 58.744 41.667 0.00 0.00 0.00 2.92
261 262 4.996793 TCAAATTCTTTCACCCCTGATCA 58.003 39.130 0.00 0.00 0.00 2.92
262 263 4.766891 TCAAATTCTTTCACCCCTGATCAC 59.233 41.667 0.00 0.00 0.00 3.06
263 264 2.879103 TTCTTTCACCCCTGATCACC 57.121 50.000 0.00 0.00 0.00 4.02
264 265 1.741028 TCTTTCACCCCTGATCACCA 58.259 50.000 0.00 0.00 0.00 4.17
265 266 2.278245 TCTTTCACCCCTGATCACCAT 58.722 47.619 0.00 0.00 0.00 3.55
266 267 2.239654 TCTTTCACCCCTGATCACCATC 59.760 50.000 0.00 0.00 0.00 3.51
267 268 1.667595 TTCACCCCTGATCACCATCA 58.332 50.000 0.00 0.00 36.62 3.07
268 269 1.667595 TCACCCCTGATCACCATCAA 58.332 50.000 0.00 0.00 38.63 2.57
269 270 1.281867 TCACCCCTGATCACCATCAAC 59.718 52.381 0.00 0.00 38.63 3.18
270 271 1.004628 CACCCCTGATCACCATCAACA 59.995 52.381 0.00 0.00 38.63 3.33
271 272 1.004745 ACCCCTGATCACCATCAACAC 59.995 52.381 0.00 0.00 38.63 3.32
272 273 1.283029 CCCCTGATCACCATCAACACT 59.717 52.381 0.00 0.00 38.63 3.55
273 274 2.291153 CCCCTGATCACCATCAACACTT 60.291 50.000 0.00 0.00 38.63 3.16
274 275 2.751259 CCCTGATCACCATCAACACTTG 59.249 50.000 0.00 0.00 38.63 3.16
275 276 3.415212 CCTGATCACCATCAACACTTGT 58.585 45.455 0.00 0.00 38.63 3.16
276 277 3.822735 CCTGATCACCATCAACACTTGTT 59.177 43.478 0.00 0.00 38.63 2.83
277 278 4.279169 CCTGATCACCATCAACACTTGTTT 59.721 41.667 0.00 0.00 38.63 2.83
278 279 5.221303 CCTGATCACCATCAACACTTGTTTT 60.221 40.000 0.00 0.00 38.63 2.43
279 280 5.830912 TGATCACCATCAACACTTGTTTTC 58.169 37.500 0.00 0.00 35.99 2.29
280 281 5.593909 TGATCACCATCAACACTTGTTTTCT 59.406 36.000 0.00 0.00 35.99 2.52
281 282 5.247507 TCACCATCAACACTTGTTTTCTG 57.752 39.130 0.00 0.00 35.83 3.02
282 283 3.798337 CACCATCAACACTTGTTTTCTGC 59.202 43.478 0.00 0.00 35.83 4.26
283 284 3.181476 ACCATCAACACTTGTTTTCTGCC 60.181 43.478 0.00 0.00 35.83 4.85
284 285 3.068590 CCATCAACACTTGTTTTCTGCCT 59.931 43.478 0.00 0.00 35.83 4.75
285 286 4.441913 CCATCAACACTTGTTTTCTGCCTT 60.442 41.667 0.00 0.00 35.83 4.35
286 287 4.370364 TCAACACTTGTTTTCTGCCTTC 57.630 40.909 0.00 0.00 35.83 3.46
287 288 4.016444 TCAACACTTGTTTTCTGCCTTCT 58.984 39.130 0.00 0.00 35.83 2.85
288 289 5.189928 TCAACACTTGTTTTCTGCCTTCTA 58.810 37.500 0.00 0.00 35.83 2.10
289 290 5.827797 TCAACACTTGTTTTCTGCCTTCTAT 59.172 36.000 0.00 0.00 35.83 1.98
290 291 5.948992 ACACTTGTTTTCTGCCTTCTATC 57.051 39.130 0.00 0.00 0.00 2.08
291 292 5.625150 ACACTTGTTTTCTGCCTTCTATCT 58.375 37.500 0.00 0.00 0.00 1.98
292 293 5.471456 ACACTTGTTTTCTGCCTTCTATCTG 59.529 40.000 0.00 0.00 0.00 2.90
293 294 4.457257 ACTTGTTTTCTGCCTTCTATCTGC 59.543 41.667 0.00 0.00 0.00 4.26
294 295 4.292186 TGTTTTCTGCCTTCTATCTGCT 57.708 40.909 0.00 0.00 0.00 4.24
295 296 5.420725 TGTTTTCTGCCTTCTATCTGCTA 57.579 39.130 0.00 0.00 0.00 3.49
296 297 5.804639 TGTTTTCTGCCTTCTATCTGCTAA 58.195 37.500 0.00 0.00 0.00 3.09
297 298 6.418101 TGTTTTCTGCCTTCTATCTGCTAAT 58.582 36.000 0.00 0.00 0.00 1.73
298 299 6.317140 TGTTTTCTGCCTTCTATCTGCTAATG 59.683 38.462 0.00 0.00 0.00 1.90
299 300 5.876651 TTCTGCCTTCTATCTGCTAATGA 57.123 39.130 0.00 0.00 0.00 2.57
300 301 5.876651 TCTGCCTTCTATCTGCTAATGAA 57.123 39.130 0.00 0.00 0.00 2.57
301 302 6.239217 TCTGCCTTCTATCTGCTAATGAAA 57.761 37.500 0.00 0.00 0.00 2.69
302 303 6.835174 TCTGCCTTCTATCTGCTAATGAAAT 58.165 36.000 0.00 0.00 0.00 2.17
303 304 6.709397 TCTGCCTTCTATCTGCTAATGAAATG 59.291 38.462 0.00 0.00 0.00 2.32
304 305 6.594744 TGCCTTCTATCTGCTAATGAAATGA 58.405 36.000 0.00 0.00 0.00 2.57
305 306 6.709397 TGCCTTCTATCTGCTAATGAAATGAG 59.291 38.462 0.00 0.00 0.00 2.90
306 307 6.709846 GCCTTCTATCTGCTAATGAAATGAGT 59.290 38.462 0.00 0.00 0.00 3.41
307 308 7.307870 GCCTTCTATCTGCTAATGAAATGAGTG 60.308 40.741 0.00 0.00 0.00 3.51
308 309 7.714377 CCTTCTATCTGCTAATGAAATGAGTGT 59.286 37.037 0.00 0.00 0.00 3.55
309 310 8.654230 TTCTATCTGCTAATGAAATGAGTGTC 57.346 34.615 0.00 0.00 0.00 3.67
310 311 7.785033 TCTATCTGCTAATGAAATGAGTGTCA 58.215 34.615 0.00 0.00 0.00 3.58
311 312 6.922247 ATCTGCTAATGAAATGAGTGTCAG 57.078 37.500 0.00 0.00 0.00 3.51
312 313 4.633126 TCTGCTAATGAAATGAGTGTCAGC 59.367 41.667 0.00 0.00 0.00 4.26
313 314 4.325972 TGCTAATGAAATGAGTGTCAGCA 58.674 39.130 0.00 0.00 0.00 4.41
314 315 4.154737 TGCTAATGAAATGAGTGTCAGCAC 59.845 41.667 0.00 0.00 45.57 4.40
331 332 3.648339 GCACAAGCTGGATCTTTCAAA 57.352 42.857 0.00 0.00 37.91 2.69
332 333 3.981211 GCACAAGCTGGATCTTTCAAAA 58.019 40.909 0.00 0.00 37.91 2.44
333 334 3.985925 GCACAAGCTGGATCTTTCAAAAG 59.014 43.478 0.00 0.00 37.91 2.27
334 335 4.261741 GCACAAGCTGGATCTTTCAAAAGA 60.262 41.667 7.59 7.59 42.49 2.52
335 336 5.737063 GCACAAGCTGGATCTTTCAAAAGAA 60.737 40.000 9.11 0.00 42.02 2.52
336 337 7.176409 GCACAAGCTGGATCTTTCAAAAGAAA 61.176 38.462 9.11 0.00 42.02 2.52
337 338 8.583713 GCACAAGCTGGATCTTTCAAAAGAAAA 61.584 37.037 9.11 0.00 42.02 2.29
347 348 7.232945 TCTTTCAAAAGAAAAGAAAATGGCG 57.767 32.000 2.74 0.00 41.75 5.69
351 352 0.729140 AGAAAAGAAAATGGCGCGCG 60.729 50.000 28.44 28.44 0.00 6.86
355 356 1.017177 AAGAAAATGGCGCGCGACTA 61.017 50.000 37.99 23.56 0.00 2.59
381 382 0.462759 CTTCAGGCCGACCAGATTCC 60.463 60.000 0.00 0.00 39.06 3.01
386 387 1.452108 GCCGACCAGATTCCAAGGG 60.452 63.158 0.00 0.00 0.00 3.95
387 388 1.224592 CCGACCAGATTCCAAGGGG 59.775 63.158 0.00 0.00 0.00 4.79
395 396 0.323451 GATTCCAAGGGGGCGAAAGT 60.323 55.000 0.00 0.00 36.21 2.66
404 405 1.147473 GGGGCGAAAGTTGCATTTTG 58.853 50.000 1.84 0.00 0.00 2.44
409 410 3.302415 GGCGAAAGTTGCATTTTGAACAC 60.302 43.478 4.50 0.00 0.00 3.32
417 418 2.046313 GCATTTTGAACACACTGAGCG 58.954 47.619 0.00 0.00 0.00 5.03
451 741 6.360681 CAGCAAAAAGTGTAAATACTGAGTGC 59.639 38.462 0.00 0.00 34.27 4.40
455 745 6.787085 AAAGTGTAAATACTGAGTGCAGAC 57.213 37.500 0.00 0.00 45.17 3.51
456 746 4.822026 AGTGTAAATACTGAGTGCAGACC 58.178 43.478 0.00 0.00 45.17 3.85
459 749 1.656587 AATACTGAGTGCAGACCCCA 58.343 50.000 0.00 0.00 45.17 4.96
460 750 1.885049 ATACTGAGTGCAGACCCCAT 58.115 50.000 0.00 0.00 45.17 4.00
471 761 2.843701 CAGACCCCATCATAAGACTGC 58.156 52.381 0.00 0.00 0.00 4.40
474 764 0.250467 CCCCATCATAAGACTGCCCG 60.250 60.000 0.00 0.00 0.00 6.13
