Multiple sequence alignment - TraesCS3B01G047700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G047700 chr3B 100.000 2851 0 0 1 2851 24054096 24056946 0.000000e+00 5265.0
1 TraesCS3B01G047700 chr3B 91.463 164 13 1 1 164 8534976 8535138 1.030000e-54 224.0
2 TraesCS3B01G047700 chr3B 97.297 37 1 0 2551 2587 703004230 703004194 2.370000e-06 63.9
3 TraesCS3B01G047700 chr3D 85.800 1676 101 60 779 2359 16628675 16630308 0.000000e+00 1650.0
4 TraesCS3B01G047700 chr3D 79.126 412 22 24 241 639 16628098 16628458 2.860000e-55 226.0
5 TraesCS3B01G047700 chr3A 83.390 1764 146 62 655 2332 19976681 19974979 0.000000e+00 1498.0
6 TraesCS3B01G047700 chr3A 93.567 171 11 0 2380 2550 171783596 171783766 3.650000e-64 255.0
7 TraesCS3B01G047700 chr3A 82.667 300 15 17 298 581 19977069 19976791 6.140000e-57 231.0
8 TraesCS3B01G047700 chr3A 83.594 256 23 8 2608 2850 19974344 19974095 3.700000e-54 222.0
9 TraesCS3B01G047700 chr3A 96.078 102 3 1 1 101 718002806 718002705 6.320000e-37 165.0
10 TraesCS3B01G047700 chr3A 95.890 73 3 0 92 164 717994125 717994053 4.990000e-23 119.0
11 TraesCS3B01G047700 chr7A 94.152 171 10 0 2380 2550 4930084 4930254 7.830000e-66 261.0
12 TraesCS3B01G047700 chr6D 94.152 171 10 0 2380 2550 458949885 458950055 7.830000e-66 261.0
13 TraesCS3B01G047700 chr2B 94.152 171 10 0 2380 2550 234549694 234549864 7.830000e-66 261.0
14 TraesCS3B01G047700 chr1B 94.152 171 10 0 2380 2550 668825532 668825362 7.830000e-66 261.0
15 TraesCS3B01G047700 chr1B 93.567 171 11 0 2380 2550 619203843 619204013 3.650000e-64 255.0
16 TraesCS3B01G047700 chr5D 94.083 169 10 0 2382 2550 79827331 79827499 1.010000e-64 257.0
17 TraesCS3B01G047700 chr6A 93.567 171 11 0 2380 2550 84426585 84426755 3.650000e-64 255.0
18 TraesCS3B01G047700 chr1A 93.567 171 11 0 2380 2550 94653998 94654168 3.650000e-64 255.0
19 TraesCS3B01G047700 chr1A 94.479 163 8 1 1 163 201542653 201542814 1.700000e-62 250.0
20 TraesCS3B01G047700 chr4A 92.941 170 12 0 1 170 585063232 585063401 6.100000e-62 248.0
21 TraesCS3B01G047700 chr4A 91.279 172 13 2 1 170 585079378 585079549 1.710000e-57 233.0
22 TraesCS3B01G047700 chr4A 91.667 48 2 1 2551 2598 310767583 310767628 6.590000e-07 65.8
23 TraesCS3B01G047700 chr5B 92.073 164 12 1 1 164 660845237 660845075 2.210000e-56 230.0
24 TraesCS3B01G047700 chr5B 96.330 109 4 0 1 109 693173254 693173362 2.260000e-41 180.0
25 TraesCS3B01G047700 chr6B 95.041 121 6 0 1 121 534238793 534238913 1.040000e-44 191.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G047700 chr3B 24054096 24056946 2850 False 5265.000000 5265 100.000 1 2851 1 chr3B.!!$F2 2850
1 TraesCS3B01G047700 chr3D 16628098 16630308 2210 False 938.000000 1650 82.463 241 2359 2 chr3D.!!$F1 2118
2 TraesCS3B01G047700 chr3A 19974095 19977069 2974 True 650.333333 1498 83.217 298 2850 3 chr3A.!!$R3 2552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.036952 CGCTGTCCAGTTGAGTCCAT 60.037 55.0 0.0 0.0 0.0 3.41 F
144 145 0.106519 ATATTGGTGCCTCTGGTGCC 60.107 55.0 0.0 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1516 1703 0.900647 CCTCGAACTCCACCTCCACT 60.901 60.0 0.0 0.0 0.0 4.00 R
2128 2389 0.460722 GAGCAGAGCAGAGCAGATGA 59.539 55.0 0.0 0.0 0.0 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 6.793492 AATTCTTCTCATAGAAATAGCCGC 57.207 37.500 0.00 0.00 37.66 6.53
43 44 5.537300 TTCTTCTCATAGAAATAGCCGCT 57.463 39.130 0.00 0.00 33.19 5.52
44 45 4.876125 TCTTCTCATAGAAATAGCCGCTG 58.124 43.478 2.16 0.00 33.19 5.18
45 46 4.342378 TCTTCTCATAGAAATAGCCGCTGT 59.658 41.667 2.16 0.00 33.19 4.40
46 47 4.244425 TCTCATAGAAATAGCCGCTGTC 57.756 45.455 2.16 0.00 0.00 3.51
47 48 3.005897 TCTCATAGAAATAGCCGCTGTCC 59.994 47.826 2.16 0.00 0.00 4.02
48 49 2.698274 TCATAGAAATAGCCGCTGTCCA 59.302 45.455 2.16 0.00 0.00 4.02
49 50 2.890808 TAGAAATAGCCGCTGTCCAG 57.109 50.000 2.16 0.00 0.00 3.86
50 51 0.905357 AGAAATAGCCGCTGTCCAGT 59.095 50.000 2.16 0.00 0.00 4.00
51 52 1.279271 AGAAATAGCCGCTGTCCAGTT 59.721 47.619 2.16 0.00 0.00 3.16
52 53 1.398390 GAAATAGCCGCTGTCCAGTTG 59.602 52.381 2.16 0.00 0.00 3.16
53 54 0.613260 AATAGCCGCTGTCCAGTTGA 59.387 50.000 2.16 0.00 0.00 3.18
54 55 0.176680 ATAGCCGCTGTCCAGTTGAG 59.823 55.000 2.16 0.00 0.00 3.02
55 56 1.185618 TAGCCGCTGTCCAGTTGAGT 61.186 55.000 2.16 0.00 0.00 3.41
56 57 2.029844 GCCGCTGTCCAGTTGAGTC 61.030 63.158 0.00 0.00 0.00 3.36
57 58 1.374758 CCGCTGTCCAGTTGAGTCC 60.375 63.158 0.00 0.00 0.00 3.85
58 59 1.367471 CGCTGTCCAGTTGAGTCCA 59.633 57.895 0.00 0.00 0.00 4.02
59 60 0.036952 CGCTGTCCAGTTGAGTCCAT 60.037 55.000 0.00 0.00 0.00 3.41
60 61 1.731720 GCTGTCCAGTTGAGTCCATC 58.268 55.000 0.00 0.00 0.00 3.51
61 62 1.277557 GCTGTCCAGTTGAGTCCATCT 59.722 52.381 0.00 0.00 0.00 2.90
62 63 2.289945 GCTGTCCAGTTGAGTCCATCTT 60.290 50.000 0.00 0.00 0.00 2.40
63 64 3.594134 CTGTCCAGTTGAGTCCATCTTC 58.406 50.000 0.00 0.00 0.00 2.87
64 65 2.303022 TGTCCAGTTGAGTCCATCTTCC 59.697 50.000 0.00 0.00 0.00 3.46
65 66 2.303022 GTCCAGTTGAGTCCATCTTCCA 59.697 50.000 0.00 0.00 0.00 3.53
66 67 2.978978 TCCAGTTGAGTCCATCTTCCAA 59.021 45.455 0.00 0.00 0.00 3.53
67 68 3.394274 TCCAGTTGAGTCCATCTTCCAAA 59.606 43.478 0.00 0.00 0.00 3.28
68 69 3.503748 CCAGTTGAGTCCATCTTCCAAAC 59.496 47.826 0.00 0.00 0.00 2.93
69 70 4.392940 CAGTTGAGTCCATCTTCCAAACT 58.607 43.478 0.00 0.00 0.00 2.66
70 71 4.453819 CAGTTGAGTCCATCTTCCAAACTC 59.546 45.833 0.00 0.00 37.47 3.01
71 72 4.349342 AGTTGAGTCCATCTTCCAAACTCT 59.651 41.667 0.00 0.00 37.75 3.24
72 73 4.982241 TGAGTCCATCTTCCAAACTCTT 57.018 40.909 0.00 0.00 37.75 2.85
73 74 5.310409 TGAGTCCATCTTCCAAACTCTTT 57.690 39.130 0.00 0.00 37.75 2.52
74 75 5.065914 TGAGTCCATCTTCCAAACTCTTTG 58.934 41.667 0.00 0.00 37.75 2.77
75 76 3.823304 AGTCCATCTTCCAAACTCTTTGC 59.177 43.478 0.00 0.00 39.31 3.68
76 77 3.823304 GTCCATCTTCCAAACTCTTTGCT 59.177 43.478 0.00 0.00 39.31 3.91
77 78 4.074970 TCCATCTTCCAAACTCTTTGCTC 58.925 43.478 0.00 0.00 39.31 4.26
78 79 3.822735 CCATCTTCCAAACTCTTTGCTCA 59.177 43.478 0.00 0.00 39.31 4.26
79 80 4.320788 CCATCTTCCAAACTCTTTGCTCAC 60.321 45.833 0.00 0.00 39.31 3.51
80 81 3.884895 TCTTCCAAACTCTTTGCTCACA 58.115 40.909 0.00 0.00 39.31 3.58
81 82 3.879295 TCTTCCAAACTCTTTGCTCACAG 59.121 43.478 0.00 0.00 39.31 3.66
82 83 2.575532 TCCAAACTCTTTGCTCACAGG 58.424 47.619 0.00 0.00 39.31 4.00
83 84 1.610522 CCAAACTCTTTGCTCACAGGG 59.389 52.381 0.00 0.00 39.31 4.45
84 85 1.000938 CAAACTCTTTGCTCACAGGGC 60.001 52.381 0.00 0.00 33.36 5.19
85 86 0.475906 AACTCTTTGCTCACAGGGCT 59.524 50.000 0.00 0.00 0.00 5.19
86 87 1.352083 ACTCTTTGCTCACAGGGCTA 58.648 50.000 0.00 0.00 0.00 3.93
87 88 1.912043 ACTCTTTGCTCACAGGGCTAT 59.088 47.619 0.00 0.00 0.00 2.97
88 89 2.286872 CTCTTTGCTCACAGGGCTATG 58.713 52.381 0.00 0.00 0.00 2.23
89 90 1.630369 TCTTTGCTCACAGGGCTATGT 59.370 47.619 0.00 0.00 0.00 2.29
90 91 2.837591 TCTTTGCTCACAGGGCTATGTA 59.162 45.455 0.00 0.00 0.00 2.29
91 92 3.263170 TCTTTGCTCACAGGGCTATGTAA 59.737 43.478 0.00 0.00 0.00 2.41
92 93 3.931907 TTGCTCACAGGGCTATGTAAT 57.068 42.857 0.00 0.00 0.00 1.89
93 94 3.475566 TGCTCACAGGGCTATGTAATC 57.524 47.619 0.00 0.00 0.00 1.75
94 95 2.771372 TGCTCACAGGGCTATGTAATCA 59.229 45.455 0.00 0.00 0.00 2.57
95 96 3.134458 GCTCACAGGGCTATGTAATCAC 58.866 50.000 0.00 0.00 0.00 3.06
96 97 3.181461 GCTCACAGGGCTATGTAATCACT 60.181 47.826 0.00 0.00 0.00 3.41
97 98 4.375272 CTCACAGGGCTATGTAATCACTG 58.625 47.826 0.00 0.00 0.00 3.66
98 99 3.774766 TCACAGGGCTATGTAATCACTGT 59.225 43.478 0.00 0.00 38.13 3.55
99 100 4.225042 TCACAGGGCTATGTAATCACTGTT 59.775 41.667 0.00 0.00 35.72 3.16
100 101 4.333649 CACAGGGCTATGTAATCACTGTTG 59.666 45.833 0.00 0.00 35.72 3.33
101 102 4.019321 ACAGGGCTATGTAATCACTGTTGT 60.019 41.667 0.00 0.00 34.36 3.32
102 103 5.188948 ACAGGGCTATGTAATCACTGTTGTA 59.811 40.000 0.00 0.00 34.36 2.41
103 104 5.523916 CAGGGCTATGTAATCACTGTTGTAC 59.476 44.000 0.00 0.00 0.00 2.90
104 105 5.188948 AGGGCTATGTAATCACTGTTGTACA 59.811 40.000 0.00 0.00 0.00 2.90
