Multiple sequence alignment - TraesCS3A01G481500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G481500 chr3A 100.000 3225 0 0 1 3225 712544178 712547402 0.000000e+00 5956.0
1 TraesCS3A01G481500 chr3A 88.281 1024 108 11 1214 2231 711286424 711285407 0.000000e+00 1216.0
2 TraesCS3A01G481500 chr3A 88.787 981 94 10 1251 2220 711260739 711259764 0.000000e+00 1188.0
3 TraesCS3A01G481500 chr3A 88.699 938 95 7 1293 2223 712552977 712553910 0.000000e+00 1134.0
4 TraesCS3A01G481500 chr3D 94.493 1035 53 4 1190 2223 577239357 577240388 0.000000e+00 1592.0
5 TraesCS3A01G481500 chr3D 89.344 976 96 6 1251 2221 575737903 575736931 0.000000e+00 1219.0
6 TraesCS3A01G481500 chr3D 88.224 1019 106 12 1217 2229 575740591 575739581 0.000000e+00 1205.0
7 TraesCS3A01G481500 chr3D 89.185 638 51 12 2463 3093 577241211 577241837 0.000000e+00 780.0
8 TraesCS3A01G481500 chr3D 90.351 342 9 3 133 469 577237922 577238244 8.270000e-116 427.0
9 TraesCS3A01G481500 chr3D 91.698 265 21 1 824 1087 577238246 577238510 1.830000e-97 366.0
10 TraesCS3A01G481500 chr3D 89.105 257 13 3 26 282 577210228 577210469 4.040000e-79 305.0
11 TraesCS3A01G481500 chr3D 92.500 120 8 1 2223 2342 577240445 577240563 1.540000e-38 171.0
12 TraesCS3A01G481500 chr3D 93.258 89 5 1 3095 3182 577241882 577241970 2.610000e-26 130.0
13 TraesCS3A01G481500 chr3D 96.429 56 2 0 2396 2451 577240623 577240678 3.430000e-15 93.5
14 TraesCS3A01G481500 chr3B 94.980 976 46 2 1248 2223 768746743 768745771 0.000000e+00 1528.0
15 TraesCS3A01G481500 chr3B 88.109 1026 107 12 1214 2229 766661594 766660574 0.000000e+00 1205.0
16 TraesCS3A01G481500 chr3B 88.646 960 92 11 1275 2226 766643177 766642227 0.000000e+00 1153.0
17 TraesCS3A01G481500 chr3B 97.078 308 9 0 524 831 536901300 536900993 1.330000e-143 520.0
18 TraesCS3A01G481500 chr3B 95.611 319 12 2 524 842 727161439 727161123 7.980000e-141 510.0
19 TraesCS3A01G481500 chr3B 88.889 396 30 8 2 389 768747549 768747160 2.910000e-130 475.0
20 TraesCS3A01G481500 chr3B 86.494 348 34 9 827 1161 768747106 768746759 1.410000e-98 370.0
21 TraesCS3A01G481500 chr3B 80.144 418 64 11 2507 2913 737412746 737413155 8.750000e-76 294.0
22 TraesCS3A01G481500 chr5A 97.078 308 9 0 524 831 139481495 139481188 1.330000e-143 520.0
23 TraesCS3A01G481500 chr1B 97.068 307 9 0 523 829 588322719 588322413 4.770000e-143 518.0
24 TraesCS3A01G481500 chr1B 97.059 306 9 0 524 829 12757150 12756845 1.720000e-142 516.0
25 TraesCS3A01G481500 chr7A 97.059 306 9 0 524 829 4785068 4784763 1.720000e-142 516.0
26 TraesCS3A01G481500 chr6B 97.049 305 9 0 524 828 551770219 551769915 6.170000e-142 514.0
27 TraesCS3A01G481500 chr7B 96.743 307 10 0 523 829 625247395 625247701 2.220000e-141 512.0
28 TraesCS3A01G481500 chr7B 95.062 324 13 3 506 829 633031194 633030874 1.030000e-139 507.0
29 TraesCS3A01G481500 chr7B 78.356 365 61 13 2564 2918 494575593 494575237 1.510000e-53 220.0
30 TraesCS3A01G481500 chr6D 81.301 369 59 10 2564 2927 20802488 20802125 1.130000e-74 291.0
31 TraesCS3A01G481500 chr4B 82.583 333 46 9 2501 2828 6074300 6073975 1.890000e-72 283.0
32 TraesCS3A01G481500 chr5D 80.845 355 55 12 2532 2880 493275361 493275014 1.910000e-67 267.0
33 TraesCS3A01G481500 chr1A 78.676 408 70 13 2519 2919 524382796 524382399 4.130000e-64 255.0
34 TraesCS3A01G481500 chr7D 77.961 363 63 12 2564 2918 470882506 470882153 9.060000e-51 211.0
35 TraesCS3A01G481500 chr6A 77.508 329 58 14 2598 2916 415024439 415024117 1.980000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G481500 chr3A 712544178 712547402 3224 False 5956.0 5956 100.000000 1 3225 1 chr3A.!!$F1 3224
1 TraesCS3A01G481500 chr3A 711285407 711286424 1017 True 1216.0 1216 88.281000 1214 2231 1 chr3A.!!$R2 1017
2 TraesCS3A01G481500 chr3A 711259764 711260739 975 True 1188.0 1188 88.787000 1251 2220 1 chr3A.!!$R1 969
3 TraesCS3A01G481500 chr3A 712552977 712553910 933 False 1134.0 1134 88.699000 1293 2223 1 chr3A.!!$F2 930
4 TraesCS3A01G481500 chr3D 575736931 575740591 3660 True 1212.0 1219 88.784000 1217 2229 2 chr3D.!!$R1 1012
5 TraesCS3A01G481500 chr3D 577237922 577241970 4048 False 508.5 1592 92.559143 133 3182 7 chr3D.!!$F2 3049
6 TraesCS3A01G481500 chr3B 766660574 766661594 1020 True 1205.0 1205 88.109000 1214 2229 1 chr3B.!!$R4 1015
7 TraesCS3A01G481500 chr3B 766642227 766643177 950 True 1153.0 1153 88.646000 1275 2226 1 chr3B.!!$R3 951
8 TraesCS3A01G481500 chr3B 768745771 768747549 1778 True 791.0 1528 90.121000 2 2223 3 chr3B.!!$R5 2221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
738 754 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.0 4.96 0.0 31.08 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2459 5983 0.330604 TGTCACTCTAGTAGGCCCGT 59.669 55.0 0.0 0.0 0.0 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 6.579865 AGTAAAGTGTGGGTTATAAGATCCG 58.420 40.000 0.00 0.00 0.00 4.18
40 41 6.491062 TGGGTTATAAGATCCGATTTCTCGTA 59.509 38.462 0.00 0.00 43.49 3.43
57 58 3.460103 TCGTAAAACCACTGACTTCACC 58.540 45.455 0.00 0.00 0.00 4.02
66 67 5.235516 ACCACTGACTTCACCGTAAATTAG 58.764 41.667 0.00 0.00 0.00 1.73
75 76 2.599973 CACCGTAAATTAGTTCCGTCCG 59.400 50.000 0.00 0.00 0.00 4.79
77 78 2.599973 CCGTAAATTAGTTCCGTCCGTG 59.400 50.000 0.00 0.00 0.00 4.94
82 83 6.418819 CGTAAATTAGTTCCGTCCGTGATAAT 59.581 38.462 0.00 0.00 0.00 1.28
93 94 1.165907 CGTGATAATGCCCGTGCCAT 61.166 55.000 0.00 0.00 36.33 4.40
96 97 2.031157 GTGATAATGCCCGTGCCATAAC 60.031 50.000 0.00 0.00 36.33 1.89
110 111 2.330286 CCATAACGTACGCACAGACAA 58.670 47.619 16.72 0.00 0.00 3.18
114 115 0.596600 ACGTACGCACAGACAAGTGG 60.597 55.000 16.72 0.00 39.87 4.00
123 130 3.206150 CACAGACAAGTGGCAAGTAACT 58.794 45.455 0.00 0.00 35.88 2.24
131 138 4.473477 AGTGGCAAGTAACTTAGCTAGG 57.527 45.455 0.48 0.48 0.00 3.02
338 354 3.077705 CAACGCGTGTACGATGGG 58.922 61.111 14.98 0.00 43.02 4.00
397 413 2.722094 TCCACAGGCCAATACACATTC 58.278 47.619 5.01 0.00 0.00 2.67
401 417 4.021192 CCACAGGCCAATACACATTCTTTT 60.021 41.667 5.01 0.00 0.00 2.27
445 461 5.368145 CAATACACATACAGGTGCTATGGT 58.632 41.667 0.00 0.00 42.55 3.55
469 485 2.883026 TGGTGGAAAATGGAAACCGAT 58.117 42.857 0.00 0.00 33.41 4.18
470 486 3.235200 TGGTGGAAAATGGAAACCGATT 58.765 40.909 0.00 0.00 33.41 3.34
471 487 3.006323 TGGTGGAAAATGGAAACCGATTG 59.994 43.478 0.00 0.00 33.41 2.67
472 488 3.006430 GGTGGAAAATGGAAACCGATTGT 59.994 43.478 0.00 0.00 0.00 2.71
473 489 3.987220 GTGGAAAATGGAAACCGATTGTG 59.013 43.478 0.00 0.00 0.00 3.33
474 490 3.639094 TGGAAAATGGAAACCGATTGTGT 59.361 39.130 0.00 0.00 0.00 3.72
475 491 4.100189 TGGAAAATGGAAACCGATTGTGTT 59.900 37.500 0.00 0.00 0.00 3.32
476 492 4.684242 GGAAAATGGAAACCGATTGTGTTC 59.316 41.667 0.00 0.00 0.00 3.18
477 493 4.927978 AAATGGAAACCGATTGTGTTCA 57.072 36.364 0.00 0.00 0.00 3.18
478 494 4.927978 AATGGAAACCGATTGTGTTCAA 57.072 36.364 0.00 0.00 37.98 2.69
479 495 4.927978 ATGGAAACCGATTGTGTTCAAA 57.072 36.364 0.00 0.00 37.11 2.69
480 496 4.720649 TGGAAACCGATTGTGTTCAAAA 57.279 36.364 0.00 0.00 37.11 2.44
481 497 5.073311 TGGAAACCGATTGTGTTCAAAAA 57.927 34.783 0.00 0.00 37.11 1.94
504 520 3.744238 AAACAAGGGAAATGGAAACCG 57.256 42.857 0.00 0.00 0.00 4.44
517 533 2.739913 TGGAAACCGATAAGAAACTGCG 59.260 45.455 0.00 0.00 0.00 5.18
520 536 4.094442 GGAAACCGATAAGAAACTGCGAAT 59.906 41.667 0.00 0.00 0.00 3.34
521 537 4.600012 AACCGATAAGAAACTGCGAATG 57.400 40.909 0.00 0.00 0.00 2.67
522 538 2.936498 ACCGATAAGAAACTGCGAATGG 59.064 45.455 0.00 0.00 0.00 3.16
523 539 2.287915 CCGATAAGAAACTGCGAATGGG 59.712 50.000 0.00 0.00 0.00 4.00
524 540 2.286418 CGATAAGAAACTGCGAATGGGC 60.286 50.000 0.00 0.00 0.00 5.36
525 541 1.083489 TAAGAAACTGCGAATGGGCG 58.917 50.000 0.00 0.00 35.06 6.13
526 542 0.605319 AAGAAACTGCGAATGGGCGA 60.605 50.000 0.00 0.00 35.06 5.54