475 765 0.886490 CCCATCATAAGACTGCCCGC 60.886 60.000 0.00 0.00 0.00 6.13
476 766 0.179048 CCATCATAAGACTGCCCGCA 60.179 55.000 0.00 0.00 0.00 5.69
500 794 1.984026 GTGCTTCCAATGGGGTGGG 60.984 63.158 0.00 0.00 39.34 4.61
507 801 1.984026 CAATGGGGTGGGGCTCAAC 60.984 63.158 0.00 0.00 0.00 3.18
513 807 0.958876 GGGTGGGGCTCAACGTTAAG 60.959 60.000 0.00 0.00 32.74 1.85
514 808 0.958876 GGTGGGGCTCAACGTTAAGG 60.959 60.000 0.00 0.00 0.00 2.69
515 809 0.958876 GTGGGGCTCAACGTTAAGGG 60.959 60.000 0.00 0.00 0.00 3.95
516 810 2.044555 GGGGCTCAACGTTAAGGGC 61.045 63.158 0.00 0.17 0.00 5.19
517 811 1.302993 GGGCTCAACGTTAAGGGCA 60.303 57.895 12.05 0.00 0.00 5.36
518 812 0.679960 GGGCTCAACGTTAAGGGCAT 60.680 55.000 12.05 0.00 0.00 4.40
519 813 0.451783 GGCTCAACGTTAAGGGCATG 59.548 55.000 12.05 0.00 0.00 4.06
520 814 1.165270 GCTCAACGTTAAGGGCATGT 58.835 50.000 0.00 0.00 0.00 3.21
521 815 2.352388 GCTCAACGTTAAGGGCATGTA 58.648 47.619 0.00 0.00 0.00 2.29
522 816 2.095372 GCTCAACGTTAAGGGCATGTAC 59.905 50.000 0.00 0.00 0.00 2.90
523 817 3.331150 CTCAACGTTAAGGGCATGTACA 58.669 45.455 0.00 0.00 0.00 2.90
524 818 3.741249 TCAACGTTAAGGGCATGTACAA 58.259 40.909 0.00 0.00 0.00 2.41
525 819 4.328536 TCAACGTTAAGGGCATGTACAAT 58.671 39.130 0.00 0.00 0.00 2.71
526 820 4.762765 TCAACGTTAAGGGCATGTACAATT 59.237 37.500 0.00 0.00 0.00 2.32
527 821 5.938710 TCAACGTTAAGGGCATGTACAATTA 59.061 36.000 0.00 0.00 0.00 1.40
528 822 6.600032 TCAACGTTAAGGGCATGTACAATTAT 59.400 34.615 0.00 0.00 0.00 1.28
529 823 6.371809 ACGTTAAGGGCATGTACAATTATG 57.628 37.500 0.00 0.00 0.00 1.90
530 824 5.212194 CGTTAAGGGCATGTACAATTATGC 58.788 41.667 10.12 10.12 46.76 3.14
531 825 5.008613 CGTTAAGGGCATGTACAATTATGCT 59.991 40.000 16.47 2.77 46.69 3.79
532 826 6.203915 CGTTAAGGGCATGTACAATTATGCTA 59.796 38.462 16.47 1.95 46.69 3.49
533 827 7.094805 CGTTAAGGGCATGTACAATTATGCTAT 60.095 37.037 16.47 7.70 46.69 2.97
534 828 6.824305 AAGGGCATGTACAATTATGCTATC 57.176 37.500 16.47 8.57 46.69 2.08
535 829 6.131972 AGGGCATGTACAATTATGCTATCT 57.868 37.500 16.47 10.22 46.69 1.98
536 830 6.546484 AGGGCATGTACAATTATGCTATCTT 58.454 36.000 16.47 0.00 46.69 2.40
537 831 7.689299 AGGGCATGTACAATTATGCTATCTTA 58.311 34.615 16.47 0.00 46.69 2.10
538 832 7.826252 AGGGCATGTACAATTATGCTATCTTAG 59.174 37.037 16.47 0.00 46.69 2.18
539 833 7.066284 GGGCATGTACAATTATGCTATCTTAGG 59.934 40.741 16.47 0.00 46.69 2.69
540 834 7.824289 GGCATGTACAATTATGCTATCTTAGGA 59.176 37.037 16.47 0.00 46.69 2.94
541 835 8.877779 GCATGTACAATTATGCTATCTTAGGAG 58.122 37.037 11.12 0.00 44.70 3.69
542 836 8.877779 CATGTACAATTATGCTATCTTAGGAGC 58.122 37.037 0.00 1.02 39.25 4.70
543 837 7.090808 TGTACAATTATGCTATCTTAGGAGCG 58.909 38.462 0.00 0.00 41.83 5.03
544 838 5.482908 ACAATTATGCTATCTTAGGAGCGG 58.517 41.667 3.38 0.00 41.83 5.52
545 839 4.744795 ATTATGCTATCTTAGGAGCGGG 57.255 45.455 3.38 0.00 41.83 6.13
546 840 0.610687 ATGCTATCTTAGGAGCGGGC 59.389 55.000 3.38 0.00 41.83 6.13
547 841 0.759060 TGCTATCTTAGGAGCGGGCA 60.759 55.000 0.00 0.00 41.83 5.36
548 842 0.610687 GCTATCTTAGGAGCGGGCAT 59.389 55.000 0.00 0.00 0.00 4.40
549 843 1.674221 GCTATCTTAGGAGCGGGCATG 60.674 57.143 0.00 0.00 0.00 4.06
550 844 1.620819 CTATCTTAGGAGCGGGCATGT 59.379 52.381 0.00 0.00 0.00 3.21
551 845 1.717032 ATCTTAGGAGCGGGCATGTA 58.283 50.000 0.00 0.00 0.00 2.29
552 846 1.040646 TCTTAGGAGCGGGCATGTAG 58.959 55.000 0.00 0.00 0.00 2.74
553 847 0.034059 CTTAGGAGCGGGCATGTAGG 59.966 60.000 0.00 0.00 0.00 3.18
554 848 0.397957 TTAGGAGCGGGCATGTAGGA 60.398 55.000 0.00 0.00 0.00 2.94
555 849 0.178932 TAGGAGCGGGCATGTAGGAT 60.179 55.000 0.00 0.00 0.00 3.24
556 850 0.178932 AGGAGCGGGCATGTAGGATA 60.179 55.000 0.00 0.00 0.00 2.59
557 851 0.685097 GGAGCGGGCATGTAGGATAA 59.315 55.000 0.00 0.00 0.00 1.75
558 852 1.071699 GGAGCGGGCATGTAGGATAAA 59.928 52.381 0.00 0.00 0.00 1.40
559 853 2.290323 GGAGCGGGCATGTAGGATAAAT 60.290 50.000 0.00 0.00 0.00 1.40
560 854 2.744202 GAGCGGGCATGTAGGATAAATG 59.256 50.000 0.00 0.00 39.36 2.32
561 855 2.106511 AGCGGGCATGTAGGATAAATGT 59.893 45.455 0.00 0.00 38.58 2.71
562 856 2.884639 GCGGGCATGTAGGATAAATGTT 59.115 45.455 0.00 0.00 38.58 2.71
563 857 4.069304 GCGGGCATGTAGGATAAATGTTA 58.931 43.478 0.00 0.00 38.58 2.41
564 858 4.517453 GCGGGCATGTAGGATAAATGTTAA 59.483 41.667 0.00 0.00 38.58 2.01
565 859 5.334879 GCGGGCATGTAGGATAAATGTTAAG 60.335 44.000 0.00 0.00 38.58 1.85
566 860 5.181245 CGGGCATGTAGGATAAATGTTAAGG 59.819 44.000 0.00 0.00 38.58 2.69
567 861 6.068670 GGGCATGTAGGATAAATGTTAAGGT 58.931 40.000 0.00 0.00 38.58 3.50
568 862 7.228590 GGGCATGTAGGATAAATGTTAAGGTA 58.771 38.462 0.00 0.00 38.58 3.08
569 863 7.390718 GGGCATGTAGGATAAATGTTAAGGTAG 59.609 40.741 0.00 0.00 38.58 3.18
570 864 8.154856 GGCATGTAGGATAAATGTTAAGGTAGA 58.845 37.037 0.00 0.00 38.58 2.59
571 865 9.209175 GCATGTAGGATAAATGTTAAGGTAGAG 57.791 37.037 0.00 0.00 38.58 2.43
572 866 9.712305 CATGTAGGATAAATGTTAAGGTAGAGG 57.288 37.037 0.00 0.00 31.47 3.69
573 867 9.670442 ATGTAGGATAAATGTTAAGGTAGAGGA 57.330 33.333 0.00 0.00 0.00 3.71
574 868 9.496710 TGTAGGATAAATGTTAAGGTAGAGGAA 57.503 33.333 0.00 0.00 0.00 3.36
577 871 9.280456 AGGATAAATGTTAAGGTAGAGGAAAGA 57.720 33.333 0.00 0.00 0.00 2.52
578 872 9.549078 GGATAAATGTTAAGGTAGAGGAAAGAG 57.451 37.037 0.00 0.00 0.00 2.85
584 878 8.660295 TGTTAAGGTAGAGGAAAGAGTAATCA 57.340 34.615 0.00 0.00 0.00 2.57
585 879 9.268282 TGTTAAGGTAGAGGAAAGAGTAATCAT 57.732 33.333 0.00 0.00 0.00 2.45
617 911 9.838339 AAGTCTTGTCTTCTCTTATTTCAAAGA 57.162 29.630 0.00 0.00 34.39 2.52
704 998 5.474578 CTAAGAGATAGCCCATTGTAGCA 57.525 43.478 0.00 0.00 0.00 3.49
705 999 3.760580 AGAGATAGCCCATTGTAGCAC 57.239 47.619 0.00 0.00 0.00 4.40
706 1000 2.370189 AGAGATAGCCCATTGTAGCACC 59.630 50.000 0.00 0.00 0.00 5.01
707 1001 2.104792 GAGATAGCCCATTGTAGCACCA 59.895 50.000 0.00 0.00 0.00 4.17
708 1002 2.713167 AGATAGCCCATTGTAGCACCAT 59.287 45.455 0.00 0.00 0.00 3.55
709 1003 2.638480 TAGCCCATTGTAGCACCATC 57.362 50.000 0.00 0.00 0.00 3.51
710 1004 0.921896 AGCCCATTGTAGCACCATCT 59.078 50.000 0.00 0.00 0.00 2.90
711 1005 1.285962 AGCCCATTGTAGCACCATCTT 59.714 47.619 0.00 0.00 0.00 2.40
