Multiple sequence alignment - TraesCS3A01G513300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G513300 chr3A 100.000 3176 0 0 1 3176 732624556 732621381 0.000000e+00 5866.0
1 TraesCS3A01G513300 chr3A 100.000 29 0 0 3371 3399 690458119 690458091 2.000000e-03 54.7
2 TraesCS3A01G513300 chr3A 100.000 29 0 0 3371 3399 732621186 732621158 2.000000e-03 54.7
3 TraesCS3A01G513300 chr3D 86.560 3073 223 77 217 3172 603434235 603437234 0.000000e+00 3212.0
4 TraesCS3A01G513300 chr3D 86.667 105 14 0 118 222 603434096 603434200 2.140000e-22 117.0
5 TraesCS3A01G513300 chr3D 82.051 78 14 0 229 306 539243523 539243446 2.190000e-07 67.6
6 TraesCS3A01G513300 chr3B 88.758 1272 72 29 608 1852 810310045 810308818 0.000000e+00 1491.0
7 TraesCS3A01G513300 chr3B 91.648 886 51 10 2303 3172 810308500 810307622 0.000000e+00 1205.0
8 TraesCS3A01G513300 chr3B 89.401 217 17 3 2135 2347 810308706 810308492 5.590000e-68 268.0
9 TraesCS3A01G513300 chr2A 98.020 101 2 0 1 101 687005243 687005143 3.490000e-40 176.0
10 TraesCS3A01G513300 chr2A 92.373 118 7 2 1 117 749347746 749347630 2.100000e-37 167.0
11 TraesCS3A01G513300 chr2A 89.362 47 4 1 473 518 732597440 732597394 1.320000e-04 58.4
12 TraesCS3A01G513300 chr6A 98.000 100 2 0 1 100 11867463 11867562 1.250000e-39 174.0
13 TraesCS3A01G513300 chr6A 97.000 100 3 0 1 100 32737430 32737529 5.830000e-38 169.0
14 TraesCS3A01G513300 chr1A 98.969 97 1 0 1 97 583242853 583242949 1.250000e-39 174.0
15 TraesCS3A01G513300 chr7A 96.226 106 2 2 1 104 19093102 19093207 4.510000e-39 172.0
16 TraesCS3A01G513300 chr7A 97.059 102 3 0 1 102 705305679 705305780 4.510000e-39 172.0
17 TraesCS3A01G513300 chr7A 95.327 107 3 2 1 107 129492405 129492301 5.830000e-38 169.0
18 TraesCS3A01G513300 chr7B 94.643 112 3 3 2 111 703508666 703508556 1.620000e-38 171.0
19 TraesCS3A01G513300 chr1D 90.625 64 6 0 243 306 267343147 267343084 6.040000e-13 86.1
20 TraesCS3A01G513300 chr1D 83.333 84 13 1 227 309 10376759 10376676 3.640000e-10 76.8
21 TraesCS3A01G513300 chr1D 81.176 85 13 3 227 309 10377888 10377805 7.870000e-07 65.8
22 TraesCS3A01G513300 chr1D 91.111 45 4 0 2798 2842 417983 418027 1.020000e-05 62.1
23 TraesCS3A01G513300 chr1B 83.750 80 13 0 227 306 346401428 346401507 3.640000e-10 76.8
24 TraesCS3A01G513300 chr1B 96.875 32 1 0 492 523 598845228 598845197 2.000000e-03 54.7
25 TraesCS3A01G513300 chr2D 92.000 50 3 1 258 306 461799845 461799796 6.090000e-08 69.4
26 TraesCS3A01G513300 chrUn 81.250 80 15 0 227 306 131206585 131206664 7.870000e-07 65.8
27 TraesCS3A01G513300 chr6B 100.000 35 0 0 486 520 453087714 453087680 7.870000e-07 65.8
28 TraesCS3A01G513300 chr4A 87.719 57 6 1 258 313 109862583 109862527 7.870000e-07 65.8
29 TraesCS3A01G513300 chr2B 96.774 31 1 0 1894 1924 438927822 438927852 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G513300 chr3A 732621158 732624556 3398 True 2960.35 5866 100.000000 1 3399 2 chr3A.!!$R2 3398
1 TraesCS3A01G513300 chr3D 603434096 603437234 3138 False 1664.50 3212 86.613500 118 3172 2 chr3D.!!$F1 3054
2 TraesCS3A01G513300 chr3B 810307622 810310045 2423 True 988.00 1491 89.935667 608 3172 3 chr3B.!!$R1 2564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
208 209 0.030638 GGCAATAAACATGCGCGGAT 59.969 50.0 7.52 7.52 44.75 4.18 F
501 557 0.031585 TGTGGACGGTTTGAGAGTCG 59.968 55.0 0.00 0.00 35.87 4.18 F
1557 1668 0.038159 GCCACTGTCAGTTCTACGCT 60.038 55.0 1.67 0.00 0.00 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1998 2155 0.167908 GGTGTGTGTGTGTGTGTGTG 59.832 55.0 0.0 0.0 0.0 3.82 R
1999 2156 0.250510 TGGTGTGTGTGTGTGTGTGT 60.251 50.0 0.0 0.0 0.0 3.72 R
3379 3653 0.323087 GGCCCCTATGTTGAAACCGT 60.323 55.0 0.0 0.0 0.0 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.159327 TCACTCACTGCACTCACATG 57.841 50.000 0.00 0.00 0.00 3.21
20 21 1.413812 TCACTCACTGCACTCACATGT 59.586 47.619 0.00 0.00 0.00 3.21
21 22 1.529865 CACTCACTGCACTCACATGTG 59.470 52.381 20.18 20.18 40.62 3.21
22 23 1.139654 ACTCACTGCACTCACATGTGT 59.860 47.619 24.63 4.31 39.89 3.72
23 24 1.529865 CTCACTGCACTCACATGTGTG 59.470 52.381 24.63 23.70 46.91 3.82
24 25 1.134431 TCACTGCACTCACATGTGTGT 60.134 47.619 24.13 24.13 45.76 3.72
25 26 2.102252 TCACTGCACTCACATGTGTGTA 59.898 45.455 27.81 17.38 45.76 2.90
26 27 3.069289 CACTGCACTCACATGTGTGTAT 58.931 45.455 27.81 14.24 45.76 2.29
27 28 3.069289 ACTGCACTCACATGTGTGTATG 58.931 45.455 27.81 21.90 45.76 2.39
28 29 3.244181 ACTGCACTCACATGTGTGTATGA 60.244 43.478 27.81 15.88 45.76 2.15
29 30 3.737850 TGCACTCACATGTGTGTATGAA 58.262 40.909 27.81 12.80 45.76 2.57
30 31 4.325972 TGCACTCACATGTGTGTATGAAT 58.674 39.130 27.81 6.89 45.76 2.57
31 32 4.154556 TGCACTCACATGTGTGTATGAATG 59.845 41.667 27.81 17.63 45.76 2.67
32 33 4.437794 GCACTCACATGTGTGTATGAATGG 60.438 45.833 27.81 17.01 45.76 3.16
33 34 4.095334 CACTCACATGTGTGTATGAATGGG 59.905 45.833 27.81 12.97 45.76 4.00
34 35 3.016031 TCACATGTGTGTATGAATGGGC 58.984 45.455 24.63 0.00 45.76 5.36
35 36 2.099592 CACATGTGTGTATGAATGGGCC 59.900 50.000 18.03 0.00 40.96 5.80
36 37 2.291475 ACATGTGTGTATGAATGGGCCA 60.291 45.455 9.61 9.61 36.63 5.36
37 38 2.593925 TGTGTGTATGAATGGGCCAA 57.406 45.000 11.89 0.00 0.00 4.52
38 39 2.445427 TGTGTGTATGAATGGGCCAAG 58.555 47.619 11.89 0.00 0.00 3.61
39 40 2.040947 TGTGTGTATGAATGGGCCAAGA 59.959 45.455 11.89 0.00 0.00 3.02
40 41 2.684881 GTGTGTATGAATGGGCCAAGAG 59.315 50.000 11.89 0.00 0.00 2.85
