Multiple sequence alignment - TraesCS3A01G454900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G454900 chr3A 100.000 4388 0 0 1 4388 692958458 692962845 0.000000e+00 8104.0
1 TraesCS3A01G454900 chr3B 87.871 2968 205 64 505 3415 739024132 739027001 0.000000e+00 3343.0
2 TraesCS3A01G454900 chr3B 85.820 677 63 19 3460 4130 739027003 739027652 0.000000e+00 688.0
3 TraesCS3A01G454900 chr3B 88.327 257 16 6 4122 4375 739029145 739029390 3.320000e-76 296.0
4 TraesCS3A01G454900 chr3D 84.298 1624 141 62 1378 2955 556025392 556026947 0.000000e+00 1482.0
5 TraesCS3A01G454900 chr3D 93.427 639 26 9 3758 4388 556027554 556028184 0.000000e+00 933.0
6 TraesCS3A01G454900 chr3D 86.552 870 29 32 471 1323 556024386 556025184 0.000000e+00 878.0
7 TraesCS3A01G454900 chr3D 90.618 469 40 3 3048 3512 556026973 556027441 1.730000e-173 619.0
8 TraesCS3A01G454900 chr6D 88.704 301 32 2 133 432 394593540 394593241 2.490000e-97 366.0
9 TraesCS3A01G454900 chr6D 94.048 84 5 0 56 139 394593649 394593566 1.280000e-25 128.0
10 TraesCS3A01G454900 chr5A 87.407 135 16 1 6 139 105433318 105433184 2.110000e-33 154.0
11 TraesCS3A01G454900 chrUn 81.538 130 18 5 1 128 76223702 76223827 7.760000e-18 102.0
12 TraesCS3A01G454900 chrUn 81.538 130 18 5 1 128 446490598 446490723 7.760000e-18 102.0
13 TraesCS3A01G454900 chr5B 90.000 80 7 1 55 133 661278737 661278658 7.760000e-18 102.0
14 TraesCS3A01G454900 chr5B 88.889 81 7 1 55 133 661282236 661282156 1.000000e-16 99.0
15 TraesCS3A01G454900 chr5B 81.481 81 13 1 55 133 661252329 661252249 1.020000e-06 65.8
16 TraesCS3A01G454900 chr7B 83.146 89 12 3 47 134 237238476 237238390 1.310000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G454900 chr3A 692958458 692962845 4387 False 8104.000000 8104 100.000000 1 4388 1 chr3A.!!$F1 4387
1 TraesCS3A01G454900 chr3B 739024132 739029390 5258 False 1442.333333 3343 87.339333 505 4375 3 chr3B.!!$F1 3870
2 TraesCS3A01G454900 chr3D 556024386 556028184 3798 False 978.000000 1482 88.723750 471 4388 4 chr3D.!!$F1 3917

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
142 143 0.028902 GACCAACACGAACAGGCAAC 59.971 55.0 0.00 0.00 0.00 4.17 F
390 391 0.036765 ACGGTTGGTCACGCACATAT 60.037 50.0 0.00 0.00 0.00 1.78 F
423 424 0.107848 ATAGACCGGCCGAAAGTTGG 60.108 55.0 30.73 10.69 0.00 3.77 F
994 1035 0.322546 GCAATCCTTCCCGTTCCACT 60.323 55.0 0.00 0.00 0.00 4.00 F
1954 2178 1.003646 ACTCCCTGCTCACTAGAGGA 58.996 55.0 0.00 0.00 42.33 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1576 1798 0.237235 AGCATTGTAAACGTGCGGTG 59.763 50.000 0.00 0.00 43.37 4.94 R
2358 2592 0.328258 TTCAGCTCCTGGCCCTAAAC 59.672 55.000 0.00 0.00 43.05 2.01 R
2403 2637 3.186613 CGAGATGCCATCAATGATCAGTG 59.813 47.826 16.89 16.89 0.00 3.66 R
2463 2697 1.544246 GGGAAAACATTCCACGGAAGG 59.456 52.381 8.86 8.86 42.89 3.46 R
3452 3727 0.174845 CATGACCTACCGGAGCGAAA 59.825 55.000 9.46 0.00 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.410225 CTGGAACCAGCAGTGCAT 57.590 55.556 19.20 0.00 37.24 3.96
19 20 1.880894 CTGGAACCAGCAGTGCATG 59.119 57.895 19.20 12.27 37.24 4.06
20 21 1.592400 CTGGAACCAGCAGTGCATGG 61.592 60.000 23.79 23.79 42.60 3.66
21 22 1.303561 GGAACCAGCAGTGCATGGA 60.304 57.895 29.06 0.00 39.02 3.41
22 23 1.310933 GGAACCAGCAGTGCATGGAG 61.311 60.000 29.06 12.59 39.02 3.86
23 24 1.930908 GAACCAGCAGTGCATGGAGC 61.931 60.000 29.06 19.61 45.96 4.70
24 25 2.045242 CCAGCAGTGCATGGAGCT 60.045 61.111 22.06 0.00 45.94 4.09
25 26 1.222661 CCAGCAGTGCATGGAGCTA 59.777 57.895 22.06 0.00 45.94 3.32
26 27 1.094073 CCAGCAGTGCATGGAGCTAC 61.094 60.000 22.06 0.00 45.94 3.58
27 28 1.153489 AGCAGTGCATGGAGCTACG 60.153 57.895 19.20 0.00 45.94 3.51
28 29 1.153568 GCAGTGCATGGAGCTACGA 60.154 57.895 11.09 0.00 45.94 3.43
29 30 1.424493 GCAGTGCATGGAGCTACGAC 61.424 60.000 11.09 0.00 45.94 4.34
30 31 0.807667 CAGTGCATGGAGCTACGACC 60.808 60.000 0.00 0.00 45.94 4.79
31 32 1.878522 GTGCATGGAGCTACGACCG 60.879 63.158 0.00 0.00 45.94 4.79
32 33 2.279517 GCATGGAGCTACGACCGG 60.280 66.667 0.00 0.00 41.15 5.28
33 34 2.279517 CATGGAGCTACGACCGGC 60.280 66.667 0.00 0.00 0.00 6.13
34 35 2.758327 ATGGAGCTACGACCGGCA 60.758 61.111 0.00 0.00 0.00 5.69
35 36 2.786495 ATGGAGCTACGACCGGCAG 61.786 63.158 0.00 0.00 0.00 4.85
36 37 3.138798 GGAGCTACGACCGGCAGA 61.139 66.667 0.00 0.00 0.00 4.26
37 38 2.409651 GAGCTACGACCGGCAGAG 59.590 66.667 0.00 0.00 0.00 3.35
38 39 3.127352 GAGCTACGACCGGCAGAGG 62.127 68.421 0.00 0.00 37.30 3.69
40 41 2.490217 CTACGACCGGCAGAGGTG 59.510 66.667 0.00 0.00 46.09 4.00
41 42 2.282674 TACGACCGGCAGAGGTGT 60.283 61.111 0.00 4.60 46.09 4.16
42 43 1.002257 TACGACCGGCAGAGGTGTA 60.002 57.895 0.00 3.79 46.09 2.90
43 44 1.028330 TACGACCGGCAGAGGTGTAG 61.028 60.000 0.00 0.00 46.09 2.74
44 45 2.184579 GACCGGCAGAGGTGTAGC 59.815 66.667 0.00 0.00 46.09 3.58
45 46 2.283966 ACCGGCAGAGGTGTAGCT 60.284 61.111 0.00 0.00 44.07 3.32
46 47 2.185350 CCGGCAGAGGTGTAGCTG 59.815 66.667 0.00 0.00 35.28 4.24
47 48 2.185350 CGGCAGAGGTGTAGCTGG 59.815 66.667 0.00 0.00 32.83 4.85
48 49 2.586792 GGCAGAGGTGTAGCTGGG 59.413 66.667 0.00 0.00 32.83 4.45
49 50 1.990060 GGCAGAGGTGTAGCTGGGA 60.990 63.158 0.00 0.00 32.83 4.37
50 51 1.519719 GCAGAGGTGTAGCTGGGAG 59.480 63.158 0.00 0.00 32.83 4.30
51 52 0.972983 GCAGAGGTGTAGCTGGGAGA 60.973 60.000 0.00 0.00 32.83 3.71
52 53 1.110442 CAGAGGTGTAGCTGGGAGAG 58.890 60.000 0.00 0.00 0.00 3.20
53 54 1.003646 AGAGGTGTAGCTGGGAGAGA 58.996 55.000 0.00 0.00 0.00 3.10
54 55 1.064017 AGAGGTGTAGCTGGGAGAGAG 60.064 57.143 0.00 0.00 0.00 3.20
55 56 0.032615 AGGTGTAGCTGGGAGAGAGG 60.033 60.000 0.00 0.00 0.00 3.69
56 57 0.324830 GGTGTAGCTGGGAGAGAGGT 60.325 60.000 0.00 0.00 0.00 3.85
57 58 1.063867 GGTGTAGCTGGGAGAGAGGTA 60.064 57.143 0.00 0.00 0.00 3.08
58 59 2.425102 GGTGTAGCTGGGAGAGAGGTAT 60.425 54.545 0.00 0.00 0.00 2.73
59 60 3.301274 GTGTAGCTGGGAGAGAGGTATT 58.699 50.000 0.00 0.00 0.00 1.89
60 61 3.707102 GTGTAGCTGGGAGAGAGGTATTT 59.293 47.826 0.00 0.00 0.00 1.40
61 62 4.162509 GTGTAGCTGGGAGAGAGGTATTTT 59.837 45.833 0.00 0.00 0.00 1.82
62 63 4.783227 TGTAGCTGGGAGAGAGGTATTTTT 59.217 41.667 0.00 0.00 0.00 1.94
63 64 4.227864 AGCTGGGAGAGAGGTATTTTTG 57.772 45.455 0.00 0.00 0.00 2.44
64 65 2.685388 GCTGGGAGAGAGGTATTTTTGC 59.315 50.000 0.00 0.00 0.00 3.68
65 66 3.623453 GCTGGGAGAGAGGTATTTTTGCT 60.623 47.826 0.00 0.00 0.00 3.91
66 67 3.944015 CTGGGAGAGAGGTATTTTTGCTG 59.056 47.826 0.00 0.00 0.00 4.41
67 68 3.282885 GGGAGAGAGGTATTTTTGCTGG 58.717 50.000 0.00 0.00 0.00 4.85
68 69 3.054361 GGGAGAGAGGTATTTTTGCTGGA 60.054 47.826 0.00 0.00 0.00 3.86
69 70 4.567747 GGGAGAGAGGTATTTTTGCTGGAA 60.568 45.833 0.00 0.00 0.00 3.53
70 71 4.396478 GGAGAGAGGTATTTTTGCTGGAAC 59.604 45.833 0.00 0.00 0.00 3.62
71 72 4.336280 AGAGAGGTATTTTTGCTGGAACC 58.664 43.478 0.00 0.00 0.00 3.62
72 73 4.079253 GAGAGGTATTTTTGCTGGAACCA 58.921 43.478 0.00 0.00 0.00 3.67
73 74 4.677182 AGAGGTATTTTTGCTGGAACCAT 58.323 39.130 0.00 0.00 0.00 3.55
74 75 4.463891 AGAGGTATTTTTGCTGGAACCATG 59.536 41.667 0.00 0.00 0.00 3.66
75 76 4.159557 AGGTATTTTTGCTGGAACCATGT 58.840 39.130 0.00 0.00 0.00 3.21
76 77 4.021192 AGGTATTTTTGCTGGAACCATGTG 60.021 41.667 0.00 0.00 0.00 3.21
77 78 4.262420 GGTATTTTTGCTGGAACCATGTGT 60.262 41.667 0.00 0.00 0.00 3.72
78 79 3.451141 TTTTTGCTGGAACCATGTGTC 57.549 42.857 0.00 0.00 0.00 3.67
79 80 2.064434 TTTGCTGGAACCATGTGTCA 57.936 45.000 0.00 0.00 0.00 3.58
80 81 2.064434 TTGCTGGAACCATGTGTCAA 57.936 45.000 0.00 0.00 0.00 3.18
81 82 2.291209 TGCTGGAACCATGTGTCAAT 57.709 45.000 0.00 0.00 0.00 2.57
82 83 2.596346 TGCTGGAACCATGTGTCAATT 58.404 42.857 0.00 0.00 0.00 2.32
83 84 2.964464 TGCTGGAACCATGTGTCAATTT 59.036 40.909 0.00 0.00 0.00 1.82
84 85 3.387374 TGCTGGAACCATGTGTCAATTTT 59.613 39.130 0.00 0.00 0.00 1.82
85 86 3.742369 GCTGGAACCATGTGTCAATTTTG 59.258 43.478 0.00 0.00 0.00 2.44
86 87 3.726607 TGGAACCATGTGTCAATTTTGC 58.273 40.909 0.00 0.00 0.00 3.68
87 88 3.387374 TGGAACCATGTGTCAATTTTGCT 59.613 39.130 0.00 0.00 0.00 3.91
88 89 3.742369 GGAACCATGTGTCAATTTTGCTG 59.258 43.478 0.00 0.00 0.00 4.41
89 90 2.758009 ACCATGTGTCAATTTTGCTGC 58.242 42.857 0.00 0.00 0.00 5.25
90 91 2.102757 ACCATGTGTCAATTTTGCTGCA 59.897 40.909 0.00 0.00 0.00 4.41
91 92 3.244284 ACCATGTGTCAATTTTGCTGCAT 60.244 39.130 1.84 0.00 0.00 3.96
92 93 3.369756 CCATGTGTCAATTTTGCTGCATC 59.630 43.478 1.84 0.00 0.00 3.91