527 543 0.605319 AGAAACTGCGAATGGGCGAA 60.605 50.000 0.00 0.00 35.06 4.70
528 544 0.451783 GAAACTGCGAATGGGCGAAT 59.548 50.000 0.00 0.00 35.06 3.34
529 545 0.451783 AAACTGCGAATGGGCGAATC 59.548 50.000 0.00 0.00 35.06 2.52
530 546 0.676466 AACTGCGAATGGGCGAATCA 60.676 50.000 0.00 0.00 35.06 2.57
531 547 0.676466 ACTGCGAATGGGCGAATCAA 60.676 50.000 0.00 0.00 35.06 2.57
532 548 0.248215 CTGCGAATGGGCGAATCAAC 60.248 55.000 0.00 0.00 35.06 3.18
533 549 1.064134 GCGAATGGGCGAATCAACC 59.936 57.895 0.00 0.00 0.00 3.77
534 550 1.376609 GCGAATGGGCGAATCAACCT 61.377 55.000 0.00 0.00 0.00 3.50
535 551 0.378257 CGAATGGGCGAATCAACCTG 59.622 55.000 0.00 0.00 0.00 4.00
536 552 1.463674 GAATGGGCGAATCAACCTGT 58.536 50.000 0.00 0.00 0.00 4.00
537 553 1.133025 GAATGGGCGAATCAACCTGTG 59.867 52.381 0.00 0.00 0.00 3.66
538 554 0.680921 ATGGGCGAATCAACCTGTGG 60.681 55.000 0.00 0.00 0.00 4.17
539 555 1.303317 GGGCGAATCAACCTGTGGT 60.303 57.895 0.00 0.00 37.65 4.16
549 565 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
550 566 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
551 567 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
552 568 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
553 569 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
554 570 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
555 571 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
556 572 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
557 573 2.714250 TGGTTGAGTTGGTTAGGTGGAT 59.286 45.455 0.00 0.00 0.00 3.41
558 574 3.911260 TGGTTGAGTTGGTTAGGTGGATA 59.089 43.478 0.00 0.00 0.00 2.59
559 575 4.019681 TGGTTGAGTTGGTTAGGTGGATAG 60.020 45.833 0.00 0.00 0.00 2.08
560 576 4.019591 GGTTGAGTTGGTTAGGTGGATAGT 60.020 45.833 0.00 0.00 0.00 2.12
561 577 4.819105 TGAGTTGGTTAGGTGGATAGTG 57.181 45.455 0.00 0.00 0.00 2.74
562 578 3.517901 TGAGTTGGTTAGGTGGATAGTGG 59.482 47.826 0.00 0.00 0.00 4.00
563 579 3.518303 GAGTTGGTTAGGTGGATAGTGGT 59.482 47.826 0.00 0.00 0.00 4.16
564 580 4.691238 AGTTGGTTAGGTGGATAGTGGTA 58.309 43.478 0.00 0.00 0.00 3.25
565 581 5.286221 AGTTGGTTAGGTGGATAGTGGTAT 58.714 41.667 0.00 0.00 0.00 2.73
566 582 5.365895 AGTTGGTTAGGTGGATAGTGGTATC 59.634 44.000 0.00 0.00 35.19 2.24
575 591 3.865571 GGATAGTGGTATCCCTAACCCA 58.134 50.000 0.53 0.00 46.69 4.51
576 592 3.581770 GGATAGTGGTATCCCTAACCCAC 59.418 52.174 0.00 0.00 46.69 4.61
577 593 1.889174 AGTGGTATCCCTAACCCACC 58.111 55.000 4.15 0.00 46.84 4.61
578 594 1.081513 AGTGGTATCCCTAACCCACCA 59.918 52.381 4.15 0.00 46.84 4.17
579 595 1.489230 GTGGTATCCCTAACCCACCAG 59.511 57.143 0.00 0.00 41.20 4.00
580 596 1.137697 GGTATCCCTAACCCACCAGG 58.862 60.000 0.00 0.00 43.78 4.45
596 612 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
597 613 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
598 614 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
599 615 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
600 616 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
601 617 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
602 618 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
603 619 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
604 620 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
605 621 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
606 622 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
607 623 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
608 624 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
609 625 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
610 626 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
611 627 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
612 628 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
613 629 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
614 630 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
615 631 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
616 632 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
617 633 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
618 634 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
619 635 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
620 636 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
621 637 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
622 638 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
623 639 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
631 647 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
632 648 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
633 649 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
634 650 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
635 651 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
636 652 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
637 653 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
638 654 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
650 666 2.741930 CGATGCGCTTTCAGTGAGA 58.258 52.632 9.73 0.00 0.00 3.27
651 667 0.644331 CGATGCGCTTTCAGTGAGAG 59.356 55.000 9.73 6.31 0.00 3.20
652 668 1.005340 GATGCGCTTTCAGTGAGAGG 58.995 55.000 9.73 4.24 0.00 3.69
653 669 0.610174 ATGCGCTTTCAGTGAGAGGA 59.390 50.000 9.73 0.00 0.00 3.71
654 670 0.037882 TGCGCTTTCAGTGAGAGGAG 60.038 55.000 9.73 2.39 0.00 3.69
655 671 0.244994 GCGCTTTCAGTGAGAGGAGA 59.755 55.000 12.28 0.00 0.00 3.71
656 672 1.989430 CGCTTTCAGTGAGAGGAGAC 58.011 55.000 12.28 0.00 0.00 3.36
657 673 1.730772 CGCTTTCAGTGAGAGGAGACG 60.731 57.143 12.28 3.84 0.00 4.18
658 674 1.271102 GCTTTCAGTGAGAGGAGACGT 59.729 52.381 12.28 0.00 0.00 4.34
659 675 2.288518 GCTTTCAGTGAGAGGAGACGTT 60.289 50.000 12.28 0.00 0.00 3.99
660 676 3.570559 CTTTCAGTGAGAGGAGACGTTC 58.429 50.000 2.68 0.00 0.00 3.95
683 699 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
686 702 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
688 704 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
691 707 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
692 708 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
693 709 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
694 710 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
695 711 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
696 712 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
697 713 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
698 714 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
699 715 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
700 716 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
701 717 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
702 718 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
703 719 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
704 720 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
705 721 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
706 722 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
707 723 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
708 724 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
709 725 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
710 726 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
711 727 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
712 728 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
713 729 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
714 730 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
715 731 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
716 732 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
717 733 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