41 42 2.575735 TGTGTATGAATGGGCCAAGAGA 59.424 45.455 11.89 0.00 0.00 3.10
42 43 3.010027 TGTGTATGAATGGGCCAAGAGAA 59.990 43.478 11.89 0.00 0.00 2.87
43 44 4.210331 GTGTATGAATGGGCCAAGAGAAT 58.790 43.478 11.89 2.95 0.00 2.40
44 45 4.646492 GTGTATGAATGGGCCAAGAGAATT 59.354 41.667 11.89 0.00 0.00 2.17
45 46 5.127682 GTGTATGAATGGGCCAAGAGAATTT 59.872 40.000 11.89 0.00 0.00 1.82
46 47 5.360714 TGTATGAATGGGCCAAGAGAATTTC 59.639 40.000 11.89 8.70 0.00 2.17
47 48 3.777087 TGAATGGGCCAAGAGAATTTCA 58.223 40.909 11.89 11.58 0.00 2.69
48 49 3.765511 TGAATGGGCCAAGAGAATTTCAG 59.234 43.478 11.89 0.00 0.00 3.02
49 50 3.744940 ATGGGCCAAGAGAATTTCAGA 57.255 42.857 11.89 0.00 0.00 3.27
50 51 3.524095 TGGGCCAAGAGAATTTCAGAA 57.476 42.857 2.13 0.00 0.00 3.02
51 52 4.051661 TGGGCCAAGAGAATTTCAGAAT 57.948 40.909 2.13 0.00 0.00 2.40
52 53 4.419282 TGGGCCAAGAGAATTTCAGAATT 58.581 39.130 2.13 0.00 38.16 2.17
53 54 4.840115 TGGGCCAAGAGAATTTCAGAATTT 59.160 37.500 2.13 0.00 35.65 1.82
54 55 5.307716 TGGGCCAAGAGAATTTCAGAATTTT 59.692 36.000 2.13 0.00 35.65 1.82
55 56 6.496565 TGGGCCAAGAGAATTTCAGAATTTTA 59.503 34.615 2.13 0.00 35.65 1.52
56 57 7.038048 GGGCCAAGAGAATTTCAGAATTTTAG 58.962 38.462 4.39 0.00 35.65 1.85
57 58 7.310052 GGGCCAAGAGAATTTCAGAATTTTAGT 60.310 37.037 4.39 0.00 35.65 2.24
58 59 8.090831 GGCCAAGAGAATTTCAGAATTTTAGTT 58.909 33.333 0.00 0.00 35.65 2.24
59 60 8.919661 GCCAAGAGAATTTCAGAATTTTAGTTG 58.080 33.333 0.00 0.00 35.65 3.16
60 61 9.415544 CCAAGAGAATTTCAGAATTTTAGTTGG 57.584 33.333 0.00 9.41 35.65 3.77
61 62 9.415544 CAAGAGAATTTCAGAATTTTAGTTGGG 57.584 33.333 0.00 0.00 35.65 4.12
62 63 7.606349 AGAGAATTTCAGAATTTTAGTTGGGC 58.394 34.615 0.00 0.00 35.65 5.36
63 64 7.452813 AGAGAATTTCAGAATTTTAGTTGGGCT 59.547 33.333 0.00 0.00 35.65 5.19
64 65 7.966812 AGAATTTCAGAATTTTAGTTGGGCTT 58.033 30.769 0.00 0.00 35.65 4.35
65 66 8.432013 AGAATTTCAGAATTTTAGTTGGGCTTT 58.568 29.630 0.00 0.00 35.65 3.51
66 67 7.967890 ATTTCAGAATTTTAGTTGGGCTTTG 57.032 32.000 0.00 0.00 0.00 2.77
67 68 5.467035 TCAGAATTTTAGTTGGGCTTTGG 57.533 39.130 0.00 0.00 0.00 3.28
68 69 4.283212 TCAGAATTTTAGTTGGGCTTTGGG 59.717 41.667 0.00 0.00 0.00 4.12
69 70 3.007940 AGAATTTTAGTTGGGCTTTGGGC 59.992 43.478 0.00 0.00 40.90 5.36
86 87 3.569873 GCCAAAGGCCTACTAGCAA 57.430 52.632 5.16 0.00 44.06 3.91
87 88 1.834188 GCCAAAGGCCTACTAGCAAA 58.166 50.000 5.16 0.00 44.06 3.68
88 89 2.167662 GCCAAAGGCCTACTAGCAAAA 58.832 47.619 5.16 0.00 44.06 2.44
89 90 2.760650 GCCAAAGGCCTACTAGCAAAAT 59.239 45.455 5.16 0.00 44.06 1.82
90 91 3.195610 GCCAAAGGCCTACTAGCAAAATT 59.804 43.478 5.16 0.00 44.06 1.82
91 92 4.678044 GCCAAAGGCCTACTAGCAAAATTC 60.678 45.833 5.16 0.00 44.06 2.17
92 93 4.142160 CCAAAGGCCTACTAGCAAAATTCC 60.142 45.833 5.16 0.00 0.00 3.01
93 94 4.316025 AAGGCCTACTAGCAAAATTCCA 57.684 40.909 5.16 0.00 0.00 3.53
94 95 4.316025 AGGCCTACTAGCAAAATTCCAA 57.684 40.909 1.29 0.00 0.00 3.53
95 96 4.017126 AGGCCTACTAGCAAAATTCCAAC 58.983 43.478 1.29 0.00 0.00 3.77
96 97 3.761752 GGCCTACTAGCAAAATTCCAACA 59.238 43.478 0.00 0.00 0.00 3.33
97 98 4.142381 GGCCTACTAGCAAAATTCCAACAG 60.142 45.833 0.00 0.00 0.00 3.16
98 99 4.459337 GCCTACTAGCAAAATTCCAACAGT 59.541 41.667 0.00 0.00 0.00 3.55
99 100 5.048013 GCCTACTAGCAAAATTCCAACAGTT 60.048 40.000 0.00 0.00 0.00 3.16
100 101 6.516693 GCCTACTAGCAAAATTCCAACAGTTT 60.517 38.462 0.00 0.00 0.00 2.66
101 102 7.308951 GCCTACTAGCAAAATTCCAACAGTTTA 60.309 37.037 0.00 0.00 0.00 2.01
102 103 8.739972 CCTACTAGCAAAATTCCAACAGTTTAT 58.260 33.333 0.00 0.00 0.00 1.40
103 104 9.774742 CTACTAGCAAAATTCCAACAGTTTATC 57.225 33.333 0.00 0.00 0.00 1.75
104 105 8.177119 ACTAGCAAAATTCCAACAGTTTATCA 57.823 30.769 0.00 0.00 0.00 2.15
105 106 8.299570 ACTAGCAAAATTCCAACAGTTTATCAG 58.700 33.333 0.00 0.00 0.00 2.90
106 107 5.928264 AGCAAAATTCCAACAGTTTATCAGC 59.072 36.000 0.00 0.00 0.00 4.26
107 108 5.928264 GCAAAATTCCAACAGTTTATCAGCT 59.072 36.000 0.00 0.00 0.00 4.24
108 109 6.128742 GCAAAATTCCAACAGTTTATCAGCTG 60.129 38.462 7.63 7.63 38.58 4.24
109 110 5.649782 AATTCCAACAGTTTATCAGCTGG 57.350 39.130 15.13 0.00 37.07 4.85
110 111 2.436417 TCCAACAGTTTATCAGCTGGC 58.564 47.619 15.13 0.00 37.07 4.85
111 112 2.161855 CCAACAGTTTATCAGCTGGCA 58.838 47.619 15.13 0.00 37.07 4.92
112 113 2.557924 CCAACAGTTTATCAGCTGGCAA 59.442 45.455 15.13 5.30 37.07 4.52
113 114 3.366679 CCAACAGTTTATCAGCTGGCAAG 60.367 47.826 15.13 0.53 37.07 4.01
135 136 4.807039 GCATACGGACGTGCGGGT 62.807 66.667 32.46 17.97 0.00 5.28
144 145 0.733566 GACGTGCGGGTATTGAACGA 60.734 55.000 0.00 0.00 40.93 3.85
146 147 0.734942 CGTGCGGGTATTGAACGAGT 60.735 55.000 0.00 0.00 40.93 4.18
147 148 0.719465 GTGCGGGTATTGAACGAGTG 59.281 55.000 0.00 0.00 0.00 3.51
160 161 4.274978 TGAACGAGTGTGGTAGATATCCA 58.725 43.478 0.00 0.00 0.00 3.41
193 194 3.069016 TCAAGTAAACGTCTCTCTGGCAA 59.931 43.478 0.00 0.00 0.00 4.52
195 196 5.047590 TCAAGTAAACGTCTCTCTGGCAATA 60.048 40.000 0.00 0.00 0.00 1.90
205 206 0.098552 TCTGGCAATAAACATGCGCG 59.901 50.000 0.00 0.00 44.75 6.86
208 209 0.030638 GGCAATAAACATGCGCGGAT 59.969 50.000 7.52 7.52 44.75 4.18
235 277 2.482839 GGATGCTGTTCTAGTGAGAGGC 60.483 54.545 0.00 0.00 31.77 4.70
238 280 1.484240 GCTGTTCTAGTGAGAGGCCAT 59.516 52.381 5.01 0.00 31.77 4.40
240 282 1.208052 TGTTCTAGTGAGAGGCCATGC 59.792 52.381 5.01 0.00 31.77 4.06
270 312 3.869272 GGCGTCAATGCAGAGCGG 61.869 66.667 0.00 0.00 36.28 5.52