93 94 3.029320 TGTGTCAATTTTGCTGCATCC 57.971 42.857 1.84 0.00 0.00 3.51
94 95 1.987770 GTGTCAATTTTGCTGCATCCG 59.012 47.619 1.84 0.00 0.00 4.18
95 96 1.067706 TGTCAATTTTGCTGCATCCGG 60.068 47.619 1.84 0.00 0.00 5.14
96 97 0.108709 TCAATTTTGCTGCATCCGGC 60.109 50.000 1.84 0.00 43.83 6.13
119 120 3.192799 TTTTTGCTGGAACCGGTGA 57.807 47.368 8.52 0.00 0.00 4.02
120 121 1.698506 TTTTTGCTGGAACCGGTGAT 58.301 45.000 8.52 0.00 0.00 3.06
121 122 0.958091 TTTTGCTGGAACCGGTGATG 59.042 50.000 8.52 0.00 0.00 3.07
122 123 0.109532 TTTGCTGGAACCGGTGATGA 59.890 50.000 8.52 0.00 0.00 2.92
123 124 0.321564 TTGCTGGAACCGGTGATGAG 60.322 55.000 8.52 3.04 0.00 2.90
124 125 1.191489 TGCTGGAACCGGTGATGAGA 61.191 55.000 8.52 0.00 0.00 3.27
125 126 0.741221 GCTGGAACCGGTGATGAGAC 60.741 60.000 8.52 0.00 0.00 3.36
126 127 0.108138 CTGGAACCGGTGATGAGACC 60.108 60.000 8.52 4.19 0.00 3.85
127 128 0.834261 TGGAACCGGTGATGAGACCA 60.834 55.000 8.52 6.91 35.50 4.02
128 129 0.323629 GGAACCGGTGATGAGACCAA 59.676 55.000 8.52 0.00 35.50 3.67
129 130 1.439679 GAACCGGTGATGAGACCAAC 58.560 55.000 8.52 0.00 35.50 3.77
130 131 0.762418 AACCGGTGATGAGACCAACA 59.238 50.000 8.52 0.00 35.50 3.33
131 132 0.034896 ACCGGTGATGAGACCAACAC 59.965 55.000 6.12 0.00 42.98 3.32
132 133 1.014044 CCGGTGATGAGACCAACACG 61.014 60.000 0.00 0.00 44.15 4.49
133 134 0.038618 CGGTGATGAGACCAACACGA 60.039 55.000 0.00 0.00 44.15 4.35
134 135 1.604438 CGGTGATGAGACCAACACGAA 60.604 52.381 0.00 0.00 44.15 3.85
135 136 1.798813 GGTGATGAGACCAACACGAAC 59.201 52.381 0.00 0.00 44.15 3.95
136 137 2.479837 GTGATGAGACCAACACGAACA 58.520 47.619 0.00 0.00 36.57 3.18
137 138 2.476619 GTGATGAGACCAACACGAACAG 59.523 50.000 0.00 0.00 36.57 3.16
138 139 2.069273 GATGAGACCAACACGAACAGG 58.931 52.381 0.00 0.00 0.00 4.00
139 140 0.531974 TGAGACCAACACGAACAGGC 60.532 55.000 0.00 0.00 0.00 4.85
140 141 0.531974 GAGACCAACACGAACAGGCA 60.532 55.000 0.00 0.00 0.00 4.75
141 142 0.107410 AGACCAACACGAACAGGCAA 60.107 50.000 0.00 0.00 0.00 4.52
142 143 0.028902 GACCAACACGAACAGGCAAC 59.971 55.000 0.00 0.00 0.00 4.17
143 144 0.678366 ACCAACACGAACAGGCAACA 60.678 50.000 0.00 0.00 41.41 3.33
144 145 0.667993 CCAACACGAACAGGCAACAT 59.332 50.000 0.00 0.00 41.41 2.71
145 146 1.600164 CCAACACGAACAGGCAACATG 60.600 52.381 0.00 0.00 41.41 3.21
146 147 0.667993 AACACGAACAGGCAACATGG 59.332 50.000 0.00 0.00 41.41 3.66
147 148 0.179032 ACACGAACAGGCAACATGGA 60.179 50.000 0.00 0.00 41.41 3.41
148 149 0.518636 CACGAACAGGCAACATGGAG 59.481 55.000 0.00 0.00 41.41 3.86
149 150 0.396435 ACGAACAGGCAACATGGAGA 59.604 50.000 0.00 0.00 41.41 3.71
150 151 1.081892 CGAACAGGCAACATGGAGAG 58.918 55.000 0.00 0.00 41.41 3.20
151 152 1.609061 CGAACAGGCAACATGGAGAGT 60.609 52.381 0.00 0.00 41.41 3.24
152 153 2.508526 GAACAGGCAACATGGAGAGTT 58.491 47.619 0.00 0.00 41.41 3.01
153 154 1.901591 ACAGGCAACATGGAGAGTTG 58.098 50.000 0.00 0.00 46.86 3.16
159 160 1.399440 CAACATGGAGAGTTGCATCCG 59.601 52.381 0.00 0.00 39.76 4.18
160 161 0.107508 ACATGGAGAGTTGCATCCGG 60.108 55.000 0.00 0.00 38.52 5.14
161 162 1.153086 ATGGAGAGTTGCATCCGGC 60.153 57.895 0.00 0.00 45.13 6.13
172 173 2.878906 GCATCCGGCAATTTGTTTTG 57.121 45.000 0.00 0.00 43.97 2.44
183 184 6.927933 GCAATTTGTTTTGCTACTATCGTT 57.072 33.333 2.08 0.00 46.66 3.85
184 185 6.741500 GCAATTTGTTTTGCTACTATCGTTG 58.258 36.000 2.08 0.00 46.66 4.10
185 186 6.580791 GCAATTTGTTTTGCTACTATCGTTGA 59.419 34.615 2.08 0.00 46.66 3.18
186 187 7.273381 GCAATTTGTTTTGCTACTATCGTTGAT 59.727 33.333 2.08 0.00 46.66 2.57
187 188 8.577939 CAATTTGTTTTGCTACTATCGTTGATG 58.422 33.333 0.00 0.00 0.00 3.07
188 189 5.794687 TGTTTTGCTACTATCGTTGATGG 57.205 39.130 0.00 0.00 0.00 3.51
189 190 5.483811 TGTTTTGCTACTATCGTTGATGGA 58.516 37.500 0.00 0.00 0.00 3.41
190 191 5.350365 TGTTTTGCTACTATCGTTGATGGAC 59.650 40.000 0.00 0.00 0.00 4.02
191 192 3.349488 TGCTACTATCGTTGATGGACG 57.651 47.619 0.00 0.00 44.06 4.79
199 200 2.876091 TCGTTGATGGACGAGAATGAC 58.124 47.619 0.00 0.00 46.09 3.06
200 201 1.583856 CGTTGATGGACGAGAATGACG 59.416 52.381 0.00 0.00 45.47 4.35
201 202 1.927174 GTTGATGGACGAGAATGACGG 59.073 52.381 0.00 0.00 34.93 4.79
202 203 0.459899 TGATGGACGAGAATGACGGG 59.540 55.000 0.00 0.00 34.93 5.28
203 204 0.249489 GATGGACGAGAATGACGGGG 60.249 60.000 0.00 0.00 34.93 5.73
204 205 1.686325 ATGGACGAGAATGACGGGGG 61.686 60.000 0.00 0.00 34.93 5.40
205 206 2.056223 GGACGAGAATGACGGGGGA 61.056 63.158 0.00 0.00 34.93 4.81
206 207 1.437986 GACGAGAATGACGGGGGAG 59.562 63.158 0.00 0.00 34.93 4.30
207 208 2.107141 CGAGAATGACGGGGGAGC 59.893 66.667 0.00 0.00 0.00 4.70
208 209 2.427245 CGAGAATGACGGGGGAGCT 61.427 63.158 0.00 0.00 0.00 4.09
209 210 1.144936 GAGAATGACGGGGGAGCTG 59.855 63.158 0.00 0.00 0.00 4.24
210 211 2.514824 GAATGACGGGGGAGCTGC 60.515 66.667 0.00 0.00 0.00 5.25
211 212 3.329542 GAATGACGGGGGAGCTGCA 62.330 63.158 7.79 0.00 0.00 4.41
212 213 2.615227 GAATGACGGGGGAGCTGCAT 62.615 60.000 7.79 0.00 0.00 3.96
213 214 2.615227 AATGACGGGGGAGCTGCATC 62.615 60.000 7.79 0.00 0.00 3.91
214 215 4.899239 GACGGGGGAGCTGCATCG 62.899 72.222 7.79 12.48 0.00 3.84
216 217 4.899239 CGGGGGAGCTGCATCGAC 62.899 72.222 7.79 0.00 0.00 4.20
217 218 4.554036 GGGGGAGCTGCATCGACC 62.554 72.222 7.79 0.00 0.00 4.79
218 219 3.474570 GGGGAGCTGCATCGACCT 61.475 66.667 7.79 0.00 0.00 3.85
219 220 2.586792 GGGAGCTGCATCGACCTT 59.413 61.111 7.79 0.00 0.00 3.50
220 221 1.078143 GGGAGCTGCATCGACCTTT 60.078 57.895 7.79 0.00 0.00 3.11
221 222 1.372087 GGGAGCTGCATCGACCTTTG 61.372 60.000 7.79 0.00 0.00 2.77
222 223 0.674895 GGAGCTGCATCGACCTTTGT 60.675 55.000 0.00 0.00 0.00 2.83
223 224 1.160137 GAGCTGCATCGACCTTTGTT 58.840 50.000 1.02 0.00 0.00 2.83
224 225 1.537202 GAGCTGCATCGACCTTTGTTT 59.463 47.619 1.02 0.00 0.00 2.83
225 226 1.956477 AGCTGCATCGACCTTTGTTTT 59.044 42.857 1.02 0.00 0.00 2.43
226 227 2.053627 GCTGCATCGACCTTTGTTTTG 58.946 47.619 0.00 0.00 0.00 2.44
227 228 2.287547 GCTGCATCGACCTTTGTTTTGA 60.288 45.455 0.00 0.00 0.00 2.69
228 229 3.612479 GCTGCATCGACCTTTGTTTTGAT 60.612 43.478 0.00 0.00 0.00 2.57
229 230 3.899734 TGCATCGACCTTTGTTTTGATG 58.100 40.909 0.00 0.00 34.59 3.07
230 231 3.244976 GCATCGACCTTTGTTTTGATGG 58.755 45.455 0.00 0.00 33.28 3.51
231 232 3.244976 CATCGACCTTTGTTTTGATGGC 58.755 45.455 0.00 0.00 31.06 4.40
232 233 1.265635 TCGACCTTTGTTTTGATGGCG 59.734 47.619 0.00 0.00 0.00 5.69
233 234 1.265635 CGACCTTTGTTTTGATGGCGA 59.734 47.619 0.00 0.00 0.00 5.54
234 235 2.665519 CGACCTTTGTTTTGATGGCGAG 60.666 50.000 0.00 0.00 0.00 5.03
235 236 2.552315 GACCTTTGTTTTGATGGCGAGA 59.448 45.455 0.00 0.00 0.00 4.04
236 237 3.157087 ACCTTTGTTTTGATGGCGAGAT 58.843 40.909 0.00 0.00 0.00 2.75
237 238 4.331968 ACCTTTGTTTTGATGGCGAGATA 58.668 39.130 0.00 0.00 0.00 1.98
238 239 4.949856 ACCTTTGTTTTGATGGCGAGATAT 59.050 37.500 0.00 0.00 0.00 1.63
239 240 5.163622 ACCTTTGTTTTGATGGCGAGATATG 60.164 40.000 0.00 0.00 0.00 1.78
240 241 5.066375 CCTTTGTTTTGATGGCGAGATATGA 59.934 40.000 0.00 0.00 0.00 2.15
241 242 5.484173 TTGTTTTGATGGCGAGATATGAC 57.516 39.130 0.00 0.00 0.00 3.06
242 243 3.555547 TGTTTTGATGGCGAGATATGACG 59.444 43.478 0.00 0.00 0.00 4.35
243 244 2.438868 TTGATGGCGAGATATGACGG 57.561 50.000 0.00 0.00 0.00 4.79
246 247 2.430921 GGCGAGATATGACGGCGG 60.431 66.667 13.24 0.00 43.98 6.13
247 248 2.335369 GCGAGATATGACGGCGGT 59.665 61.111 13.24 0.00 0.00 5.68
248 249 2.016704 GCGAGATATGACGGCGGTG 61.017 63.158 13.24 0.00 0.00 4.94
249 250 1.652563 CGAGATATGACGGCGGTGA 59.347 57.895 13.24 0.00 0.00 4.02
250 251 0.386100 CGAGATATGACGGCGGTGAG 60.386 60.000 13.24 0.00 0.00 3.51
251 252 0.669077 GAGATATGACGGCGGTGAGT 59.331 55.000 13.24 0.00 0.00 3.41
252 253 1.067212 GAGATATGACGGCGGTGAGTT 59.933 52.381 13.24 0.00 0.00 3.01
253 254 1.202417 AGATATGACGGCGGTGAGTTG 60.202 52.381 13.24 0.00 0.00 3.16
254 255 0.810031 ATATGACGGCGGTGAGTTGC 60.810 55.000 13.24 0.00 0.00 4.17
255 256 2.161078 TATGACGGCGGTGAGTTGCA 62.161 55.000 13.24 0.00 0.00 4.08
256 257 2.970324 GACGGCGGTGAGTTGCAA 60.970 61.111 13.24 0.00 0.00 4.08
257 258 3.236618 GACGGCGGTGAGTTGCAAC 62.237 63.158 22.17 22.17 0.00 4.17
258 259 4.025401 CGGCGGTGAGTTGCAACC 62.025 66.667 25.62 17.03 0.00 3.77
259 260 4.025401 GGCGGTGAGTTGCAACCG 62.025 66.667 25.62 23.00 41.22 4.44
260 261 4.025401 GCGGTGAGTTGCAACCGG 62.025 66.667 25.62 15.18 39.76 5.28
261 262 4.025401 CGGTGAGTTGCAACCGGC 62.025 66.667 25.62 15.63 45.13 6.13