718 734 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
719 735 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
720 736 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
721 737 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
722 738 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
723 739 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
724 740 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
725 741 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
726 742 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
727 743 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
728 744 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
729 745 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
730 746 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
731 747 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
732 748 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
733 749 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
734 750 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
735 751 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
736 752 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
737 753 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
738 754 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
739 755 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
740 756 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
741 757 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
742 758 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
743 759 0.468214 CTCGGAGGTGCTCATAGGGA 60.468 60.000 0.00 0.00 31.08 4.20
744 760 0.188587 TCGGAGGTGCTCATAGGGAT 59.811 55.000 0.00 0.00 31.08 3.85
745 761 1.427753 TCGGAGGTGCTCATAGGGATA 59.572 52.381 0.00 0.00 31.08 2.59
746 762 1.821753 CGGAGGTGCTCATAGGGATAG 59.178 57.143 0.00 0.00 31.08 2.08
747 763 2.183679 GGAGGTGCTCATAGGGATAGG 58.816 57.143 0.00 0.00 31.08 2.57
748 764 2.183679 GAGGTGCTCATAGGGATAGGG 58.816 57.143 0.00 0.00 0.00 3.53
749 765 1.509961 AGGTGCTCATAGGGATAGGGT 59.490 52.381 0.00 0.00 0.00 4.34
750 766 1.625818 GGTGCTCATAGGGATAGGGTG 59.374 57.143 0.00 0.00 0.00 4.61
751 767 2.330216 GTGCTCATAGGGATAGGGTGT 58.670 52.381 0.00 0.00 0.00 4.16
752 768 2.037772 GTGCTCATAGGGATAGGGTGTG 59.962 54.545 0.00 0.00 0.00 3.82
753 769 1.002544 GCTCATAGGGATAGGGTGTGC 59.997 57.143 0.00 0.00 0.00 4.57
754 770 1.273606 CTCATAGGGATAGGGTGTGCG 59.726 57.143 0.00 0.00 0.00 5.34
755 771 1.048601 CATAGGGATAGGGTGTGCGT 58.951 55.000 0.00 0.00 0.00 5.24
756 772 1.048601 ATAGGGATAGGGTGTGCGTG 58.951 55.000 0.00 0.00 0.00 5.34
757 773 0.324923 TAGGGATAGGGTGTGCGTGT 60.325 55.000 0.00 0.00 0.00 4.49
758 774 1.449601 GGGATAGGGTGTGCGTGTG 60.450 63.158 0.00 0.00 0.00 3.82
759 775 1.295423 GGATAGGGTGTGCGTGTGT 59.705 57.895 0.00 0.00 0.00 3.72
760 776 1.019278 GGATAGGGTGTGCGTGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
761 777 1.635663 GATAGGGTGTGCGTGTGTGC 61.636 60.000 0.00 0.00 0.00 4.57
762 778 2.390306 ATAGGGTGTGCGTGTGTGCA 62.390 55.000 0.00 0.00 43.95 4.57
770 786 1.085893 TGCGTGTGTGCATTCATAGG 58.914 50.000 0.00 0.00 40.62 2.57
771 787 0.378257 GCGTGTGTGCATTCATAGGG 59.622 55.000 0.00 0.00 34.15 3.53
772 788 2.011548 GCGTGTGTGCATTCATAGGGA 61.012 52.381 0.00 0.00 34.15 4.20
773 789 2.564771 CGTGTGTGCATTCATAGGGAT 58.435 47.619 0.00 0.00 0.00 3.85
774 790 2.288729 CGTGTGTGCATTCATAGGGATG 59.711 50.000 0.00 0.00 0.00 3.51
775 791 3.544684 GTGTGTGCATTCATAGGGATGA 58.455 45.455 0.00 0.00 40.45 2.92
776 792 3.562973 GTGTGTGCATTCATAGGGATGAG 59.437 47.826 0.00 0.00 43.03 2.90
777 793 3.200605 TGTGTGCATTCATAGGGATGAGT 59.799 43.478 0.00 0.00 43.03 3.41
779 795 3.200605 TGTGCATTCATAGGGATGAGTGT 59.799 43.478 0.00 0.00 46.40 3.55
780 796 4.408596 TGTGCATTCATAGGGATGAGTGTA 59.591 41.667 0.00 5.11 46.40 2.90
781 797 5.072193 TGTGCATTCATAGGGATGAGTGTAT 59.928 40.000 0.00 0.00 46.40 2.29
782 798 5.410746 GTGCATTCATAGGGATGAGTGTATG 59.589 44.000 0.00 3.63 46.40 2.39
783 799 4.394300 GCATTCATAGGGATGAGTGTATGC 59.606 45.833 0.00 8.64 46.40 3.14
784 800 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
785 801 3.230976 TCATAGGGATGAGTGTATGCGT 58.769 45.455 0.00 0.00 37.15 5.24
786 802 3.005791 TCATAGGGATGAGTGTATGCGTG 59.994 47.826 0.00 0.00 37.15 5.34
787 803 1.195115 AGGGATGAGTGTATGCGTGT 58.805 50.000 0.00 0.00 0.00 4.49
788 804 1.134699 AGGGATGAGTGTATGCGTGTG 60.135 52.381 0.00 0.00 0.00 3.82
789 805 1.405526 GGGATGAGTGTATGCGTGTGT 60.406 52.381 0.00 0.00 0.00 3.72
790 806 2.159156 GGGATGAGTGTATGCGTGTGTA 60.159 50.000 0.00 0.00 0.00 2.90
791 807 3.492656 GGGATGAGTGTATGCGTGTGTAT 60.493 47.826 0.00 0.00 0.00 2.29
792 808 4.261867 GGGATGAGTGTATGCGTGTGTATA 60.262 45.833 0.00 0.00 0.00 1.47
793 809 5.470368 GGATGAGTGTATGCGTGTGTATAT 58.530 41.667 0.00 0.00 0.00 0.86
794 810 5.346011 GGATGAGTGTATGCGTGTGTATATG 59.654 44.000 0.00 0.00 0.00 1.78
795 811 5.508200 TGAGTGTATGCGTGTGTATATGA 57.492 39.130 0.00 0.00 0.00 2.15
796 812 5.519722 TGAGTGTATGCGTGTGTATATGAG 58.480 41.667 0.00 0.00 0.00 2.90
797 813 4.299155 AGTGTATGCGTGTGTATATGAGC 58.701 43.478 0.00 0.00 0.00 4.26
798 814 3.119628 GTGTATGCGTGTGTATATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
799 815 1.139989 ATGCGTGTGTATATGAGCGC 58.860 50.000 0.00 0.00 44.29 5.92
800 816 0.102300 TGCGTGTGTATATGAGCGCT 59.898 50.000 11.27 11.27 44.34 5.92
801 817 1.209128 GCGTGTGTATATGAGCGCTT 58.791 50.000 13.26 0.00 41.37 4.68
802 818 1.071239 GCGTGTGTATATGAGCGCTTG 60.071 52.381 13.26 0.00 41.37 4.01
803 819 2.193447 CGTGTGTATATGAGCGCTTGT 58.807 47.619 13.26 5.98 0.00 3.16
804 820 2.034591 CGTGTGTATATGAGCGCTTGTG 60.035 50.000 13.26 0.00 0.00 3.33
805 821 2.930040 GTGTGTATATGAGCGCTTGTGT 59.070 45.455 13.26 4.27 0.00 3.72
806 822 3.370978 GTGTGTATATGAGCGCTTGTGTT 59.629 43.478 13.26 0.00 0.00 3.32
807 823 4.000325 TGTGTATATGAGCGCTTGTGTTT 59.000 39.130 13.26 0.00 0.00 2.83
808 824 4.142924 TGTGTATATGAGCGCTTGTGTTTG 60.143 41.667 13.26 0.00 0.00 2.93
809 825 4.000325 TGTATATGAGCGCTTGTGTTTGT 59.000 39.130 13.26 0.00 0.00 2.83
810 826 5.062934 GTGTATATGAGCGCTTGTGTTTGTA 59.937 40.000 13.26 0.00 0.00 2.41
811 827 2.969443 ATGAGCGCTTGTGTTTGTAC 57.031 45.000 13.26 0.00 0.00 2.90
812 828 1.948104 TGAGCGCTTGTGTTTGTACT 58.052 45.000 13.26 0.00 0.00 2.73
813 829 1.597195 TGAGCGCTTGTGTTTGTACTG 59.403 47.619 13.26 0.00 0.00 2.74
814 830 1.864711 GAGCGCTTGTGTTTGTACTGA 59.135 47.619 13.26 0.00 0.00 3.41
815 831 2.480419 GAGCGCTTGTGTTTGTACTGAT 59.520 45.455 13.26 0.00 0.00 2.90
816 832 2.224079 AGCGCTTGTGTTTGTACTGATG 59.776 45.455 2.64 0.00 0.00 3.07
817 833 2.574322 CGCTTGTGTTTGTACTGATGC 58.426 47.619 0.00 0.00 0.00 3.91
818 834 2.224079 CGCTTGTGTTTGTACTGATGCT 59.776 45.455 0.00 0.00 0.00 3.79
819 835 3.665323 CGCTTGTGTTTGTACTGATGCTC 60.665 47.826 0.00 0.00 0.00 4.26
820 836 3.250762 GCTTGTGTTTGTACTGATGCTCA 59.749 43.478 0.00 0.00 0.00 4.26
821 837 4.261155 GCTTGTGTTTGTACTGATGCTCAA 60.261 41.667 0.00 0.00 0.00 3.02
822 838 5.733091 GCTTGTGTTTGTACTGATGCTCAAA 60.733 40.000 0.00 0.00 0.00 2.69
823 839 5.826601 TGTGTTTGTACTGATGCTCAAAA 57.173 34.783 0.00 0.00 32.81 2.44
824 840 6.201226 TGTGTTTGTACTGATGCTCAAAAA 57.799 33.333 0.00 0.00 32.81 1.94
844 860 0.958822 AAAACTGCGAATGGTGGACC 59.041 50.000 0.00 0.00 0.00 4.46
885 901 0.321741 TATTGCGCCAAACTTCCCGA 60.322 50.000 4.18 0.00 0.00 5.14
950 966 6.627953 GCTTGGTACATTCATGCAAATAAGGT 60.628 38.462 0.00 0.00 39.30 3.50
951 967 6.206395 TGGTACATTCATGCAAATAAGGTG 57.794 37.500 0.00 0.00 0.00 4.00
995 1012 4.276183 TCAAGATACACAGAGATAGGCGAC 59.724 45.833 0.00 0.00 0.00 5.19
1032 1049 1.202348 GGTGTTGCTTCCATACTTGCC 59.798 52.381 0.00 0.00 0.00 4.52
1038 1055 1.376609 CTTCCATACTTGCCGTGGCC 61.377 60.000 8.69 0.00 41.09 5.36