314 356 4.717629 CAGCTGACGTCGGGCGAA 62.718 66.667 25.20 0.00 44.77 4.70
321 363 1.908066 GACGTCGGGCGAAAAAGCAT 61.908 55.000 9.82 0.00 44.77 3.79
328 370 2.988688 GCGAAAAAGCATGCGGGGA 61.989 57.895 13.01 0.00 37.05 4.81
332 374 2.171209 AAAAAGCATGCGGGGAAGGC 62.171 55.000 13.01 0.00 0.00 4.35
340 382 4.547367 CGGGGAAGGCGGATGGTC 62.547 72.222 0.00 0.00 0.00 4.02
377 433 4.008933 GGCAGCGTCCTGGACACT 62.009 66.667 25.42 18.82 39.54 3.55
385 441 0.249911 GTCCTGGACACTCGCAAAGT 60.250 55.000 21.70 0.00 39.44 2.66
468 524 4.021456 ACAGTATCGTGTTGGATGACAAGA 60.021 41.667 0.00 0.00 40.38 3.02
471 527 4.749245 ATCGTGTTGGATGACAAGAAAC 57.251 40.909 0.00 0.00 40.46 2.78
484 540 1.931172 CAAGAAACGTCCGAACTGTGT 59.069 47.619 0.00 0.00 0.00 3.72
490 546 1.663702 GTCCGAACTGTGTGGACGG 60.664 63.158 13.79 0.00 42.42 4.79
501 557 0.031585 TGTGGACGGTTTGAGAGTCG 59.968 55.000 0.00 0.00 35.87 4.18
502 558 0.313043 GTGGACGGTTTGAGAGTCGA 59.687 55.000 0.00 0.00 35.87 4.20
503 559 1.067776 GTGGACGGTTTGAGAGTCGAT 60.068 52.381 0.00 0.00 35.87 3.59
516 572 1.936547 GAGTCGATGTTGAAGATGCCC 59.063 52.381 0.00 0.00 0.00 5.36
520 576 3.938963 GTCGATGTTGAAGATGCCCTAAA 59.061 43.478 0.00 0.00 0.00 1.85
526 582 6.211587 TGTTGAAGATGCCCTAAATTCATG 57.788 37.500 0.00 0.00 30.56 3.07
570 631 3.399440 TGCCCTTTGCCAAGTATTTTG 57.601 42.857 0.00 0.00 40.16 2.44
571 632 2.968574 TGCCCTTTGCCAAGTATTTTGA 59.031 40.909 0.00 0.00 40.16 2.69
572 633 3.389329 TGCCCTTTGCCAAGTATTTTGAA 59.611 39.130 0.00 0.00 40.16 2.69
573 634 4.041444 TGCCCTTTGCCAAGTATTTTGAAT 59.959 37.500 0.00 0.00 40.16 2.57
574 635 5.247110 TGCCCTTTGCCAAGTATTTTGAATA 59.753 36.000 0.00 0.00 40.16 1.75
575 636 5.812127 GCCCTTTGCCAAGTATTTTGAATAG 59.188 40.000 0.00 0.00 0.00 1.73
576 637 5.812127 CCCTTTGCCAAGTATTTTGAATAGC 59.188 40.000 0.00 0.00 0.00 2.97
577 638 5.812127 CCTTTGCCAAGTATTTTGAATAGCC 59.188 40.000 0.00 0.00 0.00 3.93
578 639 5.337578 TTGCCAAGTATTTTGAATAGCCC 57.662 39.130 0.00 0.00 0.00 5.19
579 640 4.609301 TGCCAAGTATTTTGAATAGCCCT 58.391 39.130 0.00 0.00 0.00 5.19
580 641 5.022787 TGCCAAGTATTTTGAATAGCCCTT 58.977 37.500 0.00 0.00 0.00 3.95
591 652 4.703897 TGAATAGCCCTTTGAATACTCGG 58.296 43.478 0.00 0.00 0.00 4.63
592 653 2.614829 TAGCCCTTTGAATACTCGGC 57.385 50.000 0.00 0.00 36.62 5.54
593 654 0.618458 AGCCCTTTGAATACTCGGCA 59.382 50.000 0.00 0.00 38.90 5.69
595 656 2.438021 AGCCCTTTGAATACTCGGCATA 59.562 45.455 0.00 0.00 38.90 3.14
596 657 2.548480 GCCCTTTGAATACTCGGCATAC 59.452 50.000 0.00 0.00 36.38 2.39
777 853 2.689983 GCCATTTCATCGGTTTCTCCAT 59.310 45.455 0.00 0.00 35.57 3.41
778 854 3.243201 GCCATTTCATCGGTTTCTCCATC 60.243 47.826 0.00 0.00 35.57 3.51
779 855 3.316308 CCATTTCATCGGTTTCTCCATCC 59.684 47.826 0.00 0.00 35.57 3.51
780 856 3.712016 TTTCATCGGTTTCTCCATCCA 57.288 42.857 0.00 0.00 35.57 3.41
781 857 2.691409 TCATCGGTTTCTCCATCCAC 57.309 50.000 0.00 0.00 35.57 4.02
782 858 1.134818 TCATCGGTTTCTCCATCCACG 60.135 52.381 0.00 0.00 35.57 4.94
783 859 0.462047 ATCGGTTTCTCCATCCACGC 60.462 55.000 0.00 0.00 35.57 5.34
784 860 2.106683 CGGTTTCTCCATCCACGCC 61.107 63.158 0.00 0.00 35.57 5.68
785 861 1.749258 GGTTTCTCCATCCACGCCC 60.749 63.158 0.00 0.00 35.97 6.13
786 862 2.106683 GTTTCTCCATCCACGCCCG 61.107 63.158 0.00 0.00 0.00 6.13
787 863 2.589157 TTTCTCCATCCACGCCCGT 61.589 57.895 0.00 0.00 0.00 5.28
898 974 4.478371 CCCCCGCTCCCCGTTTAC 62.478 72.222 0.00 0.00 34.38 2.01
899 975 4.478371 CCCCGCTCCCCGTTTACC 62.478 72.222 0.00 0.00 34.38 2.85
900 976 4.478371 CCCGCTCCCCGTTTACCC 62.478 72.222 0.00 0.00 34.38 3.69
901 977 3.396570 CCGCTCCCCGTTTACCCT 61.397 66.667 0.00 0.00 34.38 4.34
902 978 2.666812 CGCTCCCCGTTTACCCTT 59.333 61.111 0.00 0.00 0.00 3.95
903 979 1.449070 CGCTCCCCGTTTACCCTTC 60.449 63.158 0.00 0.00 0.00 3.46
904 980 1.449070 GCTCCCCGTTTACCCTTCG 60.449 63.158 0.00 0.00 0.00 3.79
905 981 1.449070 CTCCCCGTTTACCCTTCGC 60.449 63.158 0.00 0.00 0.00 4.70
906 982 2.437180 CCCCGTTTACCCTTCGCC 60.437 66.667 0.00 0.00 0.00 5.54
907 983 2.666812 CCCGTTTACCCTTCGCCT 59.333 61.111 0.00 0.00 0.00 5.52
908 984 1.616091 CCCCGTTTACCCTTCGCCTA 61.616 60.000 0.00 0.00 0.00 3.93
909 985 0.179092 CCCGTTTACCCTTCGCCTAG 60.179 60.000 0.00 0.00 0.00 3.02
910 986 0.808847 CCGTTTACCCTTCGCCTAGC 60.809 60.000 0.00 0.00 0.00 3.42
911 987 0.175073 CGTTTACCCTTCGCCTAGCT 59.825 55.000 0.00 0.00 0.00 3.32
912 988 1.406539 CGTTTACCCTTCGCCTAGCTA 59.593 52.381 0.00 0.00 0.00 3.32
913 989 2.797439 CGTTTACCCTTCGCCTAGCTAC 60.797 54.545 0.00 0.00 0.00 3.58
914 990 1.406903 TTACCCTTCGCCTAGCTACC 58.593 55.000 0.00 0.00 0.00 3.18
915 991 0.259647 TACCCTTCGCCTAGCTACCA 59.740 55.000 0.00 0.00 0.00 3.25
941 1017 1.065273 ACTCGTCGTGTGTGACCAC 59.935 57.895 0.00 0.00 42.19 4.16
947 1023 0.759812 TCGTGTGTGACCACCCCTTA 60.760 55.000 0.00 0.00 41.09 2.69
954 1030 3.262405 GTGTGACCACCCCTTACATTCTA 59.738 47.826 0.00 0.00 35.44 2.10
957 1033 3.262405 TGACCACCCCTTACATTCTACAC 59.738 47.826 0.00 0.00 0.00 2.90
963 1039 3.118371 CCCCTTACATTCTACACCACTCC 60.118 52.174 0.00 0.00 0.00 3.85
964 1040 3.517901 CCCTTACATTCTACACCACTCCA 59.482 47.826 0.00 0.00 0.00 3.86
971 1064 0.809385 CTACACCACTCCACGACGAT 59.191 55.000 0.00 0.00 0.00 3.73
1033 1126 3.125607 CGCCCACGCTCTACCATA 58.874 61.111 0.00 0.00 0.00 2.74
1035 1128 0.667487 CGCCCACGCTCTACCATATG 60.667 60.000 0.00 0.00 0.00 1.78
1203 1302 2.177594 CTCTGTTGCTCCCTTCCGCT 62.178 60.000 0.00 0.00 0.00 5.52