712 1006 2.102578 GCCCATTGTAGCACCATCTTT 58.897 47.619 0.00 0.00 0.00 2.52
713 1007 3.053693 AGCCCATTGTAGCACCATCTTTA 60.054 43.478 0.00 0.00 0.00 1.85
714 1008 3.699038 GCCCATTGTAGCACCATCTTTAA 59.301 43.478 0.00 0.00 0.00 1.52
715 1009 4.159506 GCCCATTGTAGCACCATCTTTAAA 59.840 41.667 0.00 0.00 0.00 1.52
716 1010 5.163416 GCCCATTGTAGCACCATCTTTAAAT 60.163 40.000 0.00 0.00 0.00 1.40
717 1011 6.630188 GCCCATTGTAGCACCATCTTTAAATT 60.630 38.462 0.00 0.00 0.00 1.82
718 1012 7.417342 GCCCATTGTAGCACCATCTTTAAATTA 60.417 37.037 0.00 0.00 0.00 1.40
719 1013 7.920682 CCCATTGTAGCACCATCTTTAAATTAC 59.079 37.037 0.00 0.00 0.00 1.89
720 1014 8.465999 CCATTGTAGCACCATCTTTAAATTACA 58.534 33.333 0.00 0.00 0.00 2.41
723 1017 7.479980 TGTAGCACCATCTTTAAATTACATGC 58.520 34.615 0.00 6.01 0.00 4.06
724 1018 6.528537 AGCACCATCTTTAAATTACATGCA 57.471 33.333 13.23 0.00 0.00 3.96
725 1019 6.934056 AGCACCATCTTTAAATTACATGCAA 58.066 32.000 13.23 0.00 0.00 4.08
726 1020 7.385267 AGCACCATCTTTAAATTACATGCAAA 58.615 30.769 13.23 0.00 0.00 3.68
727 1021 7.546667 AGCACCATCTTTAAATTACATGCAAAG 59.453 33.333 13.23 0.00 0.00 2.77
728 1022 7.674705 GCACCATCTTTAAATTACATGCAAAGC 60.675 37.037 0.00 0.00 0.00 3.51
729 1023 6.531240 ACCATCTTTAAATTACATGCAAAGCG 59.469 34.615 0.00 0.00 0.00 4.68
730 1024 6.531240 CCATCTTTAAATTACATGCAAAGCGT 59.469 34.615 0.00 0.00 0.00 5.07
731 1025 7.700234 CCATCTTTAAATTACATGCAAAGCGTA 59.300 33.333 0.00 0.00 0.00 4.42
732 1026 9.071221 CATCTTTAAATTACATGCAAAGCGTAA 57.929 29.630 0.00 0.00 0.00 3.18
733 1027 8.667987 TCTTTAAATTACATGCAAAGCGTAAG 57.332 30.769 0.00 0.00 43.44 2.34
734 1028 8.508062 TCTTTAAATTACATGCAAAGCGTAAGA 58.492 29.630 0.00 0.00 43.02 2.10
735 1029 9.289303 CTTTAAATTACATGCAAAGCGTAAGAT 57.711 29.630 0.00 0.00 43.02 2.40
738 1032 8.841444 AAATTACATGCAAAGCGTAAGATAAG 57.159 30.769 0.00 0.00 43.02 1.73
739 1033 7.786178 ATTACATGCAAAGCGTAAGATAAGA 57.214 32.000 0.00 0.00 43.02 2.10
740 1034 7.603963 TTACATGCAAAGCGTAAGATAAGAA 57.396 32.000 0.00 0.00 43.02 2.52
741 1035 6.683974 ACATGCAAAGCGTAAGATAAGAAT 57.316 33.333 0.00 0.00 43.02 2.40
742 1036 6.489675 ACATGCAAAGCGTAAGATAAGAATG 58.510 36.000 0.00 0.00 43.02 2.67
743 1037 6.094048 ACATGCAAAGCGTAAGATAAGAATGT 59.906 34.615 0.00 0.00 35.06 2.71
744 1038 6.106877 TGCAAAGCGTAAGATAAGAATGTC 57.893 37.500 0.00 0.00 43.02 3.06
745 1039 5.874810 TGCAAAGCGTAAGATAAGAATGTCT 59.125 36.000 0.00 0.00 43.02 3.41
746 1040 6.371548 TGCAAAGCGTAAGATAAGAATGTCTT 59.628 34.615 0.00 0.00 39.87 3.01
747 1041 7.547722 TGCAAAGCGTAAGATAAGAATGTCTTA 59.452 33.333 0.43 0.43 39.67 2.10
762 1056 9.896645 AAGAATGTCTTATCAATCACTGTACAT 57.103 29.630 0.00 0.00 34.42 2.29
763 1057 9.322773 AGAATGTCTTATCAATCACTGTACATG 57.677 33.333 0.00 0.00 0.00 3.21
764 1058 6.908870 TGTCTTATCAATCACTGTACATGC 57.091 37.500 0.00 0.00 0.00 4.06
765 1059 6.643388 TGTCTTATCAATCACTGTACATGCT 58.357 36.000 0.00 0.00 0.00 3.79
766 1060 6.758416 TGTCTTATCAATCACTGTACATGCTC 59.242 38.462 0.00 0.00 0.00 4.26
767 1061 6.983307 GTCTTATCAATCACTGTACATGCTCT 59.017 38.462 0.00 0.00 0.00 4.09
768 1062 8.138074 GTCTTATCAATCACTGTACATGCTCTA 58.862 37.037 0.00 0.00 0.00 2.43
769 1063 8.695456 TCTTATCAATCACTGTACATGCTCTAA 58.305 33.333 0.00 0.00 0.00 2.10
773 1067 6.934083 TCAATCACTGTACATGCTCTAACAAA 59.066 34.615 0.00 0.00 0.00 2.83
810 1104 5.419542 AGAAAACAAAAGGCAAACTCTTCC 58.580 37.500 0.00 0.00 0.00 3.46
811 1105 5.187772 AGAAAACAAAAGGCAAACTCTTCCT 59.812 36.000 0.00 0.00 0.00 3.36
812 1106 6.379988 AGAAAACAAAAGGCAAACTCTTCCTA 59.620 34.615 0.00 0.00 0.00 2.94
813 1107 6.731292 AAACAAAAGGCAAACTCTTCCTAT 57.269 33.333 0.00 0.00 0.00 2.57
814 1108 5.966742 ACAAAAGGCAAACTCTTCCTATC 57.033 39.130 0.00 0.00 0.00 2.08
815 1109 4.767409 ACAAAAGGCAAACTCTTCCTATCC 59.233 41.667 0.00 0.00 0.00 2.59
816 1110 4.657814 AAAGGCAAACTCTTCCTATCCA 57.342 40.909 0.00 0.00 0.00 3.41
817 1111 4.870021 AAGGCAAACTCTTCCTATCCAT 57.130 40.909 0.00 0.00 0.00 3.41
818 1112 4.429854 AGGCAAACTCTTCCTATCCATC 57.570 45.455 0.00 0.00 0.00 3.51
819 1113 3.134458 GGCAAACTCTTCCTATCCATCG 58.866 50.000 0.00 0.00 0.00 3.84
857 1151 4.216042 TCATTCAGTACGAGTCCACGTTTA 59.784 41.667 0.00 0.00 44.14 2.01
942 1238 2.484770 CGATCGGGCCTAAGAAATCCAA 60.485 50.000 7.38 0.00 0.00 3.53
955 1251 7.273381 CCTAAGAAATCCAACATTGCTTTTACG 59.727 37.037 0.00 0.00 30.08 3.18
956 1252 5.469479 AGAAATCCAACATTGCTTTTACGG 58.531 37.500 0.00 0.00 0.00 4.02
957 1253 4.864704 AATCCAACATTGCTTTTACGGT 57.135 36.364 0.00 0.00 0.00 4.83
958 1254 5.968528 AATCCAACATTGCTTTTACGGTA 57.031 34.783 0.00 0.00 0.00 4.02
959 1255 4.752661 TCCAACATTGCTTTTACGGTAC 57.247 40.909 0.00 0.00 0.00 3.34
1171 1468 0.532573 CTTCCTCCGCAGCTTCTACA 59.467 55.000 0.00 0.00 0.00 2.74
1180 1477 1.810031 GCAGCTTCTACACACACCACA 60.810 52.381 0.00 0.00 0.00 4.17
1181 1478 2.560504 CAGCTTCTACACACACCACAA 58.439 47.619 0.00 0.00 0.00 3.33
1215 1512 3.514309 TCCTAGGCTTCTTTGAGTACCAC 59.486 47.826 2.96 0.00 0.00 4.16
1254 1551 0.831288 CCTCCATCCTCGATGCTCCT 60.831 60.000 0.00 0.00 38.59 3.69
1554 1884 6.546034 TCTTGGTGATCATGTATAGAGACGAA 59.454 38.462 0.00 0.00 0.00 3.85
1556 1886 5.147865 GGTGATCATGTATAGAGACGAACG 58.852 45.833 0.00 0.00 0.00 3.95
1561 1891 5.807344 TCATGTATAGAGACGAACGTCAAG 58.193 41.667 25.13 4.90 46.76 3.02
1587 1917 1.683917 GCATGTGTCTACTCCTCGGAT 59.316 52.381 0.00 0.00 0.00 4.18
1783 2126 6.743575 AAAATCTTTTCGTCCATAGTCAGG 57.256 37.500 0.00 0.00 0.00 3.86
1836 2185 7.095607 GGCTTTGTCGTATTATCTTATCCACAG 60.096 40.741 0.00 0.00 0.00 3.66
1950 2314 0.175302 CTCAGATTGTCAGAGGCGCT 59.825 55.000 7.64 0.00 0.00 5.92
2240 2627 2.791383 TCAACAATTGTCCCTTTGCG 57.209 45.000 12.39 0.00 0.00 4.85
2314 2704 8.784043 GTCAAAAACGCTCTTATATTATGGGAT 58.216 33.333 0.00 0.00 0.00 3.85
2557 4361 8.958119 AAAAGTTGAGCCGTAATTCATCTATA 57.042 30.769 0.00 0.00 0.00 1.31
2564 4370 9.042008 TGAGCCGTAATTCATCTATAAAAAGTC 57.958 33.333 0.00 0.00 0.00 3.01
2657 4466 3.133003 GCTTCTTCCTAGGCACTGTCATA 59.867 47.826 2.96 0.00 41.52 2.15