1054 1071 2.846532 CCCTGGTCCTTGTTGCCT 59.153 61.111 0.00 0.00 0.00 4.75
1056 1073 0.469892 CCCTGGTCCTTGTTGCCTTT 60.470 55.000 0.00 0.00 0.00 3.11
1091 1834 6.692232 CGCAGGTAATATGCTTACTTAGAC 57.308 41.667 0.00 0.00 41.61 2.59
1139 1890 9.566530 CATATTTTGTTGGAATCGTTCATACAA 57.433 29.630 10.09 10.09 34.70 2.41
1196 1947 6.753279 TGCATGAAAGAGTGCATTAATTAAGC 59.247 34.615 3.94 8.07 45.60 3.09
1197 1948 6.753279 GCATGAAAGAGTGCATTAATTAAGCA 59.247 34.615 14.44 14.44 40.94 3.91
1198 1949 7.437267 GCATGAAAGAGTGCATTAATTAAGCAT 59.563 33.333 18.76 11.59 40.78 3.79
1238 1998 1.356624 GGCGGTGATTACATGCTGC 59.643 57.895 0.00 0.00 33.13 5.25
1241 2001 1.085893 CGGTGATTACATGCTGCACA 58.914 50.000 3.57 0.00 0.00 4.57
1255 2016 6.151648 ACATGCTGCACATAAGTAACAAATCT 59.848 34.615 3.57 0.00 36.64 2.40
1384 4809 0.039618 ACCAAACCAAGGGCATCGAT 59.960 50.000 0.00 0.00 0.00 3.59
1621 5046 1.841556 GACCATCCTCCCGGCCATA 60.842 63.158 2.24 0.00 0.00 2.74
1634 5059 3.697045 CCCGGCCATAAAGAACATACAAA 59.303 43.478 2.24 0.00 0.00 2.83
1685 5110 0.716108 CATCAAGGTGTCGACTTCGC 59.284 55.000 17.92 4.42 39.60 4.70
1705 5130 2.025418 GCGGTTCGACGTGGTCAAT 61.025 57.895 0.00 0.00 35.98 2.57
1951 5382 2.805546 GACTCCATCTACGCCGCA 59.194 61.111 0.00 0.00 0.00 5.69
2223 5654 2.684881 CGGCCTACTCCGTTACTTTCTA 59.315 50.000 0.00 0.00 44.18 2.10
2234 5722 8.357402 ACTCCGTTACTTTCTAAATGCAAAATT 58.643 29.630 0.00 0.00 0.00 1.82
2281 5769 7.870954 TCGTCTGTCTGTGTTATGTTCTAATTT 59.129 33.333 0.00 0.00 0.00 1.82
2315 5803 8.463930 TCTCCAATAAAACAAGTCACAGAAAT 57.536 30.769 0.00 0.00 0.00 2.17
2322 5810 9.883142 ATAAAACAAGTCACAGAAATGGAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
2323 5811 7.832503 AAACAAGTCACAGAAATGGAAAAAG 57.167 32.000 0.00 0.00 0.00 2.27
2325 5813 5.127682 ACAAGTCACAGAAATGGAAAAAGCT 59.872 36.000 0.00 0.00 0.00 3.74
2326 5814 5.192327 AGTCACAGAAATGGAAAAAGCTG 57.808 39.130 0.00 0.00 0.00 4.24
2327 5815 4.889409 AGTCACAGAAATGGAAAAAGCTGA 59.111 37.500 0.00 0.00 0.00 4.26
2328 5816 5.009410 AGTCACAGAAATGGAAAAAGCTGAG 59.991 40.000 0.00 0.00 0.00 3.35
2329 5817 4.889409 TCACAGAAATGGAAAAAGCTGAGT 59.111 37.500 0.00 0.00 0.00 3.41
2330 5818 6.017109 GTCACAGAAATGGAAAAAGCTGAGTA 60.017 38.462 0.00 0.00 0.00 2.59
2331 5819 6.545666 TCACAGAAATGGAAAAAGCTGAGTAA 59.454 34.615 0.00 0.00 0.00 2.24
2332 5820 7.068103 TCACAGAAATGGAAAAAGCTGAGTAAA 59.932 33.333 0.00 0.00 0.00 2.01
2333 5821 7.869429 CACAGAAATGGAAAAAGCTGAGTAAAT 59.131 33.333 0.00 0.00 0.00 1.40
2334 5822 8.424133 ACAGAAATGGAAAAAGCTGAGTAAATT 58.576 29.630 0.00 0.00 0.00 1.82
2335 5823 8.706035 CAGAAATGGAAAAAGCTGAGTAAATTG 58.294 33.333 0.00 0.00 0.00 2.32
2336 5824 7.386025 AGAAATGGAAAAAGCTGAGTAAATTGC 59.614 33.333 0.00 0.00 0.00 3.56
2337 5825 4.881920 TGGAAAAAGCTGAGTAAATTGCC 58.118 39.130 0.00 0.00 0.00 4.52
2338 5826 4.245660 GGAAAAAGCTGAGTAAATTGCCC 58.754 43.478 0.00 0.00 0.00 5.36
2339 5827 4.021104 GGAAAAAGCTGAGTAAATTGCCCT 60.021 41.667 0.00 0.00 0.00 5.19
2340 5828 5.511373 GGAAAAAGCTGAGTAAATTGCCCTT 60.511 40.000 0.00 0.00 0.00 3.95
2341 5829 5.551305 AAAAGCTGAGTAAATTGCCCTTT 57.449 34.783 0.00 0.00 0.00 3.11
2342 5830 4.525912 AAGCTGAGTAAATTGCCCTTTG 57.474 40.909 0.00 0.00 0.00 2.77
2343 5831 3.766545 AGCTGAGTAAATTGCCCTTTGA 58.233 40.909 0.00 0.00 0.00 2.69
2344 5832 3.760684 AGCTGAGTAAATTGCCCTTTGAG 59.239 43.478 0.00 0.00 0.00 3.02
2345 5833 3.758554 GCTGAGTAAATTGCCCTTTGAGA 59.241 43.478 0.00 0.00 0.00 3.27
2346 5834 4.142513 GCTGAGTAAATTGCCCTTTGAGAG 60.143 45.833 0.00 0.00 0.00 3.20
2347 5835 5.241403 TGAGTAAATTGCCCTTTGAGAGA 57.759 39.130 0.00 0.00 0.00 3.10
2348 5836 5.630121 TGAGTAAATTGCCCTTTGAGAGAA 58.370 37.500 0.00 0.00 0.00 2.87
2349 5837 6.068010 TGAGTAAATTGCCCTTTGAGAGAAA 58.932 36.000 0.00 0.00 0.00 2.52
2350 5838 6.549364 TGAGTAAATTGCCCTTTGAGAGAAAA 59.451 34.615 0.00 0.00 0.00 2.29
2351 5839 7.069331 TGAGTAAATTGCCCTTTGAGAGAAAAA 59.931 33.333 0.00 0.00 0.00 1.94
2352 5840 7.436933 AGTAAATTGCCCTTTGAGAGAAAAAG 58.563 34.615 0.00 0.00 34.94 2.27
2353 5841 3.733443 TTGCCCTTTGAGAGAAAAAGC 57.267 42.857 0.00 0.00 34.03 3.51
2354 5842 2.949447 TGCCCTTTGAGAGAAAAAGCT 58.051 42.857 0.00 0.00 34.03 3.74
2364 5852 9.392021 CTTTGAGAGAAAAAGCTGAGTAAATTC 57.608 33.333 0.00 0.00 0.00 2.17
2369 5857 6.974965 AGAAAAAGCTGAGTAAATTCCACTG 58.025 36.000 0.00 0.00 0.00 3.66
2373 5861 6.715347 AAGCTGAGTAAATTCCACTGTTTT 57.285 33.333 0.00 0.00 0.00 2.43
2374 5862 6.715347 AGCTGAGTAAATTCCACTGTTTTT 57.285 33.333 0.00 0.00 0.00 1.94
2377 5865 8.860088 AGCTGAGTAAATTCCACTGTTTTTAAT 58.140 29.630 0.00 0.00 0.00 1.40
2406 5894 9.203421 CAAATTTTTACCCTCAATAAGGTGAAC 57.797 33.333 0.00 0.00 44.56 3.18
2445 5969 3.188048 CCCATCTATTCATTTGCTCTCGC 59.812 47.826 0.00 0.00 0.00 5.03
2455 5979 2.532186 TGCTCTCGCACAATGTGAC 58.468 52.632 18.66 7.61 42.25 3.67
2456 5980 0.249826 TGCTCTCGCACAATGTGACA 60.250 50.000 18.66 0.83 42.25 3.58
2457 5981 0.164647 GCTCTCGCACAATGTGACAC 59.835 55.000 18.66 0.00 35.23 3.67
2458 5982 1.788258 CTCTCGCACAATGTGACACT 58.212 50.000 18.66 0.00 35.23 3.55
2459 5983 2.926586 GCTCTCGCACAATGTGACACTA 60.927 50.000 18.66 0.00 35.23 2.74
2461 5985 1.386748 CTCGCACAATGTGACACTACG 59.613 52.381 18.66 9.87 35.23 3.51
2481 6526 0.739561 GGCCTACTAGAGTGACACGG 59.260 60.000 0.00 0.00 0.00 4.94
2546 6591 9.097946 ACATTAGGTGATGAGATCAATGAGATA 57.902 33.333 0.00 0.00 41.69 1.98
2641 6690 5.836347 ACAATCTCAAAAAGTTTCAGCTCC 58.164 37.500 0.00 0.00 0.00 4.70
2642 6691 5.360714 ACAATCTCAAAAAGTTTCAGCTCCA 59.639 36.000 0.00 0.00 0.00 3.86
2647 6696 6.322201 TCTCAAAAAGTTTCAGCTCCAAATCT 59.678 34.615 0.00 0.00 0.00 2.40
2648 6697 6.275335 TCAAAAAGTTTCAGCTCCAAATCTG 58.725 36.000 0.00 0.00 0.00 2.90
2656 6705 3.582647 TCAGCTCCAAATCTGACCTACAA 59.417 43.478 0.00 0.00 34.69 2.41
2657 6706 4.041567 TCAGCTCCAAATCTGACCTACAAA 59.958 41.667 0.00 0.00 34.69 2.83
2658 6707 4.946157 CAGCTCCAAATCTGACCTACAAAT 59.054 41.667 0.00 0.00 32.26 2.32
2660 6709 6.259608 CAGCTCCAAATCTGACCTACAAATAG 59.740 42.308 0.00 0.00 32.26 1.73
2662 6711 6.823689 GCTCCAAATCTGACCTACAAATAGAA 59.176 38.462 0.00 0.00 0.00 2.10
2663 6712 7.011857 GCTCCAAATCTGACCTACAAATAGAAG 59.988 40.741 0.00 0.00 0.00 2.85
2664 6713 7.338710 TCCAAATCTGACCTACAAATAGAAGG 58.661 38.462 0.00 0.00 36.42 3.46
2666 6715 7.829211 CCAAATCTGACCTACAAATAGAAGGAA 59.171 37.037 0.00 0.00 34.34 3.36
2701 6750 3.402110 TCAGATGCGAACAGTGTCAAAT 58.598 40.909 0.00 0.00 0.00 2.32
2703 6752 4.994217 TCAGATGCGAACAGTGTCAAATTA 59.006 37.500 0.00 0.00 0.00 1.40
2704 6753 5.643348 TCAGATGCGAACAGTGTCAAATTAT 59.357 36.000 0.00 0.00 0.00 1.28
2711 6760 7.748683 TGCGAACAGTGTCAAATTATTATTCAC 59.251 33.333 0.00 0.00 0.00 3.18
2736 6785 5.125900 CCAAAGATGCCACTATTCACATTCA 59.874 40.000 0.00 0.00 0.00 2.57
2741 6790 7.844009 AGATGCCACTATTCACATTCAAATTT 58.156 30.769 0.00 0.00 0.00 1.82
2778 6827 7.210718 TCTCTAACTGTACATCGAGTTTTGA 57.789 36.000 0.00 0.00 34.28 2.69
2783 6832 4.237724 CTGTACATCGAGTTTTGAGCTGA 58.762 43.478 0.00 0.00 0.00 4.26
2810 6859 2.381911 TCGGAGTTGTAGACATACCCC 58.618 52.381 0.00 0.00 0.00 4.95
2815 6864 0.177141 TTGTAGACATACCCCGCAGC 59.823 55.000 0.00 0.00 0.00 5.25
2963 7013 3.437049 GTGCACATTCCTCTAACTTGTCC 59.563 47.826 13.17 0.00 0.00 4.02
2972 7022 4.407621 TCCTCTAACTTGTCCAACAACTCA 59.592 41.667 0.00 0.00 33.96 3.41
2982 7032 4.644234 TGTCCAACAACTCAATCACAATGT 59.356 37.500 0.00 0.00 0.00 2.71
2984 7034 6.319911 TGTCCAACAACTCAATCACAATGTTA 59.680 34.615 0.00 0.00 30.48 2.41
3003 7053 9.282247 CAATGTTACAATTCTGAACTAGCATTC 57.718 33.333 0.00 0.00 0.00 2.67
3005 7055 7.806690 TGTTACAATTCTGAACTAGCATTCAC 58.193 34.615 0.00 0.00 34.84 3.18
3011 7061 0.392461 GAACTAGCATTCACGGCCCA 60.392 55.000 0.00 0.00 0.00 5.36
3020 7070 0.321298 TTCACGGCCCAAGTCTAAGC 60.321 55.000 0.00 0.00 0.00 3.09