277 278 3.843240 GCGAAGACGGCGAGCAAG 61.843 66.667 16.62 2.71 40.15 4.01
278 279 2.126463 CGAAGACGGCGAGCAAGA 60.126 61.111 16.62 0.00 35.72 3.02
279 280 1.517257 CGAAGACGGCGAGCAAGAT 60.517 57.895 16.62 0.00 35.72 2.40
280 281 1.746727 CGAAGACGGCGAGCAAGATG 61.747 60.000 16.62 0.00 35.72 2.90
281 282 2.029904 GAAGACGGCGAGCAAGATGC 62.030 60.000 16.62 0.00 45.46 3.91
302 303 4.865761 GGCATGTGGCATGCTGCG 62.866 66.667 26.45 3.30 46.21 5.18
303 304 4.124351 GCATGTGGCATGCTGCGT 62.124 61.111 22.29 9.18 46.21 5.24
304 305 2.569657 CATGTGGCATGCTGCGTT 59.430 55.556 18.92 0.04 46.21 4.84
305 306 1.515519 CATGTGGCATGCTGCGTTC 60.516 57.895 18.92 0.00 46.21 3.95
306 307 2.703798 ATGTGGCATGCTGCGTTCC 61.704 57.895 18.92 3.42 46.21 3.62
307 308 3.058160 GTGGCATGCTGCGTTCCT 61.058 61.111 18.92 0.00 46.21 3.36
308 309 2.282391 TGGCATGCTGCGTTCCTT 60.282 55.556 18.92 0.00 46.21 3.36
309 310 1.902918 TGGCATGCTGCGTTCCTTT 60.903 52.632 18.92 0.00 46.21 3.11
310 311 1.290009 GGCATGCTGCGTTCCTTTT 59.710 52.632 18.92 0.00 46.21 2.27
311 312 0.319813 GGCATGCTGCGTTCCTTTTT 60.320 50.000 18.92 0.00 46.21 1.94
329 330 2.286365 TTTTTCTCCCCGCAAGATGT 57.714 45.000 0.00 0.00 43.02 3.06
330 331 1.533625 TTTTCTCCCCGCAAGATGTG 58.466 50.000 0.00 0.00 43.02 3.21
340 341 3.820595 CAAGATGTGCAGAGGACGA 57.179 52.632 0.00 0.00 0.00 4.20
341 342 2.084610 CAAGATGTGCAGAGGACGAA 57.915 50.000 0.00 0.00 0.00 3.85
342 343 1.998315 CAAGATGTGCAGAGGACGAAG 59.002 52.381 0.00 0.00 0.00 3.79
343 344 0.534412 AGATGTGCAGAGGACGAAGG 59.466 55.000 0.00 0.00 0.00 3.46
344 345 0.460987 GATGTGCAGAGGACGAAGGG 60.461 60.000 0.00 0.00 0.00 3.95
345 346 1.903877 ATGTGCAGAGGACGAAGGGG 61.904 60.000 0.00 0.00 0.00 4.79
346 347 3.003173 TGCAGAGGACGAAGGGGG 61.003 66.667 0.00 0.00 0.00 5.40
362 363 1.177401 GGGGGACAGAAGATTTGTGC 58.823 55.000 0.00 0.00 36.31 4.57
363 364 0.804989 GGGGACAGAAGATTTGTGCG 59.195 55.000 0.00 0.00 37.71 5.34
364 365 0.804989 GGGACAGAAGATTTGTGCGG 59.195 55.000 0.00 0.00 37.71 5.69
365 366 0.804989 GGACAGAAGATTTGTGCGGG 59.195 55.000 0.00 0.00 0.00 6.13
366 367 1.610624 GGACAGAAGATTTGTGCGGGA 60.611 52.381 0.00 0.00 0.00 5.14
367 368 2.359900 GACAGAAGATTTGTGCGGGAT 58.640 47.619 0.00 0.00 0.00 3.85
368 369 2.352960 GACAGAAGATTTGTGCGGGATC 59.647 50.000 0.00 0.00 0.00 3.36
369 370 1.328680 CAGAAGATTTGTGCGGGATCG 59.671 52.381 0.00 0.00 39.81 3.69
379 380 4.752879 CGGGATCGCACGGTTGGT 62.753 66.667 10.70 0.00 37.25 3.67
380 381 2.818274 GGGATCGCACGGTTGGTC 60.818 66.667 4.64 0.00 0.00 4.02
381 382 2.047655 GGATCGCACGGTTGGTCA 60.048 61.111 0.00 0.00 0.00 4.02
382 383 2.388232 GGATCGCACGGTTGGTCAC 61.388 63.158 0.00 0.00 0.00 3.67
383 384 2.726691 GATCGCACGGTTGGTCACG 61.727 63.158 0.00 0.00 0.00 4.35
386 387 4.307908 GCACGGTTGGTCACGCAC 62.308 66.667 0.00 0.00 0.00 5.34
387 388 2.892914 CACGGTTGGTCACGCACA 60.893 61.111 0.00 0.00 0.00 4.57
388 389 2.110213 ACGGTTGGTCACGCACAT 59.890 55.556 0.00 0.00 0.00 3.21
389 390 0.946700 CACGGTTGGTCACGCACATA 60.947 55.000 0.00 0.00 0.00 2.29
390 391 0.036765 ACGGTTGGTCACGCACATAT 60.037 50.000 0.00 0.00 0.00 1.78
391 392 0.650512 CGGTTGGTCACGCACATATC 59.349 55.000 0.00 0.00 0.00 1.63
392 393 0.650512 GGTTGGTCACGCACATATCG 59.349 55.000 0.00 0.00 0.00 2.92
393 394 0.650512 GTTGGTCACGCACATATCGG 59.349 55.000 0.00 0.00 0.00 4.18
394 395 0.461163 TTGGTCACGCACATATCGGG 60.461 55.000 0.00 0.00 0.00 5.14
395 396 2.244651 GGTCACGCACATATCGGGC 61.245 63.158 0.00 0.00 0.00 6.13
399 400 4.969196 CGCACATATCGGGCGGCT 62.969 66.667 9.56 0.00 46.46 5.52
400 401 2.342279 GCACATATCGGGCGGCTA 59.658 61.111 9.56 0.00 0.00 3.93
401 402 1.738099 GCACATATCGGGCGGCTAG 60.738 63.158 9.56 3.55 0.00 3.42
411 412 2.126812 GCGGCTAGCGATAGACCG 60.127 66.667 27.65 27.65 46.50 4.79
412 413 2.561885 CGGCTAGCGATAGACCGG 59.438 66.667 25.66 0.00 40.18 5.28
413 414 2.258897 GGCTAGCGATAGACCGGC 59.741 66.667 12.82 0.00 39.76 6.13
414 415 2.258897 GCTAGCGATAGACCGGCC 59.741 66.667 12.82 0.00 39.76 6.13
415 416 2.561885 CTAGCGATAGACCGGCCG 59.438 66.667 21.04 21.04 39.76 6.13
416 417 1.964891 CTAGCGATAGACCGGCCGA 60.965 63.158 30.73 6.75 39.76 5.54
417 418 1.512996 CTAGCGATAGACCGGCCGAA 61.513 60.000 30.73 9.55 39.76 4.30
418 419 1.102809 TAGCGATAGACCGGCCGAAA 61.103 55.000 30.73 9.13 39.76 3.46
419 420 1.949631 GCGATAGACCGGCCGAAAG 60.950 63.158 30.73 13.32 39.76 2.62
420 421 1.436336 CGATAGACCGGCCGAAAGT 59.564 57.895 30.73 17.20 39.76 2.66
421 422 0.179119 CGATAGACCGGCCGAAAGTT 60.179 55.000 30.73 8.32 39.76 2.66
422 423 1.287425 GATAGACCGGCCGAAAGTTG 58.713 55.000 30.73 11.56 0.00 3.16
423 424 0.107848 ATAGACCGGCCGAAAGTTGG 60.108 55.000 30.73 10.69 0.00 3.77
424 425 2.175035 TAGACCGGCCGAAAGTTGGG 62.175 60.000 30.73 9.82 0.00 4.12
429 430 4.056125 GCCGAAAGTTGGGCTGGC 62.056 66.667 9.59 0.00 46.97 4.85
430 431 3.737172 CCGAAAGTTGGGCTGGCG 61.737 66.667 0.00 0.00 0.00 5.69
431 432 4.404654 CGAAAGTTGGGCTGGCGC 62.405 66.667 0.00 0.00 0.00 6.53
432 433 3.294493 GAAAGTTGGGCTGGCGCA 61.294 61.111 10.83 8.22 38.10 6.09
433 434 3.558099 GAAAGTTGGGCTGGCGCAC 62.558 63.158 10.83 0.00 40.99 5.34
446 447 4.880537 CGCACGGGAGCCTAGCAG 62.881 72.222 0.00 0.00 0.00 4.24
447 448 3.775654 GCACGGGAGCCTAGCAGT 61.776 66.667 0.00 0.00 0.00 4.40
448 449 2.423898 GCACGGGAGCCTAGCAGTA 61.424 63.158 0.00 0.00 0.00 2.74
449 450 1.749334 GCACGGGAGCCTAGCAGTAT 61.749 60.000 0.00 0.00 0.00 2.12
450 451 1.617322 CACGGGAGCCTAGCAGTATA 58.383 55.000 0.00 0.00 0.00 1.47
451 452 1.542030 CACGGGAGCCTAGCAGTATAG 59.458 57.143 0.00 0.00 0.00 1.31
452 453 1.145325 ACGGGAGCCTAGCAGTATAGT 59.855 52.381 0.00 0.00 0.00 2.12
453 454 2.374504 ACGGGAGCCTAGCAGTATAGTA 59.625 50.000 0.00 0.00 0.00 1.82
454 455 3.011119 CGGGAGCCTAGCAGTATAGTAG 58.989 54.545 0.00 0.00 0.00 2.57
455 456 3.358118 GGGAGCCTAGCAGTATAGTAGG 58.642 54.545 0.00 0.00 37.05 3.18
456 457 3.358118 GGAGCCTAGCAGTATAGTAGGG 58.642 54.545 0.00 0.00 34.88 3.53
457 458 3.245336 GGAGCCTAGCAGTATAGTAGGGT 60.245 52.174 0.00 0.00 45.31 4.34
458 459 4.018597 GGAGCCTAGCAGTATAGTAGGGTA 60.019 50.000 0.00 0.00 43.22 3.69
459 460 5.182169 AGCCTAGCAGTATAGTAGGGTAG 57.818 47.826 0.00 0.00 41.76 3.18
460 461 4.850963 AGCCTAGCAGTATAGTAGGGTAGA 59.149 45.833 0.00 0.00 41.76 2.59
461 462 5.493250 AGCCTAGCAGTATAGTAGGGTAGAT 59.507 44.000 0.00 0.00 41.76 1.98
462 463 6.011451 AGCCTAGCAGTATAGTAGGGTAGATT 60.011 42.308 0.00 0.00 41.76 2.40
463 464 6.095720 GCCTAGCAGTATAGTAGGGTAGATTG 59.904 46.154 0.00 0.00 34.88 2.67
464 465 7.403671 CCTAGCAGTATAGTAGGGTAGATTGA 58.596 42.308 0.00 0.00 34.22 2.57
465 466 7.337436 CCTAGCAGTATAGTAGGGTAGATTGAC 59.663 44.444 0.00 0.00 34.22 3.18
466 467 6.854578 AGCAGTATAGTAGGGTAGATTGACT 58.145 40.000 0.00 0.00 0.00 3.41
467 468 7.986704 AGCAGTATAGTAGGGTAGATTGACTA 58.013 38.462 0.00 0.00 0.00 2.59
468 469 8.104566 AGCAGTATAGTAGGGTAGATTGACTAG 58.895 40.741 0.00 0.00 0.00 2.57
469 470 7.884354 GCAGTATAGTAGGGTAGATTGACTAGT 59.116 40.741 0.00 0.00 0.00 2.57
472 473 9.382275 GTATAGTAGGGTAGATTGACTAGTAGC 57.618 40.741 0.00 0.00 0.00 3.58
473 474 6.263412 AGTAGGGTAGATTGACTAGTAGCA 57.737 41.667 0.00 0.00 0.00 3.49
474 475 6.063404 AGTAGGGTAGATTGACTAGTAGCAC 58.937 44.000 0.00 0.00 0.00 4.40
475 476 4.216708 AGGGTAGATTGACTAGTAGCACC 58.783 47.826 0.00 0.00 0.00 5.01
476 477 3.958798 GGGTAGATTGACTAGTAGCACCA 59.041 47.826 0.00 0.00 0.00 4.17
477 478 4.202131 GGGTAGATTGACTAGTAGCACCAC 60.202 50.000 0.00 0.00 0.00 4.16
478 479 4.401519 GGTAGATTGACTAGTAGCACCACA 59.598 45.833 0.00 0.00 0.00 4.17
479 480 4.727507 AGATTGACTAGTAGCACCACAG 57.272 45.455 0.00 0.00 0.00 3.66
480 481 4.090090 AGATTGACTAGTAGCACCACAGT 58.910 43.478 0.00 0.00 0.00 3.55
531 532 5.704978 AGAAAAAGACTTTGGAGAGAGATGC 59.295 40.000 0.06 0.00 0.00 3.91
532 533 4.630644 AAAGACTTTGGAGAGAGATGCA 57.369 40.909 0.00 0.00 0.00 3.96
533 534 3.608316 AGACTTTGGAGAGAGATGCAC 57.392 47.619 0.00 0.00 0.00 4.57
534 535 2.094286 AGACTTTGGAGAGAGATGCACG 60.094 50.000 0.00 0.00 0.00 5.34
537 538 3.258372 ACTTTGGAGAGAGATGCACGTAA 59.742 43.478 0.00 0.00 0.00 3.18
548 549 3.699538 AGATGCACGTAACCATCTGTCTA 59.300 43.478 18.89 0.00 44.68 2.59
565 570 5.531287 TCTGTCTAAAAGTTTGAGGAAAGGC 59.469 40.000 0.00 0.00 0.00 4.35
588 593 1.456544 GTCGGTGCGTCGTAAAAATCA 59.543 47.619 0.00 0.00 0.00 2.57
592 597 1.463444 GTGCGTCGTAAAAATCAGCCT 59.537 47.619 0.00 0.00 0.00 4.58
593 598 2.095919 GTGCGTCGTAAAAATCAGCCTT 60.096 45.455 0.00 0.00 0.00 4.35