105 106 5.878116 GGGCTATGTAATCACTGTTGTACAA 59.122 40.000 3.59 3.59 30.71 2.41
106 107 6.542370 GGGCTATGTAATCACTGTTGTACAAT 59.458 38.462 12.26 0.00 30.71 2.71
107 108 7.409697 GGCTATGTAATCACTGTTGTACAATG 58.590 38.462 12.26 10.41 30.71 2.82
108 109 7.065803 GGCTATGTAATCACTGTTGTACAATGT 59.934 37.037 12.26 11.04 30.71 2.71
109 110 8.116753 GCTATGTAATCACTGTTGTACAATGTC 58.883 37.037 12.26 0.00 30.71 3.06
110 111 9.371136 CTATGTAATCACTGTTGTACAATGTCT 57.629 33.333 12.26 4.26 30.71 3.41
112 113 9.890629 ATGTAATCACTGTTGTACAATGTCTAT 57.109 29.630 12.26 7.24 30.71 1.98
113 114 9.150348 TGTAATCACTGTTGTACAATGTCTATG 57.850 33.333 12.26 5.42 0.00 2.23
114 115 7.615582 AATCACTGTTGTACAATGTCTATGG 57.384 36.000 12.26 2.84 0.00 2.74
115 116 5.487433 TCACTGTTGTACAATGTCTATGGG 58.513 41.667 12.26 2.21 0.00 4.00
116 117 5.247337 TCACTGTTGTACAATGTCTATGGGA 59.753 40.000 12.26 4.32 0.00 4.37
117 118 6.070251 TCACTGTTGTACAATGTCTATGGGAT 60.070 38.462 12.26 0.00 0.00 3.85
118 119 6.037500 CACTGTTGTACAATGTCTATGGGATG 59.962 42.308 12.26 0.00 0.00 3.51
119 120 6.070251 ACTGTTGTACAATGTCTATGGGATGA 60.070 38.462 12.26 0.00 0.00 2.92
120 121 6.716284 TGTTGTACAATGTCTATGGGATGAA 58.284 36.000 12.26 0.00 0.00 2.57
121 122 7.345691 TGTTGTACAATGTCTATGGGATGAAT 58.654 34.615 12.26 0.00 0.00 2.57
122 123 7.282901 TGTTGTACAATGTCTATGGGATGAATG 59.717 37.037 12.26 0.00 0.00 2.67
123 124 6.298361 TGTACAATGTCTATGGGATGAATGG 58.702 40.000 0.00 0.00 0.00 3.16
124 125 5.651612 ACAATGTCTATGGGATGAATGGA 57.348 39.130 0.00 0.00 0.00 3.41
125 126 6.017211 ACAATGTCTATGGGATGAATGGAA 57.983 37.500 0.00 0.00 0.00 3.53
126 127 6.617538 ACAATGTCTATGGGATGAATGGAAT 58.382 36.000 0.00 0.00 0.00 3.01
127 128 7.758609 ACAATGTCTATGGGATGAATGGAATA 58.241 34.615 0.00 0.00 0.00 1.75
128 129 8.396388 ACAATGTCTATGGGATGAATGGAATAT 58.604 33.333 0.00 0.00 0.00 1.28
129 130 9.251440 CAATGTCTATGGGATGAATGGAATATT 57.749 33.333 0.00 0.00 0.00 1.28
130 131 8.818622 ATGTCTATGGGATGAATGGAATATTG 57.181 34.615 0.00 0.00 0.00 1.90
131 132 7.177184 TGTCTATGGGATGAATGGAATATTGG 58.823 38.462 0.00 0.00 0.00 3.16
132 133 7.177878 GTCTATGGGATGAATGGAATATTGGT 58.822 38.462 0.00 0.00 0.00 3.67
133 134 7.121759 GTCTATGGGATGAATGGAATATTGGTG 59.878 40.741 0.00 0.00 0.00 4.17
134 135 3.896888 TGGGATGAATGGAATATTGGTGC 59.103 43.478 0.00 0.00 0.00 5.01
135 136 3.259123 GGGATGAATGGAATATTGGTGCC 59.741 47.826 0.00 0.00 0.00 5.01
136 137 4.154942 GGATGAATGGAATATTGGTGCCT 58.845 43.478 0.00 0.00 0.00 4.75
137 138 4.219288 GGATGAATGGAATATTGGTGCCTC 59.781 45.833 0.00 0.00 0.00 4.70
138 139 4.524802 TGAATGGAATATTGGTGCCTCT 57.475 40.909 0.00 0.00 0.00 3.69
139 140 4.209538 TGAATGGAATATTGGTGCCTCTG 58.790 43.478 0.00 0.00 0.00 3.35
140 141 2.734755 TGGAATATTGGTGCCTCTGG 57.265 50.000 0.00 0.00 0.00 3.86
141 142 1.922447 TGGAATATTGGTGCCTCTGGT 59.078 47.619 0.00 0.00 0.00 4.00
142 143 2.301346 GGAATATTGGTGCCTCTGGTG 58.699 52.381 0.00 0.00 0.00 4.17
143 144 1.678101 GAATATTGGTGCCTCTGGTGC 59.322 52.381 0.00 0.00 0.00 5.01
144 145 0.106519 ATATTGGTGCCTCTGGTGCC 60.107 55.000 0.00 0.00 0.00 5.01
145 146 2.210144 TATTGGTGCCTCTGGTGCCC 62.210 60.000 0.00 0.00 0.00 5.36
148 149 4.416738 GTGCCTCTGGTGCCCCTC 62.417 72.222 0.00 0.00 0.00 4.30
149 150 4.664267 TGCCTCTGGTGCCCCTCT 62.664 66.667 0.00 0.00 0.00 3.69
150 151 3.334054 GCCTCTGGTGCCCCTCTT 61.334 66.667 0.00 0.00 0.00 2.85
151 152 2.911926 GCCTCTGGTGCCCCTCTTT 61.912 63.158 0.00 0.00 0.00 2.52
152 153 1.001641 CCTCTGGTGCCCCTCTTTG 60.002 63.158 0.00 0.00 0.00 2.77
153 154 1.763770 CTCTGGTGCCCCTCTTTGT 59.236 57.895 0.00 0.00 0.00 2.83
154 155 0.111253 CTCTGGTGCCCCTCTTTGTT 59.889 55.000 0.00 0.00 0.00 2.83
155 156 0.110486 TCTGGTGCCCCTCTTTGTTC 59.890 55.000 0.00 0.00 0.00 3.18
156 157 0.178992 CTGGTGCCCCTCTTTGTTCA 60.179 55.000 0.00 0.00 0.00 3.18
157 158 0.260230 TGGTGCCCCTCTTTGTTCAA 59.740 50.000 0.00 0.00 0.00 2.69
158 159 1.342474 TGGTGCCCCTCTTTGTTCAAA 60.342 47.619 0.00 0.00 0.00 2.69
159 160 1.760029 GGTGCCCCTCTTTGTTCAAAA 59.240 47.619 0.00 0.00 0.00 2.44
160 161 2.169561 GGTGCCCCTCTTTGTTCAAAAA 59.830 45.455 0.00 0.00 0.00 1.94
195 196 4.865761 TACGCGCGTGCTGGGATC 62.866 66.667 42.78 0.00 39.65 3.36
198 199 4.819761 GCGCGTGCTGGGATCTGA 62.820 66.667 15.02 0.00 38.39 3.27
199 200 2.125552 CGCGTGCTGGGATCTGAA 60.126 61.111 0.00 0.00 0.00 3.02
200 201 1.741401 CGCGTGCTGGGATCTGAAA 60.741 57.895 0.00 0.00 0.00 2.69
201 202 1.298157 CGCGTGCTGGGATCTGAAAA 61.298 55.000 0.00 0.00 0.00 2.29
202 203 1.098050 GCGTGCTGGGATCTGAAAAT 58.902 50.000 0.00 0.00 0.00 1.82
203 204 2.288666 GCGTGCTGGGATCTGAAAATA 58.711 47.619 0.00 0.00 0.00 1.40
204 205 2.682856 GCGTGCTGGGATCTGAAAATAA 59.317 45.455 0.00 0.00 0.00 1.40
205 206 3.128589 GCGTGCTGGGATCTGAAAATAAA 59.871 43.478 0.00 0.00 0.00 1.40
206 207 4.202050 GCGTGCTGGGATCTGAAAATAAAT 60.202 41.667 0.00 0.00 0.00 1.40
207 208 5.276270 CGTGCTGGGATCTGAAAATAAATG 58.724 41.667 0.00 0.00 0.00 2.32
208 209 5.594926 GTGCTGGGATCTGAAAATAAATGG 58.405 41.667 0.00 0.00 0.00 3.16
209 210 4.099881 TGCTGGGATCTGAAAATAAATGGC 59.900 41.667 0.00 0.00 0.00 4.40
210 211 4.794003 GCTGGGATCTGAAAATAAATGGCG 60.794 45.833 0.00 0.00 0.00 5.69
211 212 4.277476 TGGGATCTGAAAATAAATGGCGT 58.723 39.130 0.00 0.00 0.00 5.68
212 213 4.338118 TGGGATCTGAAAATAAATGGCGTC 59.662 41.667 0.00 0.00 0.00 5.19
213 214 4.580580 GGGATCTGAAAATAAATGGCGTCT 59.419 41.667 0.00 0.00 0.00 4.18
214 215 5.278022 GGGATCTGAAAATAAATGGCGTCTC 60.278 44.000 0.00 0.00 0.00 3.36
215 216 5.529060 GGATCTGAAAATAAATGGCGTCTCT 59.471 40.000 0.00 0.00 0.00 3.10
216 217 6.293135 GGATCTGAAAATAAATGGCGTCTCTC 60.293 42.308 0.00 0.00 0.00 3.20
217 218 4.876107 TCTGAAAATAAATGGCGTCTCTCC 59.124 41.667 0.00 0.00 0.00 3.71
218 219 4.843728 TGAAAATAAATGGCGTCTCTCCT 58.156 39.130 0.00 0.00 0.00 3.69
219 220 4.876107 TGAAAATAAATGGCGTCTCTCCTC 59.124 41.667 0.00 0.00 0.00 3.71
220 221 4.487714 AAATAAATGGCGTCTCTCCTCA 57.512 40.909 0.00 0.00 0.00 3.86
221 222 3.742433 ATAAATGGCGTCTCTCCTCAG 57.258 47.619 0.00 0.00 0.00 3.35
222 223 0.539051 AAATGGCGTCTCTCCTCAGG 59.461 55.000 0.00 0.00 0.00 3.86
223 224 0.616111 AATGGCGTCTCTCCTCAGGT 60.616 55.000 0.00 0.00 0.00 4.00
224 225 1.040339 ATGGCGTCTCTCCTCAGGTC 61.040 60.000 0.00 0.00 0.00 3.85
225 226 2.419739 GGCGTCTCTCCTCAGGTCC 61.420 68.421 0.00 0.00 0.00 4.46
226 227 2.766400 GCGTCTCTCCTCAGGTCCG 61.766 68.421 0.00 0.00 0.00 4.79
227 228 2.115911 CGTCTCTCCTCAGGTCCGG 61.116 68.421 0.00 0.00 0.00 5.14
228 229 1.000646 GTCTCTCCTCAGGTCCGGT 60.001 63.158 0.00 0.00 0.00 5.28
229 230 1.033202 GTCTCTCCTCAGGTCCGGTC 61.033 65.000 0.00 0.00 0.00 4.79
230 231 1.000771 CTCTCCTCAGGTCCGGTCA 60.001 63.158 0.00 0.00 0.00 4.02
231 232 0.612174 CTCTCCTCAGGTCCGGTCAA 60.612 60.000 0.00 0.00 0.00 3.18
232 233 0.612174 TCTCCTCAGGTCCGGTCAAG 60.612 60.000 0.00 0.00 0.00 3.02
233 234 2.232298 CTCCTCAGGTCCGGTCAAGC 62.232 65.000 0.00 0.00 0.00 4.01
234 235 2.125912 CTCAGGTCCGGTCAAGCG 60.126 66.667 0.00 0.00 0.00 4.68
235 236 3.649277 CTCAGGTCCGGTCAAGCGG 62.649 68.421 14.21 14.21 0.00 5.52
257 258 0.786435 AAGGCCAGAAAGTTGGGGAT 59.214 50.000 5.01 0.00 38.72 3.85
293 295 2.203209 GGCATGGGGCTAGGTTCG 60.203 66.667 0.00 0.00 44.01 3.95
299 301 1.749258 GGGGCTAGGTTCGCTTTGG 60.749 63.158 0.00 0.00 0.00 3.28
301 303 1.298667 GGCTAGGTTCGCTTTGGGA 59.701 57.895 0.00 0.00 0.00 4.37
303 305 1.025113 GCTAGGTTCGCTTTGGGACC 61.025 60.000 0.00 0.00 0.00 4.46
305 307 2.175035 TAGGTTCGCTTTGGGACCCG 62.175 60.000 5.91 0.00 32.67 5.28
355 365 2.934570 CGAAAAGGGGTCGGTCGGA 61.935 63.158 0.00 0.00 34.85 4.55
482 494 3.136750 CCTCCGCTCCATCTCCTG 58.863 66.667 0.00 0.00 0.00 3.86
483 495 1.456518 CCTCCGCTCCATCTCCTGA 60.457 63.158 0.00 0.00 0.00 3.86
484 496 1.739049 CTCCGCTCCATCTCCTGAC 59.261 63.158 0.00 0.00 0.00 3.51
490 502 1.703411 CTCCATCTCCTGACTCTCCC 58.297 60.000 0.00 0.00 0.00 4.30
517 529 2.835431 CGTTGCCCACCCAACCAA 60.835 61.111 0.00 0.00 41.50 3.67
530 542 2.746803 AACCAAGCGCGCGTAATCC 61.747 57.895 32.35 14.36 0.00 3.01