3030 7080 3.554337 CCCAAGTCTAAGCTACGTTGTGT 60.554 47.826 0.00 0.00 0.00 3.72
3034 7084 5.640189 AGTCTAAGCTACGTTGTGTACAT 57.360 39.130 0.00 0.00 0.00 2.29
3036 7086 4.031426 GTCTAAGCTACGTTGTGTACATGC 59.969 45.833 0.00 0.00 0.00 4.06
3044 7094 3.813166 ACGTTGTGTACATGCTTAAGCTT 59.187 39.130 26.90 18.70 42.66 3.74
3065 7115 4.029809 GCCCAGCAACCCGGTAGT 62.030 66.667 0.00 0.00 0.00 2.73
3067 7117 2.746277 CCAGCAACCCGGTAGTGC 60.746 66.667 12.09 12.09 0.00 4.40
3144 7237 5.600898 ACAACTAATTTTTAACTGCCCCTGT 59.399 36.000 0.00 0.00 0.00 4.00
3179 7272 6.201425 GTCTGAACGTAACATCCAGTTGTTAA 59.799 38.462 0.00 0.00 42.15 2.01
3180 7273 6.422701 TCTGAACGTAACATCCAGTTGTTAAG 59.577 38.462 10.86 10.86 42.15 1.85
3181 7274 5.049954 TGAACGTAACATCCAGTTGTTAAGC 60.050 40.000 11.83 2.19 42.15 3.09
3183 7276 4.000988 CGTAACATCCAGTTGTTAAGCCT 58.999 43.478 3.51 0.00 42.15 4.58
3184 7277 5.172934 CGTAACATCCAGTTGTTAAGCCTA 58.827 41.667 3.51 0.00 42.15 3.93
3185 7278 5.640357 CGTAACATCCAGTTGTTAAGCCTAA 59.360 40.000 3.51 0.00 42.15 2.69
3186 7279 6.148150 CGTAACATCCAGTTGTTAAGCCTAAA 59.852 38.462 3.51 0.00 42.15 1.85
3187 7280 6.969993 AACATCCAGTTGTTAAGCCTAAAA 57.030 33.333 0.00 0.00 39.49 1.52
3188 7281 6.969993 ACATCCAGTTGTTAAGCCTAAAAA 57.030 33.333 0.00 0.00 0.00 1.94
3189 7282 6.745116 ACATCCAGTTGTTAAGCCTAAAAAC 58.255 36.000 0.46 0.46 36.02 2.43
3190 7283 5.777850 TCCAGTTGTTAAGCCTAAAAACC 57.222 39.130 4.76 0.00 36.31 3.27
3191 7284 4.276431 TCCAGTTGTTAAGCCTAAAAACCG 59.724 41.667 4.76 0.00 36.31 4.44
3192 7285 4.542735 CAGTTGTTAAGCCTAAAAACCGG 58.457 43.478 0.00 0.00 36.31 5.28
3193 7286 3.005050 AGTTGTTAAGCCTAAAAACCGGC 59.995 43.478 0.00 0.00 36.31 6.13
3194 7287 2.584236 TGTTAAGCCTAAAAACCGGCA 58.416 42.857 0.00 0.00 0.00 5.69
3195 7288 2.957006 TGTTAAGCCTAAAAACCGGCAA 59.043 40.909 0.00 0.00 0.00 4.52
3196 7289 3.383825 TGTTAAGCCTAAAAACCGGCAAA 59.616 39.130 0.00 0.00 0.00 3.68
3197 7290 4.142004 TGTTAAGCCTAAAAACCGGCAAAA 60.142 37.500 0.00 0.00 0.00 2.44
3198 7291 2.519377 AGCCTAAAAACCGGCAAAAC 57.481 45.000 0.00 0.00 0.00 2.43
3199 7292 1.133407 GCCTAAAAACCGGCAAAACG 58.867 50.000 0.00 0.00 0.00 3.60
3209 7302 1.895051 CGGCAAAACGGAATGTGATC 58.105 50.000 0.00 0.00 0.00 2.92
3210 7303 1.468520 CGGCAAAACGGAATGTGATCT 59.531 47.619 0.00 0.00 0.00 2.75
3211 7304 2.728846 CGGCAAAACGGAATGTGATCTG 60.729 50.000 0.00 0.00 0.00 2.90
3212 7305 2.253603 GCAAAACGGAATGTGATCTGC 58.746 47.619 0.00 0.00 0.00 4.26
3213 7306 2.508867 CAAAACGGAATGTGATCTGCG 58.491 47.619 0.00 0.00 0.00 5.18
3214 7307 1.086696 AAACGGAATGTGATCTGCGG 58.913 50.000 0.00 0.00 0.00 5.69
3215 7308 0.036388 AACGGAATGTGATCTGCGGT 60.036 50.000 0.00 0.00 0.00 5.68
3216 7309 0.036388 ACGGAATGTGATCTGCGGTT 60.036 50.000 0.00 0.00 0.00 4.44
3217 7310 0.374758 CGGAATGTGATCTGCGGTTG 59.625 55.000 0.00 0.00 0.00 3.77
3218 7311 1.453155 GGAATGTGATCTGCGGTTGT 58.547 50.000 0.00 0.00 0.00 3.32
3219 7312 2.627945 GGAATGTGATCTGCGGTTGTA 58.372 47.619 0.00 0.00 0.00 2.41
3220 7313 2.351726 GGAATGTGATCTGCGGTTGTAC 59.648 50.000 0.00 0.00 0.00 2.90
3221 7314 1.640428 ATGTGATCTGCGGTTGTACG 58.360 50.000 0.00 0.00 0.00 3.67
3222 7315 0.315886 TGTGATCTGCGGTTGTACGT 59.684 50.000 0.00 0.00 35.98 3.57
3223 7316 0.713883 GTGATCTGCGGTTGTACGTG 59.286 55.000 0.00 0.00 35.98 4.49
3224 7317 0.315886 TGATCTGCGGTTGTACGTGT 59.684 50.000 0.00 0.00 35.98 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.802039 TCTTATAACCCACACTTTACTTTTCAT 57.198 29.630 0.00 0.00 0.00 2.57
10 11 5.888982 ATCGGATCTTATAACCCACACTT 57.111 39.130 0.00 0.00 0.00 3.16
11 12 5.888982 AATCGGATCTTATAACCCACACT 57.111 39.130 0.00 0.00 0.00 3.55
14 15 5.634020 CGAGAAATCGGATCTTATAACCCAC 59.366 44.000 0.00 0.00 0.00 4.61
22 23 6.532657 GTGGTTTTACGAGAAATCGGATCTTA 59.467 38.462 2.46 0.00 37.45 2.10
30 31 6.202188 TGAAGTCAGTGGTTTTACGAGAAATC 59.798 38.462 0.00 0.00 0.00 2.17
40 41 2.413310 ACGGTGAAGTCAGTGGTTTT 57.587 45.000 0.00 0.00 0.00 2.43
57 58 3.500982 TCACGGACGGAACTAATTTACG 58.499 45.455 0.00 0.00 0.00 3.18
66 67 0.935196 GGCATTATCACGGACGGAAC 59.065 55.000 0.00 0.00 0.00 3.62
75 76 1.890876 TATGGCACGGGCATTATCAC 58.109 50.000 13.89 0.00 46.61 3.06
77 78 1.196808 CGTTATGGCACGGGCATTATC 59.803 52.381 13.89 0.35 46.61 1.75
82 83 1.448189 GTACGTTATGGCACGGGCA 60.448 57.895 13.89 7.37 44.82 5.36
93 94 2.387185 CACTTGTCTGTGCGTACGTTA 58.613 47.619 17.90 3.55 0.00 3.18
96 97 1.886861 GCCACTTGTCTGTGCGTACG 61.887 60.000 11.84 11.84 36.68 3.67
110 111 4.094476 TCCTAGCTAAGTTACTTGCCACT 58.906 43.478 8.00 2.58 0.00 4.00
114 115 4.434520 CCACTCCTAGCTAAGTTACTTGC 58.565 47.826 8.00 9.28 0.00 4.01
123 130 2.111384 CTTCCAGCCACTCCTAGCTAA 58.889 52.381 0.00 0.00 37.18 3.09
131 138 1.000938 CTTTGTTGCTTCCAGCCACTC 60.001 52.381 2.08 0.00 41.51 3.51
338 354 1.071471 CCATCCAGTCCGGCCATAC 59.929 63.158 2.24 0.00 33.14 2.39
401 417 2.169561 GGCCTGTCCCTTTTCAAACAAA 59.830 45.455 0.00 0.00 0.00 2.83
404 420 1.408969 TGGCCTGTCCCTTTTCAAAC 58.591 50.000 3.32 0.00 0.00 2.93
445 461 4.833380 TCGGTTTCCATTTTCCACCAATTA 59.167 37.500 0.00 0.00 0.00 1.40
482 498 4.162509 TCGGTTTCCATTTCCCTTGTTTTT 59.837 37.500 0.00 0.00 0.00 1.94
483 499 3.707102 TCGGTTTCCATTTCCCTTGTTTT 59.293 39.130 0.00 0.00 0.00 2.43
484 500 3.301274 TCGGTTTCCATTTCCCTTGTTT 58.699 40.909 0.00 0.00 0.00 2.83
485 501 2.952116 TCGGTTTCCATTTCCCTTGTT 58.048 42.857 0.00 0.00 0.00 2.83
486 502 2.668144 TCGGTTTCCATTTCCCTTGT 57.332 45.000 0.00 0.00 0.00 3.16
487 503 4.947388 TCTTATCGGTTTCCATTTCCCTTG 59.053 41.667 0.00 0.00 0.00 3.61
488 504 5.187621 TCTTATCGGTTTCCATTTCCCTT 57.812 39.130 0.00 0.00 0.00 3.95
489 505 4.855298 TCTTATCGGTTTCCATTTCCCT 57.145 40.909 0.00 0.00 0.00 4.20
490 506 5.417894 AGTTTCTTATCGGTTTCCATTTCCC 59.582 40.000 0.00 0.00 0.00 3.97
491 507 6.322491 CAGTTTCTTATCGGTTTCCATTTCC 58.678 40.000 0.00 0.00 0.00 3.13
492 508 5.800438 GCAGTTTCTTATCGGTTTCCATTTC 59.200 40.000 0.00 0.00 0.00 2.17
493 509 5.619086 CGCAGTTTCTTATCGGTTTCCATTT 60.619 40.000 0.00 0.00 0.00 2.32
494 510 4.142687 CGCAGTTTCTTATCGGTTTCCATT 60.143 41.667 0.00 0.00 0.00 3.16
495 511 3.374058 CGCAGTTTCTTATCGGTTTCCAT 59.626 43.478 0.00 0.00 0.00 3.41
496 512 2.739913 CGCAGTTTCTTATCGGTTTCCA 59.260 45.455 0.00 0.00 0.00 3.53
497 513 2.997986 TCGCAGTTTCTTATCGGTTTCC 59.002 45.455 0.00 0.00 0.00 3.13
504 520 2.286418 CGCCCATTCGCAGTTTCTTATC 60.286 50.000 0.00 0.00 0.00 1.75
517 533 1.133025 CACAGGTTGATTCGCCCATTC 59.867 52.381 0.00 0.00 0.00 2.67
520 536 1.303236 CCACAGGTTGATTCGCCCA 60.303 57.895 0.00 0.00 0.00 5.36
521 537 0.893727 AACCACAGGTTGATTCGCCC 60.894 55.000 0.00 0.00 45.07 6.13
522 538 2.641197 AACCACAGGTTGATTCGCC 58.359 52.632 0.00 0.00 45.07 5.54
531 547 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
532 548 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
533 549 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
534 550 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
535 551 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
536 552 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
537 553 2.943036 TCCACCTAACCAACTCAACC 57.057 50.000 0.00 0.00 0.00 3.77
538 554 4.935808 CACTATCCACCTAACCAACTCAAC 59.064 45.833 0.00 0.00 0.00 3.18
539 555 4.019681 CCACTATCCACCTAACCAACTCAA 60.020 45.833 0.00 0.00 0.00 3.02
540 556 3.517901 CCACTATCCACCTAACCAACTCA 59.482 47.826 0.00 0.00 0.00 3.41
541 557 3.518303 ACCACTATCCACCTAACCAACTC 59.482 47.826 0.00 0.00 0.00 3.01
542 558 3.527937 ACCACTATCCACCTAACCAACT 58.472 45.455 0.00 0.00 0.00 3.16
543 559 3.994931 ACCACTATCCACCTAACCAAC 57.005 47.619 0.00 0.00 0.00 3.77
544 560 4.657039 GGATACCACTATCCACCTAACCAA 59.343 45.833 2.40 0.00 45.82 3.67
545 561 4.228824 GGATACCACTATCCACCTAACCA 58.771 47.826 2.40 0.00 45.82 3.67