595 600 2.783316 GCGTCGTAAAAATCAGCCTTCG 60.783 50.000 0.00 0.00 0.00 3.79
598 606 3.430895 GTCGTAAAAATCAGCCTTCGTCA 59.569 43.478 0.00 0.00 0.00 4.35
600 608 4.084223 TCGTAAAAATCAGCCTTCGTCAAC 60.084 41.667 0.00 0.00 0.00 3.18
714 727 2.645567 CACCCGGATCCGATCTCG 59.354 66.667 35.42 17.59 42.83 4.04
743 772 2.126307 CGTGTGCTGGACGGAGAG 60.126 66.667 0.00 0.00 33.08 3.20
889 925 2.031516 CAGTTCGGCAGCTCACCAG 61.032 63.158 3.29 0.00 0.00 4.00
893 929 2.031012 CGGCAGCTCACCAGACAA 59.969 61.111 3.29 0.00 0.00 3.18
894 930 1.597854 CGGCAGCTCACCAGACAAA 60.598 57.895 3.29 0.00 0.00 2.83
896 932 0.819259 GGCAGCTCACCAGACAAACA 60.819 55.000 0.00 0.00 0.00 2.83
901 937 3.567164 CAGCTCACCAGACAAACATTCTT 59.433 43.478 0.00 0.00 0.00 2.52
903 939 3.057946 GCTCACCAGACAAACATTCTTCC 60.058 47.826 0.00 0.00 0.00 3.46
904 940 4.392940 CTCACCAGACAAACATTCTTCCT 58.607 43.478 0.00 0.00 0.00 3.36
905 941 4.389374 TCACCAGACAAACATTCTTCCTC 58.611 43.478 0.00 0.00 0.00 3.71
908 944 3.084786 CAGACAAACATTCTTCCTCCCC 58.915 50.000 0.00 0.00 0.00 4.81
957 998 4.445545 CGCCGCGGCAAAGAAGAC 62.446 66.667 45.26 16.94 42.06 3.01
960 1001 2.258013 CCGCGGCAAAGAAGACCAA 61.258 57.895 14.67 0.00 0.00 3.67
961 1002 1.207593 CGCGGCAAAGAAGACCAAG 59.792 57.895 0.00 0.00 0.00 3.61
964 1005 1.866853 CGGCAAAGAAGACCAAGCCC 61.867 60.000 0.00 0.00 38.90 5.19
965 1006 0.827507 GGCAAAGAAGACCAAGCCCA 60.828 55.000 0.00 0.00 36.17 5.36
967 1008 0.961753 CAAAGAAGACCAAGCCCACC 59.038 55.000 0.00 0.00 0.00 4.61
969 1010 2.359975 GAAGACCAAGCCCACCGG 60.360 66.667 0.00 0.00 0.00 5.28
970 1011 2.852075 AAGACCAAGCCCACCGGA 60.852 61.111 9.46 0.00 0.00 5.14
971 1012 2.804828 GAAGACCAAGCCCACCGGAG 62.805 65.000 9.46 0.00 0.00 4.63
983 1024 4.489771 CCGGAGGCCGCAATCCTT 62.490 66.667 9.31 0.00 46.86 3.36
984 1025 2.897350 CGGAGGCCGCAATCCTTC 60.897 66.667 9.31 0.00 41.17 3.46
985 1026 2.517166 GGAGGCCGCAATCCTTCC 60.517 66.667 9.31 0.00 33.24 3.46
986 1027 2.517166 GAGGCCGCAATCCTTCCC 60.517 66.667 0.00 0.00 33.24 3.97
987 1028 4.489771 AGGCCGCAATCCTTCCCG 62.490 66.667 0.00 0.00 0.00 5.14
988 1029 4.796495 GGCCGCAATCCTTCCCGT 62.796 66.667 0.00 0.00 0.00 5.28
989 1030 2.750237 GCCGCAATCCTTCCCGTT 60.750 61.111 0.00 0.00 0.00 4.44
990 1031 2.761195 GCCGCAATCCTTCCCGTTC 61.761 63.158 0.00 0.00 0.00 3.95
991 1032 2.112815 CCGCAATCCTTCCCGTTCC 61.113 63.158 0.00 0.00 0.00 3.62
992 1033 1.376683 CGCAATCCTTCCCGTTCCA 60.377 57.895 0.00 0.00 0.00 3.53
993 1034 1.644786 CGCAATCCTTCCCGTTCCAC 61.645 60.000 0.00 0.00 0.00 4.02
994 1035 0.322546 GCAATCCTTCCCGTTCCACT 60.323 55.000 0.00 0.00 0.00 4.00
995 1036 1.739067 CAATCCTTCCCGTTCCACTC 58.261 55.000 0.00 0.00 0.00 3.51
1323 1367 1.588139 CGACAGCGGATTCGGTACC 60.588 63.158 0.16 0.16 46.01 3.34
1370 1418 4.574828 AGTTTTGCTTCTTCTGCTCGTTTA 59.425 37.500 0.00 0.00 0.00 2.01
1436 1655 5.575957 AGTGCATTTCTGAATTAGAATGCG 58.424 37.500 15.36 0.00 44.54 4.73
1439 1658 4.736793 GCATTTCTGAATTAGAATGCGTGG 59.263 41.667 7.90 0.00 44.54 4.94
1493 1715 6.647212 TGAGATTAGCAATTACACACTTCG 57.353 37.500 0.00 0.00 0.00 3.79
1545 1767 3.944650 TCATTCACATTGACCGGGTTATG 59.055 43.478 6.32 16.92 0.00 1.90
1572 1794 4.883083 TCAACTATTCGCACTGAGACTTT 58.117 39.130 0.00 0.00 0.00 2.66
1620 1842 4.115516 ACACTGATAGCATTAGCAACTCG 58.884 43.478 0.00 0.00 45.49 4.18
1626 1848 1.734465 AGCATTAGCAACTCGAAGCAC 59.266 47.619 6.89 0.00 45.49 4.40
1648 1870 7.337942 AGCACTTCTCAGAATAAAATTGGTAGG 59.662 37.037 0.00 0.00 0.00 3.18
1788 2011 4.824479 ATAAAATTCAAGGCAACCCTGG 57.176 40.909 0.00 0.00 41.90 4.45
1862 2085 5.187967 ACAGAAACTAGTGATCCCAAGTAGG 59.812 44.000 0.00 0.00 37.03 3.18
1910 2133 5.460091 ACAGAAAAATGAAGAAGAAAAGCGC 59.540 36.000 0.00 0.00 0.00 5.92
1940 2164 7.191593 TCCTGAATTACCTTTACTTACTCCC 57.808 40.000 0.00 0.00 0.00 4.30
1953 2177 2.738587 TACTCCCTGCTCACTAGAGG 57.261 55.000 0.00 0.00 42.33 3.69
1954 2178 1.003646 ACTCCCTGCTCACTAGAGGA 58.996 55.000 0.00 0.00 42.33 3.71
1959 2183 3.261897 TCCCTGCTCACTAGAGGAAAAAG 59.738 47.826 0.00 0.00 41.98 2.27
1964 2188 6.174720 TGCTCACTAGAGGAAAAAGAAGAA 57.825 37.500 0.00 0.00 39.45 2.52
1970 2194 9.853177 TCACTAGAGGAAAAAGAAGAAGAAAAT 57.147 29.630 0.00 0.00 0.00 1.82
2083 2309 6.723298 AGAGTTTAGACATCTCCCTGTATG 57.277 41.667 0.00 0.00 0.00 2.39
2084 2310 6.198639 AGAGTTTAGACATCTCCCTGTATGT 58.801 40.000 0.00 0.00 39.00 2.29
2138 2364 1.825622 GCCACAGATTAGCCTGCCC 60.826 63.158 0.00 0.00 37.68 5.36
2197 2431 3.440522 GGCACCTTCAGTTAGACATTTCC 59.559 47.826 0.00 0.00 0.00 3.13
2200 2434 4.697352 CACCTTCAGTTAGACATTTCCCTG 59.303 45.833 0.00 0.00 0.00 4.45
2245 2479 2.451490 TCTTGTCCTTTGTGCCACAAA 58.549 42.857 20.90 20.90 44.91 2.83
2328 2562 2.112998 CATGCCTCCAATGGGATTGTT 58.887 47.619 0.00 0.00 43.91 2.83
2458 2692 7.815840 TCTCAACAAGATAACATGTTTTGGA 57.184 32.000 17.78 10.05 36.09 3.53
2459 2693 8.408043 TCTCAACAAGATAACATGTTTTGGAT 57.592 30.769 17.78 3.60 36.09 3.41
2463 2697 8.702438 CAACAAGATAACATGTTTTGGATGTTC 58.298 33.333 17.78 2.14 41.94 3.18
2468 2702 4.871933 ACATGTTTTGGATGTTCCTTCC 57.128 40.909 0.00 0.00 37.46 3.46
2471 2705 2.621055 TGTTTTGGATGTTCCTTCCGTG 59.379 45.455 0.00 0.00 37.46 4.94
2499 2752 2.376695 TCCCCGGTCTAGGACAATAG 57.623 55.000 0.00 0.00 33.68 1.73
2501 2754 1.339097 CCCGGTCTAGGACAATAGGG 58.661 60.000 0.00 3.48 33.68 3.53
2541 2806 7.263496 TCCTAGCATCGATAAGATTCATCATG 58.737 38.462 0.00 0.00 37.52 3.07
2555 2820 9.788889 AAGATTCATCATGTGCAATATCTTCTA 57.211 29.630 0.00 0.00 0.00 2.10
2560 2825 9.563748 TCATCATGTGCAATATCTTCTATGAAA 57.436 29.630 0.00 0.00 0.00 2.69
2601 2866 7.522374 GCTAGTTATGCCAGATTATTAACTGC 58.478 38.462 0.00 0.00 33.40 4.40
2604 2869 7.934457 AGTTATGCCAGATTATTAACTGCAAG 58.066 34.615 0.00 0.00 42.29 4.01
2919 3187 6.980978 CACTTCTATCCTAGCGAAAGAAATCA 59.019 38.462 0.00 0.00 0.00 2.57
2925 3193 5.844004 TCCTAGCGAAAGAAATCATCCTAC 58.156 41.667 0.00 0.00 0.00 3.18
2951 3223 5.048224 GCTAGTACACTTGAGTTCCTGTGTA 60.048 44.000 0.00 0.00 42.61 2.90
2962 3234 5.408299 TGAGTTCCTGTGTAAAACATGATCG 59.592 40.000 0.00 0.00 38.39 3.69
2966 3238 7.442969 AGTTCCTGTGTAAAACATGATCGTAAA 59.557 33.333 0.00 0.00 38.39 2.01
2968 3240 8.330466 TCCTGTGTAAAACATGATCGTAAAAT 57.670 30.769 0.00 0.00 38.39 1.82
2969 3241 8.788806 TCCTGTGTAAAACATGATCGTAAAATT 58.211 29.630 0.00 0.00 38.39 1.82
2970 3242 9.061610 CCTGTGTAAAACATGATCGTAAAATTC 57.938 33.333 0.00 0.00 38.39 2.17
2971 3243 9.605955 CTGTGTAAAACATGATCGTAAAATTCA 57.394 29.630 0.00 0.00 38.39 2.57
2984 3257 6.781138 TCGTAAAATTCATGTCACATAAGCC 58.219 36.000 0.00 0.00 0.00 4.35
2985 3258 5.676744 CGTAAAATTCATGTCACATAAGCCG 59.323 40.000 0.00 0.00 0.00 5.52
2990 3263 4.209307 TCATGTCACATAAGCCGGTTAA 57.791 40.909 1.90 0.00 0.00 2.01
2998 3271 7.337184 TGTCACATAAGCCGGTTAATATTTCAA 59.663 33.333 1.90 0.00 0.00 2.69
3000 3273 8.349245 TCACATAAGCCGGTTAATATTTCAATG 58.651 33.333 1.90 0.00 0.00 2.82
3022 3295 6.012658 TGAAAATGAGTTCATTGTAGTGCC 57.987 37.500 8.04 0.00 45.06 5.01
3024 3297 6.209192 TGAAAATGAGTTCATTGTAGTGCCAT 59.791 34.615 8.04 0.00 45.06 4.40
3099 3373 0.899720 TCGGCGGTCCTAAAGATGTT 59.100 50.000 7.21 0.00 0.00 2.71
3117 3391 1.059584 TTGGGGAAGTGGTGCTGAGA 61.060 55.000 0.00 0.00 0.00 3.27
3135 3409 3.074412 GAGAAGGATCGCAAGGACAAAA 58.926 45.455 0.00 0.00 38.47 2.44
3138 3412 0.168128 GGATCGCAAGGACAAAACGG 59.832 55.000 0.00 0.00 38.47 4.44
3144 3418 1.394618 CAAGGACAAAACGGAACCCA 58.605 50.000 0.00 0.00 0.00 4.51
3147 3421 1.423921 AGGACAAAACGGAACCCAGAT 59.576 47.619 0.00 0.00 0.00 2.90
3153 3427 4.261801 CAAAACGGAACCCAGATATCAGT 58.738 43.478 5.32 0.00 0.00 3.41
3156 3430 1.414181 CGGAACCCAGATATCAGTGCT 59.586 52.381 5.32 0.00 0.00 4.40
3162 3436 4.148838 ACCCAGATATCAGTGCTACTCTC 58.851 47.826 5.32 0.00 0.00 3.20
3165 3439 5.245751 CCCAGATATCAGTGCTACTCTCATT 59.754 44.000 5.32 0.00 0.00 2.57
3171 3445 3.450096 TCAGTGCTACTCTCATTGATGCT 59.550 43.478 0.00 0.00 0.00 3.79
3240 3514 0.898789 TCCGAGTCGAAAGCCCTTCT 60.899 55.000 15.64 0.00 31.20 2.85
3373 3647 3.780624 GCGGATTCCTTCAGCCTAA 57.219 52.632 0.30 0.00 39.36 2.69
3376 3650 2.498167 CGGATTCCTTCAGCCTAATGG 58.502 52.381 0.30 0.00 0.00 3.16
3378 3652 3.685550 CGGATTCCTTCAGCCTAATGGTT 60.686 47.826 0.30 0.00 35.27 3.67
3429 3703 4.044065 AGTTTTGTATCCATGACCCTTGGA 59.956 41.667 0.00 4.39 46.86 3.53
3430 3704 3.644966 TTGTATCCATGACCCTTGGAC 57.355 47.619 0.00 0.00 45.71 4.02