1204 1303 2.032528 TGTTGCTCCCTTCCGCTG 59.967 61.111 0.00 0.00 0.00 5.18
1205 1304 3.435186 GTTGCTCCCTTCCGCTGC 61.435 66.667 0.00 0.00 0.00 5.25
1206 1305 3.952508 TTGCTCCCTTCCGCTGCA 61.953 61.111 0.00 0.00 0.00 4.41
1207 1306 3.490031 TTGCTCCCTTCCGCTGCAA 62.490 57.895 0.00 0.00 40.65 4.08
1209 1308 2.747855 CTCCCTTCCGCTGCAACC 60.748 66.667 0.00 0.00 0.00 3.77
1391 1493 3.164977 GCTCCAGGGCCCCTACTC 61.165 72.222 21.43 0.86 29.64 2.59
1457 1568 1.588403 CGGCGAGCTGTCAGATGAG 60.588 63.158 0.00 0.00 0.00 2.90
1557 1668 0.038159 GCCACTGTCAGTTCTACGCT 60.038 55.000 1.67 0.00 0.00 5.07
1708 1819 3.061260 GAGGTAGGTGACGACGGCC 62.061 68.421 0.00 0.00 36.74 6.13
1854 1969 3.646736 TGCACTCCTCTACTGTAGCTA 57.353 47.619 9.98 0.00 0.00 3.32
1855 1970 4.171878 TGCACTCCTCTACTGTAGCTAT 57.828 45.455 9.98 0.00 0.00 2.97
1856 1971 4.537751 TGCACTCCTCTACTGTAGCTATT 58.462 43.478 9.98 0.00 0.00 1.73
1857 1972 5.691896 TGCACTCCTCTACTGTAGCTATTA 58.308 41.667 9.98 0.00 0.00 0.98
1912 2069 3.889520 ACGAAAGTCCTATTCTGACCC 57.110 47.619 0.00 0.00 44.19 4.46
1913 2070 2.500504 ACGAAAGTCCTATTCTGACCCC 59.499 50.000 0.00 0.00 44.19 4.95
1914 2071 2.481449 CGAAAGTCCTATTCTGACCCCG 60.481 54.545 0.00 0.00 33.09 5.73
1915 2072 2.544844 AAGTCCTATTCTGACCCCGA 57.455 50.000 0.00 0.00 33.09 5.14
1916 2073 2.074729 AGTCCTATTCTGACCCCGAG 57.925 55.000 0.00 0.00 33.09 4.63
1917 2074 0.389757 GTCCTATTCTGACCCCGAGC 59.610 60.000 0.00 0.00 0.00 5.03
1918 2075 0.261991 TCCTATTCTGACCCCGAGCT 59.738 55.000 0.00 0.00 0.00 4.09
1919 2076 0.676736 CCTATTCTGACCCCGAGCTC 59.323 60.000 2.73 2.73 0.00 4.09
1920 2077 1.403814 CTATTCTGACCCCGAGCTCA 58.596 55.000 15.40 0.00 0.00 4.26
1921 2078 1.757118 CTATTCTGACCCCGAGCTCAA 59.243 52.381 15.40 0.00 0.00 3.02
1922 2079 0.984230 ATTCTGACCCCGAGCTCAAA 59.016 50.000 15.40 0.00 0.00 2.69
1923 2080 0.984230 TTCTGACCCCGAGCTCAAAT 59.016 50.000 15.40 0.00 0.00 2.32
1924 2081 0.250234 TCTGACCCCGAGCTCAAATG 59.750 55.000 15.40 1.16 0.00 2.32
1925 2082 1.372087 CTGACCCCGAGCTCAAATGC 61.372 60.000 15.40 0.11 0.00 3.56
1926 2083 1.377202 GACCCCGAGCTCAAATGCA 60.377 57.895 15.40 0.00 34.99 3.96
1927 2084 0.749454 GACCCCGAGCTCAAATGCAT 60.749 55.000 15.40 0.00 34.99 3.96
1948 2105 9.881529 ATGCATGTTTTAAGCAAACTATTTTTG 57.118 25.926 0.00 0.00 44.68 2.44
1955 2112 8.430801 TTTAAGCAAACTATTTTTGTGCATGT 57.569 26.923 0.00 0.00 37.68 3.21
1961 2118 7.095271 GCAAACTATTTTTGTGCATGTTACCAT 60.095 33.333 0.00 0.00 35.28 3.55
1983 2140 6.405286 CCATTTCCTAAACAACAGAACACACA 60.405 38.462 0.00 0.00 0.00 3.72
1985 2142 4.580868 TCCTAAACAACAGAACACACACA 58.419 39.130 0.00 0.00 0.00 3.72
1986 2143 4.393680 TCCTAAACAACAGAACACACACAC 59.606 41.667 0.00 0.00 0.00 3.82
1987 2144 4.155099 CCTAAACAACAGAACACACACACA 59.845 41.667 0.00 0.00 0.00 3.72
1990 2147 2.225491 ACAACAGAACACACACACACAC 59.775 45.455 0.00 0.00 0.00 3.82
1992 2149 1.804151 ACAGAACACACACACACACAC 59.196 47.619 0.00 0.00 0.00 3.82
1995 2152 1.533299 GAACACACACACACACACACA 59.467 47.619 0.00 0.00 0.00 3.72
1996 2153 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1998 2155 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1999 2156 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2000 2157 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2001 2158 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2002 2159 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2003 2160 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2004 2161 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2006 2163 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2014 2171 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2015 2172 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2016 2173 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2017 2174 0.167908 CACACACACACACACACACC 59.832 55.000 0.00 0.00 0.00 4.16
2018 2175 0.250510 ACACACACACACACACACCA 60.251 50.000 0.00 0.00 0.00 4.17
2023 2180 2.094803 CACACACACACACACCAACAAT 60.095 45.455 0.00 0.00 0.00 2.71
2032 2189 4.761739 ACACACACCAACAATCTAATCTGG 59.238 41.667 0.00 0.00 0.00 3.86
2055 2212 8.519799 TGGTAGAAAAGTTTCTGAAGTTCATT 57.480 30.769 15.09 0.00 46.34 2.57
2074 2231 1.775385 TCTGTATGCGGTCTCCATGA 58.225 50.000 0.00 0.00 0.00 3.07
2140 2297 0.590230 CGAGTCTCGAGCGAACATCC 60.590 60.000 17.52 0.00 43.74 3.51
2151 2308 3.792185 GAACATCCGCCCATCCCCC 62.792 68.421 0.00 0.00 0.00 5.40
2169 2326 2.304761 CCCCCTACTGCTGTTTTAGTCA 59.695 50.000 0.09 0.00 0.00 3.41
2198 2357 4.367386 GCTATCTGCTGCACTGAAAATT 57.633 40.909 0.00 0.00 38.95 1.82
2204 2363 4.038282 TCTGCTGCACTGAAAATTCACAAT 59.962 37.500 0.00 0.00 32.90 2.71
2238 2397 8.535335 AGAATCTAGAAGAATAGAAGTGCACAA 58.465 33.333 21.04 1.29 35.48 3.33
2286 2445 4.994852 GTGCACACCTGTTCTTATCAGTTA 59.005 41.667 13.17 0.00 0.00 2.24
2313 2472 5.065731 TCACATCACATACGCATGCAAATAA 59.934 36.000 19.57 0.00 35.39 1.40
2519 2718 5.562696 GCAACCATGTATGCGCTTTATATGT 60.563 40.000 9.73 0.00 32.17 2.29
2568 2773 4.732784 ACGCAATAAAGGTAGCAATGTTG 58.267 39.130 0.00 0.00 0.00 3.33
2615 2820 5.263968 TCAGAGCAAGGCTAATAGTGTAC 57.736 43.478 0.00 0.00 39.88 2.90
2616 2821 4.045104 CAGAGCAAGGCTAATAGTGTACG 58.955 47.826 0.00 0.00 39.88 3.67
2634 2842 8.246430 AGTGTACGGATCTAGGATTTTTATCA 57.754 34.615 0.00 0.00 0.00 2.15
2660 2868 5.705902 ACTTGTATTTGGCGTTAAATGGAC 58.294 37.500 8.61 2.52 32.79 4.02