572 591 3.193267 GGAATTAAGCTGGTGCAATCACA 59.807 43.478 0.00 0.00 44.87 3.58
573 592 3.855689 ATTAAGCTGGTGCAATCACAC 57.144 42.857 0.00 0.00 44.87 3.82
574 593 1.155889 TAAGCTGGTGCAATCACACG 58.844 50.000 0.00 0.00 44.87 4.49
575 594 2.126734 GCTGGTGCAATCACACGC 60.127 61.111 0.00 0.00 44.87 5.34
576 595 2.906939 GCTGGTGCAATCACACGCA 61.907 57.895 0.00 0.00 44.87 5.24
589 608 2.736995 ACGCACGCACGCATTACT 60.737 55.556 0.00 0.00 36.19 2.24
590 609 1.444724 ACGCACGCACGCATTACTA 60.445 52.632 0.00 0.00 36.19 1.82
591 610 1.269810 CGCACGCACGCATTACTAG 59.730 57.895 0.00 0.00 0.00 2.57
592 611 1.410737 CGCACGCACGCATTACTAGT 61.411 55.000 0.00 0.00 0.00 2.57
593 612 0.719465 GCACGCACGCATTACTAGTT 59.281 50.000 0.00 0.00 0.00 2.24
594 613 1.266891 GCACGCACGCATTACTAGTTC 60.267 52.381 0.00 0.00 0.00 3.01
595 614 1.989864 CACGCACGCATTACTAGTTCA 59.010 47.619 0.00 0.00 0.00 3.18
596 615 2.603110 CACGCACGCATTACTAGTTCAT 59.397 45.455 0.00 0.00 0.00 2.57
616 635 5.180271 TCATTTCATCACCGTAACCCTAAC 58.820 41.667 0.00 0.00 0.00 2.34
673 740 3.982241 GGTATACGACCCCGGCCG 61.982 72.222 21.04 21.04 43.25 6.13
694 761 1.444917 GATGGTCGCCCGGGAAAATC 61.445 60.000 29.31 15.04 0.00 2.17
695 762 2.045731 GGTCGCCCGGGAAAATCA 60.046 61.111 29.31 0.00 0.00 2.57
702 769 1.209127 CCGGGAAAATCACACGCAC 59.791 57.895 0.00 0.00 0.00 5.34
703 770 1.154488 CGGGAAAATCACACGCACG 60.154 57.895 0.00 0.00 0.00 5.34
736 808 1.292223 GCCGCTGTACTCCACAAGA 59.708 57.895 0.00 0.00 36.48 3.02
795 914 3.236322 CGTGCGTACGCCAAGAAA 58.764 55.556 35.11 14.73 44.11 2.52
806 925 3.529533 ACGCCAAGAAATCAGAGAGATG 58.470 45.455 0.00 0.00 36.96 2.90
817 936 1.203287 CAGAGAGATGTCGTCAGGCAA 59.797 52.381 0.00 0.00 34.62 4.52
818 937 2.106566 AGAGAGATGTCGTCAGGCAAT 58.893 47.619 0.00 0.00 34.62 3.56
819 938 3.067320 CAGAGAGATGTCGTCAGGCAATA 59.933 47.826 0.00 0.00 34.62 1.90
820 939 3.067461 AGAGAGATGTCGTCAGGCAATAC 59.933 47.826 0.00 0.00 34.62 1.89
910 1040 0.452784 CGCAAAGCTTTCCTGTACGC 60.453 55.000 9.23 7.03 0.00 4.42
988 1121 0.468400 TAAAACCACCCCACCTGCAC 60.468 55.000 0.00 0.00 0.00 4.57
989 1122 2.522198 AAAACCACCCCACCTGCACA 62.522 55.000 0.00 0.00 0.00 4.57
990 1123 2.927201 AAACCACCCCACCTGCACAG 62.927 60.000 0.00 0.00 0.00 3.66
1003 1136 2.872557 CACAGGCAGCAACCATCG 59.127 61.111 0.00 0.00 0.00 3.84
1011 1144 3.747976 GCAACCATCGCCACCACC 61.748 66.667 0.00 0.00 0.00 4.61
1021 1154 2.629656 GCCACCACCATCACTGTGC 61.630 63.158 2.12 0.00 32.30 4.57
1022 1155 2.327343 CCACCACCATCACTGTGCG 61.327 63.158 2.12 0.00 32.30 5.34
1023 1156 1.597854 CACCACCATCACTGTGCGT 60.598 57.895 2.12 0.00 32.30 5.24
1024 1157 0.320334 CACCACCATCACTGTGCGTA 60.320 55.000 2.12 0.00 32.30 4.42
1270 1427 1.139095 CGAGTACCAGTTCTCGCCC 59.861 63.158 12.79 0.00 44.82 6.13
1463 1635 3.753434 CTCTGCAGGACGAGCGGT 61.753 66.667 15.13 0.00 39.38 5.68
1516 1703 2.042843 GGCGAGGAGGAGGAGGAA 60.043 66.667 0.00 0.00 0.00 3.36
1524 1711 0.041982 GAGGAGGAGGAAGTGGAGGT 59.958 60.000 0.00 0.00 0.00 3.85
1607 1812 0.885596 GGAGATGAGGATGCAGCAGC 60.886 60.000 3.51 0.62 42.57 5.25
1681 1892 1.978782 CATTTCGCCTTCGTTTCTTGC 59.021 47.619 0.00 0.00 36.96 4.01
1688 1899 2.485814 GCCTTCGTTTCTTGCTCTTCAT 59.514 45.455 0.00 0.00 0.00 2.57
1744 1955 4.669206 TCCTTCGGTTACAGTGTGTTTA 57.331 40.909 5.88 0.00 0.00 2.01
1745 1956 5.217978 TCCTTCGGTTACAGTGTGTTTAT 57.782 39.130 5.88 0.00 0.00 1.40
1761 1974 3.436704 TGTTTATTCTTGCTTCCTCGCAG 59.563 43.478 0.00 0.00 41.55 5.18
1762 1975 3.334583 TTATTCTTGCTTCCTCGCAGT 57.665 42.857 0.00 0.00 41.55 4.40
1765 1978 0.106708 TCTTGCTTCCTCGCAGTGTT 59.893 50.000 0.00 0.00 41.55 3.32
1766 1979 0.236711 CTTGCTTCCTCGCAGTGTTG 59.763 55.000 0.00 0.00 41.55 3.33
1768 1981 0.463654 TGCTTCCTCGCAGTGTTGTT 60.464 50.000 0.00 0.00 34.44 2.83
1769 1982 0.040958 GCTTCCTCGCAGTGTTGTTG 60.041 55.000 0.00 0.00 0.00 3.33
1771 1984 2.479837 CTTCCTCGCAGTGTTGTTGTA 58.520 47.619 0.00 0.00 0.00 2.41
1772 1985 2.148916 TCCTCGCAGTGTTGTTGTAG 57.851 50.000 0.00 0.00 0.00 2.74
1774 1987 1.526887 CCTCGCAGTGTTGTTGTAGTG 59.473 52.381 0.00 0.00 0.00 2.74
1775 1988 2.201732 CTCGCAGTGTTGTTGTAGTGT 58.798 47.619 0.00 0.00 0.00 3.55
1776 1989 2.607635 CTCGCAGTGTTGTTGTAGTGTT 59.392 45.455 0.00 0.00 0.00 3.32
1777 1990 2.605818 TCGCAGTGTTGTTGTAGTGTTC 59.394 45.455 0.00 0.00 0.00 3.18
1795 2012 6.556212 AGTGTTCTAGTATCATGTTCACTCG 58.444 40.000 0.00 0.00 0.00 4.18
1829 2046 1.339929 ACCCAAAATTCCGTGCTGTTC 59.660 47.619 0.00 0.00 0.00 3.18
1835 2053 0.593128 ATTCCGTGCTGTTCACTTGC 59.407 50.000 0.00 0.00 43.46 4.01
1856 2074 3.674753 GCTGTGGTGTTGATAAATGTTGC 59.325 43.478 0.00 0.00 0.00 4.17
1859 2077 3.006323 GTGGTGTTGATAAATGTTGCCCA 59.994 43.478 0.00 0.00 0.00 5.36
1907 2129 3.539604 AGTATTCTTCAGTCATGGCAGC 58.460 45.455 0.00 0.00 0.00 5.25
1924 2146 4.088762 CACGCCACACCACGCATC 62.089 66.667 0.00 0.00 0.00 3.91
1958 2180 2.100252 TCTCCGTTCGAGTTCAGTTGTT 59.900 45.455 0.00 0.00 39.84 2.83
1964 2186 6.309494 TCCGTTCGAGTTCAGTTGTTTATATG 59.691 38.462 0.00 0.00 0.00 1.78
1965 2187 6.309494 CCGTTCGAGTTCAGTTGTTTATATGA 59.691 38.462 0.00 0.00 0.00 2.15
1966 2188 7.384124 CGTTCGAGTTCAGTTGTTTATATGAG 58.616 38.462 0.00 0.00 0.00 2.90
1969 2191 8.462143 TCGAGTTCAGTTGTTTATATGAGTTC 57.538 34.615 0.00 0.00 0.00 3.01
2003 2259 5.636965 TCAAGAAGAAGAAGAGAGCAAATCG 59.363 40.000 0.00 0.00 0.00 3.34
2026 2282 2.297880 GGGAAAGTTGGCCGTAAACAAT 59.702 45.455 7.15 0.00 0.00 2.71
2027 2283 3.313690 GGAAAGTTGGCCGTAAACAATG 58.686 45.455 7.15 0.00 0.00 2.82
2058 2314 2.742372 TTTCTCTCAAGGCGCGGC 60.742 61.111 27.06 27.06 0.00 6.53
2083 2339 4.142160 GCCTCATCTCCCATTGTTAAAACC 60.142 45.833 0.00 0.00 0.00 3.27
2084 2340 5.016173 CCTCATCTCCCATTGTTAAAACCA 58.984 41.667 0.00 0.00 0.00 3.67
2085 2341 5.480073 CCTCATCTCCCATTGTTAAAACCAA 59.520 40.000 0.00 0.00 0.00 3.67
2174 2435 3.472736 GAACCGGCGCCGTTTTGTT 62.473 57.895 43.12 37.02 37.81 2.83
2175 2436 3.472736 AACCGGCGCCGTTTTGTTC 62.473 57.895 43.12 6.24 37.81 3.18
2185 2446 3.067106 GCCGTTTTGTTCTCTCTGATCA 58.933 45.455 0.00 0.00 0.00 2.92
2187 2448 4.201763 GCCGTTTTGTTCTCTCTGATCATC 60.202 45.833 0.00 0.00 0.00 2.92
2244 2506 1.347707 TCGAGCAAGTCCAGGAAATGT 59.652 47.619 0.00 0.00 0.00 2.71
2246 2508 2.673368 CGAGCAAGTCCAGGAAATGTAC 59.327 50.000 0.00 0.00 0.00 2.90
2247 2509 3.617531 CGAGCAAGTCCAGGAAATGTACT 60.618 47.826 0.00 0.00 0.00 2.73
2320 2582 0.101219 GCATGATGCCGGAAAGGTTC 59.899 55.000 5.05 0.00 43.70 3.62
2327 2589 1.792118 GCCGGAAAGGTTCAAAGCGT 61.792 55.000 5.05 0.00 43.70 5.07
2363 2625 0.891373 CTCGTTTCTCAGAGGCCAGA 59.109 55.000 5.01 0.00 0.00 3.86
2364 2626 1.480137 CTCGTTTCTCAGAGGCCAGAT 59.520 52.381 5.01 0.00 0.00 2.90
2365 2627 1.902508 TCGTTTCTCAGAGGCCAGATT 59.097 47.619 5.01 0.00 0.00 2.40
2366 2628 2.303022 TCGTTTCTCAGAGGCCAGATTT 59.697 45.455 5.01 0.00 0.00 2.17
2367 2629 2.417933 CGTTTCTCAGAGGCCAGATTTG 59.582 50.000 5.01 0.00 0.00 2.32
2368 2630 2.119801 TTCTCAGAGGCCAGATTTGC 57.880 50.000 5.01 0.00 0.00 3.68
2374 2636 3.680156 GGCCAGATTTGCCGAACA 58.320 55.556 0.00 0.00 39.48 3.18
2375 2637 1.508088 GGCCAGATTTGCCGAACAG 59.492 57.895 0.00 0.00 39.48 3.16
2377 2639 0.960364 GCCAGATTTGCCGAACAGGA 60.960 55.000 0.00 0.00 45.00 3.86
2378 2640 1.533625 CCAGATTTGCCGAACAGGAA 58.466 50.000 0.00 0.00 45.00 3.36
2379 2641 2.094675 CCAGATTTGCCGAACAGGAAT 58.905 47.619 0.00 0.00 45.00 3.01
2380 2642 2.098117 CCAGATTTGCCGAACAGGAATC 59.902 50.000 0.00 0.00 45.00 2.52
2381 2643 2.009774 AGATTTGCCGAACAGGAATCG 58.990 47.619 0.00 0.00 45.00 3.34
2389 2651 1.593006 CGAACAGGAATCGGGAATTCG 59.407 52.381 0.00 0.00 44.08 3.34
2390 2652 1.940613 GAACAGGAATCGGGAATTCGG 59.059 52.381 0.00 0.00 44.08 4.30
2391 2653 1.200519 ACAGGAATCGGGAATTCGGA 58.799 50.000 0.00 0.00 44.08 4.55
2393 2655 1.412710 CAGGAATCGGGAATTCGGAGA 59.587 52.381 0.00 0.00 44.08 3.71
2394 2656 1.689273 AGGAATCGGGAATTCGGAGAG 59.311 52.381 0.00 0.00 44.08 3.20
2395 2657 1.270358 GGAATCGGGAATTCGGAGAGG 60.270 57.143 0.00 0.00 44.08 3.69