3431 3705 1.843851 TGTATCCATGACCCTTGGACC 59.156 52.381 0.00 0.00 45.71 4.46
3441 3716 3.245122 TGACCCTTGGACCTTTTATCCAC 60.245 47.826 0.00 0.00 46.09 4.02
3452 3727 7.054751 GGACCTTTTATCCACTAGCTTGTAAT 58.945 38.462 0.00 0.89 36.15 1.89
3455 3730 8.957466 ACCTTTTATCCACTAGCTTGTAATTTC 58.043 33.333 0.00 0.00 0.00 2.17
3459 3734 4.181578 TCCACTAGCTTGTAATTTCGCTC 58.818 43.478 0.00 0.00 34.14 5.03
3460 3735 3.309954 CCACTAGCTTGTAATTTCGCTCC 59.690 47.826 0.00 0.00 34.14 4.70
3461 3736 3.000322 CACTAGCTTGTAATTTCGCTCCG 60.000 47.826 0.00 0.00 34.14 4.63
3476 3751 1.339727 GCTCCGGTAGGTCATGGTTTT 60.340 52.381 0.00 0.00 39.05 2.43
3477 3752 2.093341 GCTCCGGTAGGTCATGGTTTTA 60.093 50.000 0.00 0.00 39.05 1.52
3485 3760 5.889289 GGTAGGTCATGGTTTTATTTAGCCA 59.111 40.000 0.00 0.00 35.28 4.75
3492 3767 5.975693 TGGTTTTATTTAGCCAAGGAGTG 57.024 39.130 0.00 0.00 0.00 3.51
3540 3838 5.569355 TGTATCCATGTTCTTGGTGACATT 58.431 37.500 0.00 0.00 42.32 2.71
3565 3863 9.663904 TTCATGTCTGAAGTTTTCTTTTTATCG 57.336 29.630 0.00 0.00 40.61 2.92
3566 3864 8.836413 TCATGTCTGAAGTTTTCTTTTTATCGT 58.164 29.630 0.00 0.00 40.61 3.73
3576 3874 9.458374 AGTTTTCTTTTTATCGTAATGTGTTGG 57.542 29.630 0.00 0.00 0.00 3.77
3577 3875 8.696175 GTTTTCTTTTTATCGTAATGTGTTGGG 58.304 33.333 0.00 0.00 0.00 4.12
3578 3876 7.513371 TTCTTTTTATCGTAATGTGTTGGGT 57.487 32.000 0.00 0.00 0.00 4.51
3579 3877 6.904498 TCTTTTTATCGTAATGTGTTGGGTG 58.096 36.000 0.00 0.00 0.00 4.61
3580 3878 6.487331 TCTTTTTATCGTAATGTGTTGGGTGT 59.513 34.615 0.00 0.00 0.00 4.16
3581 3879 5.866335 TTTATCGTAATGTGTTGGGTGTC 57.134 39.130 0.00 0.00 0.00 3.67
3596 3894 3.020984 GGGTGTCAAGGTTTTGTCAAGA 58.979 45.455 0.00 0.00 34.86 3.02
3597 3895 3.636764 GGGTGTCAAGGTTTTGTCAAGAT 59.363 43.478 0.00 0.00 34.86 2.40
3598 3896 4.261614 GGGTGTCAAGGTTTTGTCAAGATC 60.262 45.833 0.00 0.00 34.86 2.75
3600 3898 5.163561 GGTGTCAAGGTTTTGTCAAGATCAA 60.164 40.000 0.00 0.00 34.86 2.57
3608 3906 8.242729 AGGTTTTGTCAAGATCAAGAGAAATT 57.757 30.769 9.48 0.09 28.90 1.82
3609 3907 8.699130 AGGTTTTGTCAAGATCAAGAGAAATTT 58.301 29.630 9.48 0.00 28.90 1.82
3649 3947 9.225201 CTGCATCATAATATTGTTGTTACACAC 57.775 33.333 0.00 0.00 32.98 3.82
3662 3960 9.945904 TTGTTGTTACACACATATATGGACTTA 57.054 29.630 16.96 0.77 34.43 2.24
3679 3977 5.763204 TGGACTTATTGTTTGGACAGAGAAC 59.237 40.000 0.00 0.00 37.04 3.01
3680 3978 5.763204 GGACTTATTGTTTGGACAGAGAACA 59.237 40.000 0.00 0.00 37.04 3.18
3699 3997 9.149225 AGAGAACATATTCTTATTCGATGATGC 57.851 33.333 0.00 0.00 45.60 3.91
3700 3998 9.149225 GAGAACATATTCTTATTCGATGATGCT 57.851 33.333 0.00 0.00 45.60 3.79
3701 3999 8.933807 AGAACATATTCTTATTCGATGATGCTG 58.066 33.333 0.00 0.00 42.91 4.41
3702 4000 7.069852 ACATATTCTTATTCGATGATGCTGC 57.930 36.000 0.00 0.00 0.00 5.25
3704 4002 2.407090 TCTTATTCGATGATGCTGCGG 58.593 47.619 0.00 0.00 0.00 5.69
3705 4003 2.138320 CTTATTCGATGATGCTGCGGT 58.862 47.619 0.00 0.00 0.00 5.68
3706 4004 2.238942 TATTCGATGATGCTGCGGTT 57.761 45.000 0.00 0.00 0.00 4.44
3707 4005 1.382522 ATTCGATGATGCTGCGGTTT 58.617 45.000 0.00 0.00 0.00 3.27
3708 4006 0.447406 TTCGATGATGCTGCGGTTTG 59.553 50.000 0.00 0.00 0.00 2.93
3709 4007 0.390998 TCGATGATGCTGCGGTTTGA 60.391 50.000 0.00 0.00 0.00 2.69
3710 4008 0.447406 CGATGATGCTGCGGTTTGAA 59.553 50.000 0.00 0.00 0.00 2.69
3711 4009 1.791555 CGATGATGCTGCGGTTTGAAC 60.792 52.381 0.00 0.00 0.00 3.18
3712 4010 1.470098 GATGATGCTGCGGTTTGAACT 59.530 47.619 0.00 0.00 0.00 3.01
3713 4011 1.317613 TGATGCTGCGGTTTGAACTT 58.682 45.000 0.00 0.00 0.00 2.66
3714 4012 1.680735 TGATGCTGCGGTTTGAACTTT 59.319 42.857 0.00 0.00 0.00 2.66
3715 4013 2.100584 TGATGCTGCGGTTTGAACTTTT 59.899 40.909 0.00 0.00 0.00 2.27
3718 4016 3.440228 TGCTGCGGTTTGAACTTTTAAC 58.560 40.909 0.00 0.00 0.00 2.01
3721 4019 4.425520 CTGCGGTTTGAACTTTTAACCAA 58.574 39.130 0.00 0.00 41.06 3.67
3730 4028 9.366216 GTTTGAACTTTTAACCAAACATCTCTT 57.634 29.630 0.00 0.00 44.42 2.85
3733 4031 8.912988 TGAACTTTTAACCAAACATCTCTTGAT 58.087 29.630 0.00 0.00 0.00 2.57
3739 4037 8.924511 TTAACCAAACATCTCTTGATTTCTCT 57.075 30.769 0.00 0.00 0.00 3.10
3789 4087 3.911661 ACTGAAGATGAAGTTTGCTGC 57.088 42.857 0.00 0.00 0.00 5.25
3791 4089 3.252701 ACTGAAGATGAAGTTTGCTGCTG 59.747 43.478 0.00 0.00 0.00 4.41
3792 4090 3.479489 TGAAGATGAAGTTTGCTGCTGA 58.521 40.909 0.00 0.00 0.00 4.26
3793 4091 4.077108 TGAAGATGAAGTTTGCTGCTGAT 58.923 39.130 0.00 0.00 0.00 2.90
3794 4092 4.521639 TGAAGATGAAGTTTGCTGCTGATT 59.478 37.500 0.00 0.00 0.00 2.57
3795 4093 4.698583 AGATGAAGTTTGCTGCTGATTC 57.301 40.909 0.00 1.22 0.00 2.52
3797 4095 3.909776 TGAAGTTTGCTGCTGATTCAG 57.090 42.857 9.40 9.40 37.15 3.02
3961 4264 3.210528 GACGTCCTCCTCGGCGAT 61.211 66.667 11.27 0.00 36.55 4.58
3964 4267 2.556459 CGTCCTCCTCGGCGATGAT 61.556 63.158 11.27 0.00 35.30 2.45
4004 4307 1.748122 GTACCTCTCCGCCGTGAGA 60.748 63.158 5.81 5.71 39.04 3.27
4239 6043 3.776340 TGCGCAAACTGTAATATCGAGA 58.224 40.909 8.16 0.00 0.00 4.04
4240 6044 3.550275 TGCGCAAACTGTAATATCGAGAC 59.450 43.478 8.16 0.00 0.00 3.36
4241 6045 3.550275 GCGCAAACTGTAATATCGAGACA 59.450 43.478 0.30 0.00 0.00 3.41
4242 6046 4.209288 GCGCAAACTGTAATATCGAGACAT 59.791 41.667 0.30 0.00 0.00 3.06
4243 6047 5.610552 GCGCAAACTGTAATATCGAGACATC 60.611 44.000 0.30 0.00 0.00 3.06
4270 6074 1.467342 GTTAGGTTCGTTCATGGTGGC 59.533 52.381 0.00 0.00 0.00 5.01
4272 6076 1.964373 GGTTCGTTCATGGTGGCGT 60.964 57.895 0.00 0.00 0.00 5.68
4273 6077 1.206578 GTTCGTTCATGGTGGCGTG 59.793 57.895 0.00 0.00 0.00 5.34
4294 6101 3.311110 GTGTGGGTCGAGAGGGCA 61.311 66.667 0.00 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.592400 CCATGCACTGCTGGTTCCAG 61.592 60.000 13.88 13.88 37.15 3.86
2 3 1.604308 CCATGCACTGCTGGTTCCA 60.604 57.895 1.98 0.00 0.00 3.53
3 4 1.303561 TCCATGCACTGCTGGTTCC 60.304 57.895 15.16 0.00 34.03 3.62
4 5 1.930908 GCTCCATGCACTGCTGGTTC 61.931 60.000 15.16 7.92 42.31 3.62
5 6 1.975407 GCTCCATGCACTGCTGGTT 60.975 57.895 15.16 0.00 42.31 3.67
8 9 1.426816 CGTAGCTCCATGCACTGCTG 61.427 60.000 12.76 0.00 45.94 4.41
9 10 1.153489 CGTAGCTCCATGCACTGCT 60.153 57.895 1.98 9.06 45.94 4.24
10 11 1.153568 TCGTAGCTCCATGCACTGC 60.154 57.895 0.00 0.00 45.94 4.40
11 12 0.807667 GGTCGTAGCTCCATGCACTG 60.808 60.000 0.00 0.00 45.94 3.66
12 13 1.517832 GGTCGTAGCTCCATGCACT 59.482 57.895 0.00 0.00 45.94 4.40
13 14 1.878522 CGGTCGTAGCTCCATGCAC 60.879 63.158 0.00 0.00 45.94 4.57
14 15 2.494445 CGGTCGTAGCTCCATGCA 59.506 61.111 0.00 0.00 45.94 3.96
15 16 2.279517 CCGGTCGTAGCTCCATGC 60.280 66.667 0.00 0.00 43.29 4.06
16 17 2.279517 GCCGGTCGTAGCTCCATG 60.280 66.667 1.90 0.00 0.00 3.66
17 18 2.758327 TGCCGGTCGTAGCTCCAT 60.758 61.111 1.90 0.00 0.00 3.41
18 19 3.449227 CTGCCGGTCGTAGCTCCA 61.449 66.667 1.90 0.00 0.00 3.86
19 20 3.127352 CTCTGCCGGTCGTAGCTCC 62.127 68.421 1.90 0.00 0.00 4.70
20 21 2.409651 CTCTGCCGGTCGTAGCTC 59.590 66.667 1.90 0.00 0.00 4.09
21 22 3.141488 CCTCTGCCGGTCGTAGCT 61.141 66.667 1.90 0.00 0.00 3.32
22 23 3.450115 ACCTCTGCCGGTCGTAGC 61.450 66.667 1.90 0.00 29.14 3.58
23 24 1.028330 TACACCTCTGCCGGTCGTAG 61.028 60.000 1.90 0.00 34.29 3.51
24 25 1.002257 TACACCTCTGCCGGTCGTA 60.002 57.895 1.90 0.00 34.29 3.43
25 26 2.282674 TACACCTCTGCCGGTCGT 60.283 61.111 1.90 0.00 34.29 4.34
26 27 2.490217 CTACACCTCTGCCGGTCG 59.510 66.667 1.90 0.00 34.29 4.79
27 28 2.184579 GCTACACCTCTGCCGGTC 59.815 66.667 1.90 0.00 34.29 4.79
28 29 2.283966 AGCTACACCTCTGCCGGT 60.284 61.111 1.90 0.00 37.93 5.28
29 30 2.185350 CAGCTACACCTCTGCCGG 59.815 66.667 0.00 0.00 0.00 6.13
30 31 2.185350 CCAGCTACACCTCTGCCG 59.815 66.667 0.00 0.00 0.00 5.69
31 32 1.965754 CTCCCAGCTACACCTCTGCC 61.966 65.000 0.00 0.00 0.00 4.85
32 33 0.972983 TCTCCCAGCTACACCTCTGC 60.973 60.000 0.00 0.00 0.00 4.26
33 34 1.110442 CTCTCCCAGCTACACCTCTG 58.890 60.000 0.00 0.00 0.00 3.35
34 35 1.003646 TCTCTCCCAGCTACACCTCT 58.996 55.000 0.00 0.00 0.00 3.69
35 36 1.398692 CTCTCTCCCAGCTACACCTC 58.601 60.000 0.00 0.00 0.00 3.85
36 37 0.032615 CCTCTCTCCCAGCTACACCT 60.033 60.000 0.00 0.00 0.00 4.00
37 38 0.324830 ACCTCTCTCCCAGCTACACC 60.325 60.000 0.00 0.00 0.00 4.16
38 39 2.438800 TACCTCTCTCCCAGCTACAC 57.561 55.000 0.00 0.00 0.00 2.90
39 40 3.689872 AATACCTCTCTCCCAGCTACA 57.310 47.619 0.00 0.00 0.00 2.74
40 41 5.119694 CAAAAATACCTCTCTCCCAGCTAC 58.880 45.833 0.00 0.00 0.00 3.58
41 42 4.384208 GCAAAAATACCTCTCTCCCAGCTA 60.384 45.833 0.00 0.00 0.00 3.32