2675 2883 9.279904 CGTTAAATGGACTTTTATCGCAAATAA 57.720 29.630 7.67 0.00 31.48 1.40
2693 2917 8.073768 CGCAAATAAAGGGATACGTCAATTTAT 58.926 33.333 0.00 0.00 32.43 1.40
2773 2997 5.951747 GCCATCCCTTTATTATGCTGGAATA 59.048 40.000 0.00 0.00 0.00 1.75
2800 3024 4.517453 TGCTTCTACGTTTGGCTAAATGTT 59.483 37.500 23.19 9.64 41.94 2.71
2880 3104 5.536497 AACTTTTGTATTGGATCCCTCCT 57.464 39.130 9.90 0.00 42.59 3.69
2896 3120 1.411977 CTCCTGAGTCCTACATGGCAG 59.588 57.143 0.00 0.00 35.26 4.85
2897 3121 1.198713 CCTGAGTCCTACATGGCAGT 58.801 55.000 0.00 0.00 35.26 4.40
2899 3123 0.817654 TGAGTCCTACATGGCAGTCG 59.182 55.000 0.00 0.00 35.26 4.18
2923 3147 2.547855 GGATGGTCAACAAAGGGCAAAC 60.548 50.000 0.00 0.00 0.00 2.93
3075 3349 4.978083 CCATGTCAAAATGGGAAGAGAG 57.022 45.455 0.00 0.00 43.02 3.20
3126 3400 3.220674 AGAAGCAAAGAAGACCAAGCT 57.779 42.857 0.00 0.00 0.00 3.74
3171 3445 2.350863 AAAAATTACCCCCATGGCCA 57.649 45.000 8.56 8.56 37.83 5.36
3172 3446 1.878211 AAAATTACCCCCATGGCCAG 58.122 50.000 13.05 3.10 37.83 4.85
3173 3447 0.031212 AAATTACCCCCATGGCCAGG 60.031 55.000 13.05 12.17 37.83 4.45
3388 3662 3.502237 GACGGAGCTACGGTTTCAA 57.498 52.632 24.83 0.00 38.39 2.69
3389 3663 1.066136 GACGGAGCTACGGTTTCAAC 58.934 55.000 24.83 1.00 38.39 3.18
3390 3664 0.390124 ACGGAGCTACGGTTTCAACA 59.610 50.000 24.83 0.00 38.39 3.33
3391 3665 1.001633 ACGGAGCTACGGTTTCAACAT 59.998 47.619 24.83 0.00 38.39 2.71
3392 3666 2.231964 ACGGAGCTACGGTTTCAACATA 59.768 45.455 24.83 0.00 38.39 2.29
3393 3667 2.858344 CGGAGCTACGGTTTCAACATAG 59.142 50.000 11.59 0.00 0.00 2.23
3394 3668 3.195661 GGAGCTACGGTTTCAACATAGG 58.804 50.000 0.00 0.00 0.00 2.57
3395 3669 3.195661 GAGCTACGGTTTCAACATAGGG 58.804 50.000 0.00 0.00 0.00 3.53
3396 3670 2.093128 AGCTACGGTTTCAACATAGGGG 60.093 50.000 0.00 0.00 0.00 4.79
3397 3671 2.285977 CTACGGTTTCAACATAGGGGC 58.714 52.381 0.00 0.00 0.00 5.80
3398 3672 0.323087 ACGGTTTCAACATAGGGGCC 60.323 55.000 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.413812 ACATGTGAGTGCAGTGAGTGA 59.586 47.619 0.00 0.00 0.00 3.41
1 2 1.529865 CACATGTGAGTGCAGTGAGTG 59.470 52.381 21.64 0.00 32.04 3.51
2 3 1.139654 ACACATGTGAGTGCAGTGAGT 59.860 47.619 31.94 1.87 43.23 3.41
3 4 1.875009 ACACATGTGAGTGCAGTGAG 58.125 50.000 31.94 1.10 43.23 3.51
15 16 2.291475 TGGCCCATTCATACACACATGT 60.291 45.455 0.00 0.00 43.30 3.21
16 17 2.377073 TGGCCCATTCATACACACATG 58.623 47.619 0.00 0.00 0.00 3.21
17 18 2.824689 TGGCCCATTCATACACACAT 57.175 45.000 0.00 0.00 0.00 3.21
18 19 2.040947 TCTTGGCCCATTCATACACACA 59.959 45.455 0.00 0.00 0.00 3.72
19 20 2.684881 CTCTTGGCCCATTCATACACAC 59.315 50.000 0.00 0.00 0.00 3.82
20 21 2.575735 TCTCTTGGCCCATTCATACACA 59.424 45.455 0.00 0.00 0.00 3.72
21 22 3.281727 TCTCTTGGCCCATTCATACAC 57.718 47.619 0.00 0.00 0.00 2.90
22 23 4.524802 ATTCTCTTGGCCCATTCATACA 57.475 40.909 0.00 0.00 0.00 2.29
23 24 5.360714 TGAAATTCTCTTGGCCCATTCATAC 59.639 40.000 0.00 0.00 0.00 2.39
24 25 5.517924 TGAAATTCTCTTGGCCCATTCATA 58.482 37.500 0.00 0.00 0.00 2.15
25 26 4.355549 TGAAATTCTCTTGGCCCATTCAT 58.644 39.130 0.00 0.00 0.00 2.57
26 27 3.765511 CTGAAATTCTCTTGGCCCATTCA 59.234 43.478 0.00 0.00 0.00 2.57
27 28 4.019174 TCTGAAATTCTCTTGGCCCATTC 58.981 43.478 0.00 0.00 0.00 2.67
28 29 4.051661 TCTGAAATTCTCTTGGCCCATT 57.948 40.909 0.00 0.00 0.00 3.16
29 30 3.744940 TCTGAAATTCTCTTGGCCCAT 57.255 42.857 0.00 0.00 0.00 4.00
30 31 3.524095 TTCTGAAATTCTCTTGGCCCA 57.476 42.857 0.00 0.00 0.00 5.36
31 32 5.411831 AAATTCTGAAATTCTCTTGGCCC 57.588 39.130 0.00 0.00 33.93 5.80
32 33 7.606349 ACTAAAATTCTGAAATTCTCTTGGCC 58.394 34.615 0.00 0.00 33.93 5.36
33 34 8.919661 CAACTAAAATTCTGAAATTCTCTTGGC 58.080 33.333 0.00 0.00 33.93 4.52
34 35 9.415544 CCAACTAAAATTCTGAAATTCTCTTGG 57.584 33.333 0.00 1.19 33.93 3.61
35 36 9.415544 CCCAACTAAAATTCTGAAATTCTCTTG 57.584 33.333 0.00 0.00 33.93 3.02
36 37 8.090831 GCCCAACTAAAATTCTGAAATTCTCTT 58.909 33.333 0.00 0.00 33.93 2.85
37 38 7.452813 AGCCCAACTAAAATTCTGAAATTCTCT 59.547 33.333 0.00 0.00 33.93 3.10
38 39 7.606349 AGCCCAACTAAAATTCTGAAATTCTC 58.394 34.615 0.00 0.00 33.93 2.87
39 40 7.544804 AGCCCAACTAAAATTCTGAAATTCT 57.455 32.000 0.00 0.00 33.93 2.40
40 41 8.498358 CAAAGCCCAACTAAAATTCTGAAATTC 58.502 33.333 0.00 0.00 33.93 2.17
41 42 7.445096 CCAAAGCCCAACTAAAATTCTGAAATT 59.555 33.333 0.00 0.00 36.64 1.82
42 43 6.936335 CCAAAGCCCAACTAAAATTCTGAAAT 59.064 34.615 0.00 0.00 0.00 2.17
43 44 6.287525 CCAAAGCCCAACTAAAATTCTGAAA 58.712 36.000 0.00 0.00 0.00 2.69
44 45 5.221621 CCCAAAGCCCAACTAAAATTCTGAA 60.222 40.000 0.00 0.00 0.00 3.02
45 46 4.283212 CCCAAAGCCCAACTAAAATTCTGA 59.717 41.667 0.00 0.00 0.00 3.27
46 47 4.568956 CCCAAAGCCCAACTAAAATTCTG 58.431 43.478 0.00 0.00 0.00 3.02
47 48 3.007940 GCCCAAAGCCCAACTAAAATTCT 59.992 43.478 0.00 0.00 34.35 2.40
48 49 3.334691 GCCCAAAGCCCAACTAAAATTC 58.665 45.455 0.00 0.00 34.35 2.17
49 50 3.417069 GCCCAAAGCCCAACTAAAATT 57.583 42.857 0.00 0.00 34.35 1.82
69 70 4.142160 GGAATTTTGCTAGTAGGCCTTTGG 60.142 45.833 12.58 2.81 0.00 3.28
70 71 4.462483 TGGAATTTTGCTAGTAGGCCTTTG 59.538 41.667 12.58 0.00 0.00 2.77
71 72 4.672899 TGGAATTTTGCTAGTAGGCCTTT 58.327 39.130 12.58 1.84 0.00 3.11
72 73 4.316025 TGGAATTTTGCTAGTAGGCCTT 57.684 40.909 12.58 0.00 0.00 4.35
73 74 4.017126 GTTGGAATTTTGCTAGTAGGCCT 58.983 43.478 11.78 11.78 0.00 5.19
74 75 3.761752 TGTTGGAATTTTGCTAGTAGGCC 59.238 43.478 0.00 0.00 0.00 5.19