3069 5033 4.524802 ATGTTGAATAGGAATGGGCTCA 57.475 40.909 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.135170 GCCAGAAGGAATGAGCAAAGC 60.135 52.381 0.00 0.00 36.89 3.51
1 2 2.094854 GTGCCAGAAGGAATGAGCAAAG 60.095 50.000 0.00 0.00 36.89 2.77
2 3 1.888512 GTGCCAGAAGGAATGAGCAAA 59.111 47.619 0.00 0.00 36.89 3.68
3 4 1.074405 AGTGCCAGAAGGAATGAGCAA 59.926 47.619 0.00 0.00 36.89 3.91
4 5 0.694771 AGTGCCAGAAGGAATGAGCA 59.305 50.000 0.00 0.00 36.89 4.26
5 6 1.093159 CAGTGCCAGAAGGAATGAGC 58.907 55.000 0.00 0.00 36.89 4.26
6 7 2.486472 ACAGTGCCAGAAGGAATGAG 57.514 50.000 0.00 0.00 36.89 2.90
7 8 4.574674 AATACAGTGCCAGAAGGAATGA 57.425 40.909 0.00 0.00 36.89 2.57
8 9 4.701651 TGAAATACAGTGCCAGAAGGAATG 59.298 41.667 0.00 0.00 36.89 2.67
9 10 4.922206 TGAAATACAGTGCCAGAAGGAAT 58.078 39.130 0.00 0.00 36.89 3.01
10 11 4.365514 TGAAATACAGTGCCAGAAGGAA 57.634 40.909 0.00 0.00 36.89 3.36
11 12 4.574674 ATGAAATACAGTGCCAGAAGGA 57.425 40.909 0.00 0.00 36.89 3.36
12 13 4.460382 ACAATGAAATACAGTGCCAGAAGG 59.540 41.667 0.00 0.00 46.68 3.46
13 14 5.633830 ACAATGAAATACAGTGCCAGAAG 57.366 39.130 0.00 0.00 46.68 2.85
14 15 7.701539 ATTACAATGAAATACAGTGCCAGAA 57.298 32.000 0.00 0.00 46.68 3.02
15 16 7.176515 ACAATTACAATGAAATACAGTGCCAGA 59.823 33.333 0.00 0.00 46.68 3.86
16 17 7.315142 ACAATTACAATGAAATACAGTGCCAG 58.685 34.615 0.00 0.00 46.68 4.85
17 18 7.225784 ACAATTACAATGAAATACAGTGCCA 57.774 32.000 0.00 0.00 46.68 4.92
18 19 8.532977 AAACAATTACAATGAAATACAGTGCC 57.467 30.769 0.00 0.00 46.68 5.01
19 20 9.796062 CAAAACAATTACAATGAAATACAGTGC 57.204 29.630 0.00 0.00 46.68 4.40
21 22 9.762933 AGCAAAACAATTACAATGAAATACAGT 57.237 25.926 0.00 0.00 0.00 3.55
23 24 9.755804 TGAGCAAAACAATTACAATGAAATACA 57.244 25.926 0.00 0.00 0.00 2.29
25 26 9.979578 AGTGAGCAAAACAATTACAATGAAATA 57.020 25.926 0.00 0.00 0.00 1.40
26 27 8.891671 AGTGAGCAAAACAATTACAATGAAAT 57.108 26.923 0.00 0.00 0.00 2.17
27 28 8.602328 CAAGTGAGCAAAACAATTACAATGAAA 58.398 29.630 0.00 0.00 0.00 2.69
28 29 7.763528 ACAAGTGAGCAAAACAATTACAATGAA 59.236 29.630 0.00 0.00 0.00 2.57
29 30 7.222417 CACAAGTGAGCAAAACAATTACAATGA 59.778 33.333 0.00 0.00 0.00 2.57
30 31 7.010367 ACACAAGTGAGCAAAACAATTACAATG 59.990 33.333 7.28 0.00 0.00 2.82
31 32 7.041107 ACACAAGTGAGCAAAACAATTACAAT 58.959 30.769 7.28 0.00 0.00 2.71
32 33 6.393990 ACACAAGTGAGCAAAACAATTACAA 58.606 32.000 7.28 0.00 0.00 2.41
33 34 5.960113 ACACAAGTGAGCAAAACAATTACA 58.040 33.333 7.28 0.00 0.00 2.41
49 50 5.242434 TCTGTTGTTTACTCACACACAAGT 58.758 37.500 0.00 0.00 29.85 3.16
50 51 5.794687 TCTGTTGTTTACTCACACACAAG 57.205 39.130 0.00 0.00 29.85 3.16
51 52 6.550843 CATTCTGTTGTTTACTCACACACAA 58.449 36.000 0.00 0.00 0.00 3.33
52 53 5.448496 GCATTCTGTTGTTTACTCACACACA 60.448 40.000 0.00 0.00 0.00 3.72
53 54 4.970003 GCATTCTGTTGTTTACTCACACAC 59.030 41.667 0.00 0.00 0.00 3.82
54 55 4.881273 AGCATTCTGTTGTTTACTCACACA 59.119 37.500 0.00 0.00 0.00 3.72
55 56 5.424121 AGCATTCTGTTGTTTACTCACAC 57.576 39.130 0.00 0.00 0.00 3.82
56 57 5.221028 CCAAGCATTCTGTTGTTTACTCACA 60.221 40.000 0.00 0.00 0.00 3.58
57 58 5.215160 CCAAGCATTCTGTTGTTTACTCAC 58.785 41.667 0.00 0.00 0.00 3.51
58 59 4.261572 GCCAAGCATTCTGTTGTTTACTCA 60.262 41.667 0.00 0.00 0.00 3.41
59 60 4.022849 AGCCAAGCATTCTGTTGTTTACTC 60.023 41.667 0.00 0.00 0.00 2.59
60 61 3.891366 AGCCAAGCATTCTGTTGTTTACT 59.109 39.130 0.00 0.00 0.00 2.24
61 62 4.243007 AGCCAAGCATTCTGTTGTTTAC 57.757 40.909 0.00 0.00 0.00 2.01
62 63 4.935352 AAGCCAAGCATTCTGTTGTTTA 57.065 36.364 0.00 0.00 0.00 2.01
63 64 3.825143 AAGCCAAGCATTCTGTTGTTT 57.175 38.095 0.00 0.00 0.00 2.83
64 65 4.342092 AGTTAAGCCAAGCATTCTGTTGTT 59.658 37.500 0.00 0.00 0.00 2.83
65 66 3.891366 AGTTAAGCCAAGCATTCTGTTGT 59.109 39.130 0.00 0.00 0.00 3.32
66 67 4.510038 AGTTAAGCCAAGCATTCTGTTG 57.490 40.909 0.00 0.00 0.00 3.33
67 68 5.412904 GTCTAGTTAAGCCAAGCATTCTGTT 59.587 40.000 0.00 0.00 0.00 3.16
68 69 4.938226 GTCTAGTTAAGCCAAGCATTCTGT 59.062 41.667 0.00 0.00 0.00 3.41
69 70 4.937620 TGTCTAGTTAAGCCAAGCATTCTG 59.062 41.667 0.00 0.00 0.00 3.02
70 71 4.938226 GTGTCTAGTTAAGCCAAGCATTCT 59.062 41.667 0.00 0.00 0.00 2.40
71 72 4.095036 GGTGTCTAGTTAAGCCAAGCATTC 59.905 45.833 0.00 0.00 0.00 2.67
72 73 4.010349 GGTGTCTAGTTAAGCCAAGCATT 58.990 43.478 0.00 0.00 0.00 3.56
73 74 3.610911 GGTGTCTAGTTAAGCCAAGCAT 58.389 45.455 0.00 0.00 0.00 3.79
74 75 2.611971 CGGTGTCTAGTTAAGCCAAGCA 60.612 50.000 0.00 0.00 0.00 3.91
75 76 2.000447 CGGTGTCTAGTTAAGCCAAGC 59.000 52.381 0.00 0.00 0.00 4.01
76 77 2.232941 TCCGGTGTCTAGTTAAGCCAAG 59.767 50.000 0.00 0.00 0.00 3.61
77 78 2.250031 TCCGGTGTCTAGTTAAGCCAA 58.750 47.619 0.00 0.00 0.00 4.52
78 79 1.927487 TCCGGTGTCTAGTTAAGCCA 58.073 50.000 0.00 0.00 0.00 4.75
79 80 3.538634 AATCCGGTGTCTAGTTAAGCC 57.461 47.619 0.00 0.00 0.00 4.35
80 81 3.869832 GGAAATCCGGTGTCTAGTTAAGC 59.130 47.826 0.00 0.00 0.00 3.09
81 82 5.080969 TGGAAATCCGGTGTCTAGTTAAG 57.919 43.478 0.00 0.00 39.43 1.85
82 83 5.687166 ATGGAAATCCGGTGTCTAGTTAA 57.313 39.130 0.00 0.00 39.43 2.01
83 84 5.046159 ACAATGGAAATCCGGTGTCTAGTTA 60.046 40.000 0.00 0.00 39.43 2.24
84 85 4.261801 CAATGGAAATCCGGTGTCTAGTT 58.738 43.478 0.00 0.00 39.43 2.24
85 86 3.263425 ACAATGGAAATCCGGTGTCTAGT 59.737 43.478 0.00 0.00 39.43 2.57
86 87 3.873910 ACAATGGAAATCCGGTGTCTAG 58.126 45.455 0.00 0.00 39.43 2.43
87 88 3.992943 ACAATGGAAATCCGGTGTCTA 57.007 42.857 0.00 0.00 39.43 2.59
88 89 2.879103 ACAATGGAAATCCGGTGTCT 57.121 45.000 0.00 0.00 39.43 3.41
89 90 5.576447 ATTTACAATGGAAATCCGGTGTC 57.424 39.130 0.00 0.00 37.04 3.67
90 91 5.993748 AATTTACAATGGAAATCCGGTGT 57.006 34.783 3.61 11.27 38.60 4.16
91 92 7.602265 AGAAAAATTTACAATGGAAATCCGGTG 59.398 33.333 3.61 0.00 39.43 4.94
92 93 7.602265 CAGAAAAATTTACAATGGAAATCCGGT 59.398 33.333 3.61 0.00 39.43 5.28
93 94 7.064490 CCAGAAAAATTTACAATGGAAATCCGG 59.936 37.037 3.61 0.00 39.43 5.14
94 95 7.602265 ACCAGAAAAATTTACAATGGAAATCCG 59.398 33.333 3.61 0.00 39.43 4.18
95 96 8.846943 ACCAGAAAAATTTACAATGGAAATCC 57.153 30.769 3.61 0.00 0.00 3.01
96 97 9.710900 AGACCAGAAAAATTTACAATGGAAATC 57.289 29.630 3.61 0.00 0.00 2.17
120 121 9.352784 CGCACCATTTGAAAAGATAAATTTAGA 57.647 29.630 3.94 0.00 0.00 2.10