42 43 3.623453 GCAAAAATACCTCTCTCCCAGCT 60.623 47.826 0.00 0.00 0.00 4.24
43 44 2.685388 GCAAAAATACCTCTCTCCCAGC 59.315 50.000 0.00 0.00 0.00 4.85
44 45 3.944015 CAGCAAAAATACCTCTCTCCCAG 59.056 47.826 0.00 0.00 0.00 4.45
45 46 3.308402 CCAGCAAAAATACCTCTCTCCCA 60.308 47.826 0.00 0.00 0.00 4.37
46 47 3.054361 TCCAGCAAAAATACCTCTCTCCC 60.054 47.826 0.00 0.00 0.00 4.30
47 48 4.222124 TCCAGCAAAAATACCTCTCTCC 57.778 45.455 0.00 0.00 0.00 3.71
48 49 4.396478 GGTTCCAGCAAAAATACCTCTCTC 59.604 45.833 0.00 0.00 0.00 3.20
49 50 4.202567 TGGTTCCAGCAAAAATACCTCTCT 60.203 41.667 0.00 0.00 0.00 3.10
50 51 4.079253 TGGTTCCAGCAAAAATACCTCTC 58.921 43.478 0.00 0.00 0.00 3.20
51 52 4.112634 TGGTTCCAGCAAAAATACCTCT 57.887 40.909 0.00 0.00 0.00 3.69
52 53 4.220602 ACATGGTTCCAGCAAAAATACCTC 59.779 41.667 0.00 0.00 0.00 3.85
53 54 4.021192 CACATGGTTCCAGCAAAAATACCT 60.021 41.667 0.00 0.00 0.00 3.08
54 55 4.244862 CACATGGTTCCAGCAAAAATACC 58.755 43.478 0.00 0.00 0.00 2.73
55 56 4.881920 ACACATGGTTCCAGCAAAAATAC 58.118 39.130 0.00 0.00 0.00 1.89
56 57 4.586421 TGACACATGGTTCCAGCAAAAATA 59.414 37.500 0.00 0.00 0.00 1.40
57 58 3.387374 TGACACATGGTTCCAGCAAAAAT 59.613 39.130 0.00 0.00 0.00 1.82
58 59 2.762887 TGACACATGGTTCCAGCAAAAA 59.237 40.909 0.00 0.00 0.00 1.94
59 60 2.382882 TGACACATGGTTCCAGCAAAA 58.617 42.857 0.00 0.00 0.00 2.44
60 61 2.064434 TGACACATGGTTCCAGCAAA 57.936 45.000 0.00 0.00 0.00 3.68
61 62 2.064434 TTGACACATGGTTCCAGCAA 57.936 45.000 0.00 0.00 0.00 3.91
62 63 2.291209 ATTGACACATGGTTCCAGCA 57.709 45.000 0.00 0.00 0.00 4.41
63 64 3.665745 AAATTGACACATGGTTCCAGC 57.334 42.857 0.00 0.00 0.00 4.85
64 65 3.742369 GCAAAATTGACACATGGTTCCAG 59.258 43.478 0.00 0.00 0.00 3.86
65 66 3.387374 AGCAAAATTGACACATGGTTCCA 59.613 39.130 0.00 0.00 0.00 3.53
66 67 3.742369 CAGCAAAATTGACACATGGTTCC 59.258 43.478 0.00 0.00 0.00 3.62
67 68 3.184986 GCAGCAAAATTGACACATGGTTC 59.815 43.478 0.00 0.00 0.00 3.62
68 69 3.132925 GCAGCAAAATTGACACATGGTT 58.867 40.909 0.00 0.00 0.00 3.67
69 70 2.102757 TGCAGCAAAATTGACACATGGT 59.897 40.909 0.00 0.00 0.00 3.55
70 71 2.756829 TGCAGCAAAATTGACACATGG 58.243 42.857 0.00 0.00 0.00 3.66
71 72 3.369756 GGATGCAGCAAAATTGACACATG 59.630 43.478 3.51 0.00 0.00 3.21
72 73 3.592059 GGATGCAGCAAAATTGACACAT 58.408 40.909 3.51 0.00 0.00 3.21
73 74 2.607526 CGGATGCAGCAAAATTGACACA 60.608 45.455 3.51 0.00 0.00 3.72
74 75 1.987770 CGGATGCAGCAAAATTGACAC 59.012 47.619 3.51 0.00 0.00 3.67
75 76 1.067706 CCGGATGCAGCAAAATTGACA 60.068 47.619 3.51 0.00 0.00 3.58
76 77 1.632422 CCGGATGCAGCAAAATTGAC 58.368 50.000 3.51 0.00 0.00 3.18
77 78 0.108709 GCCGGATGCAGCAAAATTGA 60.109 50.000 5.05 0.00 40.77 2.57
78 79 2.375981 GCCGGATGCAGCAAAATTG 58.624 52.632 5.05 0.00 40.77 2.32
79 80 4.917474 GCCGGATGCAGCAAAATT 57.083 50.000 5.05 0.00 40.77 1.82
101 102 1.339610 CATCACCGGTTCCAGCAAAAA 59.660 47.619 2.97 0.00 0.00 1.94
102 103 0.958091 CATCACCGGTTCCAGCAAAA 59.042 50.000 2.97 0.00 0.00 2.44
103 104 0.109532 TCATCACCGGTTCCAGCAAA 59.890 50.000 2.97 0.00 0.00 3.68
104 105 0.321564 CTCATCACCGGTTCCAGCAA 60.322 55.000 2.97 0.00 0.00 3.91
105 106 1.191489 TCTCATCACCGGTTCCAGCA 61.191 55.000 2.97 0.00 0.00 4.41
106 107 0.741221 GTCTCATCACCGGTTCCAGC 60.741 60.000 2.97 0.00 0.00 4.85
107 108 0.108138 GGTCTCATCACCGGTTCCAG 60.108 60.000 2.97 0.00 0.00 3.86
108 109 0.834261 TGGTCTCATCACCGGTTCCA 60.834 55.000 2.97 2.36 39.62 3.53
109 110 0.323629 TTGGTCTCATCACCGGTTCC 59.676 55.000 2.97 0.00 39.62 3.62
110 111 1.270625 TGTTGGTCTCATCACCGGTTC 60.271 52.381 2.97 0.00 39.62 3.62
111 112 0.762418 TGTTGGTCTCATCACCGGTT 59.238 50.000 2.97 0.00 39.62 4.44
112 113 0.034896 GTGTTGGTCTCATCACCGGT 59.965 55.000 0.00 0.00 39.62 5.28
113 114 1.014044 CGTGTTGGTCTCATCACCGG 61.014 60.000 0.00 0.00 39.29 5.28
114 115 0.038618 TCGTGTTGGTCTCATCACCG 60.039 55.000 0.00 0.00 39.29 4.94
115 116 1.798813 GTTCGTGTTGGTCTCATCACC 59.201 52.381 0.00 0.00 39.29 4.02
116 117 2.476619 CTGTTCGTGTTGGTCTCATCAC 59.523 50.000 0.00 0.00 39.16 3.06
117 118 2.547855 CCTGTTCGTGTTGGTCTCATCA 60.548 50.000 0.00 0.00 0.00 3.07
118 119 2.069273 CCTGTTCGTGTTGGTCTCATC 58.931 52.381 0.00 0.00 0.00 2.92
119 120 1.878102 GCCTGTTCGTGTTGGTCTCAT 60.878 52.381 0.00 0.00 0.00 2.90
120 121 0.531974 GCCTGTTCGTGTTGGTCTCA 60.532 55.000 0.00 0.00 0.00 3.27
121 122 0.531974 TGCCTGTTCGTGTTGGTCTC 60.532 55.000 0.00 0.00 0.00 3.36
122 123 0.107410 TTGCCTGTTCGTGTTGGTCT 60.107 50.000 0.00 0.00 0.00 3.85
123 124 0.028902 GTTGCCTGTTCGTGTTGGTC 59.971 55.000 0.00 0.00 0.00 4.02
124 125 0.678366 TGTTGCCTGTTCGTGTTGGT 60.678 50.000 0.00 0.00 0.00 3.67
125 126 0.667993 ATGTTGCCTGTTCGTGTTGG 59.332 50.000 0.00 0.00 0.00 3.77
126 127 1.600164 CCATGTTGCCTGTTCGTGTTG 60.600 52.381 0.00 0.00 0.00 3.33
127 128 0.667993 CCATGTTGCCTGTTCGTGTT 59.332 50.000 0.00 0.00 0.00 3.32
128 129 0.179032 TCCATGTTGCCTGTTCGTGT 60.179 50.000 0.00 0.00 0.00 4.49
129 130 0.518636 CTCCATGTTGCCTGTTCGTG 59.481 55.000 0.00 0.00 0.00 4.35
130 131 0.396435 TCTCCATGTTGCCTGTTCGT 59.604 50.000 0.00 0.00 0.00 3.85
131 132 1.081892 CTCTCCATGTTGCCTGTTCG 58.918 55.000 0.00 0.00 0.00 3.95
132 133 2.191128 ACTCTCCATGTTGCCTGTTC 57.809 50.000 0.00 0.00 0.00 3.18
133 134 2.233271 CAACTCTCCATGTTGCCTGTT 58.767 47.619 0.00 0.00 38.36 3.16
134 135 1.901591 CAACTCTCCATGTTGCCTGT 58.098 50.000 0.00 0.00 38.36 4.00
139 140 1.399440 CGGATGCAACTCTCCATGTTG 59.601 52.381 4.99 0.00 45.23 3.33
140 141 1.679944 CCGGATGCAACTCTCCATGTT 60.680 52.381 0.00 0.00 0.00 2.71
141 142 0.107508 CCGGATGCAACTCTCCATGT 60.108 55.000 0.00 0.00 0.00 3.21
142 143 1.442526 GCCGGATGCAACTCTCCATG 61.443 60.000 5.05 0.00 40.77 3.66
143 144 1.153086 GCCGGATGCAACTCTCCAT 60.153 57.895 5.05 0.00 40.77 3.41
144 145 2.268920 GCCGGATGCAACTCTCCA 59.731 61.111 5.05 0.00 40.77 3.86
153 154 2.878906 CAAAACAAATTGCCGGATGC 57.121 45.000 5.05 0.00 41.77 3.91
180 181 1.583856 CGTCATTCTCGTCCATCAACG 59.416 52.381 0.00 0.00 43.92 4.10
181 182 1.927174 CCGTCATTCTCGTCCATCAAC 59.073 52.381 0.00 0.00 0.00 3.18
182 183 1.134818 CCCGTCATTCTCGTCCATCAA 60.135 52.381 0.00 0.00 0.00 2.57
183 184 0.459899 CCCGTCATTCTCGTCCATCA 59.540 55.000 0.00 0.00 0.00 3.07
184 185 0.249489 CCCCGTCATTCTCGTCCATC 60.249 60.000 0.00 0.00 0.00 3.51
185 186 1.686325 CCCCCGTCATTCTCGTCCAT 61.686 60.000 0.00 0.00 0.00 3.41
186 187 2.355986 CCCCCGTCATTCTCGTCCA 61.356 63.158 0.00 0.00 0.00 4.02
187 188 2.017559 CTCCCCCGTCATTCTCGTCC 62.018 65.000 0.00 0.00 0.00 4.79
188 189 1.437986 CTCCCCCGTCATTCTCGTC 59.562 63.158 0.00 0.00 0.00 4.20
189 190 2.722201 GCTCCCCCGTCATTCTCGT 61.722 63.158 0.00 0.00 0.00 4.18
190 191 2.107141 GCTCCCCCGTCATTCTCG 59.893 66.667 0.00 0.00 0.00 4.04
191 192 1.144936 CAGCTCCCCCGTCATTCTC 59.855 63.158 0.00 0.00 0.00 2.87
192 193 3.036429 GCAGCTCCCCCGTCATTCT 62.036 63.158 0.00 0.00 0.00 2.40
193 194 2.514824 GCAGCTCCCCCGTCATTC 60.515 66.667 0.00 0.00 0.00 2.67
194 195 2.615227 GATGCAGCTCCCCCGTCATT 62.615 60.000 0.00 0.00 0.00 2.57
195 196 3.092511 ATGCAGCTCCCCCGTCAT 61.093 61.111 0.00 0.00 0.00 3.06
196 197 3.785859 GATGCAGCTCCCCCGTCA 61.786 66.667 0.00 0.00 0.00 4.35
197 198 4.899239 CGATGCAGCTCCCCCGTC 62.899 72.222 0.00 0.00 0.00 4.79
199 200 4.899239 GTCGATGCAGCTCCCCCG 62.899 72.222 0.00 0.00 0.00 5.73
200 201 4.554036 GGTCGATGCAGCTCCCCC 62.554 72.222 0.00 0.00 0.00 5.40
201 202 2.543067 AAAGGTCGATGCAGCTCCCC 62.543 60.000 0.00 0.00 0.00 4.81
202 203 1.078143 AAAGGTCGATGCAGCTCCC 60.078 57.895 0.00 0.00 0.00 4.30
203 204 0.674895 ACAAAGGTCGATGCAGCTCC 60.675 55.000 0.00 2.43 0.00 4.70
204 205 1.160137 AACAAAGGTCGATGCAGCTC 58.840 50.000 0.00 0.00 0.00 4.09
205 206 1.609208 AAACAAAGGTCGATGCAGCT 58.391 45.000 0.00 0.00 0.00 4.24
206 207 2.053627 CAAAACAAAGGTCGATGCAGC 58.946 47.619 0.00 0.00 0.00 5.25
207 208 3.624326 TCAAAACAAAGGTCGATGCAG 57.376 42.857 0.00 0.00 0.00 4.41
208 209 3.305267 CCATCAAAACAAAGGTCGATGCA 60.305 43.478 0.00 0.00 31.10 3.96
209 210 3.244976 CCATCAAAACAAAGGTCGATGC 58.755 45.455 0.00 0.00 31.10 3.91
210 211 3.244976 GCCATCAAAACAAAGGTCGATG 58.755 45.455 0.00 0.00 0.00 3.84
211 212 2.095263 CGCCATCAAAACAAAGGTCGAT 60.095 45.455 0.00 0.00 0.00 3.59
212 213 1.265635 CGCCATCAAAACAAAGGTCGA 59.734 47.619 0.00 0.00 0.00 4.20
213 214 1.265635 TCGCCATCAAAACAAAGGTCG 59.734 47.619 0.00 0.00 0.00 4.79
214 215 2.552315 TCTCGCCATCAAAACAAAGGTC 59.448 45.455 0.00 0.00 0.00 3.85