2397 2659 1.759459 ATCGGGAATTCGGAGAGGCC 61.759 60.000 0.00 0.00 38.43 5.19
2398 2660 2.731571 CGGGAATTCGGAGAGGCCA 61.732 63.158 5.01 0.00 38.43 5.36
2399 2661 1.839894 GGGAATTCGGAGAGGCCAT 59.160 57.895 5.01 0.00 38.43 4.40
2400 2662 1.056660 GGGAATTCGGAGAGGCCATA 58.943 55.000 5.01 0.00 38.43 2.74
2401 2663 1.630878 GGGAATTCGGAGAGGCCATAT 59.369 52.381 5.01 0.00 38.43 1.78
2402 2664 2.616510 GGGAATTCGGAGAGGCCATATG 60.617 54.545 5.01 0.00 38.43 1.78
2403 2665 2.303022 GGAATTCGGAGAGGCCATATGA 59.697 50.000 5.01 0.00 38.43 2.15
2404 2666 3.594134 GAATTCGGAGAGGCCATATGAG 58.406 50.000 5.01 0.00 38.43 2.90
2405 2667 2.381752 TTCGGAGAGGCCATATGAGA 57.618 50.000 5.01 0.00 38.43 3.27
2406 2668 2.381752 TCGGAGAGGCCATATGAGAA 57.618 50.000 5.01 0.00 35.94 2.87
2407 2669 2.677914 TCGGAGAGGCCATATGAGAAA 58.322 47.619 5.01 0.00 35.94 2.52
2409 2671 2.630098 CGGAGAGGCCATATGAGAAAGA 59.370 50.000 5.01 0.00 35.94 2.52
2410 2672 3.260380 CGGAGAGGCCATATGAGAAAGAT 59.740 47.826 5.01 0.00 35.94 2.40
2415 2677 1.808945 GCCATATGAGAAAGATGGGCG 59.191 52.381 3.65 0.00 46.19 6.13
2417 2679 2.810274 CCATATGAGAAAGATGGGCGTG 59.190 50.000 3.65 0.00 42.96 5.34
2418 2680 3.470709 CATATGAGAAAGATGGGCGTGT 58.529 45.455 0.00 0.00 0.00 4.49
2420 2682 1.808411 TGAGAAAGATGGGCGTGTTC 58.192 50.000 0.00 0.00 0.00 3.18
2422 2684 2.151202 GAGAAAGATGGGCGTGTTCAA 58.849 47.619 0.00 0.00 0.00 2.69
2423 2685 2.552315 GAGAAAGATGGGCGTGTTCAAA 59.448 45.455 0.00 0.00 0.00 2.69
2424 2686 2.955660 AGAAAGATGGGCGTGTTCAAAA 59.044 40.909 0.00 0.00 0.00 2.44
2425 2687 3.573967 AGAAAGATGGGCGTGTTCAAAAT 59.426 39.130 0.00 0.00 0.00 1.82
2427 2689 1.545582 AGATGGGCGTGTTCAAAATGG 59.454 47.619 0.00 0.00 0.00 3.16
2428 2690 1.543802 GATGGGCGTGTTCAAAATGGA 59.456 47.619 0.00 0.00 0.00 3.41
2429 2691 1.403814 TGGGCGTGTTCAAAATGGAA 58.596 45.000 0.00 0.00 0.00 3.53
2430 2692 1.967066 TGGGCGTGTTCAAAATGGAAT 59.033 42.857 0.00 0.00 0.00 3.01
2431 2693 2.288702 TGGGCGTGTTCAAAATGGAATG 60.289 45.455 0.00 0.00 0.00 2.67
2433 2695 3.368323 GGGCGTGTTCAAAATGGAATGAT 60.368 43.478 0.00 0.00 0.00 2.45
2434 2696 3.859386 GGCGTGTTCAAAATGGAATGATC 59.141 43.478 0.00 0.00 0.00 2.92
2435 2697 3.859386 GCGTGTTCAAAATGGAATGATCC 59.141 43.478 0.00 0.00 46.76 3.36
2436 2698 4.380867 GCGTGTTCAAAATGGAATGATCCT 60.381 41.667 0.00 0.00 46.70 3.24
2437 2699 5.335127 CGTGTTCAAAATGGAATGATCCTC 58.665 41.667 0.00 0.00 46.70 3.71
2438 2700 5.124457 CGTGTTCAAAATGGAATGATCCTCT 59.876 40.000 0.00 0.00 46.70 3.69
2440 2702 7.381323 GTGTTCAAAATGGAATGATCCTCTTT 58.619 34.615 0.00 0.00 46.70 2.52
2441 2703 7.874528 GTGTTCAAAATGGAATGATCCTCTTTT 59.125 33.333 0.00 0.88 46.70 2.27
2442 2704 8.090214 TGTTCAAAATGGAATGATCCTCTTTTC 58.910 33.333 0.00 0.00 46.70 2.29
2444 2706 8.059798 TCAAAATGGAATGATCCTCTTTTCTC 57.940 34.615 0.00 0.00 46.70 2.87
2447 2709 7.584122 AATGGAATGATCCTCTTTTCTCATG 57.416 36.000 0.00 0.00 46.70 3.07
2448 2710 4.885907 TGGAATGATCCTCTTTTCTCATGC 59.114 41.667 0.00 0.00 46.70 4.06
2449 2711 5.131784 GGAATGATCCTCTTTTCTCATGCT 58.868 41.667 0.00 0.00 42.93 3.79
2450 2712 5.593502 GGAATGATCCTCTTTTCTCATGCTT 59.406 40.000 0.00 0.00 42.93 3.91
2451 2713 6.452494 AATGATCCTCTTTTCTCATGCTTG 57.548 37.500 0.00 0.00 0.00 4.01
2452 2714 3.693085 TGATCCTCTTTTCTCATGCTTGC 59.307 43.478 0.00 0.00 0.00 4.01
2455 2717 4.084287 TCCTCTTTTCTCATGCTTGCAAT 58.916 39.130 0.00 0.00 0.00 3.56
2458 2720 5.699458 CCTCTTTTCTCATGCTTGCAATTTT 59.301 36.000 0.00 0.00 0.00 1.82
2459 2721 6.347402 CCTCTTTTCTCATGCTTGCAATTTTG 60.347 38.462 0.00 0.00 0.00 2.44
2460 2722 6.050432 TCTTTTCTCATGCTTGCAATTTTGT 58.950 32.000 0.00 0.00 0.00 2.83
2461 2723 6.539464 TCTTTTCTCATGCTTGCAATTTTGTT 59.461 30.769 0.00 0.00 0.00 2.83
2462 2724 5.660629 TTCTCATGCTTGCAATTTTGTTG 57.339 34.783 0.00 0.00 0.00 3.33
2463 2725 4.695396 TCTCATGCTTGCAATTTTGTTGT 58.305 34.783 0.00 0.00 0.00 3.32
2464 2726 4.746115 TCTCATGCTTGCAATTTTGTTGTC 59.254 37.500 0.00 0.00 0.00 3.18
2465 2727 3.808726 TCATGCTTGCAATTTTGTTGTCC 59.191 39.130 0.00 0.00 0.00 4.02
2466 2728 3.257469 TGCTTGCAATTTTGTTGTCCA 57.743 38.095 0.00 0.00 0.00 4.02
2467 2729 2.935201 TGCTTGCAATTTTGTTGTCCAC 59.065 40.909 0.00 0.00 0.00 4.02
2468 2730 2.935201 GCTTGCAATTTTGTTGTCCACA 59.065 40.909 0.00 0.00 0.00 4.17
2469 2731 3.373439 GCTTGCAATTTTGTTGTCCACAA 59.627 39.130 0.00 0.00 44.11 3.33
2498 2760 3.444618 AAAATCCGAAAAGACGTACGC 57.555 42.857 16.72 8.42 0.00 4.42
2499 2761 2.068837 AATCCGAAAAGACGTACGCA 57.931 45.000 16.72 0.00 0.00 5.24
2500 2762 2.288961 ATCCGAAAAGACGTACGCAT 57.711 45.000 16.72 0.13 0.00 4.73
2501 2763 2.917701 TCCGAAAAGACGTACGCATA 57.082 45.000 16.72 0.00 0.00 3.14
2502 2764 3.214697 TCCGAAAAGACGTACGCATAA 57.785 42.857 16.72 0.00 0.00 1.90
2503 2765 2.916716 TCCGAAAAGACGTACGCATAAC 59.083 45.455 16.72 2.13 0.00 1.89
2504 2766 2.662637 CCGAAAAGACGTACGCATAACA 59.337 45.455 16.72 0.00 0.00 2.41
2505 2767 3.241552 CCGAAAAGACGTACGCATAACAG 60.242 47.826 16.72 2.50 0.00 3.16
2507 2769 4.488258 CGAAAAGACGTACGCATAACAGAC 60.488 45.833 16.72 0.00 0.00 3.51
2508 2770 3.844577 AAGACGTACGCATAACAGACT 57.155 42.857 16.72 0.00 0.00 3.24
2509 2771 3.402058 AGACGTACGCATAACAGACTC 57.598 47.619 16.72 0.82 0.00 3.36
2510 2772 2.099621 GACGTACGCATAACAGACTCG 58.900 52.381 16.72 0.00 0.00 4.18
2511 2773 1.202110 ACGTACGCATAACAGACTCGG 60.202 52.381 16.72 0.00 0.00 4.63
2512 2774 1.202110 CGTACGCATAACAGACTCGGT 60.202 52.381 0.52 0.00 0.00 4.69
2513 2775 2.030823 CGTACGCATAACAGACTCGGTA 59.969 50.000 0.52 0.00 0.00 4.02
2514 2776 2.556534 ACGCATAACAGACTCGGTAC 57.443 50.000 0.00 0.00 0.00 3.34
2515 2777 1.133790 ACGCATAACAGACTCGGTACC 59.866 52.381 0.16 0.16 0.00 3.34
2516 2778 1.404391 CGCATAACAGACTCGGTACCT 59.596 52.381 10.90 0.00 0.00 3.08
2517 2779 2.615447 CGCATAACAGACTCGGTACCTA 59.385 50.000 10.90 0.00 0.00 3.08
2518 2780 3.303857 CGCATAACAGACTCGGTACCTAG 60.304 52.174 11.79 11.79 0.00 3.02
2519 2781 3.004524 GCATAACAGACTCGGTACCTAGG 59.995 52.174 17.18 7.41 0.00 3.02
2521 2783 2.416680 ACAGACTCGGTACCTAGGTC 57.583 55.000 20.32 16.54 0.00 3.85
2522 2784 1.632409 ACAGACTCGGTACCTAGGTCA 59.368 52.381 20.32 2.04 0.00 4.02
2524 2786 3.288964 CAGACTCGGTACCTAGGTCAAT 58.711 50.000 20.32 0.00 0.00 2.57
2525 2787 3.066900 CAGACTCGGTACCTAGGTCAATG 59.933 52.174 20.32 7.36 0.00 2.82
2526 2788 2.361438 GACTCGGTACCTAGGTCAATGG 59.639 54.545 20.32 9.92 0.00 3.16
2527 2789 1.687123 CTCGGTACCTAGGTCAATGGG 59.313 57.143 20.32 3.07 0.00 4.00
2528 2790 0.106149 CGGTACCTAGGTCAATGGGC 59.894 60.000 20.32 1.20 0.00 5.36
2529 2791 1.508256 GGTACCTAGGTCAATGGGCT 58.492 55.000 20.32 0.00 0.00 5.19
2530 2792 1.416772 GGTACCTAGGTCAATGGGCTC 59.583 57.143 20.32 0.00 0.00 4.70
2531 2793 2.116238 GTACCTAGGTCAATGGGCTCA 58.884 52.381 20.32 0.00 0.00 4.26
2533 2795 1.207791 CCTAGGTCAATGGGCTCAGT 58.792 55.000 0.00 0.00 0.00 3.41
2534 2796 1.134280 CCTAGGTCAATGGGCTCAGTG 60.134 57.143 7.96 7.96 40.01 3.66
2536 2798 0.842030 AGGTCAATGGGCTCAGTGGA 60.842 55.000 15.06 0.00 39.23 4.02
2537 2799 0.393537 GGTCAATGGGCTCAGTGGAG 60.394 60.000 15.06 0.00 44.33 3.86
2538 2800 0.615331 GTCAATGGGCTCAGTGGAGA 59.385 55.000 15.06 0.00 44.26 3.71
2539 2801 1.003580 GTCAATGGGCTCAGTGGAGAA 59.996 52.381 15.06 0.00 44.26 2.87
2541 2803 2.309755 TCAATGGGCTCAGTGGAGAATT 59.690 45.455 15.06 0.00 44.26 2.17
2542 2804 2.426024 CAATGGGCTCAGTGGAGAATTG 59.574 50.000 6.01 0.00 44.26 2.32
2544 2806 1.372087 GGGCTCAGTGGAGAATTGCG 61.372 60.000 0.00 0.00 44.26 4.85
2545 2807 0.674895 GGCTCAGTGGAGAATTGCGT 60.675 55.000 0.00 0.00 44.26 5.24
2546 2808 1.160137 GCTCAGTGGAGAATTGCGTT 58.840 50.000 0.00 0.00 44.26 4.84
2548 2810 2.094417 GCTCAGTGGAGAATTGCGTTAC 59.906 50.000 0.00 0.00 44.26 2.50
2549 2811 3.589988 CTCAGTGGAGAATTGCGTTACT 58.410 45.455 0.00 0.00 44.26 2.24
2550 2812 3.997021 CTCAGTGGAGAATTGCGTTACTT 59.003 43.478 0.00 0.00 44.26 2.24
2551 2813 4.385825 TCAGTGGAGAATTGCGTTACTTT 58.614 39.130 0.00 0.00 0.00 2.66