121 122 8.110002 GCGCACCATTTGAAAAGATAAATTTAG 58.890 33.333 0.30 0.00 0.00 1.85
122 123 7.201393 CGCGCACCATTTGAAAAGATAAATTTA 60.201 33.333 8.75 0.00 0.00 1.40
123 124 6.400940 CGCGCACCATTTGAAAAGATAAATTT 60.401 34.615 8.75 0.00 0.00 1.82
124 125 5.062058 CGCGCACCATTTGAAAAGATAAATT 59.938 36.000 8.75 0.00 0.00 1.82
125 126 4.562394 CGCGCACCATTTGAAAAGATAAAT 59.438 37.500 8.75 0.00 0.00 1.40
126 127 3.917380 CGCGCACCATTTGAAAAGATAAA 59.083 39.130 8.75 0.00 0.00 1.40
127 128 3.189495 TCGCGCACCATTTGAAAAGATAA 59.811 39.130 8.75 0.00 0.00 1.75
128 129 2.744741 TCGCGCACCATTTGAAAAGATA 59.255 40.909 8.75 0.00 0.00 1.98
129 130 1.539388 TCGCGCACCATTTGAAAAGAT 59.461 42.857 8.75 0.00 0.00 2.40
130 131 0.947960 TCGCGCACCATTTGAAAAGA 59.052 45.000 8.75 0.00 0.00 2.52
131 132 1.052287 GTCGCGCACCATTTGAAAAG 58.948 50.000 8.75 0.00 0.00 2.27
132 133 0.382158 TGTCGCGCACCATTTGAAAA 59.618 45.000 8.75 0.00 0.00 2.29
133 134 0.595588 ATGTCGCGCACCATTTGAAA 59.404 45.000 8.75 0.00 0.00 2.69
134 135 0.109827 CATGTCGCGCACCATTTGAA 60.110 50.000 8.75 0.00 0.00 2.69
135 136 1.501292 CATGTCGCGCACCATTTGA 59.499 52.632 8.75 0.00 0.00 2.69
136 137 1.514657 CCATGTCGCGCACCATTTG 60.515 57.895 8.75 0.00 0.00 2.32
137 138 1.647545 CTCCATGTCGCGCACCATTT 61.648 55.000 8.75 0.00 0.00 2.32
138 139 2.046411 TCCATGTCGCGCACCATT 60.046 55.556 8.75 0.00 0.00 3.16
139 140 2.512286 CTCCATGTCGCGCACCAT 60.512 61.111 8.75 5.47 0.00 3.55
142 143 4.152625 GTGCTCCATGTCGCGCAC 62.153 66.667 8.75 5.56 44.73 5.34
145 146 2.842394 AAGAGGTGCTCCATGTCGCG 62.842 60.000 7.70 0.00 35.89 5.87
146 147 0.674895 AAAGAGGTGCTCCATGTCGC 60.675 55.000 7.70 0.00 35.89 5.19
147 148 1.081892 CAAAGAGGTGCTCCATGTCG 58.918 55.000 7.70 0.00 35.89 4.35
148 149 1.457346 CCAAAGAGGTGCTCCATGTC 58.543 55.000 7.70 0.00 35.89 3.06
149 150 0.038744 CCCAAAGAGGTGCTCCATGT 59.961 55.000 7.70 0.00 35.89 3.21
150 151 0.682209 CCCCAAAGAGGTGCTCCATG 60.682 60.000 7.70 0.74 35.89 3.66
151 152 0.846427 TCCCCAAAGAGGTGCTCCAT 60.846 55.000 7.70 0.00 35.89 3.41
152 153 1.463214 TCCCCAAAGAGGTGCTCCA 60.463 57.895 7.70 0.00 35.89 3.86
153 154 1.002011 GTCCCCAAAGAGGTGCTCC 60.002 63.158 0.00 0.00 34.66 4.70
154 155 1.376037 CGTCCCCAAAGAGGTGCTC 60.376 63.158 0.00 0.00 34.66 4.26
155 156 2.147387 ACGTCCCCAAAGAGGTGCT 61.147 57.895 0.00 0.00 33.79 4.40
156 157 1.966451 CACGTCCCCAAAGAGGTGC 60.966 63.158 1.93 0.00 43.33 5.01
157 158 4.379174 CACGTCCCCAAAGAGGTG 57.621 61.111 0.61 0.61 43.70 4.00
158 159 2.430367 GCACGTCCCCAAAGAGGT 59.570 61.111 0.00 0.00 35.33 3.85
159 160 2.359975 GGCACGTCCCCAAAGAGG 60.360 66.667 0.00 0.00 37.03 3.69
172 173 0.108992 TACACGATTCCTCACGGCAC 60.109 55.000 0.00 0.00 0.00 5.01
173 174 0.821517 ATACACGATTCCTCACGGCA 59.178 50.000 0.00 0.00 0.00 5.69
174 175 1.935933 AATACACGATTCCTCACGGC 58.064 50.000 0.00 0.00 0.00 5.68
175 176 3.050619 GCTAATACACGATTCCTCACGG 58.949 50.000 0.00 0.00 0.00 4.94
176 177 3.966154 AGCTAATACACGATTCCTCACG 58.034 45.455 0.00 0.00 0.00 4.35
177 178 6.736123 TCTAAGCTAATACACGATTCCTCAC 58.264 40.000 0.00 0.00 0.00 3.51
178 179 6.954487 TCTAAGCTAATACACGATTCCTCA 57.046 37.500 0.00 0.00 0.00 3.86
179 180 7.148722 GCAATCTAAGCTAATACACGATTCCTC 60.149 40.741 0.00 0.00 0.00 3.71
180 181 6.647067 GCAATCTAAGCTAATACACGATTCCT 59.353 38.462 0.00 0.00 0.00 3.36
181 182 6.647067 AGCAATCTAAGCTAATACACGATTCC 59.353 38.462 0.00 0.00 41.32 3.01
182 183 7.644986 AGCAATCTAAGCTAATACACGATTC 57.355 36.000 0.00 0.00 41.32 2.52
183 184 8.577296 TCTAGCAATCTAAGCTAATACACGATT 58.423 33.333 0.00 0.00 43.39 3.34
184 185 8.112016 TCTAGCAATCTAAGCTAATACACGAT 57.888 34.615 0.00 0.00 43.39 3.73
185 186 7.228906 ACTCTAGCAATCTAAGCTAATACACGA 59.771 37.037 0.00 0.00 43.39 4.35
186 187 7.364200 ACTCTAGCAATCTAAGCTAATACACG 58.636 38.462 0.00 0.00 43.39 4.49
187 188 9.834628 CTACTCTAGCAATCTAAGCTAATACAC 57.165 37.037 0.00 0.00 43.39 2.90
188 189 9.015367 CCTACTCTAGCAATCTAAGCTAATACA 57.985 37.037 0.00 0.00 43.39 2.29
189 190 9.233649 TCCTACTCTAGCAATCTAAGCTAATAC 57.766 37.037 0.00 0.00 43.39 1.89
190 191 9.809395 TTCCTACTCTAGCAATCTAAGCTAATA 57.191 33.333 0.00 0.00 43.39 0.98
191 192 8.713708 TTCCTACTCTAGCAATCTAAGCTAAT 57.286 34.615 0.00 0.00 43.39 1.73
192 193 7.780745 ACTTCCTACTCTAGCAATCTAAGCTAA 59.219 37.037 0.00 0.00 43.39 3.09
193 194 7.291566 ACTTCCTACTCTAGCAATCTAAGCTA 58.708 38.462 0.00 0.00 43.25 3.32
194 195 6.133356 ACTTCCTACTCTAGCAATCTAAGCT 58.867 40.000 0.00 0.00 45.77 3.74
195 196 6.399639 ACTTCCTACTCTAGCAATCTAAGC 57.600 41.667 0.00 0.00 0.00 3.09
196 197 6.015772 GGGACTTCCTACTCTAGCAATCTAAG 60.016 46.154 0.00 0.00 35.95 2.18
197 198 5.834204 GGGACTTCCTACTCTAGCAATCTAA 59.166 44.000 0.00 0.00 35.95 2.10
198 199 5.134679 AGGGACTTCCTACTCTAGCAATCTA 59.865 44.000 0.00 0.00 45.98 1.98
199 200 4.078863 AGGGACTTCCTACTCTAGCAATCT 60.079 45.833 0.00 0.00 45.98 2.40
200 201 4.219919 AGGGACTTCCTACTCTAGCAATC 58.780 47.826 0.00 0.00 45.98 2.67
201 202 4.273300 AGGGACTTCCTACTCTAGCAAT 57.727 45.455 0.00 0.00 45.98 3.56
202 203 3.759815 AGGGACTTCCTACTCTAGCAA 57.240 47.619 0.00 0.00 45.98 3.91
213 214 0.179034 CAGCCAGCATAGGGACTTCC 60.179 60.000 0.00 0.00 41.75 3.46
214 215 0.543749 ACAGCCAGCATAGGGACTTC 59.456 55.000 0.00 0.00 41.75 3.01
215 216 1.879575 TACAGCCAGCATAGGGACTT 58.120 50.000 0.00 0.00 41.75 3.01
216 217 2.109229 ATACAGCCAGCATAGGGACT 57.891 50.000 0.00 0.00 46.37 3.85
217 218 2.938956 AATACAGCCAGCATAGGGAC 57.061 50.000 0.00 0.00 0.00 4.46
218 219 3.048600 AGAAATACAGCCAGCATAGGGA 58.951 45.455 0.00 0.00 0.00 4.20
219 220 3.181451 TGAGAAATACAGCCAGCATAGGG 60.181 47.826 0.00 0.00 0.00 3.53
220 221 4.077300 TGAGAAATACAGCCAGCATAGG 57.923 45.455 0.00 0.00 0.00 2.57
221 222 6.630444 ATTTGAGAAATACAGCCAGCATAG 57.370 37.500 0.00 0.00 0.00 2.23
222 223 6.830324 AGAATTTGAGAAATACAGCCAGCATA 59.170 34.615 0.00 0.00 0.00 3.14
223 224 5.655532 AGAATTTGAGAAATACAGCCAGCAT 59.344 36.000 0.00 0.00 0.00 3.79
224 225 5.012239 AGAATTTGAGAAATACAGCCAGCA 58.988 37.500 0.00 0.00 0.00 4.41
225 226 5.573337 AGAATTTGAGAAATACAGCCAGC 57.427 39.130 0.00 0.00 0.00 4.85