75 76 4.459337 ACTGTTGGAATTTTGCTAGTAGGC 59.541 41.667 0.00 0.00 0.00 3.93
76 77 6.575162 AACTGTTGGAATTTTGCTAGTAGG 57.425 37.500 0.00 0.00 0.00 3.18
77 78 9.774742 GATAAACTGTTGGAATTTTGCTAGTAG 57.225 33.333 0.00 0.00 0.00 2.57
78 79 9.290988 TGATAAACTGTTGGAATTTTGCTAGTA 57.709 29.630 0.00 0.00 0.00 1.82
79 80 8.177119 TGATAAACTGTTGGAATTTTGCTAGT 57.823 30.769 0.00 0.00 0.00 2.57
80 81 7.274250 GCTGATAAACTGTTGGAATTTTGCTAG 59.726 37.037 0.00 0.00 0.00 3.42
81 82 7.039784 AGCTGATAAACTGTTGGAATTTTGCTA 60.040 33.333 0.00 0.00 0.00 3.49
82 83 5.928264 GCTGATAAACTGTTGGAATTTTGCT 59.072 36.000 0.00 0.00 0.00 3.91
83 84 5.928264 AGCTGATAAACTGTTGGAATTTTGC 59.072 36.000 0.00 0.00 0.00 3.68
84 85 6.366877 CCAGCTGATAAACTGTTGGAATTTTG 59.633 38.462 17.39 0.00 46.08 2.44
85 86 6.458210 CCAGCTGATAAACTGTTGGAATTTT 58.542 36.000 17.39 0.00 46.08 1.82
86 87 5.567423 GCCAGCTGATAAACTGTTGGAATTT 60.567 40.000 17.39 0.00 46.08 1.82
87 88 4.082026 GCCAGCTGATAAACTGTTGGAATT 60.082 41.667 17.39 0.00 46.08 2.17
88 89 3.445096 GCCAGCTGATAAACTGTTGGAAT 59.555 43.478 17.39 0.00 46.08 3.01
89 90 2.819608 GCCAGCTGATAAACTGTTGGAA 59.180 45.455 17.39 0.00 46.08 3.53
90 91 2.224744 TGCCAGCTGATAAACTGTTGGA 60.225 45.455 17.39 0.00 46.08 3.53
91 92 2.161855 TGCCAGCTGATAAACTGTTGG 58.838 47.619 17.39 0.00 45.99 3.77
92 93 3.829948 CTTGCCAGCTGATAAACTGTTG 58.170 45.455 17.39 0.00 31.76 3.33
93 94 2.229784 GCTTGCCAGCTGATAAACTGTT 59.770 45.455 17.39 0.00 43.51 3.16
94 95 1.815003 GCTTGCCAGCTGATAAACTGT 59.185 47.619 17.39 0.00 43.51 3.55
95 96 1.133790 GGCTTGCCAGCTGATAAACTG 59.866 52.381 17.39 0.00 46.44 3.16
96 97 1.467920 GGCTTGCCAGCTGATAAACT 58.532 50.000 17.39 0.00 46.44 2.66
97 98 0.457443 GGGCTTGCCAGCTGATAAAC 59.543 55.000 17.39 5.08 46.44 2.01
98 99 1.031571 CGGGCTTGCCAGCTGATAAA 61.032 55.000 17.39 5.40 46.44 1.40
99 100 1.451927 CGGGCTTGCCAGCTGATAA 60.452 57.895 17.39 8.83 46.44 1.75
100 101 2.190313 CGGGCTTGCCAGCTGATA 59.810 61.111 17.39 0.00 46.44 2.15
101 102 4.809496 CCGGGCTTGCCAGCTGAT 62.809 66.667 17.39 0.00 46.44 2.90
106 107 3.211963 GTATGCCGGGCTTGCCAG 61.212 66.667 21.46 9.40 0.00 4.85
129 130 0.319083 ACACTCGTTCAATACCCGCA 59.681 50.000 0.00 0.00 0.00 5.69
130 131 0.719465 CACACTCGTTCAATACCCGC 59.281 55.000 0.00 0.00 0.00 6.13
135 136 6.548251 TGGATATCTACCACACTCGTTCAATA 59.452 38.462 2.05 0.00 32.03 1.90
160 161 3.263425 ACGTTTACTTGATGGGATGGAGT 59.737 43.478 0.00 0.00 0.00 3.85
162 163 3.517901 AGACGTTTACTTGATGGGATGGA 59.482 43.478 0.00 0.00 0.00 3.41
193 194 1.144969 CGGTATCCGCGCATGTTTAT 58.855 50.000 8.75 0.00 41.17 1.40
195 196 3.405464 CGGTATCCGCGCATGTTT 58.595 55.556 8.75 0.00 41.17 2.83
205 206 1.689273 AGAACAGCATCCTCGGTATCC 59.311 52.381 0.00 0.00 0.00 2.59
208 209 2.688446 CACTAGAACAGCATCCTCGGTA 59.312 50.000 0.00 0.00 0.00 4.02
213 214 3.030291 CCTCTCACTAGAACAGCATCCT 58.970 50.000 0.00 0.00 0.00 3.24
217 218 0.898320 GGCCTCTCACTAGAACAGCA 59.102 55.000 0.00 0.00 0.00 4.41
222 223 0.833287 GGCATGGCCTCTCACTAGAA 59.167 55.000 8.35 0.00 46.69 2.10
223 224 2.521103 GGCATGGCCTCTCACTAGA 58.479 57.895 8.35 0.00 46.69 2.43
243 285 3.447025 ATTGACGCCGGCCTAGAGC 62.447 63.158 23.46 4.32 42.60 4.09
303 345 1.964373 ATGCTTTTTCGCCCGACGT 60.964 52.632 0.00 0.00 44.19 4.34
313 355 1.974543 CCTTCCCCGCATGCTTTTT 59.025 52.632 17.13 0.00 0.00 1.94
314 356 2.649129 GCCTTCCCCGCATGCTTTT 61.649 57.895 17.13 0.00 0.00 2.27
328 370 0.107017 CATCCAAGACCATCCGCCTT 60.107 55.000 0.00 0.00 0.00 4.35
332 374 0.179045 GTCCCATCCAAGACCATCCG 60.179 60.000 0.00 0.00 0.00 4.18
340 382 2.276740 GCCCCTGTCCCATCCAAG 59.723 66.667 0.00 0.00 0.00 3.61
368 424 0.951040 GGACTTTGCGAGTGTCCAGG 60.951 60.000 18.11 0.00 46.79 4.45
377 433 0.319555 CGAAGTGAGGGACTTTGCGA 60.320 55.000 0.00 0.00 45.48 5.10
385 441 0.471211 ACTGGGAACGAAGTGAGGGA 60.471 55.000 0.00 0.00 45.00 4.20
448 504 5.618561 GTTTCTTGTCATCCAACACGATAC 58.381 41.667 0.00 0.00 28.89 2.24
449 505 4.387559 CGTTTCTTGTCATCCAACACGATA 59.612 41.667 0.00 0.00 31.87 2.92
452 508 2.286833 ACGTTTCTTGTCATCCAACACG 59.713 45.455 0.00 0.00 34.41 4.49
468 524 0.176219 TCCACACAGTTCGGACGTTT 59.824 50.000 0.00 0.00 0.00 3.60
471 527 3.932289 GTCCACACAGTTCGGACG 58.068 61.111 2.91 0.00 39.86 4.79
484 540 1.067846 CATCGACTCTCAAACCGTCCA 60.068 52.381 0.00 0.00 0.00 4.02
490 546 5.669848 GCATCTTCAACATCGACTCTCAAAC 60.670 44.000 0.00 0.00 0.00 2.93
501 557 6.455360 TGAATTTAGGGCATCTTCAACATC 57.545 37.500 0.00 0.00 0.00 3.06
502 558 6.183360 CCATGAATTTAGGGCATCTTCAACAT 60.183 38.462 0.00 0.00 30.39 2.71
503 559 5.127519 CCATGAATTTAGGGCATCTTCAACA 59.872 40.000 0.00 0.00 30.39 3.33
516 572 3.119531 TCGGCAAAGCACCATGAATTTAG 60.120 43.478 0.00 0.00 0.00 1.85
520 576 0.813184 CTCGGCAAAGCACCATGAAT 59.187 50.000 0.00 0.00 0.00 2.57
526 582 1.235724 AAACTACTCGGCAAAGCACC 58.764 50.000 0.00 0.00 0.00 5.01
570 631 3.498777 GCCGAGTATTCAAAGGGCTATTC 59.501 47.826 0.00 0.00 37.57 1.75
571 632 3.118038 TGCCGAGTATTCAAAGGGCTATT 60.118 43.478 1.29 0.00 41.08 1.73
572 633 2.438021 TGCCGAGTATTCAAAGGGCTAT 59.562 45.455 1.29 0.00 41.08 2.97
573 634 1.834896 TGCCGAGTATTCAAAGGGCTA 59.165 47.619 1.29 0.00 41.08 3.93
574 635 0.618458 TGCCGAGTATTCAAAGGGCT 59.382 50.000 1.29 0.00 41.08 5.19
575 636 1.680338 ATGCCGAGTATTCAAAGGGC 58.320 50.000 0.00 0.00 40.88 5.19
576 637 4.073293 AGTATGCCGAGTATTCAAAGGG 57.927 45.455 0.00 0.00 0.00 3.95
577 638 6.316390 AGAAAAGTATGCCGAGTATTCAAAGG 59.684 38.462 0.00 0.00 0.00 3.11