2552 2814 4.819630 TCAGTGGAGAATTGCGTTACTTTT 59.180 37.500 0.00 0.00 0.00 2.27
2553 2815 5.298276 TCAGTGGAGAATTGCGTTACTTTTT 59.702 36.000 0.00 0.00 0.00 1.94
2635 3256 5.391060 CTACAGCCGTAGCATAAAAGAAC 57.609 43.478 0.00 0.00 43.56 3.01
2636 3257 3.007635 ACAGCCGTAGCATAAAAGAACC 58.992 45.455 0.00 0.00 43.56 3.62
2637 3258 3.270877 CAGCCGTAGCATAAAAGAACCT 58.729 45.455 0.00 0.00 43.56 3.50
2638 3259 3.689649 CAGCCGTAGCATAAAAGAACCTT 59.310 43.478 0.00 0.00 43.56 3.50
2656 3285 5.046910 ACCTTGCATTATTCAGTGAAACG 57.953 39.130 10.14 0.02 45.86 3.60
2659 3288 2.816672 TGCATTATTCAGTGAAACGGCA 59.183 40.909 10.14 13.94 45.86 5.69
2665 3294 1.305201 TCAGTGAAACGGCAGGAAAC 58.695 50.000 0.00 0.00 45.86 2.78
2669 3298 3.263503 GAAACGGCAGGAAACGCCC 62.264 63.158 0.00 0.00 43.93 6.13
2678 3307 0.838987 AGGAAACGCCCCTGAAGGTA 60.839 55.000 0.00 0.00 37.37 3.08
2681 3310 2.232399 GAAACGCCCCTGAAGGTAAAA 58.768 47.619 0.00 0.00 0.00 1.52
2682 3311 1.905637 AACGCCCCTGAAGGTAAAAG 58.094 50.000 0.00 0.00 0.00 2.27
2687 3316 3.057526 CGCCCCTGAAGGTAAAAGAAAAG 60.058 47.826 0.00 0.00 0.00 2.27
2691 3320 6.068670 CCCCTGAAGGTAAAAGAAAAGAGAA 58.931 40.000 0.00 0.00 0.00 2.87
2724 3353 6.108015 ACACTTTTACCACGTTTCAGTTAGA 58.892 36.000 0.00 0.00 0.00 2.10
2731 3363 3.673809 CCACGTTTCAGTTAGACAGTAGC 59.326 47.826 0.00 0.00 0.00 3.58
2797 3429 7.436970 CCATATTACTACATGACGCTGTACAAA 59.563 37.037 0.00 0.00 0.00 2.83
2802 3434 4.928661 ACATGACGCTGTACAAAATCTC 57.071 40.909 0.00 0.00 0.00 2.75
2803 3435 4.314961 ACATGACGCTGTACAAAATCTCA 58.685 39.130 0.00 0.00 0.00 3.27
2804 3436 4.152402 ACATGACGCTGTACAAAATCTCAC 59.848 41.667 0.00 0.00 0.00 3.51
2806 3438 1.459592 ACGCTGTACAAAATCTCACGC 59.540 47.619 0.00 0.00 0.00 5.34
2811 3443 1.659098 GTACAAAATCTCACGCGGAGG 59.341 52.381 19.88 6.56 44.19 4.30
2829 3463 5.416326 GCGGAGGAATAGAGTACATATCTGT 59.584 44.000 0.00 0.00 39.49 3.41
2831 3465 7.201661 GCGGAGGAATAGAGTACATATCTGTAG 60.202 44.444 0.00 0.00 38.51 2.74
2850 3484 5.660460 TGTAGAGTGTTATTCATGCGTGAT 58.340 37.500 9.96 2.95 33.56 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 7.600752 GCGGCTATTTCTATGAGAAGAATTAGT 59.399 37.037 13.09 0.00 39.45 2.24
17 18 7.816995 AGCGGCTATTTCTATGAGAAGAATTAG 59.183 37.037 0.00 9.54 39.84 1.73
18 19 7.600375 CAGCGGCTATTTCTATGAGAAGAATTA 59.400 37.037 0.26 0.00 35.37 1.40
19 20 6.426328 CAGCGGCTATTTCTATGAGAAGAATT 59.574 38.462 0.26 0.00 35.37 2.17
20 21 5.931146 CAGCGGCTATTTCTATGAGAAGAAT 59.069 40.000 0.26 0.00 35.37 2.40
21 22 5.163405 ACAGCGGCTATTTCTATGAGAAGAA 60.163 40.000 0.26 0.00 35.37 2.52
22 23 4.342378 ACAGCGGCTATTTCTATGAGAAGA 59.658 41.667 0.26 0.00 35.37 2.87
23 24 4.626042 ACAGCGGCTATTTCTATGAGAAG 58.374 43.478 0.26 0.00 35.37 2.85
24 25 4.501571 GGACAGCGGCTATTTCTATGAGAA 60.502 45.833 0.26 0.00 31.28 2.87
25 26 3.005897 GGACAGCGGCTATTTCTATGAGA 59.994 47.826 0.26 0.00 0.00 3.27
26 27 3.243873 TGGACAGCGGCTATTTCTATGAG 60.244 47.826 0.26 0.00 0.00 2.90
27 28 2.698274 TGGACAGCGGCTATTTCTATGA 59.302 45.455 0.26 0.00 0.00 2.15
28 29 3.062763 CTGGACAGCGGCTATTTCTATG 58.937 50.000 0.26 0.00 0.00 2.23
29 30 2.700897 ACTGGACAGCGGCTATTTCTAT 59.299 45.455 0.26 0.00 0.00 1.98
30 31 2.108168 ACTGGACAGCGGCTATTTCTA 58.892 47.619 0.26 0.00 0.00 2.10
31 32 0.905357 ACTGGACAGCGGCTATTTCT 59.095 50.000 0.26 0.00 0.00 2.52
32 33 1.398390 CAACTGGACAGCGGCTATTTC 59.602 52.381 0.26 0.00 0.00 2.17
33 34 1.003118 TCAACTGGACAGCGGCTATTT 59.997 47.619 0.26 0.00 0.00 1.40
34 35 0.613260 TCAACTGGACAGCGGCTATT 59.387 50.000 0.26 0.00 0.00 1.73
35 36 0.176680 CTCAACTGGACAGCGGCTAT 59.823 55.000 0.26 0.00 0.00 2.97
36 37 1.185618 ACTCAACTGGACAGCGGCTA 61.186 55.000 0.26 0.00 0.00 3.93
37 38 2.345244 CTCAACTGGACAGCGGCT 59.655 61.111 0.00 0.00 0.00 5.52
38 39 2.029844 GACTCAACTGGACAGCGGC 61.030 63.158 0.00 0.00 0.00 6.53
39 40 1.374758 GGACTCAACTGGACAGCGG 60.375 63.158 0.00 0.00 0.00 5.52
40 41 0.036952 ATGGACTCAACTGGACAGCG 60.037 55.000 0.00 0.00 0.00 5.18
41 42 1.277557 AGATGGACTCAACTGGACAGC 59.722 52.381 0.00 0.00 0.00 4.40
42 43 3.594134 GAAGATGGACTCAACTGGACAG 58.406 50.000 0.00 0.00 0.00 3.51
43 44 2.303022 GGAAGATGGACTCAACTGGACA 59.697 50.000 0.00 0.00 0.00 4.02
44 45 2.303022 TGGAAGATGGACTCAACTGGAC 59.697 50.000 0.00 0.00 0.00 4.02
45 46 2.619931 TGGAAGATGGACTCAACTGGA 58.380 47.619 0.00 0.00 0.00 3.86
46 47 3.423539 TTGGAAGATGGACTCAACTGG 57.576 47.619 0.00 0.00 0.00 4.00
47 48 4.392940 AGTTTGGAAGATGGACTCAACTG 58.607 43.478 0.00 0.00 0.00 3.16
48 49 4.349342 AGAGTTTGGAAGATGGACTCAACT 59.651 41.667 4.83 0.00 39.27 3.16
49 50 4.646572 AGAGTTTGGAAGATGGACTCAAC 58.353 43.478 4.83 0.00 39.27 3.18
50 51 4.982241 AGAGTTTGGAAGATGGACTCAA 57.018 40.909 4.83 0.00 39.27 3.02
51 52 4.982241 AAGAGTTTGGAAGATGGACTCA 57.018 40.909 4.83 0.00 39.27 3.41
52 53 4.083057 GCAAAGAGTTTGGAAGATGGACTC 60.083 45.833 1.80 0.00 40.94 3.36
53 54 3.823304 GCAAAGAGTTTGGAAGATGGACT 59.177 43.478 1.80 0.00 40.94 3.85
54 55 3.823304 AGCAAAGAGTTTGGAAGATGGAC 59.177 43.478 1.80 0.00 40.94 4.02
55 56 4.074970 GAGCAAAGAGTTTGGAAGATGGA 58.925 43.478 1.80 0.00 40.94 3.41
56 57 3.822735 TGAGCAAAGAGTTTGGAAGATGG 59.177 43.478 1.80 0.00 40.94 3.51
57 58 4.276678 TGTGAGCAAAGAGTTTGGAAGATG 59.723 41.667 1.80 0.00 40.94 2.90
58 59 4.464008 TGTGAGCAAAGAGTTTGGAAGAT 58.536 39.130 1.80 0.00 40.94 2.40
59 60 3.879295 CTGTGAGCAAAGAGTTTGGAAGA 59.121 43.478 1.80 0.00 40.94 2.87
60 61 3.004106 CCTGTGAGCAAAGAGTTTGGAAG 59.996 47.826 1.80 0.00 40.94 3.46
61 62 2.951642 CCTGTGAGCAAAGAGTTTGGAA 59.048 45.455 1.80 0.00 40.94 3.53
62 63 2.575532 CCTGTGAGCAAAGAGTTTGGA 58.424 47.619 1.80 0.00 40.94 3.53
63 64 1.610522 CCCTGTGAGCAAAGAGTTTGG 59.389 52.381 1.80 0.00 40.94 3.28
64 65 1.000938 GCCCTGTGAGCAAAGAGTTTG 60.001 52.381 0.00 0.00 43.44 2.93
65 66 1.133668 AGCCCTGTGAGCAAAGAGTTT 60.134 47.619 0.00 0.00 0.00 2.66
66 67 0.475906 AGCCCTGTGAGCAAAGAGTT 59.524 50.000 0.00 0.00 0.00 3.01
67 68 1.352083 TAGCCCTGTGAGCAAAGAGT 58.648 50.000 0.00 0.00 0.00 3.24
68 69 2.286872 CATAGCCCTGTGAGCAAAGAG 58.713 52.381 0.00 0.00 0.00 2.85
69 70 1.630369 ACATAGCCCTGTGAGCAAAGA 59.370 47.619 0.00 0.00 0.00 2.52
70 71 2.119801 ACATAGCCCTGTGAGCAAAG 57.880 50.000 0.00 0.00 0.00 2.77
71 72 3.712016 TTACATAGCCCTGTGAGCAAA 57.288 42.857 0.00 0.00 0.00 3.68
72 73 3.199727 TGATTACATAGCCCTGTGAGCAA 59.800 43.478 0.00 0.00 29.53 3.91
73 74 2.771372 TGATTACATAGCCCTGTGAGCA 59.229 45.455 0.00 0.00 29.90 4.26
74 75 3.134458 GTGATTACATAGCCCTGTGAGC 58.866 50.000 0.00 0.00 0.00 4.26
75 76 4.141846 ACAGTGATTACATAGCCCTGTGAG 60.142 45.833 0.00 0.00 30.77 3.51
76 77 3.774766 ACAGTGATTACATAGCCCTGTGA 59.225 43.478 0.00 0.00 30.77 3.58
77 78 4.142609 ACAGTGATTACATAGCCCTGTG 57.857 45.455 0.00 0.00 30.77 3.66
78 79 4.019321 ACAACAGTGATTACATAGCCCTGT 60.019 41.667 0.00 0.00 32.40 4.00
79 80 4.517285 ACAACAGTGATTACATAGCCCTG 58.483 43.478 0.00 0.00 0.00 4.45
80 81 4.844349 ACAACAGTGATTACATAGCCCT 57.156 40.909 0.00 0.00 0.00 5.19
81 82 5.424757 TGTACAACAGTGATTACATAGCCC 58.575 41.667 0.00 0.00 0.00 5.19
82 83 6.978343 TTGTACAACAGTGATTACATAGCC 57.022 37.500 3.59 0.00 0.00 3.93
83 84 7.974675 ACATTGTACAACAGTGATTACATAGC 58.025 34.615 11.22 0.00 37.96 2.97
84 85 9.371136 AGACATTGTACAACAGTGATTACATAG 57.629 33.333 17.42 0.40 37.96 2.23
86 87 9.890629 ATAGACATTGTACAACAGTGATTACAT 57.109 29.630 17.42 0.00 37.96 2.29
87 88 9.150348 CATAGACATTGTACAACAGTGATTACA 57.850 33.333 17.42 0.00 37.96 2.41
88 89 8.604035 CCATAGACATTGTACAACAGTGATTAC 58.396 37.037 17.42 5.70 37.96 1.89
89 90 7.768582 CCCATAGACATTGTACAACAGTGATTA 59.231 37.037 17.42 8.50 37.96 1.75
90 91 6.599244 CCCATAGACATTGTACAACAGTGATT 59.401 38.462 17.42 6.96 37.96 2.57
91 92 6.070251 TCCCATAGACATTGTACAACAGTGAT 60.070 38.462 17.42 9.52 37.96 3.06
92 93 5.247337 TCCCATAGACATTGTACAACAGTGA 59.753 40.000 17.42 7.98 37.96 3.41
93 94 5.487433 TCCCATAGACATTGTACAACAGTG 58.513 41.667 17.42 12.02 41.01 3.66
94 95 5.755409 TCCCATAGACATTGTACAACAGT 57.245 39.130 11.22 12.65 0.00 3.55