226 227 7.540055 GTGAAAGAATTTGAGAAATACAGCCAG 59.460 37.037 0.00 0.00 39.27 4.85
227 228 7.370383 GTGAAAGAATTTGAGAAATACAGCCA 58.630 34.615 0.00 0.00 39.27 4.75
228 229 6.808704 GGTGAAAGAATTTGAGAAATACAGCC 59.191 38.462 0.00 0.00 39.27 4.85
229 230 6.808704 GGGTGAAAGAATTTGAGAAATACAGC 59.191 38.462 0.00 0.00 39.27 4.40
230 231 7.177392 AGGGGTGAAAGAATTTGAGAAATACAG 59.823 37.037 0.00 0.00 39.27 2.74
231 232 7.010160 AGGGGTGAAAGAATTTGAGAAATACA 58.990 34.615 0.00 0.00 39.27 2.29
232 233 7.176690 TCAGGGGTGAAAGAATTTGAGAAATAC 59.823 37.037 0.00 0.00 39.27 1.89
233 234 7.237982 TCAGGGGTGAAAGAATTTGAGAAATA 58.762 34.615 0.00 0.00 39.27 1.40
234 235 6.077322 TCAGGGGTGAAAGAATTTGAGAAAT 58.923 36.000 0.00 0.00 39.27 2.17
235 236 5.454062 TCAGGGGTGAAAGAATTTGAGAAA 58.546 37.500 0.00 0.00 39.27 2.52
236 237 5.060427 TCAGGGGTGAAAGAATTTGAGAA 57.940 39.130 0.00 0.00 39.27 2.87
237 238 4.722526 TCAGGGGTGAAAGAATTTGAGA 57.277 40.909 0.00 0.00 39.27 3.27
238 239 5.012239 TGATCAGGGGTGAAAGAATTTGAG 58.988 41.667 0.00 0.00 39.27 3.02
239 240 4.766891 GTGATCAGGGGTGAAAGAATTTGA 59.233 41.667 0.00 0.00 39.27 2.69
240 241 4.082026 GGTGATCAGGGGTGAAAGAATTTG 60.082 45.833 0.00 0.00 39.27 2.32
241 242 4.089361 GGTGATCAGGGGTGAAAGAATTT 58.911 43.478 0.00 0.00 43.98 1.82
242 243 3.075882 TGGTGATCAGGGGTGAAAGAATT 59.924 43.478 0.00 0.00 0.00 2.17
243 244 2.649312 TGGTGATCAGGGGTGAAAGAAT 59.351 45.455 0.00 0.00 0.00 2.40
244 245 2.061848 TGGTGATCAGGGGTGAAAGAA 58.938 47.619 0.00 0.00 0.00 2.52
245 246 1.741028 TGGTGATCAGGGGTGAAAGA 58.259 50.000 0.00 0.00 0.00 2.52
246 247 2.025981 TGATGGTGATCAGGGGTGAAAG 60.026 50.000 0.00 0.00 33.40 2.62
247 248 1.991813 TGATGGTGATCAGGGGTGAAA 59.008 47.619 0.00 0.00 33.40 2.69
248 249 1.667595 TGATGGTGATCAGGGGTGAA 58.332 50.000 0.00 0.00 33.40 3.18
249 250 1.281867 GTTGATGGTGATCAGGGGTGA 59.718 52.381 0.00 0.00 39.81 4.02
250 251 1.004628 TGTTGATGGTGATCAGGGGTG 59.995 52.381 0.00 0.00 39.81 4.61
251 252 1.004745 GTGTTGATGGTGATCAGGGGT 59.995 52.381 0.00 0.00 39.81 4.95
252 253 1.283029 AGTGTTGATGGTGATCAGGGG 59.717 52.381 0.00 0.00 39.81 4.79
253 254 2.751259 CAAGTGTTGATGGTGATCAGGG 59.249 50.000 0.00 0.00 39.81 4.45
254 255 3.415212 ACAAGTGTTGATGGTGATCAGG 58.585 45.455 0.00 0.00 39.81 3.86
255 256 5.443185 AAACAAGTGTTGATGGTGATCAG 57.557 39.130 0.00 0.00 39.81 2.90
256 257 5.593909 AGAAAACAAGTGTTGATGGTGATCA 59.406 36.000 0.00 0.00 38.44 2.92
257 258 5.916883 CAGAAAACAAGTGTTGATGGTGATC 59.083 40.000 0.00 0.00 38.44 2.92
258 259 5.737063 GCAGAAAACAAGTGTTGATGGTGAT 60.737 40.000 0.00 0.00 38.44 3.06
259 260 4.439974 GCAGAAAACAAGTGTTGATGGTGA 60.440 41.667 0.00 0.00 38.44 4.02
260 261 3.798337 GCAGAAAACAAGTGTTGATGGTG 59.202 43.478 0.00 0.00 38.44 4.17
261 262 3.181476 GGCAGAAAACAAGTGTTGATGGT 60.181 43.478 0.00 0.00 38.44 3.55
262 263 3.068590 AGGCAGAAAACAAGTGTTGATGG 59.931 43.478 0.00 0.00 38.44 3.51
263 264 4.311816 AGGCAGAAAACAAGTGTTGATG 57.688 40.909 0.00 0.00 38.44 3.07
264 265 4.646492 AGAAGGCAGAAAACAAGTGTTGAT 59.354 37.500 0.00 0.00 38.44 2.57
265 266 4.016444 AGAAGGCAGAAAACAAGTGTTGA 58.984 39.130 0.00 0.00 38.44 3.18
266 267 4.376340 AGAAGGCAGAAAACAAGTGTTG 57.624 40.909 0.00 0.00 38.44 3.33
267 268 6.016777 CAGATAGAAGGCAGAAAACAAGTGTT 60.017 38.462 0.00 0.00 40.50 3.32
268 269 5.471456 CAGATAGAAGGCAGAAAACAAGTGT 59.529 40.000 0.00 0.00 0.00 3.55
269 270 5.618640 GCAGATAGAAGGCAGAAAACAAGTG 60.619 44.000 0.00 0.00 0.00 3.16
270 271 4.457257 GCAGATAGAAGGCAGAAAACAAGT 59.543 41.667 0.00 0.00 0.00 3.16
271 272 4.699257 AGCAGATAGAAGGCAGAAAACAAG 59.301 41.667 0.00 0.00 0.00 3.16
272 273 4.655963 AGCAGATAGAAGGCAGAAAACAA 58.344 39.130 0.00 0.00 0.00 2.83
273 274 4.292186 AGCAGATAGAAGGCAGAAAACA 57.708 40.909 0.00 0.00 0.00 2.83
274 275 6.540189 TCATTAGCAGATAGAAGGCAGAAAAC 59.460 38.462 0.00 0.00 0.00 2.43
275 276 6.653020 TCATTAGCAGATAGAAGGCAGAAAA 58.347 36.000 0.00 0.00 0.00 2.29
276 277 6.239217 TCATTAGCAGATAGAAGGCAGAAA 57.761 37.500 0.00 0.00 0.00 2.52
277 278 5.876651 TCATTAGCAGATAGAAGGCAGAA 57.123 39.130 0.00 0.00 0.00 3.02
278 279 5.876651 TTCATTAGCAGATAGAAGGCAGA 57.123 39.130 0.00 0.00 0.00 4.26
279 280 6.709397 TCATTTCATTAGCAGATAGAAGGCAG 59.291 38.462 0.00 0.00 0.00 4.85
280 281 6.594744 TCATTTCATTAGCAGATAGAAGGCA 58.405 36.000 0.00 0.00 0.00 4.75
281 282 6.709846 ACTCATTTCATTAGCAGATAGAAGGC 59.290 38.462 0.00 0.00 0.00 4.35
282 283 7.714377 ACACTCATTTCATTAGCAGATAGAAGG 59.286 37.037 0.00 0.00 0.00 3.46
283 284 8.659925 ACACTCATTTCATTAGCAGATAGAAG 57.340 34.615 0.00 0.00 0.00 2.85
284 285 8.260114 TGACACTCATTTCATTAGCAGATAGAA 58.740 33.333 0.00 0.00 0.00 2.10
285 286 7.785033 TGACACTCATTTCATTAGCAGATAGA 58.215 34.615 0.00 0.00 0.00 1.98
286 287 7.307278 GCTGACACTCATTTCATTAGCAGATAG 60.307 40.741 0.00 0.00 0.00 2.08
287 288 6.481313 GCTGACACTCATTTCATTAGCAGATA 59.519 38.462 0.00 0.00 0.00 1.98
288 289 5.296283 GCTGACACTCATTTCATTAGCAGAT 59.704 40.000 0.00 0.00 0.00 2.90
289 290 4.633126 GCTGACACTCATTTCATTAGCAGA 59.367 41.667 0.00 0.00 0.00 4.26
290 291 4.393990 TGCTGACACTCATTTCATTAGCAG 59.606 41.667 0.00 0.00 34.14 4.24
291 292 4.154737 GTGCTGACACTCATTTCATTAGCA 59.845 41.667 0.00 0.00 43.85 3.49
292 293 4.656041 GTGCTGACACTCATTTCATTAGC 58.344 43.478 0.00 0.00 43.85 3.09
310 311 4.261909 CTTTTGAAAGATCCAGCTTGTGCT 60.262 41.667 0.00 0.00 43.69 4.40
311 312 3.648339 TTTGAAAGATCCAGCTTGTGC 57.352 42.857 0.00 0.00 40.05 4.57
312 313 5.443185 TCTTTTGAAAGATCCAGCTTGTG 57.557 39.130 2.16 0.00 39.95 3.33
313 314 6.469782 TTTCTTTTGAAAGATCCAGCTTGT 57.530 33.333 6.98 0.00 43.92 3.16
325 326 5.501574 CGCGCCATTTTCTTTTCTTTTGAAA 60.502 36.000 0.00 0.00 45.65 2.69
326 327 4.026145 CGCGCCATTTTCTTTTCTTTTGAA 60.026 37.500 0.00 0.00 36.52 2.69
327 328 3.489047 CGCGCCATTTTCTTTTCTTTTGA 59.511 39.130 0.00 0.00 0.00 2.69
328 329 3.786712 CGCGCCATTTTCTTTTCTTTTG 58.213 40.909 0.00 0.00 0.00 2.44
329 330 2.220824 GCGCGCCATTTTCTTTTCTTTT 59.779 40.909 23.24 0.00 0.00 2.27
330 331 1.792367 GCGCGCCATTTTCTTTTCTTT 59.208 42.857 23.24 0.00 0.00 2.52
331 332 1.418373 GCGCGCCATTTTCTTTTCTT 58.582 45.000 23.24 0.00 0.00 2.52