546 562 4.886496 GGATACCACTATCCACCTAACC 57.114 50.000 2.40 0.00 45.82 2.85
573 589 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
578 594 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
579 595 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
580 596 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
581 597 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
582 598 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
583 599 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
584 600 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
585 601 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
586 602 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
587 603 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
588 604 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
589 605 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
590 606 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
591 607 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
592 608 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
593 609 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
594 610 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
595 611 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
596 612 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
597 613 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
607 623 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
608 624 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
609 625 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
610 626 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
611 627 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
612 628 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
613 629 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
614 630 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
615 631 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
616 632 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
617 633 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
618 634 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
619 635 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
620 636 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
621 637 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
632 648 0.644331 CTCTCACTGAAAGCGCATCG 59.356 55.000 11.47 6.82 37.60 3.84
633 649 1.005340 CCTCTCACTGAAAGCGCATC 58.995 55.000 11.47 8.39 37.60 3.91
634 650 0.610174 TCCTCTCACTGAAAGCGCAT 59.390 50.000 11.47 0.00 37.60 4.73
635 651 0.037882 CTCCTCTCACTGAAAGCGCA 60.038 55.000 11.47 0.00 37.60 6.09
636 652 0.244994 TCTCCTCTCACTGAAAGCGC 59.755 55.000 0.00 0.00 37.60 5.92
637 653 1.730772 CGTCTCCTCTCACTGAAAGCG 60.731 57.143 0.00 0.00 37.60 4.68
638 654 1.271102 ACGTCTCCTCTCACTGAAAGC 59.729 52.381 0.00 0.00 37.60 3.51
639 655 3.570559 GAACGTCTCCTCTCACTGAAAG 58.429 50.000 0.00 0.00 42.29 2.62
640 656 2.296471 GGAACGTCTCCTCTCACTGAAA 59.704 50.000 8.87 0.00 41.61 2.69
641 657 1.887198 GGAACGTCTCCTCTCACTGAA 59.113 52.381 8.87 0.00 41.61 3.02
642 658 1.535833 GGAACGTCTCCTCTCACTGA 58.464 55.000 8.87 0.00 41.61 3.41
643 659 0.528470 GGGAACGTCTCCTCTCACTG 59.472 60.000 13.94 0.00 44.68 3.66
644 660 2.964343 GGGAACGTCTCCTCTCACT 58.036 57.895 13.94 0.00 44.68 3.41
665 681 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
666 682 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
679 695 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
680 696 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
681 697 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
682 698 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
683 699 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
684 700 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
685 701 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
686 702 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
687 703 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
688 704 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
689 705 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
690 706 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
691 707 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
692 708 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
693 709 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
694 710 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
695 711 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
696 712 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
697 713 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
698 714 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
699 715 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
700 716 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
701 717 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
702 718 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
703 719 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
704 720 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
705 721 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
706 722 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
707 723 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
708 724 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
709 725 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
710 726 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
711 727 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
712 728 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
713 729 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
714 730 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
715 731 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
716 732 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
717 733 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
718 734 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
719 735 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
720 736 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
721 737 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
722 738 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
723 739 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
724 740 0.468214 TCCCTATGAGCACCTCCGAG 60.468 60.000 0.00 0.00 0.00 4.63
725 741 0.188587 ATCCCTATGAGCACCTCCGA 59.811 55.000 0.00 0.00 0.00 4.55
726 742 1.821753 CTATCCCTATGAGCACCTCCG 59.178 57.143 0.00 0.00 0.00 4.63
727 743 2.183679 CCTATCCCTATGAGCACCTCC 58.816 57.143 0.00 0.00 0.00 4.30
728 744 2.183679 CCCTATCCCTATGAGCACCTC 58.816 57.143 0.00 0.00 0.00 3.85
729 745 1.509961 ACCCTATCCCTATGAGCACCT 59.490 52.381 0.00 0.00 0.00 4.00
730 746 1.625818 CACCCTATCCCTATGAGCACC 59.374 57.143 0.00 0.00 0.00 5.01
731 747 2.037772 CACACCCTATCCCTATGAGCAC 59.962 54.545 0.00 0.00 0.00 4.40
732 748 2.329267 CACACCCTATCCCTATGAGCA 58.671 52.381 0.00 0.00 0.00 4.26
733 749 1.002544 GCACACCCTATCCCTATGAGC 59.997 57.143 0.00 0.00 0.00 4.26
734 750 1.273606 CGCACACCCTATCCCTATGAG 59.726 57.143 0.00 0.00 0.00 2.90
735 751 1.338107 CGCACACCCTATCCCTATGA 58.662 55.000 0.00 0.00 0.00 2.15
736 752 1.048601 ACGCACACCCTATCCCTATG 58.951 55.000 0.00 0.00 0.00 2.23
737 753 1.048601 CACGCACACCCTATCCCTAT 58.951 55.000 0.00 0.00 0.00 2.57
738 754 0.324923 ACACGCACACCCTATCCCTA 60.325 55.000 0.00 0.00 0.00 3.53
739 755 1.612442 ACACGCACACCCTATCCCT 60.612 57.895 0.00 0.00 0.00 4.20
740 756 1.449601 CACACGCACACCCTATCCC 60.450 63.158 0.00 0.00 0.00 3.85
741 757 1.019278 CACACACGCACACCCTATCC 61.019 60.000 0.00 0.00 0.00 2.59
742 758 1.635663 GCACACACGCACACCCTATC 61.636 60.000 0.00 0.00 0.00 2.08