95 96 6.348498 TCATCCCATAGACATTGTACAACAG 58.652 40.000 11.22 9.31 0.00 3.16
96 97 6.306643 TCATCCCATAGACATTGTACAACA 57.693 37.500 11.22 0.00 0.00 3.33
97 98 7.255242 CCATTCATCCCATAGACATTGTACAAC 60.255 40.741 11.22 0.00 0.00 3.32
98 99 6.772233 CCATTCATCCCATAGACATTGTACAA 59.228 38.462 11.41 11.41 0.00 2.41
99 100 6.101005 TCCATTCATCCCATAGACATTGTACA 59.899 38.462 0.00 0.00 0.00 2.90
100 101 6.533730 TCCATTCATCCCATAGACATTGTAC 58.466 40.000 0.00 0.00 0.00 2.90
101 102 6.762077 TCCATTCATCCCATAGACATTGTA 57.238 37.500 0.00 0.00 0.00 2.41
102 103 5.651612 TCCATTCATCCCATAGACATTGT 57.348 39.130 0.00 0.00 0.00 2.71
103 104 8.818622 ATATTCCATTCATCCCATAGACATTG 57.181 34.615 0.00 0.00 0.00 2.82
104 105 9.251440 CAATATTCCATTCATCCCATAGACATT 57.749 33.333 0.00 0.00 0.00 2.71
105 106 7.837689 CCAATATTCCATTCATCCCATAGACAT 59.162 37.037 0.00 0.00 0.00 3.06
106 107 7.177184 CCAATATTCCATTCATCCCATAGACA 58.823 38.462 0.00 0.00 0.00 3.41
107 108 7.121759 CACCAATATTCCATTCATCCCATAGAC 59.878 40.741 0.00 0.00 0.00 2.59
108 109 7.177184 CACCAATATTCCATTCATCCCATAGA 58.823 38.462 0.00 0.00 0.00 1.98
109 110 6.127535 GCACCAATATTCCATTCATCCCATAG 60.128 42.308 0.00 0.00 0.00 2.23
110 111 5.716228 GCACCAATATTCCATTCATCCCATA 59.284 40.000 0.00 0.00 0.00 2.74
111 112 4.529377 GCACCAATATTCCATTCATCCCAT 59.471 41.667 0.00 0.00 0.00 4.00
112 113 3.896888 GCACCAATATTCCATTCATCCCA 59.103 43.478 0.00 0.00 0.00 4.37
113 114 3.259123 GGCACCAATATTCCATTCATCCC 59.741 47.826 0.00 0.00 0.00 3.85
114 115 4.154942 AGGCACCAATATTCCATTCATCC 58.845 43.478 0.00 0.00 0.00 3.51
115 116 5.048224 CAGAGGCACCAATATTCCATTCATC 60.048 44.000 0.00 0.00 0.00 2.92
116 117 4.831155 CAGAGGCACCAATATTCCATTCAT 59.169 41.667 0.00 0.00 0.00 2.57
117 118 4.209538 CAGAGGCACCAATATTCCATTCA 58.790 43.478 0.00 0.00 0.00 2.57
118 119 3.571401 CCAGAGGCACCAATATTCCATTC 59.429 47.826 0.00 0.00 0.00 2.67
119 120 3.052642 ACCAGAGGCACCAATATTCCATT 60.053 43.478 0.00 0.00 0.00 3.16
120 121 2.515429 ACCAGAGGCACCAATATTCCAT 59.485 45.455 0.00 0.00 0.00 3.41
121 122 1.922447 ACCAGAGGCACCAATATTCCA 59.078 47.619 0.00 0.00 0.00 3.53
122 123 2.301346 CACCAGAGGCACCAATATTCC 58.699 52.381 0.00 0.00 0.00 3.01
123 124 1.678101 GCACCAGAGGCACCAATATTC 59.322 52.381 0.00 0.00 0.00 1.75
124 125 1.686115 GGCACCAGAGGCACCAATATT 60.686 52.381 0.00 0.00 0.00 1.28
125 126 0.106519 GGCACCAGAGGCACCAATAT 60.107 55.000 0.00 0.00 0.00 1.28
126 127 1.302949 GGCACCAGAGGCACCAATA 59.697 57.895 0.00 0.00 0.00 1.90
127 128 2.036256 GGCACCAGAGGCACCAAT 59.964 61.111 0.00 0.00 0.00 3.16
140 141 3.535280 TTTTTGAACAAAGAGGGGCAC 57.465 42.857 0.46 0.00 0.00 5.01
178 179 4.865761 GATCCCAGCACGCGCGTA 62.866 66.667 37.24 20.15 45.49 4.42
181 182 4.819761 TCAGATCCCAGCACGCGC 62.820 66.667 5.73 0.00 38.99 6.86
182 183 1.298157 TTTTCAGATCCCAGCACGCG 61.298 55.000 3.53 3.53 0.00 6.01
183 184 1.098050 ATTTTCAGATCCCAGCACGC 58.902 50.000 0.00 0.00 0.00 5.34
184 185 4.963276 TTTATTTTCAGATCCCAGCACG 57.037 40.909 0.00 0.00 0.00 5.34
185 186 5.594926 CCATTTATTTTCAGATCCCAGCAC 58.405 41.667 0.00 0.00 0.00 4.40
186 187 4.099881 GCCATTTATTTTCAGATCCCAGCA 59.900 41.667 0.00 0.00 0.00 4.41
187 188 4.625028 GCCATTTATTTTCAGATCCCAGC 58.375 43.478 0.00 0.00 0.00 4.85
188 189 4.339247 ACGCCATTTATTTTCAGATCCCAG 59.661 41.667 0.00 0.00 0.00 4.45
189 190 4.277476 ACGCCATTTATTTTCAGATCCCA 58.723 39.130 0.00 0.00 0.00 4.37
190 191 4.580580 AGACGCCATTTATTTTCAGATCCC 59.419 41.667 0.00 0.00 0.00 3.85
191 192 5.529060 AGAGACGCCATTTATTTTCAGATCC 59.471 40.000 0.00 0.00 0.00 3.36
192 193 6.293135 GGAGAGACGCCATTTATTTTCAGATC 60.293 42.308 0.00 0.00 0.00 2.75
193 194 5.529060 GGAGAGACGCCATTTATTTTCAGAT 59.471 40.000 0.00 0.00 0.00 2.90
194 195 4.876107 GGAGAGACGCCATTTATTTTCAGA 59.124 41.667 0.00 0.00 0.00 3.27
195 196 4.878397 AGGAGAGACGCCATTTATTTTCAG 59.122 41.667 0.00 0.00 0.00 3.02
196 197 4.843728 AGGAGAGACGCCATTTATTTTCA 58.156 39.130 0.00 0.00 0.00 2.69
197 198 4.876107 TGAGGAGAGACGCCATTTATTTTC 59.124 41.667 0.00 0.00 0.00 2.29
198 199 4.843728 TGAGGAGAGACGCCATTTATTTT 58.156 39.130 0.00 0.00 0.00 1.82
199 200 4.446371 CTGAGGAGAGACGCCATTTATTT 58.554 43.478 0.00 0.00 0.00 1.40
200 201 3.181461 CCTGAGGAGAGACGCCATTTATT 60.181 47.826 0.00 0.00 0.00 1.40
201 202 2.366916 CCTGAGGAGAGACGCCATTTAT 59.633 50.000 0.00 0.00 0.00 1.40
202 203 1.757118 CCTGAGGAGAGACGCCATTTA 59.243 52.381 0.00 0.00 0.00 1.40
203 204 0.539051 CCTGAGGAGAGACGCCATTT 59.461 55.000 0.00 0.00 0.00 2.32
204 205 0.616111 ACCTGAGGAGAGACGCCATT 60.616 55.000 4.99 0.00 0.00 3.16
205 206 1.000993 ACCTGAGGAGAGACGCCAT 59.999 57.895 4.99 0.00 0.00 4.40
206 207 1.679305 GACCTGAGGAGAGACGCCA 60.679 63.158 4.99 0.00 0.00 5.69
207 208 2.419739 GGACCTGAGGAGAGACGCC 61.420 68.421 4.99 0.00 0.00 5.68
208 209 2.766400 CGGACCTGAGGAGAGACGC 61.766 68.421 4.99 0.00 0.00 5.19
209 210 2.115911 CCGGACCTGAGGAGAGACG 61.116 68.421 4.99 1.73 0.00 4.18
210 211 1.000646 ACCGGACCTGAGGAGAGAC 60.001 63.158 9.46 0.00 0.00 3.36
211 212 1.303615 GACCGGACCTGAGGAGAGA 59.696 63.158 9.46 0.00 0.00 3.10
212 213 0.612174 TTGACCGGACCTGAGGAGAG 60.612 60.000 9.46 0.00 0.00 3.20
213 214 0.612174 CTTGACCGGACCTGAGGAGA 60.612 60.000 9.46 0.00 0.00 3.71
214 215 1.893786 CTTGACCGGACCTGAGGAG 59.106 63.158 9.46 0.00 0.00 3.69
215 216 2.283529 GCTTGACCGGACCTGAGGA 61.284 63.158 9.46 0.00 0.00 3.71
216 217 2.266055 GCTTGACCGGACCTGAGG 59.734 66.667 9.46 0.00 0.00 3.86
217 218 2.125912 CGCTTGACCGGACCTGAG 60.126 66.667 9.46 1.20 0.00 3.35
230 231 3.808218 TTTCTGGCCTTGGCCGCTT 62.808 57.895 23.81 0.00 0.00 4.68
231 232 4.284550 TTTCTGGCCTTGGCCGCT 62.285 61.111 23.81 0.00 0.00 5.52
232 233 3.752339 CTTTCTGGCCTTGGCCGC 61.752 66.667 23.81 3.72 0.00 6.53
233 234 1.903404 AACTTTCTGGCCTTGGCCG 60.903 57.895 23.81 18.23 0.00 6.13
234 235 1.667722 CAACTTTCTGGCCTTGGCC 59.332 57.895 22.91 22.91 0.00 5.36
235 236 1.667722 CCAACTTTCTGGCCTTGGC 59.332 57.895 3.32 2.49 0.00 4.52
236 237 1.187567 CCCCAACTTTCTGGCCTTGG 61.188 60.000 11.38 11.38 34.88 3.61
237 238 0.178964 TCCCCAACTTTCTGGCCTTG 60.179 55.000 3.32 0.00 34.88 3.61
238 239 0.786435 ATCCCCAACTTTCTGGCCTT 59.214 50.000 3.32 0.00 34.88 4.35
239 240 0.040204 CATCCCCAACTTTCTGGCCT 59.960 55.000 3.32 0.00 34.88 5.19
285 286 0.392595 GGGTCCCAAAGCGAACCTAG 60.393 60.000 1.78 0.00 33.99 3.02
287 288 2.434774 GGGTCCCAAAGCGAACCT 59.565 61.111 1.78 0.00 33.99 3.50
293 295 2.269241 CCTCTCGGGTCCCAAAGC 59.731 66.667 9.12 0.00 0.00 3.51
392 402 4.808649 GGAAAGCGTCCTACTCCG 57.191 61.111 2.43 0.00 43.98 4.63
438 450 3.282745 CTCTCGTGGTGGTCGTGGG 62.283 68.421 0.00 0.00 0.00 4.61
439 451 2.258591 CTCTCGTGGTGGTCGTGG 59.741 66.667 0.00 0.00 0.00 4.94
440 452 2.430921 GCTCTCGTGGTGGTCGTG 60.431 66.667 0.00 0.00 0.00 4.35
441 453 3.681835 GGCTCTCGTGGTGGTCGT 61.682 66.667 0.00 0.00 0.00 4.34
442 454 4.436998 GGGCTCTCGTGGTGGTCG 62.437 72.222 0.00 0.00 0.00 4.79
443 455 4.436998 CGGGCTCTCGTGGTGGTC 62.437 72.222 0.00 0.00 0.00 4.02
465 477 1.456518 TCAGGAGATGGAGCGGAGG 60.457 63.158 0.00 0.00 0.00 4.30
510 522 2.896428 GATTACGCGCGCTTGGTTGG 62.896 60.000 32.58 14.15 0.00 3.77
511 523 1.580132 GATTACGCGCGCTTGGTTG 60.580 57.895 32.58 14.95 0.00 3.77
512 524 2.746803 GGATTACGCGCGCTTGGTT 61.747 57.895 32.58 12.24 0.00 3.67
530 542 4.323477 TCGTGGGGTTCAAGGGCG 62.323 66.667 0.00 0.00 0.00 6.13
533 545 2.358247 CGGTCGTGGGGTTCAAGG 60.358 66.667 0.00 0.00 0.00 3.61
539 558 0.251073 CTTAATTCCGGTCGTGGGGT 59.749 55.000 0.00 0.00 0.00 4.95
572 591 1.410737 CTAGTAATGCGTGCGTGCGT 61.411 55.000 3.11 0.00 37.81 5.24
573 592 1.269810 CTAGTAATGCGTGCGTGCG 59.730 57.895 0.00 0.00 37.81 5.34
574 593 0.719465 AACTAGTAATGCGTGCGTGC 59.281 50.000 0.00 0.00 0.00 5.34
575 594 1.989864 TGAACTAGTAATGCGTGCGTG 59.010 47.619 0.00 0.00 0.00 5.34
576 595 2.357327 TGAACTAGTAATGCGTGCGT 57.643 45.000 0.00 0.00 0.00 5.24
577 596 3.925688 AATGAACTAGTAATGCGTGCG 57.074 42.857 0.00 0.00 0.00 5.34
589 608 5.046159 AGGGTTACGGTGATGAAATGAACTA 60.046 40.000 0.00 0.00 0.00 2.24