332 333 0.729140 CGCGCGCCATTTTCTTTTCT 60.729 50.000 27.72 0.00 0.00 2.52
333 334 0.727793 TCGCGCGCCATTTTCTTTTC 60.728 50.000 27.95 0.00 0.00 2.29
334 335 1.001745 GTCGCGCGCCATTTTCTTTT 61.002 50.000 27.95 0.00 0.00 2.27
335 336 1.442017 GTCGCGCGCCATTTTCTTT 60.442 52.632 27.95 0.00 0.00 2.52
336 337 1.017177 TAGTCGCGCGCCATTTTCTT 61.017 50.000 27.95 0.00 0.00 2.52
337 338 1.447140 TAGTCGCGCGCCATTTTCT 60.447 52.632 27.95 16.06 0.00 2.52
338 339 1.296649 GTAGTCGCGCGCCATTTTC 60.297 57.895 27.95 8.29 0.00 2.29
339 340 1.366111 ATGTAGTCGCGCGCCATTTT 61.366 50.000 27.95 9.48 0.00 1.82
347 348 2.320367 CTGAAGGATATGTAGTCGCGC 58.680 52.381 0.00 0.00 0.00 6.86
351 352 2.891580 TCGGCCTGAAGGATATGTAGTC 59.108 50.000 0.00 0.00 37.39 2.59
355 356 0.759346 GGTCGGCCTGAAGGATATGT 59.241 55.000 0.00 0.00 37.39 2.29
381 382 1.535204 ATGCAACTTTCGCCCCCTTG 61.535 55.000 0.00 0.00 0.00 3.61
386 387 2.147436 TCAAAATGCAACTTTCGCCC 57.853 45.000 0.00 0.00 0.00 6.13
387 388 2.863137 TGTTCAAAATGCAACTTTCGCC 59.137 40.909 0.00 0.00 0.00 5.54
395 396 3.446799 GCTCAGTGTGTTCAAAATGCAA 58.553 40.909 0.00 0.00 0.00 4.08
404 405 0.598680 AGTCTGCGCTCAGTGTGTTC 60.599 55.000 9.73 0.00 41.10 3.18
409 410 2.125753 GGGAGTCTGCGCTCAGTG 60.126 66.667 9.73 0.00 41.10 3.66
417 418 1.000938 CACTTTTTGCTGGGAGTCTGC 60.001 52.381 0.00 0.00 40.23 4.26
451 741 2.486191 GGCAGTCTTATGATGGGGTCTG 60.486 54.545 0.00 0.00 0.00 3.51
455 745 0.250467 CGGGCAGTCTTATGATGGGG 60.250 60.000 0.00 0.00 0.00 4.96
456 746 0.886490 GCGGGCAGTCTTATGATGGG 60.886 60.000 0.00 0.00 0.00 4.00
459 749 0.533755 GCTGCGGGCAGTCTTATGAT 60.534 55.000 20.66 0.00 45.24 2.45
460 750 1.153369 GCTGCGGGCAGTCTTATGA 60.153 57.895 20.66 0.00 45.24 2.15
485 779 2.364186 GCCCCACCCCATTGGAAG 60.364 66.667 3.62 0.00 39.24 3.46
490 784 2.445155 GTTGAGCCCCACCCCATT 59.555 61.111 0.00 0.00 0.00 3.16
500 794 0.451783 CATGCCCTTAACGTTGAGCC 59.548 55.000 14.25 8.03 0.00 4.70
507 801 5.212194 GCATAATTGTACATGCCCTTAACG 58.788 41.667 7.77 0.00 41.36 3.18
515 809 8.777865 TCCTAAGATAGCATAATTGTACATGC 57.222 34.615 10.53 10.53 46.35 4.06
516 810 8.877779 GCTCCTAAGATAGCATAATTGTACATG 58.122 37.037 0.00 0.00 38.63 3.21
517 811 7.761704 CGCTCCTAAGATAGCATAATTGTACAT 59.238 37.037 0.00 0.00 38.70 2.29
518 812 7.090808 CGCTCCTAAGATAGCATAATTGTACA 58.909 38.462 0.00 0.00 38.70 2.90
519 813 6.531948 CCGCTCCTAAGATAGCATAATTGTAC 59.468 42.308 0.00 0.00 38.70 2.90
520 814 6.351033 CCCGCTCCTAAGATAGCATAATTGTA 60.351 42.308 0.00 0.00 38.70 2.41
521 815 5.482908 CCGCTCCTAAGATAGCATAATTGT 58.517 41.667 0.00 0.00 38.70 2.71
522 816 4.872691 CCCGCTCCTAAGATAGCATAATTG 59.127 45.833 0.00 0.00 38.70 2.32
523 817 4.624125 GCCCGCTCCTAAGATAGCATAATT 60.624 45.833 0.00 0.00 38.70 1.40
524 818 3.118592 GCCCGCTCCTAAGATAGCATAAT 60.119 47.826 0.00 0.00 38.70 1.28
525 819 2.233922 GCCCGCTCCTAAGATAGCATAA 59.766 50.000 0.00 0.00 38.70 1.90
526 820 1.825474 GCCCGCTCCTAAGATAGCATA 59.175 52.381 0.00 0.00 38.70 3.14
527 821 0.610687 GCCCGCTCCTAAGATAGCAT 59.389 55.000 0.00 0.00 38.70 3.79
528 822 0.759060 TGCCCGCTCCTAAGATAGCA 60.759 55.000 0.00 0.00 38.70 3.49
529 823 0.610687 ATGCCCGCTCCTAAGATAGC 59.389 55.000 0.00 0.00 35.33 2.97
530 824 1.620819 ACATGCCCGCTCCTAAGATAG 59.379 52.381 0.00 0.00 0.00 2.08
531 825 1.717032 ACATGCCCGCTCCTAAGATA 58.283 50.000 0.00 0.00 0.00 1.98
532 826 1.620819 CTACATGCCCGCTCCTAAGAT 59.379 52.381 0.00 0.00 0.00 2.40
533 827 1.040646 CTACATGCCCGCTCCTAAGA 58.959 55.000 0.00 0.00 0.00 2.10
534 828 0.034059 CCTACATGCCCGCTCCTAAG 59.966 60.000 0.00 0.00 0.00 2.18
535 829 0.397957 TCCTACATGCCCGCTCCTAA 60.398 55.000 0.00 0.00 0.00 2.69
536 830 0.178932 ATCCTACATGCCCGCTCCTA 60.179 55.000 0.00 0.00 0.00 2.94
537 831 0.178932 TATCCTACATGCCCGCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
538 832 0.685097 TTATCCTACATGCCCGCTCC 59.315 55.000 0.00 0.00 0.00 4.70
539 833 2.543777 TTTATCCTACATGCCCGCTC 57.456 50.000 0.00 0.00 0.00 5.03
540 834 2.106511 ACATTTATCCTACATGCCCGCT 59.893 45.455 0.00 0.00 0.00 5.52
541 835 2.504367 ACATTTATCCTACATGCCCGC 58.496 47.619 0.00 0.00 0.00 6.13
542 836 5.181245 CCTTAACATTTATCCTACATGCCCG 59.819 44.000 0.00 0.00 0.00 6.13
543 837 6.068670 ACCTTAACATTTATCCTACATGCCC 58.931 40.000 0.00 0.00 0.00 5.36
544 838 8.154856 TCTACCTTAACATTTATCCTACATGCC 58.845 37.037 0.00 0.00 0.00 4.40
545 839 9.209175 CTCTACCTTAACATTTATCCTACATGC 57.791 37.037 0.00 0.00 0.00 4.06
546 840 9.712305 CCTCTACCTTAACATTTATCCTACATG 57.288 37.037 0.00 0.00 0.00 3.21
547 841 9.670442 TCCTCTACCTTAACATTTATCCTACAT 57.330 33.333 0.00 0.00 0.00 2.29
548 842 9.496710 TTCCTCTACCTTAACATTTATCCTACA 57.503 33.333 0.00 0.00 0.00 2.74
551 845 9.280456 TCTTTCCTCTACCTTAACATTTATCCT 57.720 33.333 0.00 0.00 0.00 3.24
552 846 9.549078 CTCTTTCCTCTACCTTAACATTTATCC 57.451 37.037 0.00 0.00 0.00 2.59
558 852 9.268282 TGATTACTCTTTCCTCTACCTTAACAT 57.732 33.333 0.00 0.00 0.00 2.71
559 853 8.660295 TGATTACTCTTTCCTCTACCTTAACA 57.340 34.615 0.00 0.00 0.00 2.41
591 885 9.838339 TCTTTGAAATAAGAGAAGACAAGACTT 57.162 29.630 0.00 0.00 30.87 3.01
682 976 5.233988 GTGCTACAATGGGCTATCTCTTAG 58.766 45.833 2.71 0.00 0.00 2.18
683 977 4.040461 GGTGCTACAATGGGCTATCTCTTA 59.960 45.833 2.71 0.00 0.00 2.10
684 978 3.181450 GGTGCTACAATGGGCTATCTCTT 60.181 47.826 2.71 0.00 0.00 2.85
685 979 2.370189 GGTGCTACAATGGGCTATCTCT 59.630 50.000 2.71 0.00 0.00 3.10
686 980 2.104792 TGGTGCTACAATGGGCTATCTC 59.895 50.000 2.71 0.00 0.00 2.75
687 981 2.126882 TGGTGCTACAATGGGCTATCT 58.873 47.619 2.71 0.00 0.00 1.98
688 982 2.638480 TGGTGCTACAATGGGCTATC 57.362 50.000 2.71 0.00 0.00 2.08
689 983 2.713167 AGATGGTGCTACAATGGGCTAT 59.287 45.455 2.71 0.00 0.00 2.97
690 984 2.126882 AGATGGTGCTACAATGGGCTA 58.873 47.619 2.71 0.00 0.00 3.93
691 985 0.921896 AGATGGTGCTACAATGGGCT 59.078 50.000 2.71 0.00 0.00 5.19
692 986 1.767759 AAGATGGTGCTACAATGGGC 58.232 50.000 0.00 0.00 0.00 5.36
693 987 5.913137 TTTAAAGATGGTGCTACAATGGG 57.087 39.130 0.00 0.00 0.00 4.00
694 988 8.465999 TGTAATTTAAAGATGGTGCTACAATGG 58.534 33.333 0.00 0.00 0.00 3.16