215 216 2.582052 TCTCGCCATCAAAACAAAGGT 58.418 42.857 0.00 0.00 0.00 3.50
216 217 3.855689 ATCTCGCCATCAAAACAAAGG 57.144 42.857 0.00 0.00 0.00 3.11
217 218 5.967674 GTCATATCTCGCCATCAAAACAAAG 59.032 40.000 0.00 0.00 0.00 2.77
218 219 5.447144 CGTCATATCTCGCCATCAAAACAAA 60.447 40.000 0.00 0.00 0.00 2.83
219 220 4.033932 CGTCATATCTCGCCATCAAAACAA 59.966 41.667 0.00 0.00 0.00 2.83
220 221 3.555547 CGTCATATCTCGCCATCAAAACA 59.444 43.478 0.00 0.00 0.00 2.83
221 222 3.059597 CCGTCATATCTCGCCATCAAAAC 60.060 47.826 0.00 0.00 0.00 2.43
222 223 3.130633 CCGTCATATCTCGCCATCAAAA 58.869 45.455 0.00 0.00 0.00 2.44
223 224 2.754472 CCGTCATATCTCGCCATCAAA 58.246 47.619 0.00 0.00 0.00 2.69
224 225 1.605457 GCCGTCATATCTCGCCATCAA 60.605 52.381 0.00 0.00 0.00 2.57
225 226 0.038251 GCCGTCATATCTCGCCATCA 60.038 55.000 0.00 0.00 0.00 3.07
226 227 1.073216 CGCCGTCATATCTCGCCATC 61.073 60.000 0.00 0.00 0.00 3.51
227 228 1.080501 CGCCGTCATATCTCGCCAT 60.081 57.895 0.00 0.00 0.00 4.40
228 229 2.335011 CGCCGTCATATCTCGCCA 59.665 61.111 0.00 0.00 0.00 5.69
229 230 2.430921 CCGCCGTCATATCTCGCC 60.431 66.667 0.00 0.00 0.00 5.54
230 231 2.016704 CACCGCCGTCATATCTCGC 61.017 63.158 0.00 0.00 0.00 5.03
231 232 0.386100 CTCACCGCCGTCATATCTCG 60.386 60.000 0.00 0.00 0.00 4.04
232 233 0.669077 ACTCACCGCCGTCATATCTC 59.331 55.000 0.00 0.00 0.00 2.75
233 234 1.112113 AACTCACCGCCGTCATATCT 58.888 50.000 0.00 0.00 0.00 1.98
234 235 1.209128 CAACTCACCGCCGTCATATC 58.791 55.000 0.00 0.00 0.00 1.63
235 236 0.810031 GCAACTCACCGCCGTCATAT 60.810 55.000 0.00 0.00 0.00 1.78
236 237 1.447140 GCAACTCACCGCCGTCATA 60.447 57.895 0.00 0.00 0.00 2.15
237 238 2.742372 GCAACTCACCGCCGTCAT 60.742 61.111 0.00 0.00 0.00 3.06
238 239 3.741830 TTGCAACTCACCGCCGTCA 62.742 57.895 0.00 0.00 0.00 4.35
239 240 2.970324 TTGCAACTCACCGCCGTC 60.970 61.111 0.00 0.00 0.00 4.79
240 241 3.276846 GTTGCAACTCACCGCCGT 61.277 61.111 22.36 0.00 0.00 5.68
241 242 4.025401 GGTTGCAACTCACCGCCG 62.025 66.667 27.64 0.00 0.00 6.46
242 243 4.025401 CGGTTGCAACTCACCGCC 62.025 66.667 27.64 9.60 38.95 6.13
243 244 4.025401 CCGGTTGCAACTCACCGC 62.025 66.667 27.64 10.08 43.65 5.68
244 245 4.025401 GCCGGTTGCAACTCACCG 62.025 66.667 27.64 22.99 44.50 4.94
245 246 4.025401 CGCCGGTTGCAACTCACC 62.025 66.667 27.64 12.33 41.33 4.02
246 247 2.443957 CTTCGCCGGTTGCAACTCAC 62.444 60.000 27.64 15.97 41.33 3.51
247 248 2.203084 TTCGCCGGTTGCAACTCA 60.203 55.556 27.64 6.02 41.33 3.41
248 249 1.959226 TCTTCGCCGGTTGCAACTC 60.959 57.895 27.64 16.97 41.33 3.01
249 250 2.110213 TCTTCGCCGGTTGCAACT 59.890 55.556 27.64 0.00 41.33 3.16
250 251 2.251371 GTCTTCGCCGGTTGCAAC 59.749 61.111 21.59 21.59 41.33 4.17
251 252 3.342627 CGTCTTCGCCGGTTGCAA 61.343 61.111 1.90 0.00 41.33 4.08
260 261 3.843240 CTTGCTCGCCGTCTTCGC 61.843 66.667 0.00 0.00 35.54 4.70
261 262 1.517257 ATCTTGCTCGCCGTCTTCG 60.517 57.895 0.00 0.00 0.00 3.79
262 263 2.002127 CATCTTGCTCGCCGTCTTC 58.998 57.895 0.00 0.00 0.00 2.87
263 264 2.103042 GCATCTTGCTCGCCGTCTT 61.103 57.895 0.00 0.00 40.96 3.01
264 265 2.510238 GCATCTTGCTCGCCGTCT 60.510 61.111 0.00 0.00 40.96 4.18
265 266 1.911293 TTTGCATCTTGCTCGCCGTC 61.911 55.000 0.75 0.00 45.31 4.79
266 267 1.915614 CTTTGCATCTTGCTCGCCGT 61.916 55.000 0.75 0.00 45.31 5.68
267 268 1.226211 CTTTGCATCTTGCTCGCCG 60.226 57.895 0.75 0.00 45.31 6.46
268 269 1.138247 CCTTTGCATCTTGCTCGCC 59.862 57.895 0.75 0.00 45.31 5.54
269 270 1.515736 GCCTTTGCATCTTGCTCGC 60.516 57.895 0.75 0.00 45.31 5.03
270 271 1.878070 TGCCTTTGCATCTTGCTCG 59.122 52.632 0.75 0.00 45.31 5.03
280 281 2.104253 GCATGCCACATGCCTTTGC 61.104 57.895 19.37 0.00 40.16 3.68
281 282 0.739462 CAGCATGCCACATGCCTTTG 60.739 55.000 24.69 15.07 45.59 2.77
282 283 1.594833 CAGCATGCCACATGCCTTT 59.405 52.632 24.69 7.78 45.59 3.11
283 284 3.294750 CAGCATGCCACATGCCTT 58.705 55.556 24.69 8.44 45.59 4.35
310 311 1.885887 CACATCTTGCGGGGAGAAAAA 59.114 47.619 0.00 0.00 0.00 1.94
311 312 1.533625 CACATCTTGCGGGGAGAAAA 58.466 50.000 0.00 0.00 0.00 2.29
312 313 0.960364 GCACATCTTGCGGGGAGAAA 60.960 55.000 0.00 0.00 42.79 2.52
313 314 1.377202 GCACATCTTGCGGGGAGAA 60.377 57.895 0.00 0.00 42.79 2.87
314 315 2.268920 GCACATCTTGCGGGGAGA 59.731 61.111 0.00 0.00 42.79 3.71
322 323 1.998315 CTTCGTCCTCTGCACATCTTG 59.002 52.381 0.00 0.00 0.00 3.02
323 324 1.066573 CCTTCGTCCTCTGCACATCTT 60.067 52.381 0.00 0.00 0.00 2.40
324 325 0.534412 CCTTCGTCCTCTGCACATCT 59.466 55.000 0.00 0.00 0.00 2.90
325 326 0.460987 CCCTTCGTCCTCTGCACATC 60.461 60.000 0.00 0.00 0.00 3.06
326 327 1.599047 CCCTTCGTCCTCTGCACAT 59.401 57.895 0.00 0.00 0.00 3.21
327 328 2.583441 CCCCTTCGTCCTCTGCACA 61.583 63.158 0.00 0.00 0.00 4.57
328 329 2.266055 CCCCTTCGTCCTCTGCAC 59.734 66.667 0.00 0.00 0.00 4.57
329 330 3.003173 CCCCCTTCGTCCTCTGCA 61.003 66.667 0.00 0.00 0.00 4.41
343 344 1.177401 GCACAAATCTTCTGTCCCCC 58.823 55.000 0.00 0.00 0.00 5.40
344 345 0.804989 CGCACAAATCTTCTGTCCCC 59.195 55.000 0.00 0.00 0.00 4.81
345 346 0.804989 CCGCACAAATCTTCTGTCCC 59.195 55.000 0.00 0.00 0.00 4.46
346 347 0.804989 CCCGCACAAATCTTCTGTCC 59.195 55.000 0.00 0.00 0.00 4.02
347 348 1.808411 TCCCGCACAAATCTTCTGTC 58.192 50.000 0.00 0.00 0.00 3.51
348 349 2.359900 GATCCCGCACAAATCTTCTGT 58.640 47.619 0.00 0.00 0.00 3.41
349 350 1.328680 CGATCCCGCACAAATCTTCTG 59.671 52.381 0.00 0.00 0.00 3.02
350 351 1.656652 CGATCCCGCACAAATCTTCT 58.343 50.000 0.00 0.00 0.00 2.85
362 363 4.752879 ACCAACCGTGCGATCCCG 62.753 66.667 0.00 0.00 39.16 5.14
363 364 2.818274 GACCAACCGTGCGATCCC 60.818 66.667 0.00 0.00 0.00 3.85
364 365 2.047655 TGACCAACCGTGCGATCC 60.048 61.111 0.00 0.00 0.00 3.36
365 366 2.726691 CGTGACCAACCGTGCGATC 61.727 63.158 0.00 0.00 0.00 3.69
366 367 2.736995 CGTGACCAACCGTGCGAT 60.737 61.111 0.00 0.00 0.00 4.58
369 370 4.307908 GTGCGTGACCAACCGTGC 62.308 66.667 0.00 0.00 0.00 5.34
370 371 0.946700 TATGTGCGTGACCAACCGTG 60.947 55.000 0.00 0.00 0.00 4.94
371 372 0.036765 ATATGTGCGTGACCAACCGT 60.037 50.000 0.00 0.00 0.00 4.83
372 373 0.650512 GATATGTGCGTGACCAACCG 59.349 55.000 0.00 0.00 0.00 4.44
373 374 0.650512 CGATATGTGCGTGACCAACC 59.349 55.000 0.00 0.00 0.00 3.77
374 375 0.650512 CCGATATGTGCGTGACCAAC 59.349 55.000 0.00 0.00 0.00 3.77
375 376 0.461163 CCCGATATGTGCGTGACCAA 60.461 55.000 0.00 0.00 0.00 3.67
376 377 1.142965 CCCGATATGTGCGTGACCA 59.857 57.895 0.00 0.00 0.00 4.02
377 378 2.244651 GCCCGATATGTGCGTGACC 61.245 63.158 0.00 0.00 0.00 4.02
378 379 2.585869 CGCCCGATATGTGCGTGAC 61.586 63.158 0.00 0.00 43.12 3.67
379 380 2.279186 CGCCCGATATGTGCGTGA 60.279 61.111 0.00 0.00 43.12 4.35
380 381 3.337889 CCGCCCGATATGTGCGTG 61.338 66.667 8.68 0.00 46.44 5.34
383 384 1.738099 CTAGCCGCCCGATATGTGC 60.738 63.158 0.00 0.00 0.00 4.57
384 385 1.738099 GCTAGCCGCCCGATATGTG 60.738 63.158 2.29 0.00 0.00 3.21
385 386 2.657237 GCTAGCCGCCCGATATGT 59.343 61.111 2.29 0.00 0.00 2.29
386 387 2.284798 ATCGCTAGCCGCCCGATATG 62.285 60.000 9.66 0.00 39.64 1.78
387 388 0.750546 TATCGCTAGCCGCCCGATAT 60.751 55.000 9.66 0.00 41.40 1.63
388 389 1.374343 CTATCGCTAGCCGCCCGATA 61.374 60.000 9.66 8.89 41.40 2.92
389 390 2.675423 TATCGCTAGCCGCCCGAT 60.675 61.111 9.66 8.16 43.32 4.18
390 391 3.362797 CTATCGCTAGCCGCCCGA 61.363 66.667 9.66 0.00 36.73 5.14
391 392 3.362797 TCTATCGCTAGCCGCCCG 61.363 66.667 9.66 0.00 36.73 6.13
392 393 2.258897 GTCTATCGCTAGCCGCCC 59.741 66.667 9.66 0.00 36.73 6.13
393 394 2.258897 GGTCTATCGCTAGCCGCC 59.741 66.667 9.66 0.00 36.73 6.13
394 395 2.126812 CGGTCTATCGCTAGCCGC 60.127 66.667 9.66 0.00 37.62 6.53
395 396 2.561885 CCGGTCTATCGCTAGCCG 59.438 66.667 9.66 16.88 40.89 5.52
396 397 2.258897 GCCGGTCTATCGCTAGCC 59.741 66.667 9.66 0.00 0.00 3.93
397 398 2.258897 GGCCGGTCTATCGCTAGC 59.741 66.667 4.06 4.06 0.00 3.42
398 399 1.512996 TTCGGCCGGTCTATCGCTAG 61.513 60.000 27.83 0.00 0.00 3.42
399 400 1.102809 TTTCGGCCGGTCTATCGCTA 61.103 55.000 27.83 0.00 0.00 4.26
400 401 2.351336 CTTTCGGCCGGTCTATCGCT 62.351 60.000 27.83 0.00 0.00 4.93
401 402 1.949631 CTTTCGGCCGGTCTATCGC 60.950 63.158 27.83 0.00 0.00 4.58
402 403 0.179119 AACTTTCGGCCGGTCTATCG 60.179 55.000 27.83 9.46 0.00 2.92
403 404 1.287425 CAACTTTCGGCCGGTCTATC 58.713 55.000 27.83 0.00 0.00 2.08
404 405 0.107848 CCAACTTTCGGCCGGTCTAT 60.108 55.000 27.83 6.57 0.00 1.98
405 406 1.294138 CCAACTTTCGGCCGGTCTA 59.706 57.895 27.83 1.61 0.00 2.59
406 407 2.032071 CCAACTTTCGGCCGGTCT 59.968 61.111 27.83 2.04 0.00 3.85