590 609 4.007659 GGGTTACGGTGATGAAATGAACT 58.992 43.478 0.00 0.00 0.00 3.01
591 610 4.007659 AGGGTTACGGTGATGAAATGAAC 58.992 43.478 0.00 0.00 0.00 3.18
592 611 4.295141 AGGGTTACGGTGATGAAATGAA 57.705 40.909 0.00 0.00 0.00 2.57
593 612 3.992943 AGGGTTACGGTGATGAAATGA 57.007 42.857 0.00 0.00 0.00 2.57
594 613 4.334481 GGTTAGGGTTACGGTGATGAAATG 59.666 45.833 0.00 0.00 0.00 2.32
595 614 4.520179 GGTTAGGGTTACGGTGATGAAAT 58.480 43.478 0.00 0.00 0.00 2.17
596 615 3.307621 GGGTTAGGGTTACGGTGATGAAA 60.308 47.826 0.00 0.00 0.00 2.69
685 752 1.154488 CGTGCGTGTGATTTTCCCG 60.154 57.895 0.00 0.00 0.00 5.14
687 754 1.527736 TGTACGTGCGTGTGATTTTCC 59.472 47.619 7.55 0.00 0.00 3.13
694 761 2.218987 TGTAAATGTGTACGTGCGTGTG 59.781 45.455 7.55 0.00 0.00 3.82
695 762 2.219216 GTGTAAATGTGTACGTGCGTGT 59.781 45.455 7.55 0.00 0.00 4.49
702 769 1.201877 GCGGCAGTGTAAATGTGTACG 60.202 52.381 0.00 0.00 32.28 3.67
703 770 2.073816 AGCGGCAGTGTAAATGTGTAC 58.926 47.619 1.45 0.00 32.28 2.90
736 808 3.296854 TGCGAAGACAGTAGGATATGGT 58.703 45.455 0.00 0.00 0.00 3.55
795 914 1.680735 GCCTGACGACATCTCTCTGAT 59.319 52.381 0.00 0.00 35.40 2.90
806 925 3.491267 GCTCATTAGTATTGCCTGACGAC 59.509 47.826 0.00 0.00 0.00 4.34
817 936 4.445718 CGAAATCTGCACGCTCATTAGTAT 59.554 41.667 0.00 0.00 0.00 2.12
818 937 3.796717 CGAAATCTGCACGCTCATTAGTA 59.203 43.478 0.00 0.00 0.00 1.82
819 938 2.604914 CGAAATCTGCACGCTCATTAGT 59.395 45.455 0.00 0.00 0.00 2.24
820 939 2.860136 TCGAAATCTGCACGCTCATTAG 59.140 45.455 0.00 0.00 0.00 1.73
852 974 0.981183 TACAGTTTGCATCTCGGGGT 59.019 50.000 0.00 0.00 0.00 4.95
889 1019 1.136336 CGTACAGGAAAGCTTTGCGTC 60.136 52.381 22.84 13.86 33.38 5.19
935 1065 3.823330 CTCGGGCTAGCCGTTCGT 61.823 66.667 27.24 0.00 36.85 3.85
988 1121 3.818787 GGCGATGGTTGCTGCCTG 61.819 66.667 0.00 0.00 44.16 4.85
991 1124 4.120331 GGTGGCGATGGTTGCTGC 62.120 66.667 0.00 0.00 0.00 5.25
1001 1134 2.347114 CAGTGATGGTGGTGGCGA 59.653 61.111 0.00 0.00 0.00 5.54
1003 1136 2.629656 GCACAGTGATGGTGGTGGC 61.630 63.158 4.15 0.00 36.76 5.01
1041 1174 5.299279 TCCCTCTCTTTGTCACATTCAAAAC 59.701 40.000 0.00 0.00 34.96 2.43
1249 1406 1.226323 CGAGAACTGGTACTCGCCG 60.226 63.158 0.00 0.00 46.54 6.46
1463 1635 4.688419 GCCGTCGTCGTCAACCGA 62.688 66.667 0.71 0.00 45.00 4.69
1467 1639 4.394078 CCTCGCCGTCGTCGTCAA 62.394 66.667 0.71 0.00 36.96 3.18
1516 1703 0.900647 CCTCGAACTCCACCTCCACT 60.901 60.000 0.00 0.00 0.00 4.00
1524 1711 2.678934 CGTCCCCCTCGAACTCCA 60.679 66.667 0.00 0.00 0.00 3.86
1681 1892 4.872691 AGCGACAATTCTACCAATGAAGAG 59.127 41.667 0.00 0.00 0.00 2.85
1688 1899 3.887621 AGCTAGCGACAATTCTACCAA 57.112 42.857 9.55 0.00 0.00 3.67
1761 1974 8.648097 CATGATACTAGAACACTACAACAACAC 58.352 37.037 0.00 0.00 0.00 3.32
1762 1975 8.364894 ACATGATACTAGAACACTACAACAACA 58.635 33.333 0.00 0.00 0.00 3.33
1765 1978 8.581578 TGAACATGATACTAGAACACTACAACA 58.418 33.333 0.00 0.00 0.00 3.33
1766 1979 8.861101 GTGAACATGATACTAGAACACTACAAC 58.139 37.037 0.00 0.00 0.00 3.32
1768 1981 8.349568 AGTGAACATGATACTAGAACACTACA 57.650 34.615 0.00 0.00 34.95 2.74
1769 1982 7.640630 CGAGTGAACATGATACTAGAACACTAC 59.359 40.741 0.00 0.00 36.45 2.73
1771 1984 6.151312 ACGAGTGAACATGATACTAGAACACT 59.849 38.462 0.00 0.00 38.48 3.55
1772 1985 6.251589 CACGAGTGAACATGATACTAGAACAC 59.748 42.308 0.00 0.00 0.00 3.32
1774 1987 6.323266 ACACGAGTGAACATGATACTAGAAC 58.677 40.000 10.50 0.00 0.00 3.01
1775 1988 6.510879 ACACGAGTGAACATGATACTAGAA 57.489 37.500 10.50 0.00 0.00 2.10
1835 2053 4.236935 GGCAACATTTATCAACACCACAG 58.763 43.478 0.00 0.00 0.00 3.66
1907 2129 4.088762 GATGCGTGGTGTGGCGTG 62.089 66.667 0.00 0.00 0.00 5.34
1982 2212 4.928615 CACGATTTGCTCTCTTCTTCTTCT 59.071 41.667 0.00 0.00 0.00 2.85
1983 2213 4.092675 CCACGATTTGCTCTCTTCTTCTTC 59.907 45.833 0.00 0.00 0.00 2.87
1985 2215 3.594134 CCACGATTTGCTCTCTTCTTCT 58.406 45.455 0.00 0.00 0.00 2.85
1986 2216 2.675348 CCCACGATTTGCTCTCTTCTTC 59.325 50.000 0.00 0.00 0.00 2.87
1988 2218 1.902508 TCCCACGATTTGCTCTCTTCT 59.097 47.619 0.00 0.00 0.00 2.85
1989 2219 2.386661 TCCCACGATTTGCTCTCTTC 57.613 50.000 0.00 0.00 0.00 2.87
1990 2220 2.859165 TTCCCACGATTTGCTCTCTT 57.141 45.000 0.00 0.00 0.00 2.85
2003 2259 1.001048 GTTTACGGCCAACTTTCCCAC 60.001 52.381 2.24 0.00 0.00 4.61
2058 2314 2.431954 AACAATGGGAGATGAGGCAG 57.568 50.000 0.00 0.00 0.00 4.85
2064 2320 7.714813 ACTTTTTGGTTTTAACAATGGGAGATG 59.285 33.333 0.00 0.00 0.00 2.90
2083 2339 1.464687 CGCTCCTCGATGCACTTTTTG 60.465 52.381 0.00 0.00 41.67 2.44
2084 2340 0.798776 CGCTCCTCGATGCACTTTTT 59.201 50.000 0.00 0.00 41.67 1.94
2085 2341 1.639298 GCGCTCCTCGATGCACTTTT 61.639 55.000 0.00 0.00 41.67 2.27
2128 2389 0.460722 GAGCAGAGCAGAGCAGATGA 59.539 55.000 0.00 0.00 0.00 2.92
2129 2390 0.462375 AGAGCAGAGCAGAGCAGATG 59.538 55.000 0.00 0.00 0.00 2.90
2130 2391 0.462375 CAGAGCAGAGCAGAGCAGAT 59.538 55.000 0.00 0.00 0.00 2.90
2131 2392 1.891616 CAGAGCAGAGCAGAGCAGA 59.108 57.895 0.00 0.00 0.00 4.26
2132 2393 1.812093 GCAGAGCAGAGCAGAGCAG 60.812 63.158 0.00 0.00 0.00 4.24
2133 2394 1.828461 AAGCAGAGCAGAGCAGAGCA 61.828 55.000 0.00 0.00 0.00 4.26
2174 2435 2.064434 ACAGGCGATGATCAGAGAGA 57.936 50.000 0.09 0.00 0.00 3.10
2175 2436 2.886862 AACAGGCGATGATCAGAGAG 57.113 50.000 0.09 0.00 0.00 3.20
2220 2481 0.318441 TCCTGGACTTGCTCGAGTTG 59.682 55.000 15.13 7.07 0.00 3.16
2244 2506 6.876789 TGAGCGAGTTGGAATTTTCAATAGTA 59.123 34.615 0.00 0.00 0.00 1.82
2246 2508 6.024049 GTGAGCGAGTTGGAATTTTCAATAG 58.976 40.000 0.00 0.00 0.00 1.73
2247 2509 5.705441 AGTGAGCGAGTTGGAATTTTCAATA 59.295 36.000 0.00 0.00 0.00 1.90
2320 2582 2.598192 CACCTTTGTGTCAAACGCTTTG 59.402 45.455 4.67 4.67 37.72 2.77
2369 2631 1.593006 CGAATTCCCGATTCCTGTTCG 59.407 52.381 0.00 0.00 40.92 3.95
2371 2633 1.557832 TCCGAATTCCCGATTCCTGTT 59.442 47.619 0.00 0.00 40.92 3.16
2373 2635 1.412710 TCTCCGAATTCCCGATTCCTG 59.587 52.381 0.00 0.00 40.92 3.86
2374 2636 1.689273 CTCTCCGAATTCCCGATTCCT 59.311 52.381 0.00 0.00 40.92 3.36
2375 2637 1.270358 CCTCTCCGAATTCCCGATTCC 60.270 57.143 0.00 0.00 40.92 3.01
2377 2639 0.106894 GCCTCTCCGAATTCCCGATT 59.893 55.000 0.00 0.00 0.00 3.34
2378 2640 1.749033 GCCTCTCCGAATTCCCGAT 59.251 57.895 0.00 0.00 0.00 4.18
2379 2641 2.432300 GGCCTCTCCGAATTCCCGA 61.432 63.158 0.00 0.00 0.00 5.14
2380 2642 2.044806 ATGGCCTCTCCGAATTCCCG 62.045 60.000 3.32 0.00 37.80 5.14
2381 2643 1.056660 TATGGCCTCTCCGAATTCCC 58.943 55.000 3.32 0.00 37.80 3.97
2382 2644 2.303022 TCATATGGCCTCTCCGAATTCC 59.697 50.000 3.32 0.00 37.80 3.01
2383 2645 3.259374 TCTCATATGGCCTCTCCGAATTC 59.741 47.826 3.32 0.00 37.80 2.17
2384 2646 3.242867 TCTCATATGGCCTCTCCGAATT 58.757 45.455 3.32 0.00 37.80 2.17
2385 2647 2.894731 TCTCATATGGCCTCTCCGAAT 58.105 47.619 3.32 0.00 37.80 3.34
2386 2648 2.381752 TCTCATATGGCCTCTCCGAA 57.618 50.000 3.32 0.00 37.80 4.30
2389 2651 4.565236 CCATCTTTCTCATATGGCCTCTCC 60.565 50.000 3.32 0.00 34.19 3.71
2390 2652 4.565236 CCCATCTTTCTCATATGGCCTCTC 60.565 50.000 3.32 0.00 39.10 3.20
2391 2653 3.330110 CCCATCTTTCTCATATGGCCTCT 59.670 47.826 3.32 0.00 39.10 3.69
2393 2655 2.224967 GCCCATCTTTCTCATATGGCCT 60.225 50.000 3.32 0.00 39.10 5.19
2394 2656 2.165998 GCCCATCTTTCTCATATGGCC 58.834 52.381 2.13 0.00 39.10 5.36
2395 2657 1.808945 CGCCCATCTTTCTCATATGGC 59.191 52.381 2.13 0.00 39.10 4.40
2397 2659 3.470709 ACACGCCCATCTTTCTCATATG 58.529 45.455 0.00 0.00 0.00 1.78
2398 2660 3.845781 ACACGCCCATCTTTCTCATAT 57.154 42.857 0.00 0.00 0.00 1.78
2399 2661 3.055458 TGAACACGCCCATCTTTCTCATA 60.055 43.478 0.00 0.00 0.00 2.15
2400 2662 2.290260 TGAACACGCCCATCTTTCTCAT 60.290 45.455 0.00 0.00 0.00 2.90
2401 2663 1.071542 TGAACACGCCCATCTTTCTCA 59.928 47.619 0.00 0.00 0.00 3.27
2402 2664 1.808411 TGAACACGCCCATCTTTCTC 58.192 50.000 0.00 0.00 0.00 2.87
2403 2665 2.270352 TTGAACACGCCCATCTTTCT 57.730 45.000 0.00 0.00 0.00 2.52
2404 2666 3.363341 TTTTGAACACGCCCATCTTTC 57.637 42.857 0.00 0.00 0.00 2.62
2405 2667 3.554752 CCATTTTGAACACGCCCATCTTT 60.555 43.478 0.00 0.00 0.00 2.52