697 991 7.973388 GCATGTAATTTAAAGATGGTGCTACAA 59.027 33.333 0.00 0.00 0.00 2.41
698 992 7.121907 TGCATGTAATTTAAAGATGGTGCTACA 59.878 33.333 14.58 0.00 0.00 2.74
699 993 7.479980 TGCATGTAATTTAAAGATGGTGCTAC 58.520 34.615 14.58 0.00 0.00 3.58
700 994 7.637631 TGCATGTAATTTAAAGATGGTGCTA 57.362 32.000 14.58 3.99 0.00 3.49
701 995 6.528537 TGCATGTAATTTAAAGATGGTGCT 57.471 33.333 14.58 0.00 0.00 4.40
702 996 7.593875 TTTGCATGTAATTTAAAGATGGTGC 57.406 32.000 0.00 9.43 0.00 5.01
703 997 7.463119 CGCTTTGCATGTAATTTAAAGATGGTG 60.463 37.037 0.00 0.00 31.72 4.17
704 998 6.531240 CGCTTTGCATGTAATTTAAAGATGGT 59.469 34.615 0.00 0.00 31.72 3.55
705 999 6.531240 ACGCTTTGCATGTAATTTAAAGATGG 59.469 34.615 0.00 0.00 31.72 3.51
706 1000 7.510428 ACGCTTTGCATGTAATTTAAAGATG 57.490 32.000 0.00 0.00 31.72 2.90
707 1001 9.289303 CTTACGCTTTGCATGTAATTTAAAGAT 57.711 29.630 0.00 0.00 31.72 2.40
708 1002 8.508062 TCTTACGCTTTGCATGTAATTTAAAGA 58.492 29.630 0.00 1.72 31.72 2.52
709 1003 8.667987 TCTTACGCTTTGCATGTAATTTAAAG 57.332 30.769 0.00 0.00 32.67 1.85
712 1006 9.929722 CTTATCTTACGCTTTGCATGTAATTTA 57.070 29.630 0.00 0.00 0.00 1.40
713 1007 8.673711 TCTTATCTTACGCTTTGCATGTAATTT 58.326 29.630 0.00 0.00 0.00 1.82
714 1008 8.208718 TCTTATCTTACGCTTTGCATGTAATT 57.791 30.769 0.00 0.00 0.00 1.40
715 1009 7.786178 TCTTATCTTACGCTTTGCATGTAAT 57.214 32.000 0.00 0.00 0.00 1.89
716 1010 7.603963 TTCTTATCTTACGCTTTGCATGTAA 57.396 32.000 0.00 0.00 0.00 2.41
717 1011 7.279981 ACATTCTTATCTTACGCTTTGCATGTA 59.720 33.333 0.00 0.00 0.00 2.29
718 1012 6.094048 ACATTCTTATCTTACGCTTTGCATGT 59.906 34.615 0.00 0.00 0.00 3.21
719 1013 6.489675 ACATTCTTATCTTACGCTTTGCATG 58.510 36.000 0.00 0.00 0.00 4.06
720 1014 6.540189 AGACATTCTTATCTTACGCTTTGCAT 59.460 34.615 0.00 0.00 0.00 3.96
721 1015 5.874810 AGACATTCTTATCTTACGCTTTGCA 59.125 36.000 0.00 0.00 0.00 4.08
722 1016 6.351327 AGACATTCTTATCTTACGCTTTGC 57.649 37.500 0.00 0.00 0.00 3.68
736 1030 9.896645 ATGTACAGTGATTGATAAGACATTCTT 57.103 29.630 0.33 0.00 40.35 2.52
737 1031 9.322773 CATGTACAGTGATTGATAAGACATTCT 57.677 33.333 0.33 0.00 0.00 2.40
738 1032 8.066595 GCATGTACAGTGATTGATAAGACATTC 58.933 37.037 0.33 0.00 0.00 2.67
739 1033 7.772292 AGCATGTACAGTGATTGATAAGACATT 59.228 33.333 0.33 0.00 0.00 2.71
740 1034 7.278135 AGCATGTACAGTGATTGATAAGACAT 58.722 34.615 0.33 0.00 0.00 3.06
741 1035 6.643388 AGCATGTACAGTGATTGATAAGACA 58.357 36.000 0.33 0.00 0.00 3.41
742 1036 6.983307 AGAGCATGTACAGTGATTGATAAGAC 59.017 38.462 0.33 0.00 0.00 3.01
743 1037 7.117285 AGAGCATGTACAGTGATTGATAAGA 57.883 36.000 0.33 0.00 0.00 2.10
744 1038 8.759641 GTTAGAGCATGTACAGTGATTGATAAG 58.240 37.037 0.33 0.00 0.00 1.73
745 1039 8.257306 TGTTAGAGCATGTACAGTGATTGATAA 58.743 33.333 0.33 0.00 0.00 1.75
746 1040 7.781056 TGTTAGAGCATGTACAGTGATTGATA 58.219 34.615 0.33 0.00 0.00 2.15
747 1041 6.643388 TGTTAGAGCATGTACAGTGATTGAT 58.357 36.000 0.33 0.00 0.00 2.57
748 1042 6.036577 TGTTAGAGCATGTACAGTGATTGA 57.963 37.500 0.33 0.00 0.00 2.57
749 1043 6.726258 TTGTTAGAGCATGTACAGTGATTG 57.274 37.500 0.33 0.00 0.00 2.67
750 1044 6.149474 GGTTTGTTAGAGCATGTACAGTGATT 59.851 38.462 0.33 0.00 0.00 2.57
751 1045 5.643777 GGTTTGTTAGAGCATGTACAGTGAT 59.356 40.000 0.33 0.00 0.00 3.06
752 1046 4.994852 GGTTTGTTAGAGCATGTACAGTGA 59.005 41.667 0.33 0.00 0.00 3.41
753 1047 4.143115 CGGTTTGTTAGAGCATGTACAGTG 60.143 45.833 0.33 1.44 0.00 3.66
754 1048 3.994392 CGGTTTGTTAGAGCATGTACAGT 59.006 43.478 0.33 0.00 0.00 3.55
755 1049 4.242475 TCGGTTTGTTAGAGCATGTACAG 58.758 43.478 0.33 0.00 0.00 2.74
756 1050 4.242475 CTCGGTTTGTTAGAGCATGTACA 58.758 43.478 0.00 0.00 0.00 2.90
757 1051 4.842139 CTCGGTTTGTTAGAGCATGTAC 57.158 45.455 0.00 0.00 0.00 2.90
764 1058 5.418310 TTTTTCTGCTCGGTTTGTTAGAG 57.582 39.130 0.00 0.00 35.28 2.43
788 1082 5.419542 AGGAAGAGTTTGCCTTTTGTTTTC 58.580 37.500 0.00 0.00 0.00 2.29
793 1087 4.766891 TGGATAGGAAGAGTTTGCCTTTTG 59.233 41.667 0.00 0.00 33.28 2.44
816 1110 0.900647 GATCCTCCCCATCGGACGAT 60.901 60.000 0.65 0.65 38.63 3.73
817 1111 1.530891 GATCCTCCCCATCGGACGA 60.531 63.158 0.00 0.00 34.86 4.20
818 1112 1.188219 ATGATCCTCCCCATCGGACG 61.188 60.000 0.00 0.00 34.86 4.79
819 1113 1.002544 GAATGATCCTCCCCATCGGAC 59.997 57.143 0.00 0.00 34.86 4.79
857 1151 3.433456 CCAACTGGCCAAGGAAACAAAAT 60.433 43.478 7.01 0.00 0.00 1.82
942 1238 2.769893 ACCGTACCGTAAAAGCAATGT 58.230 42.857 0.00 0.00 0.00 2.71
955 1251 1.936547 AGATCGAAGACGTACCGTACC 59.063 52.381 3.04 0.00 42.51 3.34
956 1252 2.033322 GGAGATCGAAGACGTACCGTAC 60.033 54.545 0.00 0.00 42.51 3.67
957 1253 2.205074 GGAGATCGAAGACGTACCGTA 58.795 52.381 0.00 0.00 42.51 4.02
958 1254 1.012841 GGAGATCGAAGACGTACCGT 58.987 55.000 0.00 0.00 42.51 4.83
959 1255 0.042361 CGGAGATCGAAGACGTACCG 60.042 60.000 0.00 0.00 42.51 4.02
1171 1468 1.381165 GGCGGTTTCTTGTGGTGTGT 61.381 55.000 0.00 0.00 0.00 3.72
1180 1477 1.272554 CCTAGGAGGGGCGGTTTCTT 61.273 60.000 1.05 0.00 0.00 2.52
1181 1478 1.689582 CCTAGGAGGGGCGGTTTCT 60.690 63.158 1.05 0.00 0.00 2.52
1206 1503 4.020928 ACAATATTGTCACGGTGGTACTCA 60.021 41.667 15.47 0.00 36.50 3.41
1215 1512 3.751175 AGGTGAACACAATATTGTCACGG 59.249 43.478 22.57 14.20 39.91 4.94
1254 1551 1.735973 CTCACGAGGGATGCGATCA 59.264 57.895 0.00 0.00 0.00 2.92
1476 1803 1.298340 CACATGGCCCTGGTCGTTA 59.702 57.895 13.03 0.00 0.00 3.18
1554 1884 2.434884 CATGCGAGGGCTTGACGT 60.435 61.111 0.00 0.00 44.65 4.34
1556 1886 1.639298 GACACATGCGAGGGCTTGAC 61.639 60.000 8.66 0.00 44.65 3.18
1561 1891 0.528684 GAGTAGACACATGCGAGGGC 60.529 60.000 0.00 0.00 40.52 5.19
1836 2185 6.071952 TGAGTTTCCTCTGCCATATTTGAAAC 60.072 38.462 0.00 0.00 40.00 2.78
1950 2314 9.434275 TCCTCTGAATATCCTAGTATTGTTTCA 57.566 33.333 0.00 0.00 0.00 2.69
2314 2704 6.014499 AGCAGTTTACTCAGCTACTCCTTTTA 60.014 38.462 0.00 0.00 35.19 1.52
2316 2706 4.284746 AGCAGTTTACTCAGCTACTCCTTT 59.715 41.667 0.00 0.00 35.19 3.11
2564 4370 9.019764 ACAAACGTGACTTGAGAAAAATAAATG 57.980 29.630 5.50 0.00 0.00 2.32
2657 4466 6.490040 TGCCTAGAAGCATAAAACTTCAACTT 59.510 34.615 6.31 0.00 44.87 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.