743 759 1.671054 GCACACACGCACACCCTAT 60.671 57.895 0.00 0.00 0.00 2.57
744 760 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
745 761 3.772853 ATGCACACACGCACACCCT 62.773 57.895 0.00 0.00 46.56 4.34
746 762 2.731587 GAATGCACACACGCACACCC 62.732 60.000 0.00 0.00 46.56 4.61
747 763 1.370414 GAATGCACACACGCACACC 60.370 57.895 0.00 0.00 46.56 4.16
748 764 0.040157 ATGAATGCACACACGCACAC 60.040 50.000 0.00 0.00 46.56 3.82
749 765 1.464219 CTATGAATGCACACACGCACA 59.536 47.619 0.00 0.00 46.56 4.57
750 766 1.202065 CCTATGAATGCACACACGCAC 60.202 52.381 0.00 0.00 46.56 5.34
752 768 0.378257 CCCTATGAATGCACACACGC 59.622 55.000 0.00 0.00 0.00 5.34
753 769 2.022764 TCCCTATGAATGCACACACG 57.977 50.000 0.00 0.00 0.00 4.49
754 770 3.544684 TCATCCCTATGAATGCACACAC 58.455 45.455 0.00 0.00 39.20 3.82
755 771 3.200605 ACTCATCCCTATGAATGCACACA 59.799 43.478 0.00 0.00 41.57 3.72
756 772 3.562973 CACTCATCCCTATGAATGCACAC 59.437 47.826 0.00 0.00 41.57 3.82
757 773 3.200605 ACACTCATCCCTATGAATGCACA 59.799 43.478 0.00 0.00 41.91 4.57
758 774 3.813443 ACACTCATCCCTATGAATGCAC 58.187 45.455 0.00 0.00 41.91 4.57
759 775 5.554070 CATACACTCATCCCTATGAATGCA 58.446 41.667 0.00 0.00 41.91 3.96
760 776 4.394300 GCATACACTCATCCCTATGAATGC 59.606 45.833 6.88 6.88 41.91 3.56
761 777 4.628766 CGCATACACTCATCCCTATGAATG 59.371 45.833 0.00 0.00 43.41 2.67
762 778 4.284490 ACGCATACACTCATCCCTATGAAT 59.716 41.667 0.00 0.00 41.57 2.57
763 779 3.641436 ACGCATACACTCATCCCTATGAA 59.359 43.478 0.00 0.00 41.57 2.57
764 780 3.005791 CACGCATACACTCATCCCTATGA 59.994 47.826 0.00 0.00 39.87 2.15
765 781 3.243873 ACACGCATACACTCATCCCTATG 60.244 47.826 0.00 0.00 0.00 2.23
766 782 2.965831 ACACGCATACACTCATCCCTAT 59.034 45.455 0.00 0.00 0.00 2.57
767 783 2.100749 CACACGCATACACTCATCCCTA 59.899 50.000 0.00 0.00 0.00 3.53
768 784 1.134699 CACACGCATACACTCATCCCT 60.135 52.381 0.00 0.00 0.00 4.20
769 785 1.290203 CACACGCATACACTCATCCC 58.710 55.000 0.00 0.00 0.00 3.85
770 786 2.010145 ACACACGCATACACTCATCC 57.990 50.000 0.00 0.00 0.00 3.51
771 787 6.149633 TCATATACACACGCATACACTCATC 58.850 40.000 0.00 0.00 0.00 2.92
772 788 6.084326 TCATATACACACGCATACACTCAT 57.916 37.500 0.00 0.00 0.00 2.90
773 789 5.508200 TCATATACACACGCATACACTCA 57.492 39.130 0.00 0.00 0.00 3.41
774 790 4.383052 GCTCATATACACACGCATACACTC 59.617 45.833 0.00 0.00 0.00 3.51
775 791 4.299155 GCTCATATACACACGCATACACT 58.701 43.478 0.00 0.00 0.00 3.55
776 792 3.119628 CGCTCATATACACACGCATACAC 59.880 47.826 0.00 0.00 0.00 2.90
777 793 3.305110 CGCTCATATACACACGCATACA 58.695 45.455 0.00 0.00 0.00 2.29
778 794 2.090658 GCGCTCATATACACACGCATAC 59.909 50.000 0.00 0.00 45.25 2.39
779 795 2.324860 GCGCTCATATACACACGCATA 58.675 47.619 0.00 0.00 45.25 3.14
780 796 1.139989 GCGCTCATATACACACGCAT 58.860 50.000 0.00 0.00 45.25 4.73
781 797 2.588731 GCGCTCATATACACACGCA 58.411 52.632 0.00 0.00 45.25 5.24
782 798 1.071239 CAAGCGCTCATATACACACGC 60.071 52.381 12.06 0.00 46.20 5.34
783 799 2.034591 CACAAGCGCTCATATACACACG 60.035 50.000 12.06 0.00 0.00 4.49
784 800 2.930040 ACACAAGCGCTCATATACACAC 59.070 45.455 12.06 0.00 0.00 3.82
785 801 3.245518 ACACAAGCGCTCATATACACA 57.754 42.857 12.06 0.00 0.00 3.72
786 802 4.142902 ACAAACACAAGCGCTCATATACAC 60.143 41.667 12.06 0.00 0.00 2.90
787 803 4.000325 ACAAACACAAGCGCTCATATACA 59.000 39.130 12.06 0.00 0.00 2.29
788 804 4.600012 ACAAACACAAGCGCTCATATAC 57.400 40.909 12.06 0.00 0.00 1.47
789 805 5.290885 CAGTACAAACACAAGCGCTCATATA 59.709 40.000 12.06 0.00 0.00 0.86
790 806 4.093408 CAGTACAAACACAAGCGCTCATAT 59.907 41.667 12.06 0.00 0.00 1.78
791 807 3.431912 CAGTACAAACACAAGCGCTCATA 59.568 43.478 12.06 0.00 0.00 2.15
792 808 2.224079 CAGTACAAACACAAGCGCTCAT 59.776 45.455 12.06 0.00 0.00 2.90
793 809 1.597195 CAGTACAAACACAAGCGCTCA 59.403 47.619 12.06 0.00 0.00 4.26
794 810 1.864711 TCAGTACAAACACAAGCGCTC 59.135 47.619 12.06 0.00 0.00 5.03
795 811 1.948104 TCAGTACAAACACAAGCGCT 58.052 45.000 2.64 2.64 0.00 5.92
796 812 2.574322 CATCAGTACAAACACAAGCGC 58.426 47.619 0.00 0.00 0.00 5.92
797 813 2.224079 AGCATCAGTACAAACACAAGCG 59.776 45.455 0.00 0.00 0.00 4.68
798 814 3.250762 TGAGCATCAGTACAAACACAAGC 59.749 43.478 0.00 0.00 42.56 4.01
824 840 1.339929 GGTCCACCATTCGCAGTTTTT 59.660 47.619 0.00 0.00 35.64 1.94
825 841 0.958822 GGTCCACCATTCGCAGTTTT 59.041 50.000 0.00 0.00 35.64 2.43
826 842 1.234615 CGGTCCACCATTCGCAGTTT 61.235 55.000 0.00 0.00 35.14 2.66
827 843 1.671054 CGGTCCACCATTCGCAGTT 60.671 57.895 0.00 0.00 35.14 3.16
828 844 2.047274 CGGTCCACCATTCGCAGT 60.047 61.111 0.00 0.00 35.14 4.40
829 845 2.593468 ATCCGGTCCACCATTCGCAG 62.593 60.000 0.00 0.00 35.14 5.18
830 846 2.587322 GATCCGGTCCACCATTCGCA 62.587 60.000 0.00 0.00 35.14 5.10
831 847 1.887707 GATCCGGTCCACCATTCGC 60.888 63.158 0.00 0.00 35.14 4.70
832 848 1.591594 CGATCCGGTCCACCATTCG 60.592 63.158 0.00 0.00 35.14 3.34
833 849 1.227556 CCGATCCGGTCCACCATTC 60.228 63.158 0.00 0.00 42.73 2.67
834 850 2.742116 CCCGATCCGGTCCACCATT 61.742 63.158 0.00 0.00 46.80 3.16
835 851 3.161450 CCCGATCCGGTCCACCAT 61.161 66.667 0.00 0.00 46.80 3.55
836 852 4.385740 TCCCGATCCGGTCCACCA 62.386 66.667 0.00 0.00 46.80 4.17
844 860 4.189188 ACGTTCGCTCCCGATCCG 62.189 66.667 0.00 0.00 43.97 4.18
903 919 5.010820 AGCAAACTCGTCTCTTATATACCCC 59.989 44.000 0.00 0.00 0.00 4.95
950 966 2.094390 GGTGTCTTGTGCGGTACTATCA 60.094 50.000 0.00 0.00 0.00 2.15
951 967 2.165845 AGGTGTCTTGTGCGGTACTATC 59.834 50.000 0.00 0.00 0.00 2.08
995 1012 3.570638 CTTGCTGCGCCATCCTCG 61.571 66.667 4.18 0.00 0.00 4.63
1016 1033 1.164411 CACGGCAAGTATGGAAGCAA 58.836 50.000 0.00 0.00 0.00 3.91
1032 1049 3.491598 AACAAGGACCAGGGCCACG 62.492 63.158 16.27 6.24 0.00 4.94
1038 1055 0.675633 CAAAGGCAACAAGGACCAGG 59.324 55.000 0.00 0.00 41.41 4.45
1054 1071 0.531657 CCTGCGGGAAATGATGCAAA 59.468 50.000 5.28 0.00 36.82 3.68
1056 1073 0.254462 TACCTGCGGGAAATGATGCA 59.746 50.000 21.41 0.00 36.25 3.96
1060 1077 3.146066 GCATATTACCTGCGGGAAATGA 58.854 45.455 21.41 0.00 36.25 2.57
1068 1085 5.342525 CGTCTAAGTAAGCATATTACCTGCG 59.657 44.000 0.00 0.00 44.38 5.18
1091 1834 5.174943 ATGTTGATATACATGCGTACACACG 59.825 40.000 0.00 0.00 39.92 4.49
1172 1923 6.753279 TGCTTAATTAATGCACTCTTTCATGC 59.247 34.615 14.44 4.55 42.40 4.06
1173 1924 8.867112 ATGCTTAATTAATGCACTCTTTCATG 57.133 30.769 18.39 0.00 39.63 3.07
1178 1929 9.669353 CGATTAATGCTTAATTAATGCACTCTT 57.331 29.630 18.39 13.64 46.77 2.85
1180 1931 7.805071 AGCGATTAATGCTTAATTAATGCACTC 59.195 33.333 18.39 13.46 46.77 3.51
1181 1932 7.651808 AGCGATTAATGCTTAATTAATGCACT 58.348 30.769 18.39 13.28 46.77 4.40
1182 1933 7.858052 AGCGATTAATGCTTAATTAATGCAC 57.142 32.000 18.39 9.23 46.77 4.57
1196 1947 7.306749 GCCCAAATACAAATGAAGCGATTAATG 60.307 37.037 0.00 0.00 0.00 1.90
1197 1948 6.701400 GCCCAAATACAAATGAAGCGATTAAT 59.299 34.615 0.00 0.00 0.00 1.40
1198 1949 6.039616 GCCCAAATACAAATGAAGCGATTAA 58.960 36.000 0.00 0.00 0.00 1.40
1203 1963 2.184448 CGCCCAAATACAAATGAAGCG 58.816 47.619 0.00 0.00 34.52 4.68
1204 1964 2.094234 ACCGCCCAAATACAAATGAAGC 60.094 45.455 0.00 0.00 0.00 3.86
1209 1969 4.707448 TGTAATCACCGCCCAAATACAAAT 59.293 37.500 0.00 0.00 0.00 2.32
1284 2052 2.086869 CGATGGAGTGCACTGGAAAAT 58.913 47.619 27.27 9.95 0.00 1.82
1621 5046 1.877443 AGCGCCGTTTGTATGTTCTTT 59.123 42.857 2.29 0.00 0.00 2.52
1685 5110 3.103911 GACCACGTCGAACCGCAG 61.104 66.667 0.00 0.00 0.00 5.18
1705 5130 2.686106 GAGGGCGGGGAGGTGTTA 60.686 66.667 0.00 0.00 0.00 2.41
1911 5342 2.325082 ATGGCGTCGAACAGGTTGC 61.325 57.895 0.00 0.00 0.00 4.17
1951 5382 1.302832 CTTGCCGGCTTTCTCCAGT 60.303 57.895 29.70 0.00 0.00 4.00
1974 5405 3.025978 TCGGATATGACCACCTTAACGT 58.974 45.455 0.00 0.00 0.00 3.99
1975 5406 3.317149 TCTCGGATATGACCACCTTAACG 59.683 47.826 0.00 0.00 0.00 3.18