578 639 7.182761 CAGAAAAGTATGCCGAGTATTCAAAG 58.817 38.462 0.00 0.00 0.00 2.77
579 640 6.093495 CCAGAAAAGTATGCCGAGTATTCAAA 59.907 38.462 0.00 0.00 0.00 2.69
580 641 5.584649 CCAGAAAAGTATGCCGAGTATTCAA 59.415 40.000 0.00 0.00 0.00 2.69
591 652 2.128771 TCCCAGCCAGAAAAGTATGC 57.871 50.000 0.00 0.00 0.00 3.14
592 653 5.041191 AGTATCCCAGCCAGAAAAGTATG 57.959 43.478 0.00 0.00 0.00 2.39
593 654 5.905913 ACTAGTATCCCAGCCAGAAAAGTAT 59.094 40.000 0.00 0.00 0.00 2.12
595 656 4.104831 ACTAGTATCCCAGCCAGAAAAGT 58.895 43.478 0.00 0.00 0.00 2.66
596 657 4.762289 ACTAGTATCCCAGCCAGAAAAG 57.238 45.455 0.00 0.00 0.00 2.27
731 807 1.537202 CTTGAAGTTTTCAGCGAGGGG 59.463 52.381 0.00 0.00 41.38 4.79
786 862 1.606668 TGAAATGGACAAGCGTGGAAC 59.393 47.619 4.26 0.00 0.00 3.62
787 863 1.974265 TGAAATGGACAAGCGTGGAA 58.026 45.000 4.26 0.00 0.00 3.53
883 959 4.478371 GGGTAAACGGGGAGCGGG 62.478 72.222 0.00 0.00 0.00 6.13
895 971 1.342275 TGGTAGCTAGGCGAAGGGTAA 60.342 52.381 0.00 0.00 0.00 2.85
896 972 0.259647 TGGTAGCTAGGCGAAGGGTA 59.740 55.000 0.00 0.00 0.00 3.69
897 973 1.001248 TGGTAGCTAGGCGAAGGGT 59.999 57.895 0.00 0.00 0.00 4.34
898 974 1.043673 AGTGGTAGCTAGGCGAAGGG 61.044 60.000 0.00 0.00 0.00 3.95
899 975 1.337387 GTAGTGGTAGCTAGGCGAAGG 59.663 57.143 0.00 0.00 0.00 3.46
900 976 2.299521 AGTAGTGGTAGCTAGGCGAAG 58.700 52.381 0.00 0.00 0.00 3.79
901 977 2.431954 AGTAGTGGTAGCTAGGCGAA 57.568 50.000 0.00 0.00 0.00 4.70
902 978 2.295885 GAAGTAGTGGTAGCTAGGCGA 58.704 52.381 0.00 0.00 0.00 5.54
903 979 2.022195 TGAAGTAGTGGTAGCTAGGCG 58.978 52.381 0.00 0.00 0.00 5.52
904 980 3.025262 AGTGAAGTAGTGGTAGCTAGGC 58.975 50.000 0.00 0.00 0.00 3.93
905 981 3.312973 CGAGTGAAGTAGTGGTAGCTAGG 59.687 52.174 0.00 0.00 0.00 3.02
906 982 3.940221 ACGAGTGAAGTAGTGGTAGCTAG 59.060 47.826 0.00 0.00 0.00 3.42
907 983 3.937706 GACGAGTGAAGTAGTGGTAGCTA 59.062 47.826 0.00 0.00 0.00 3.32
908 984 2.748532 GACGAGTGAAGTAGTGGTAGCT 59.251 50.000 0.00 0.00 0.00 3.32
909 985 2.475852 CGACGAGTGAAGTAGTGGTAGC 60.476 54.545 0.00 0.00 0.00 3.58
910 986 2.740981 ACGACGAGTGAAGTAGTGGTAG 59.259 50.000 0.00 0.00 0.00 3.18
911 987 2.771089 ACGACGAGTGAAGTAGTGGTA 58.229 47.619 0.00 0.00 0.00 3.25
912 988 1.602311 ACGACGAGTGAAGTAGTGGT 58.398 50.000 0.00 0.00 0.00 4.16
938 1014 2.574369 TGGTGTAGAATGTAAGGGGTGG 59.426 50.000 0.00 0.00 0.00 4.61
941 1017 3.118371 GGAGTGGTGTAGAATGTAAGGGG 60.118 52.174 0.00 0.00 0.00 4.79
947 1023 2.029290 GTCGTGGAGTGGTGTAGAATGT 60.029 50.000 0.00 0.00 0.00 2.71
954 1030 1.585006 GATCGTCGTGGAGTGGTGT 59.415 57.895 0.00 0.00 0.00 4.16
1179 1278 2.359230 GGGAGCAACAGAGCGCTT 60.359 61.111 13.26 0.00 38.99 4.68
1215 1314 3.916392 AAGAACGACTGGGCTCGCG 62.916 63.158 0.00 0.00 37.15 5.87
1216 1315 2.048127 AAGAACGACTGGGCTCGC 60.048 61.111 0.00 0.00 37.15 5.03
1217 1316 2.383527 GCAAGAACGACTGGGCTCG 61.384 63.158 0.00 0.00 39.68 5.03
1218 1317 1.004440 AGCAAGAACGACTGGGCTC 60.004 57.895 0.00 0.00 35.96 4.70
1219 1318 1.302033 CAGCAAGAACGACTGGGCT 60.302 57.895 0.00 0.00 39.52 5.19
1220 1319 1.301716 TCAGCAAGAACGACTGGGC 60.302 57.895 0.00 0.00 32.19 5.36
1221 1320 1.284982 CGTCAGCAAGAACGACTGGG 61.285 60.000 0.00 0.00 32.19 4.45
1222 1321 1.284982 CCGTCAGCAAGAACGACTGG 61.285 60.000 0.00 0.00 32.19 4.00
1223 1322 1.891060 GCCGTCAGCAAGAACGACTG 61.891 60.000 0.00 0.00 42.97 3.51
1224 1323 1.664965 GCCGTCAGCAAGAACGACT 60.665 57.895 0.00 0.00 42.97 4.18
1225 1324 2.853914 GCCGTCAGCAAGAACGAC 59.146 61.111 0.00 0.00 42.97 4.34
1226 1325 2.733218 CGCCGTCAGCAAGAACGA 60.733 61.111 0.00 0.00 44.04 3.85
1227 1326 3.777925 CCGCCGTCAGCAAGAACG 61.778 66.667 0.00 0.00 44.04 3.95
1391 1493 3.431725 GCTTGTTTCCTCCGCCGG 61.432 66.667 0.00 0.00 0.00 6.13
1398 1500 2.358737 CTCGGCGGCTTGTTTCCT 60.359 61.111 7.21 0.00 0.00 3.36
1420 1531 0.311477 GTCCTCGCGATCCTCCTAAC 59.689 60.000 10.36 0.00 0.00 2.34
1479 1590 0.313987 CGCCCTTCCTCCAAACAAAC 59.686 55.000 0.00 0.00 0.00 2.93
1708 1819 4.760047 CCTCACCGACCCCTTGCG 62.760 72.222 0.00 0.00 0.00 4.85
1891 2048 3.055312 GGGGTCAGAATAGGACTTTCGTT 60.055 47.826 0.00 0.00 35.61 3.85
1893 2050 2.481449 CGGGGTCAGAATAGGACTTTCG 60.481 54.545 0.00 0.00 35.61 3.46
1894 2051 2.764572 TCGGGGTCAGAATAGGACTTTC 59.235 50.000 0.00 0.00 35.61 2.62
1895 2052 2.766828 CTCGGGGTCAGAATAGGACTTT 59.233 50.000 0.00 0.00 35.61 2.66
1896 2053 2.389715 CTCGGGGTCAGAATAGGACTT 58.610 52.381 0.00 0.00 35.61 3.01
1897 2054 2.030045 GCTCGGGGTCAGAATAGGACT 61.030 57.143 0.00 0.00 35.61 3.85
1898 2055 0.389757 GCTCGGGGTCAGAATAGGAC 59.610 60.000 0.00 0.00 34.52 3.85
1899 2056 0.261991 AGCTCGGGGTCAGAATAGGA 59.738 55.000 0.00 0.00 0.00 2.94
1900 2057 0.676736 GAGCTCGGGGTCAGAATAGG 59.323 60.000 10.21 0.00 39.51 2.57
1901 2058 1.403814 TGAGCTCGGGGTCAGAATAG 58.596 55.000 14.37 0.00 43.82 1.73
1902 2059 3.607871 TGAGCTCGGGGTCAGAATA 57.392 52.632 14.37 0.00 43.82 1.75
1903 2060 4.461119 TGAGCTCGGGGTCAGAAT 57.539 55.556 14.37 0.00 43.82 2.40
1907 2064 1.377202 GCATTTGAGCTCGGGGTCA 60.377 57.895 14.37 14.37 46.48 4.02
1908 2065 0.749454 ATGCATTTGAGCTCGGGGTC 60.749 55.000 7.76 7.76 40.08 4.46
1909 2066 1.033746 CATGCATTTGAGCTCGGGGT 61.034 55.000 9.64 0.00 34.99 4.95
1910 2067 1.033746 ACATGCATTTGAGCTCGGGG 61.034 55.000 9.64 0.00 34.99 5.73
1911 2068 0.813184 AACATGCATTTGAGCTCGGG 59.187 50.000 9.64 0.00 34.99 5.14
1912 2069 2.642139 AAACATGCATTTGAGCTCGG 57.358 45.000 9.64 0.00 34.99 4.63