2406 2668 2.029110 CCATTTTGAACACGCCCATCTT 60.029 45.455 0.00 0.00 0.00 2.40
2407 2669 1.545582 CCATTTTGAACACGCCCATCT 59.454 47.619 0.00 0.00 0.00 2.90
2409 2671 1.626686 TCCATTTTGAACACGCCCAT 58.373 45.000 0.00 0.00 0.00 4.00
2410 2672 1.403814 TTCCATTTTGAACACGCCCA 58.596 45.000 0.00 0.00 0.00 5.36
2412 2674 3.296322 TCATTCCATTTTGAACACGCC 57.704 42.857 0.00 0.00 0.00 5.68
2414 2676 5.124457 AGAGGATCATTCCATTTTGAACACG 59.876 40.000 0.00 0.00 45.30 4.49
2415 2677 6.521151 AGAGGATCATTCCATTTTGAACAC 57.479 37.500 0.00 0.00 45.30 3.32
2417 2679 8.309656 AGAAAAGAGGATCATTCCATTTTGAAC 58.690 33.333 10.73 1.43 45.30 3.18
2418 2680 8.426569 AGAAAAGAGGATCATTCCATTTTGAA 57.573 30.769 10.73 0.00 45.30 2.69
2420 2682 7.833786 TGAGAAAAGAGGATCATTCCATTTTG 58.166 34.615 10.73 0.00 45.30 2.44
2422 2684 7.417570 GCATGAGAAAAGAGGATCATTCCATTT 60.418 37.037 0.00 0.00 45.30 2.32
2423 2685 6.040616 GCATGAGAAAAGAGGATCATTCCATT 59.959 38.462 0.00 0.00 45.30 3.16
2424 2686 5.535406 GCATGAGAAAAGAGGATCATTCCAT 59.465 40.000 0.00 0.00 45.30 3.41
2425 2687 4.885907 GCATGAGAAAAGAGGATCATTCCA 59.114 41.667 0.00 0.00 45.30 3.53
2427 2689 6.496571 CAAGCATGAGAAAAGAGGATCATTC 58.503 40.000 0.00 0.00 37.82 2.67
2428 2690 5.163540 GCAAGCATGAGAAAAGAGGATCATT 60.164 40.000 0.00 0.00 37.82 2.57
2429 2691 4.338682 GCAAGCATGAGAAAAGAGGATCAT 59.661 41.667 0.00 0.00 37.82 2.45
2430 2692 3.693085 GCAAGCATGAGAAAAGAGGATCA 59.307 43.478 0.00 0.00 37.82 2.92
2431 2693 3.693085 TGCAAGCATGAGAAAAGAGGATC 59.307 43.478 0.00 0.00 0.00 3.36
2433 2695 3.144657 TGCAAGCATGAGAAAAGAGGA 57.855 42.857 0.00 0.00 0.00 3.71
2434 2696 3.928727 TTGCAAGCATGAGAAAAGAGG 57.071 42.857 0.00 0.00 0.00 3.69
2435 2697 6.202188 ACAAAATTGCAAGCATGAGAAAAGAG 59.798 34.615 4.94 0.00 0.00 2.85
2436 2698 6.050432 ACAAAATTGCAAGCATGAGAAAAGA 58.950 32.000 4.94 0.00 0.00 2.52
2437 2699 6.295039 ACAAAATTGCAAGCATGAGAAAAG 57.705 33.333 4.94 0.00 0.00 2.27
2438 2700 6.093771 ACAACAAAATTGCAAGCATGAGAAAA 59.906 30.769 4.94 0.00 0.00 2.29
2440 2702 5.117584 ACAACAAAATTGCAAGCATGAGAA 58.882 33.333 4.94 0.00 0.00 2.87
2441 2703 4.695396 ACAACAAAATTGCAAGCATGAGA 58.305 34.783 4.94 0.00 0.00 3.27
2442 2704 4.084223 GGACAACAAAATTGCAAGCATGAG 60.084 41.667 4.94 4.91 0.00 2.90
2444 2706 3.560481 TGGACAACAAAATTGCAAGCATG 59.440 39.130 4.94 5.96 0.00 4.06
2447 2709 2.935201 TGTGGACAACAAAATTGCAAGC 59.065 40.909 4.94 0.00 35.24 4.01
2479 2741 2.406130 TGCGTACGTCTTTTCGGATTT 58.594 42.857 17.90 0.00 34.94 2.17
2481 2743 2.288961 ATGCGTACGTCTTTTCGGAT 57.711 45.000 17.90 0.00 34.94 4.18
2482 2744 2.916716 GTTATGCGTACGTCTTTTCGGA 59.083 45.455 17.90 0.00 34.94 4.55
2483 2745 2.662637 TGTTATGCGTACGTCTTTTCGG 59.337 45.455 17.90 0.00 34.94 4.30
2484 2746 3.605056 TCTGTTATGCGTACGTCTTTTCG 59.395 43.478 17.90 1.74 0.00 3.46
2485 2747 4.620184 AGTCTGTTATGCGTACGTCTTTTC 59.380 41.667 17.90 0.00 0.00 2.29
2486 2748 4.553323 AGTCTGTTATGCGTACGTCTTTT 58.447 39.130 17.90 0.25 0.00 2.27
2488 2750 3.727079 CGAGTCTGTTATGCGTACGTCTT 60.727 47.826 17.90 9.76 0.00 3.01
2489 2751 2.222976 CGAGTCTGTTATGCGTACGTCT 60.223 50.000 17.90 7.03 0.00 4.18
2491 2753 1.202110 CCGAGTCTGTTATGCGTACGT 60.202 52.381 17.90 0.00 0.00 3.57
2492 2754 1.202110 ACCGAGTCTGTTATGCGTACG 60.202 52.381 11.84 11.84 0.00 3.67
2493 2755 2.556534 ACCGAGTCTGTTATGCGTAC 57.443 50.000 0.00 0.00 0.00 3.67
2494 2756 2.355756 GGTACCGAGTCTGTTATGCGTA 59.644 50.000 0.00 0.00 0.00 4.42
2496 2758 1.404391 AGGTACCGAGTCTGTTATGCG 59.596 52.381 6.18 0.00 0.00 4.73
2498 2760 4.205587 ACCTAGGTACCGAGTCTGTTATG 58.794 47.826 14.41 5.40 0.00 1.90
2499 2761 4.080129 TGACCTAGGTACCGAGTCTGTTAT 60.080 45.833 16.29 1.83 0.00 1.89
2500 2762 3.264193 TGACCTAGGTACCGAGTCTGTTA 59.736 47.826 16.29 10.40 0.00 2.41
2501 2763 2.040813 TGACCTAGGTACCGAGTCTGTT 59.959 50.000 16.29 3.09 0.00 3.16
2502 2764 1.632409 TGACCTAGGTACCGAGTCTGT 59.368 52.381 16.29 14.76 0.00 3.41
2503 2765 2.414994 TGACCTAGGTACCGAGTCTG 57.585 55.000 16.29 12.27 0.00 3.51
2504 2766 3.288964 CATTGACCTAGGTACCGAGTCT 58.711 50.000 16.29 10.21 0.00 3.24
2505 2767 2.361438 CCATTGACCTAGGTACCGAGTC 59.639 54.545 16.29 19.33 0.00 3.36
2507 2769 1.687123 CCCATTGACCTAGGTACCGAG 59.313 57.143 16.29 14.71 0.00 4.63
2508 2770 1.784358 CCCATTGACCTAGGTACCGA 58.216 55.000 16.29 3.40 0.00 4.69
2509 2771 0.106149 GCCCATTGACCTAGGTACCG 59.894 60.000 16.29 3.71 0.00 4.02
2510 2772 1.416772 GAGCCCATTGACCTAGGTACC 59.583 57.143 16.29 2.73 0.00 3.34
2511 2773 2.103263 CTGAGCCCATTGACCTAGGTAC 59.897 54.545 16.29 9.34 0.00 3.34
2512 2774 2.292918 ACTGAGCCCATTGACCTAGGTA 60.293 50.000 16.29 0.00 0.00 3.08
2513 2775 1.207791 CTGAGCCCATTGACCTAGGT 58.792 55.000 16.26 16.26 0.00 3.08
2514 2776 1.134280 CACTGAGCCCATTGACCTAGG 60.134 57.143 7.41 7.41 0.00 3.02
2515 2777 1.134280 CCACTGAGCCCATTGACCTAG 60.134 57.143 0.00 0.00 0.00 3.02
2516 2778 0.911769 CCACTGAGCCCATTGACCTA 59.088 55.000 0.00 0.00 0.00 3.08
2517 2779 0.842030 TCCACTGAGCCCATTGACCT 60.842 55.000 0.00 0.00 0.00 3.85
2518 2780 0.393537 CTCCACTGAGCCCATTGACC 60.394 60.000 0.00 0.00 0.00 4.02
2519 2781 0.615331 TCTCCACTGAGCCCATTGAC 59.385 55.000 0.00 0.00 38.58 3.18
2521 2783 2.426024 CAATTCTCCACTGAGCCCATTG 59.574 50.000 0.00 0.00 38.58 2.82
2522 2784 2.731572 CAATTCTCCACTGAGCCCATT 58.268 47.619 0.00 0.00 38.58 3.16
2524 2786 0.322816 GCAATTCTCCACTGAGCCCA 60.323 55.000 0.00 0.00 38.58 5.36
2525 2787 1.372087 CGCAATTCTCCACTGAGCCC 61.372 60.000 0.00 0.00 38.58 5.19
2526 2788 0.674895 ACGCAATTCTCCACTGAGCC 60.675 55.000 0.00 0.00 38.58 4.70
2527 2789 1.160137 AACGCAATTCTCCACTGAGC 58.840 50.000 0.00 0.00 38.58 4.26
2528 2790 3.589988 AGTAACGCAATTCTCCACTGAG 58.410 45.455 0.00 0.00 40.17 3.35
2529 2791 3.678056 AGTAACGCAATTCTCCACTGA 57.322 42.857 0.00 0.00 0.00 3.41
2530 2792 4.749245 AAAGTAACGCAATTCTCCACTG 57.251 40.909 0.00 0.00 0.00 3.66
2531 2793 5.767816 AAAAAGTAACGCAATTCTCCACT 57.232 34.783 0.00 0.00 0.00 4.00
2598 2976 4.585879 GGCTGTAGTACATCCAAAAGGAA 58.414 43.478 16.63 0.00 34.65 3.36
2600 2978 2.936498 CGGCTGTAGTACATCCAAAAGG 59.064 50.000 20.31 3.00 34.18 3.11
2601 2979 3.596214 ACGGCTGTAGTACATCCAAAAG 58.404 45.455 20.31 8.59 34.18 2.27
2618 3239 3.730963 GCAAGGTTCTTTTATGCTACGGC 60.731 47.826 0.00 0.00 39.26 5.68
2624 3245 7.761249 ACTGAATAATGCAAGGTTCTTTTATGC 59.239 33.333 0.00 0.00 37.52 3.14
2633 3254 5.460646 CGTTTCACTGAATAATGCAAGGTT 58.539 37.500 0.00 0.00 0.00 3.50
2634 3255 4.082787 CCGTTTCACTGAATAATGCAAGGT 60.083 41.667 0.00 0.00 0.00 3.50
2635 3256 4.414852 CCGTTTCACTGAATAATGCAAGG 58.585 43.478 0.00 0.00 0.00 3.61
2636 3257 3.853671 GCCGTTTCACTGAATAATGCAAG 59.146 43.478 0.00 0.00 0.00 4.01
2637 3258 3.254411 TGCCGTTTCACTGAATAATGCAA 59.746 39.130 0.00 0.00 0.00 4.08
2638 3259 2.816672 TGCCGTTTCACTGAATAATGCA 59.183 40.909 0.00 0.00 0.00 3.96
2659 3288 0.838987 TACCTTCAGGGGCGTTTCCT 60.839 55.000 0.00 0.00 40.27 3.36
2665 3294 2.194201 TTCTTTTACCTTCAGGGGCG 57.806 50.000 0.00 0.00 40.27 6.13
2669 3298 7.283354 ACTGTTCTCTTTTCTTTTACCTTCAGG 59.717 37.037 0.00 0.00 42.17 3.86
2678 3307 7.196331 GTGTATGCACTGTTCTCTTTTCTTTT 58.804 34.615 6.69 0.00 42.13 2.27
2681 3310 5.931441 GTGTATGCACTGTTCTCTTTTCT 57.069 39.130 6.69 0.00 42.13 2.52
2709 3338 3.673809 GCTACTGTCTAACTGAAACGTGG 59.326 47.826 0.00 0.00 0.00 4.94
2724 3353 3.290948 TTCCCTTTTGTGTGCTACTGT 57.709 42.857 0.00 0.00 0.00 3.55
2731 3363 5.296748 CCTGGTTATTTTCCCTTTTGTGTG 58.703 41.667 0.00 0.00 0.00 3.82
2765 3397 4.243270 GTCATGTAGTAATATGGACGCCC 58.757 47.826 0.00 0.00 0.00 6.13
2797 3429 2.294791 CTCTATTCCTCCGCGTGAGATT 59.705 50.000 21.43 10.77 44.42 2.40
2802 3434 1.674441 TGTACTCTATTCCTCCGCGTG 59.326 52.381 4.92 0.00 0.00 5.34
2803 3435 2.048444 TGTACTCTATTCCTCCGCGT 57.952 50.000 4.92 0.00 0.00 6.01
2804 3436 4.636648 AGATATGTACTCTATTCCTCCGCG 59.363 45.833 0.00 0.00 0.00 6.46
2806 3438 8.041919 TCTACAGATATGTACTCTATTCCTCCG 58.958 40.741 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.