2213 5644 9.745323 GCATGAATTTTGCATTTAGAAAGTAAC 57.255 29.630 0.00 0.00 39.90 2.50
2234 5722 3.489355 AGTGGTTGACTGAAATGCATGA 58.511 40.909 0.00 0.00 31.75 3.07
2290 5778 7.873719 TTTCTGTGACTTGTTTTATTGGAGA 57.126 32.000 0.00 0.00 0.00 3.71
2315 5803 4.262420 GGGCAATTTACTCAGCTTTTTCCA 60.262 41.667 0.00 0.00 0.00 3.53
2322 5810 3.760684 CTCAAAGGGCAATTTACTCAGCT 59.239 43.478 0.00 0.00 0.00 4.24
2323 5811 3.758554 TCTCAAAGGGCAATTTACTCAGC 59.241 43.478 0.00 0.00 0.00 4.26
2325 5813 5.241403 TCTCTCAAAGGGCAATTTACTCA 57.759 39.130 0.00 0.00 0.00 3.41
2326 5814 6.575162 TTTCTCTCAAAGGGCAATTTACTC 57.425 37.500 0.00 0.00 0.00 2.59
2327 5815 6.976934 TTTTCTCTCAAAGGGCAATTTACT 57.023 33.333 0.00 0.00 0.00 2.24
2328 5816 6.146184 GCTTTTTCTCTCAAAGGGCAATTTAC 59.854 38.462 0.00 0.00 32.66 2.01
2329 5817 6.041979 AGCTTTTTCTCTCAAAGGGCAATTTA 59.958 34.615 0.00 0.00 32.66 1.40
2330 5818 5.059161 GCTTTTTCTCTCAAAGGGCAATTT 58.941 37.500 0.00 0.00 32.66 1.82
2331 5819 4.346127 AGCTTTTTCTCTCAAAGGGCAATT 59.654 37.500 0.00 0.00 32.66 2.32
2332 5820 3.899980 AGCTTTTTCTCTCAAAGGGCAAT 59.100 39.130 0.00 0.00 32.66 3.56
2333 5821 3.068590 CAGCTTTTTCTCTCAAAGGGCAA 59.931 43.478 0.00 0.00 32.66 4.52
2334 5822 2.624838 CAGCTTTTTCTCTCAAAGGGCA 59.375 45.455 0.00 0.00 32.66 5.36
2335 5823 2.887152 TCAGCTTTTTCTCTCAAAGGGC 59.113 45.455 0.00 0.00 32.66 5.19
2336 5824 4.140536 ACTCAGCTTTTTCTCTCAAAGGG 58.859 43.478 0.00 0.00 32.66 3.95
2337 5825 6.867662 TTACTCAGCTTTTTCTCTCAAAGG 57.132 37.500 0.00 0.00 32.66 3.11
2338 5826 9.392021 GAATTTACTCAGCTTTTTCTCTCAAAG 57.608 33.333 0.00 0.00 34.80 2.77
2339 5827 8.352942 GGAATTTACTCAGCTTTTTCTCTCAAA 58.647 33.333 0.00 0.00 0.00 2.69
2340 5828 7.502226 TGGAATTTACTCAGCTTTTTCTCTCAA 59.498 33.333 0.00 0.00 0.00 3.02
2341 5829 6.998074 TGGAATTTACTCAGCTTTTTCTCTCA 59.002 34.615 0.00 0.00 0.00 3.27
2342 5830 7.174080 AGTGGAATTTACTCAGCTTTTTCTCTC 59.826 37.037 0.00 0.00 0.00 3.20
2343 5831 7.001073 AGTGGAATTTACTCAGCTTTTTCTCT 58.999 34.615 0.00 0.00 0.00 3.10
2344 5832 7.080724 CAGTGGAATTTACTCAGCTTTTTCTC 58.919 38.462 0.00 0.00 0.00 2.87
2345 5833 6.547510 ACAGTGGAATTTACTCAGCTTTTTCT 59.452 34.615 0.00 0.00 0.00 2.52
2346 5834 6.739112 ACAGTGGAATTTACTCAGCTTTTTC 58.261 36.000 0.00 0.00 0.00 2.29
2347 5835 6.715347 ACAGTGGAATTTACTCAGCTTTTT 57.285 33.333 0.00 0.00 0.00 1.94
2348 5836 6.715347 AACAGTGGAATTTACTCAGCTTTT 57.285 33.333 0.00 0.00 0.00 2.27
2349 5837 6.715347 AAACAGTGGAATTTACTCAGCTTT 57.285 33.333 0.00 0.00 0.00 3.51
2350 5838 6.715347 AAAACAGTGGAATTTACTCAGCTT 57.285 33.333 0.00 0.00 0.00 3.74
2351 5839 6.715347 AAAAACAGTGGAATTTACTCAGCT 57.285 33.333 0.00 0.00 0.00 4.24
2352 5840 8.915654 CATTAAAAACAGTGGAATTTACTCAGC 58.084 33.333 0.00 0.00 0.00 4.26
2353 5841 9.965824 ACATTAAAAACAGTGGAATTTACTCAG 57.034 29.630 0.00 0.00 0.00 3.35
2354 5842 9.959749 GACATTAAAAACAGTGGAATTTACTCA 57.040 29.630 0.00 0.00 0.00 3.41
2406 5894 1.496934 GGGGCAAAATTTGACACACG 58.503 50.000 14.12 0.00 43.38 4.49
2445 5969 0.796312 GCCCGTAGTGTCACATTGTG 59.204 55.000 10.64 10.64 34.45 3.33
2451 5975 1.674962 CTAGTAGGCCCGTAGTGTCAC 59.325 57.143 0.00 0.00 0.00 3.67
2453 5977 2.220313 CTCTAGTAGGCCCGTAGTGTC 58.780 57.143 0.00 0.00 0.00 3.67
2454 5978 1.563410 ACTCTAGTAGGCCCGTAGTGT 59.437 52.381 0.00 2.26 0.00 3.55
2455 5979 1.948145 CACTCTAGTAGGCCCGTAGTG 59.052 57.143 0.00 1.26 0.00 2.74
2456 5980 1.842562 TCACTCTAGTAGGCCCGTAGT 59.157 52.381 0.00 0.00 0.00 2.73
2457 5981 2.220313 GTCACTCTAGTAGGCCCGTAG 58.780 57.143 0.00 0.00 0.00 3.51
2458 5982 1.561076 TGTCACTCTAGTAGGCCCGTA 59.439 52.381 0.00 0.00 0.00 4.02
2459 5983 0.330604 TGTCACTCTAGTAGGCCCGT 59.669 55.000 0.00 0.00 0.00 5.28
2461 5985 0.739561 CGTGTCACTCTAGTAGGCCC 59.260 60.000 0.00 0.00 0.00 5.80
2481 6526 4.225497 CCAGAAAGATGGGTCCGC 57.775 61.111 0.00 0.00 36.64 5.54
2641 6690 8.792830 TTCCTTCTATTTGTAGGTCAGATTTG 57.207 34.615 0.00 0.00 35.11 2.32
2642 6691 9.807921 TTTTCCTTCTATTTGTAGGTCAGATTT 57.192 29.630 0.00 0.00 35.11 2.17
2674 6723 3.565482 ACACTGTTCGCATCTGATTTTGT 59.435 39.130 0.00 0.00 0.00 2.83
2677 6726 3.402110 TGACACTGTTCGCATCTGATTT 58.598 40.909 0.00 0.00 0.00 2.17
2681 6730 3.818961 ATTTGACACTGTTCGCATCTG 57.181 42.857 0.00 0.00 0.00 2.90
2682 6731 6.500684 AATAATTTGACACTGTTCGCATCT 57.499 33.333 0.00 0.00 0.00 2.90
2687 6736 7.696453 GGGTGAATAATAATTTGACACTGTTCG 59.304 37.037 0.00 0.00 0.00 3.95
2701 6750 6.194235 AGTGGCATCTTTGGGTGAATAATAA 58.806 36.000 0.00 0.00 0.00 1.40
2703 6752 4.613437 AGTGGCATCTTTGGGTGAATAAT 58.387 39.130 0.00 0.00 0.00 1.28
2704 6753 4.046286 AGTGGCATCTTTGGGTGAATAA 57.954 40.909 0.00 0.00 0.00 1.40
2711 6760 3.355378 TGTGAATAGTGGCATCTTTGGG 58.645 45.455 0.00 0.00 0.00 4.12
2765 6814 5.695851 AAAATCAGCTCAAAACTCGATGT 57.304 34.783 0.00 0.00 0.00 3.06
2790 6839 2.381911 GGGGTATGTCTACAACTCCGA 58.618 52.381 0.00 0.00 0.00 4.55
2791 6840 1.066605 CGGGGTATGTCTACAACTCCG 59.933 57.143 16.63 16.63 0.00 4.63
2792 6841 1.202498 GCGGGGTATGTCTACAACTCC 60.202 57.143 4.98 4.98 0.00 3.85
2810 6859 6.257423 TGAATTATTTGACAACATAGCTGCG 58.743 36.000 0.00 0.00 0.00 5.18
2905 6955 2.868964 TGGCCAAGGGAGACTAGTAT 57.131 50.000 0.61 0.00 0.00 2.12
2906 6956 2.570302 GTTTGGCCAAGGGAGACTAGTA 59.430 50.000 19.48 0.00 0.00 1.82
2907 6957 1.351350 GTTTGGCCAAGGGAGACTAGT 59.649 52.381 19.48 0.00 0.00 2.57
2908 6958 1.630878 AGTTTGGCCAAGGGAGACTAG 59.369 52.381 19.48 0.00 0.00 2.57
2909 6959 1.628846 GAGTTTGGCCAAGGGAGACTA 59.371 52.381 19.48 0.00 0.00 2.59
2910 6960 0.402121 GAGTTTGGCCAAGGGAGACT 59.598 55.000 19.48 18.46 0.00 3.24
2935 6985 4.999950 AGTTAGAGGAATGTGCACTTTCTG 59.000 41.667 32.23 0.00 32.53 3.02
2963 7013 7.984002 TTGTAACATTGTGATTGAGTTGTTG 57.016 32.000 0.00 0.00 0.00 3.33
2982 7032 6.092122 CCGTGAATGCTAGTTCAGAATTGTAA 59.908 38.462 0.00 0.00 38.68 2.41
2984 7034 4.393062 CCGTGAATGCTAGTTCAGAATTGT 59.607 41.667 0.00 0.00 38.68 2.71
3003 7053 0.535335 TAGCTTAGACTTGGGCCGTG 59.465 55.000 0.00 0.00 0.00 4.94
3005 7055 0.527817 CGTAGCTTAGACTTGGGCCG 60.528 60.000 0.00 0.00 0.00 6.13
3011 7061 5.443185 TGTACACAACGTAGCTTAGACTT 57.557 39.130 0.00 0.00 0.00 3.01
3020 7070 4.625742 AGCTTAAGCATGTACACAACGTAG 59.374 41.667 28.39 0.00 45.16 3.51
3121 7214 6.096673 ACAGGGGCAGTTAAAAATTAGTTG 57.903 37.500 0.00 0.00 0.00 3.16
3124 7217 6.208599 TCTCAACAGGGGCAGTTAAAAATTAG 59.791 38.462 0.00 0.00 0.00 1.73
3181 7274 1.773410 CCGTTTTGCCGGTTTTTAGG 58.227 50.000 1.90 0.00 43.07 2.69
3190 7283 1.468520 AGATCACATTCCGTTTTGCCG 59.531 47.619 0.00 0.00 0.00 5.69
3191 7284 2.867429 CAGATCACATTCCGTTTTGCC 58.133 47.619 0.00 0.00 0.00 4.52
3192 7285 2.253603 GCAGATCACATTCCGTTTTGC 58.746 47.619 0.00 0.00 0.00 3.68
3193 7286 2.508867 CGCAGATCACATTCCGTTTTG 58.491 47.619 0.00 0.00 0.00 2.44
3194 7287 1.468520 CCGCAGATCACATTCCGTTTT 59.531 47.619 0.00 0.00 0.00 2.43
3195 7288 1.086696 CCGCAGATCACATTCCGTTT 58.913 50.000 0.00 0.00 0.00 3.60
3196 7289 0.036388 ACCGCAGATCACATTCCGTT 60.036 50.000 0.00 0.00 0.00 4.44
3197 7290 0.036388 AACCGCAGATCACATTCCGT 60.036 50.000 0.00 0.00 0.00 4.69
3198 7291 0.374758 CAACCGCAGATCACATTCCG 59.625 55.000 0.00 0.00 0.00 4.30
3199 7292 1.453155 ACAACCGCAGATCACATTCC 58.547 50.000 0.00 0.00 0.00 3.01
3200 7293 2.029244 CGTACAACCGCAGATCACATTC 59.971 50.000 0.00 0.00 0.00 2.67
3201 7294 1.999735 CGTACAACCGCAGATCACATT 59.000 47.619 0.00 0.00 0.00 2.71
3202 7295 1.067142 ACGTACAACCGCAGATCACAT 60.067 47.619 0.00 0.00 0.00 3.21
3203 7296 0.315886 ACGTACAACCGCAGATCACA 59.684 50.000 0.00 0.00 0.00 3.58
3204 7297 0.713883 CACGTACAACCGCAGATCAC 59.286 55.000 0.00 0.00 0.00 3.06
3205 7298 0.315886 ACACGTACAACCGCAGATCA 59.684 50.000 0.00 0.00 0.00 2.92
3206 7299 3.117589 ACACGTACAACCGCAGATC 57.882 52.632 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.