1913 2070 4.030977 GCTTAAAACATGCATTTGAGCTCG 59.969 41.667 23.09 0.00 42.67 5.03
1914 2071 4.925054 TGCTTAAAACATGCATTTGAGCTC 59.075 37.500 26.94 6.82 44.84 4.09
1915 2072 4.885413 TGCTTAAAACATGCATTTGAGCT 58.115 34.783 26.94 0.00 44.84 4.09
1916 2073 5.594724 TTGCTTAAAACATGCATTTGAGC 57.405 34.783 23.37 23.37 44.82 4.26
1955 2112 7.339721 TGTGTTCTGTTGTTTAGGAAATGGTAA 59.660 33.333 0.00 0.00 0.00 2.85
1961 2118 5.473846 TGTGTGTGTTCTGTTGTTTAGGAAA 59.526 36.000 0.00 0.00 0.00 3.13
1983 2140 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1985 2142 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1986 2143 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1987 2144 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1990 2147 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1992 2149 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1995 2152 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1996 2153 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1998 2155 0.167908 GGTGTGTGTGTGTGTGTGTG 59.832 55.000 0.00 0.00 0.00 3.82
1999 2156 0.250510 TGGTGTGTGTGTGTGTGTGT 60.251 50.000 0.00 0.00 0.00 3.72
2000 2157 0.877743 TTGGTGTGTGTGTGTGTGTG 59.122 50.000 0.00 0.00 0.00 3.82
2001 2158 0.878416 GTTGGTGTGTGTGTGTGTGT 59.122 50.000 0.00 0.00 0.00 3.72
2002 2159 0.877743 TGTTGGTGTGTGTGTGTGTG 59.122 50.000 0.00 0.00 0.00 3.82
2003 2160 1.610363 TTGTTGGTGTGTGTGTGTGT 58.390 45.000 0.00 0.00 0.00 3.72
2004 2161 2.423185 AGATTGTTGGTGTGTGTGTGTG 59.577 45.455 0.00 0.00 0.00 3.82
2006 2163 4.891627 TTAGATTGTTGGTGTGTGTGTG 57.108 40.909 0.00 0.00 0.00 3.82
2014 2171 7.921786 TTTCTACCAGATTAGATTGTTGGTG 57.078 36.000 4.81 0.00 41.90 4.17
2015 2172 8.164070 ACTTTTCTACCAGATTAGATTGTTGGT 58.836 33.333 0.00 0.00 44.00 3.67
2016 2173 8.567285 ACTTTTCTACCAGATTAGATTGTTGG 57.433 34.615 0.00 0.00 35.07 3.77
2023 2180 9.712305 CTTCAGAAACTTTTCTACCAGATTAGA 57.288 33.333 3.91 0.00 45.23 2.10
2032 2189 9.657121 CAGAATGAACTTCAGAAACTTTTCTAC 57.343 33.333 3.91 0.00 41.84 2.59
2055 2212 1.409064 GTCATGGAGACCGCATACAGA 59.591 52.381 0.00 0.00 41.56 3.41
2074 2231 6.297080 TCAAAATTGATAATGTGCCCATGT 57.703 33.333 0.00 0.00 31.01 3.21
2110 2267 2.995283 TCGAGACTCGATTTGGGAGTA 58.005 47.619 23.27 0.00 44.82 2.59
2132 2289 2.591715 GGGATGGGCGGATGTTCG 60.592 66.667 0.00 0.00 0.00 3.95
2151 2308 5.140747 AGAGTGACTAAAACAGCAGTAGG 57.859 43.478 0.00 0.00 0.00 3.18
2152 2309 4.854291 CGAGAGTGACTAAAACAGCAGTAG 59.146 45.833 0.00 0.00 0.00 2.57
2154 2311 3.318275 TCGAGAGTGACTAAAACAGCAGT 59.682 43.478 0.00 0.00 0.00 4.40
2155 2312 3.902150 TCGAGAGTGACTAAAACAGCAG 58.098 45.455 0.00 0.00 0.00 4.24
2158 2315 4.167554 AGCTCGAGAGTGACTAAAACAG 57.832 45.455 18.75 0.00 0.00 3.16
2233 2392 7.707774 TTAGTTTAATTTCAGCCTTTTGTGC 57.292 32.000 0.00 0.00 0.00 4.57
2238 2397 9.845740 ACCAAATTTAGTTTAATTTCAGCCTTT 57.154 25.926 0.00 0.00 35.98 3.11
2272 2431 9.500785 TGTGATGTGAAATAACTGATAAGAACA 57.499 29.630 0.00 0.00 0.00 3.18
2286 2445 3.377798 TGCATGCGTATGTGATGTGAAAT 59.622 39.130 14.09 0.00 36.65 2.17
2313 2472 7.586747 CCAGCAGAAACATTTTTGCATTATTT 58.413 30.769 18.69 0.00 46.94 1.40
2411 2610 6.447162 CGATACTTTATCTGTCAGCCATACA 58.553 40.000 0.00 0.00 33.01 2.29
2415 2614 3.384789 AGCGATACTTTATCTGTCAGCCA 59.615 43.478 0.00 0.00 33.01 4.75
2568 2773 2.723618 CGTTAACTGCAACCGCACATAC 60.724 50.000 3.71 0.00 45.36 2.39
2588 2793 5.804473 CACTATTAGCCTTGCTCTGATATCG 59.196 44.000 0.00 0.00 40.44 2.92
2634 2842 7.971722 GTCCATTTAACGCCAAATACAAGTAAT 59.028 33.333 0.00 0.00 0.00 1.89
2660 2868 7.636326 ACGTATCCCTTTATTTGCGATAAAAG 58.364 34.615 0.00 4.70 0.00 2.27
2675 2883 5.820947 GTGACCATAAATTGACGTATCCCTT 59.179 40.000 0.00 0.00 0.00 3.95
2731 2955 3.491208 CAGCAAAGCCTCTGCCTAT 57.509 52.632 0.00 0.00 40.86 2.57
2773 2997 5.699097 TTAGCCAAACGTAGAAGCAAAAT 57.301 34.783 0.00 0.00 0.00 1.82
2880 3104 0.817654 CGACTGCCATGTAGGACTCA 59.182 55.000 0.00 0.00 41.22 3.41
2896 3120 1.197721 CTTTGTTGACCATCCAGCGAC 59.802 52.381 0.00 0.00 0.00 5.19
2897 3121 1.522668 CTTTGTTGACCATCCAGCGA 58.477 50.000 0.00 0.00 0.00 4.93
2899 3123 0.890683 CCCTTTGTTGACCATCCAGC 59.109 55.000 0.00 0.00 0.00 4.85
2923 3147 2.286418 GCTTGGACTTGTGTTGACTTCG 60.286 50.000 0.00 0.00 0.00 3.79
3073 3347 8.774586 TCAGCTTTCACTTGTTCTTTTATACTC 58.225 33.333 0.00 0.00 0.00 2.59
3074 3348 8.677148 TCAGCTTTCACTTGTTCTTTTATACT 57.323 30.769 0.00 0.00 0.00 2.12
3075 3349 9.387123 CTTCAGCTTTCACTTGTTCTTTTATAC 57.613 33.333 0.00 0.00 0.00 1.47
3370 3644 1.066136 GTTGAAACCGTAGCTCCGTC 58.934 55.000 0.00 0.00 0.00 4.79
3371 3645 0.390124 TGTTGAAACCGTAGCTCCGT 59.610 50.000 0.00 0.00 0.00 4.69
3372 3646 1.722011 ATGTTGAAACCGTAGCTCCG 58.278 50.000 0.00 0.00 0.00 4.63
3373 3647 3.195661 CCTATGTTGAAACCGTAGCTCC 58.804 50.000 0.00 0.00 0.00 4.70
3374 3648 3.195661 CCCTATGTTGAAACCGTAGCTC 58.804 50.000 0.00 0.00 0.00 4.09
3375 3649 2.093128 CCCCTATGTTGAAACCGTAGCT 60.093 50.000 0.00 0.00 0.00 3.32
3376 3650 2.285977 CCCCTATGTTGAAACCGTAGC 58.714 52.381 0.00 0.00 0.00 3.58
3377 3651 2.285977 GCCCCTATGTTGAAACCGTAG 58.714 52.381 0.00 0.00 0.00 3.51
3378 3652 1.065272 GGCCCCTATGTTGAAACCGTA 60.065 52.381 0.00 0.00 0.00 4.02
3379 3653 0.323087 GGCCCCTATGTTGAAACCGT 60.323 55.000 0.00 0.00 0.00 4.83
3380 3654 2.489040 GGCCCCTATGTTGAAACCG 58.511 57.895 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.