407 408 3.053896 CCCAACTTTCGGCCGGTC 61.054 66.667 27.83 0.00 0.00 4.79
412 413 4.056125 GCCAGCCCAACTTTCGGC 62.056 66.667 0.00 0.00 46.09 5.54
413 414 3.737172 CGCCAGCCCAACTTTCGG 61.737 66.667 0.00 0.00 0.00 4.30
414 415 4.404654 GCGCCAGCCCAACTTTCG 62.405 66.667 0.00 0.00 37.42 3.46
415 416 3.294493 TGCGCCAGCCCAACTTTC 61.294 61.111 4.18 0.00 44.33 2.62
416 417 3.605664 GTGCGCCAGCCCAACTTT 61.606 61.111 4.18 0.00 44.33 2.66
429 430 4.880537 CTGCTAGGCTCCCGTGCG 62.881 72.222 0.00 0.00 31.62 5.34
430 431 1.749334 ATACTGCTAGGCTCCCGTGC 61.749 60.000 0.00 0.00 0.00 5.34
431 432 1.542030 CTATACTGCTAGGCTCCCGTG 59.458 57.143 0.00 0.00 0.00 4.94
432 433 1.145325 ACTATACTGCTAGGCTCCCGT 59.855 52.381 0.00 0.00 0.00 5.28
433 434 1.912417 ACTATACTGCTAGGCTCCCG 58.088 55.000 0.00 0.00 0.00 5.14
434 435 3.358118 CCTACTATACTGCTAGGCTCCC 58.642 54.545 0.00 0.00 0.00 4.30
435 436 3.245336 ACCCTACTATACTGCTAGGCTCC 60.245 52.174 0.00 0.00 0.00 4.70
436 437 4.036941 ACCCTACTATACTGCTAGGCTC 57.963 50.000 0.00 0.00 0.00 4.70
437 438 4.850963 TCTACCCTACTATACTGCTAGGCT 59.149 45.833 0.00 0.00 0.00 4.58
438 439 5.176741 TCTACCCTACTATACTGCTAGGC 57.823 47.826 0.00 0.00 0.00 3.93
439 440 7.337436 GTCAATCTACCCTACTATACTGCTAGG 59.663 44.444 0.00 0.00 0.00 3.02
440 441 8.104566 AGTCAATCTACCCTACTATACTGCTAG 58.895 40.741 0.00 0.00 0.00 3.42
441 442 7.986704 AGTCAATCTACCCTACTATACTGCTA 58.013 38.462 0.00 0.00 0.00 3.49
442 443 6.854578 AGTCAATCTACCCTACTATACTGCT 58.145 40.000 0.00 0.00 0.00 4.24
443 444 7.884354 ACTAGTCAATCTACCCTACTATACTGC 59.116 40.741 0.00 0.00 0.00 4.40
446 447 9.382275 GCTACTAGTCAATCTACCCTACTATAC 57.618 40.741 0.00 0.00 0.00 1.47
447 448 9.109246 TGCTACTAGTCAATCTACCCTACTATA 57.891 37.037 0.00 0.00 0.00 1.31
448 449 7.884354 GTGCTACTAGTCAATCTACCCTACTAT 59.116 40.741 0.00 0.00 0.00 2.12
449 450 7.222872 GTGCTACTAGTCAATCTACCCTACTA 58.777 42.308 0.00 0.00 0.00 1.82
450 451 6.063404 GTGCTACTAGTCAATCTACCCTACT 58.937 44.000 0.00 0.00 0.00 2.57
451 452 5.241285 GGTGCTACTAGTCAATCTACCCTAC 59.759 48.000 0.00 0.00 0.00 3.18
452 453 5.103813 TGGTGCTACTAGTCAATCTACCCTA 60.104 44.000 0.00 0.00 0.00 3.53
453 454 4.216708 GGTGCTACTAGTCAATCTACCCT 58.783 47.826 0.00 0.00 0.00 4.34
454 455 3.958798 TGGTGCTACTAGTCAATCTACCC 59.041 47.826 0.00 0.00 0.00 3.69
455 456 4.401519 TGTGGTGCTACTAGTCAATCTACC 59.598 45.833 0.00 1.86 0.00 3.18
456 457 5.125739 ACTGTGGTGCTACTAGTCAATCTAC 59.874 44.000 0.00 0.00 0.00 2.59
457 458 5.262009 ACTGTGGTGCTACTAGTCAATCTA 58.738 41.667 0.00 0.00 0.00 1.98
458 459 4.090090 ACTGTGGTGCTACTAGTCAATCT 58.910 43.478 0.00 0.00 0.00 2.40
459 460 4.457834 ACTGTGGTGCTACTAGTCAATC 57.542 45.455 0.00 0.00 0.00 2.67
460 461 4.891992 AACTGTGGTGCTACTAGTCAAT 57.108 40.909 0.00 0.00 0.00 2.57
461 462 4.682778 AAACTGTGGTGCTACTAGTCAA 57.317 40.909 0.00 0.00 0.00 3.18
462 463 4.682778 AAAACTGTGGTGCTACTAGTCA 57.317 40.909 0.00 0.00 0.00 3.41
531 532 6.780706 AACTTTTAGACAGATGGTTACGTG 57.219 37.500 0.00 0.00 0.00 4.49
532 533 6.987992 TCAAACTTTTAGACAGATGGTTACGT 59.012 34.615 0.00 0.00 0.00 3.57
533 534 7.360101 CCTCAAACTTTTAGACAGATGGTTACG 60.360 40.741 0.00 0.00 0.00 3.18
534 535 7.660208 TCCTCAAACTTTTAGACAGATGGTTAC 59.340 37.037 0.00 0.00 0.00 2.50
537 538 6.187727 TCCTCAAACTTTTAGACAGATGGT 57.812 37.500 0.00 0.00 0.00 3.55
548 549 1.686587 CCGGCCTTTCCTCAAACTTTT 59.313 47.619 0.00 0.00 0.00 2.27
565 570 3.895102 TTTACGACGCACCGACCGG 62.895 63.158 6.94 6.94 42.03 5.28
683 696 2.258726 GGGTGGCGTTGGACTGAAC 61.259 63.158 0.00 0.00 0.00 3.18
684 697 2.112297 GGGTGGCGTTGGACTGAA 59.888 61.111 0.00 0.00 0.00 3.02
685 698 4.308458 CGGGTGGCGTTGGACTGA 62.308 66.667 0.00 0.00 0.00 3.41
714 727 2.517450 GCACACGCAGCTATCCGAC 61.517 63.158 7.48 0.00 38.36 4.79
839 872 2.222819 GCGTGTTTTATTCTGGCGAGAG 60.223 50.000 0.00 0.00 0.00 3.20
889 925 2.041755 AGGGGGAGGAAGAATGTTTGTC 59.958 50.000 0.00 0.00 0.00 3.18
893 929 1.299939 GGAGGGGGAGGAAGAATGTT 58.700 55.000 0.00 0.00 0.00 2.71
894 930 0.624795 GGGAGGGGGAGGAAGAATGT 60.625 60.000 0.00 0.00 0.00 2.71
896 932 1.006227 GGGGAGGGGGAGGAAGAAT 59.994 63.158 0.00 0.00 0.00 2.40
947 988 0.315251 GTGGGCTTGGTCTTCTTTGC 59.685 55.000 0.00 0.00 0.00 3.68
948 989 0.961753 GGTGGGCTTGGTCTTCTTTG 59.038 55.000 0.00 0.00 0.00 2.77
949 990 0.537371 CGGTGGGCTTGGTCTTCTTT 60.537 55.000 0.00 0.00 0.00 2.52
950 991 1.073199 CGGTGGGCTTGGTCTTCTT 59.927 57.895 0.00 0.00 0.00 2.52
951 992 2.750350 CGGTGGGCTTGGTCTTCT 59.250 61.111 0.00 0.00 0.00 2.85
952 993 2.359975 CCGGTGGGCTTGGTCTTC 60.360 66.667 0.00 0.00 0.00 2.87
953 994 2.852075 TCCGGTGGGCTTGGTCTT 60.852 61.111 0.00 0.00 0.00 3.01
954 995 3.322466 CTCCGGTGGGCTTGGTCT 61.322 66.667 0.00 0.00 0.00 3.85
955 996 4.410400 CCTCCGGTGGGCTTGGTC 62.410 72.222 15.09 0.00 0.00 4.02
969 1010 2.517166 GGGAAGGATTGCGGCCTC 60.517 66.667 0.00 0.00 37.26 4.70
970 1011 4.489771 CGGGAAGGATTGCGGCCT 62.490 66.667 0.00 0.00 37.26 5.19
971 1012 4.796495 ACGGGAAGGATTGCGGCC 62.796 66.667 0.00 0.00 40.32 6.13
973 1014 2.112815 GGAACGGGAAGGATTGCGG 61.113 63.158 0.00 0.00 42.30 5.69
974 1015 1.376683 TGGAACGGGAAGGATTGCG 60.377 57.895 0.00 0.00 37.26 4.85
975 1016 0.322546 AGTGGAACGGGAAGGATTGC 60.323 55.000 0.00 0.00 45.86 3.56
976 1017 1.739067 GAGTGGAACGGGAAGGATTG 58.261 55.000 0.00 0.00 45.86 2.67
977 1018 0.249398 CGAGTGGAACGGGAAGGATT 59.751 55.000 0.00 0.00 45.86 3.01
978 1019 1.614241 CCGAGTGGAACGGGAAGGAT 61.614 60.000 0.00 0.00 45.86 3.24
979 1020 2.280552 CCGAGTGGAACGGGAAGGA 61.281 63.158 0.00 0.00 45.86 3.36
980 1021 2.264794 CCGAGTGGAACGGGAAGG 59.735 66.667 0.00 0.00 45.86 3.46
986 1027 2.885644 CCATCGCCGAGTGGAACG 60.886 66.667 9.15 0.00 45.86 3.95
987 1028 1.810030 GTCCATCGCCGAGTGGAAC 60.810 63.158 16.29 9.56 45.50 3.62
988 1029 2.279810 TGTCCATCGCCGAGTGGAA 61.280 57.895 16.29 7.60 45.50 3.53
989 1030 2.678580 TGTCCATCGCCGAGTGGA 60.679 61.111 12.30 12.30 42.03 4.02
990 1031 2.509336 GTGTCCATCGCCGAGTGG 60.509 66.667 8.65 8.65 36.82 4.00
991 1032 2.880879 CGTGTCCATCGCCGAGTG 60.881 66.667 0.00 0.00 0.00 3.51
992 1033 4.129737 CCGTGTCCATCGCCGAGT 62.130 66.667 0.00 0.00 0.00 4.18
1323 1367 1.189524 TACTGGTGGTGGGGAAGTCG 61.190 60.000 0.00 0.00 0.00 4.18
1370 1418 6.938507 ACATGAATGATTGTTGCCTGTTTAT 58.061 32.000 0.00 0.00 0.00 1.40
1436 1655 1.533625 TGAGTTGCCAATGCTACCAC 58.466 50.000 0.00 0.00 43.12 4.16
1439 1658 4.708726 AATCTTGAGTTGCCAATGCTAC 57.291 40.909 0.00 0.00 42.55 3.58
1479 1701 1.795872 TCGGTGCGAAGTGTGTAATTG 59.204 47.619 0.00 0.00 31.06 2.32
1572 1794 1.937278 TTGTAAACGTGCGGTGAGAA 58.063 45.000 0.00 0.00 0.00 2.87
1576 1798 0.237235 AGCATTGTAAACGTGCGGTG 59.763 50.000 0.00 0.00 43.37 4.94
1578 1800 1.326576 CAAGCATTGTAAACGTGCGG 58.673 50.000 0.00 0.15 42.34 5.69
1620 1842 7.597386 ACCAATTTTATTCTGAGAAGTGCTTC 58.403 34.615 0.00 3.89 39.78 3.86
1648 1870 2.338500 CTCTTTCGTGGCTGGTTACTC 58.662 52.381 0.00 0.00 0.00 2.59
1675 1897 7.752239 CAGCTTTTCTCAAATCGACACATTTAT 59.248 33.333 0.00 0.00 0.00 1.40
1788 2011 9.360249 TTGCAATTTGATAGCAACATGCACAAC 62.360 37.037 24.26 3.47 46.65 3.32
1837 2060 4.899502 ACTTGGGATCACTAGTTTCTGTG 58.100 43.478 6.21 0.00 35.68 3.66
1936 2160 2.151502 TTCCTCTAGTGAGCAGGGAG 57.848 55.000 0.00 0.00 38.93 4.30
1940 2164 5.788450 TCTTCTTTTTCCTCTAGTGAGCAG 58.212 41.667 0.00 0.00 38.93 4.24
2098 2324 4.507756 GCACAAAGGACAAGGTTCAATTTC 59.492 41.667 0.00 0.00 0.00 2.17
2138 2364 3.699038 TCCAGAACCAACCAGAACAAAAG 59.301 43.478 0.00 0.00 0.00 2.27
2226 2460 2.957491 TTTGTGGCACAAAGGACAAG 57.043 45.000 35.03 0.00 42.55 3.16
2328 2562 4.505566 GCAGATAGCTCATAATCCACCCAA 60.506 45.833 0.00 0.00 41.15 4.12
2358 2592 0.328258 TTCAGCTCCTGGCCCTAAAC 59.672 55.000 0.00 0.00 43.05 2.01
2403 2637 3.186613 CGAGATGCCATCAATGATCAGTG 59.813 47.826 16.89 16.89 0.00 3.66
2430 2664 9.903682 CAAAACATGTTATCTTGTTGAGAATCT 57.096 29.630 12.39 0.00 40.27 2.40
2463 2697 1.544246 GGGAAAACATTCCACGGAAGG 59.456 52.381 8.86 8.86 42.89 3.46
2471 2705 2.640184 CTAGACCGGGGAAAACATTCC 58.360 52.381 6.32 0.00 40.38 3.01
2499 2752 2.045926 AAGCATCCACACTCGCCC 60.046 61.111 0.00 0.00 0.00 6.13
2501 2754 3.490890 GGAAGCATCCACACTCGC 58.509 61.111 2.32 0.00 45.79 5.03
2560 2825 9.784680 GCATAACTAGCGTATGTATACAAGTAT 57.215 33.333 10.14 0.00 32.87 2.12
2563 2828 7.088272 TGGCATAACTAGCGTATGTATACAAG 58.912 38.462 10.14 4.08 32.87 3.16
2565 2830 6.431852 TCTGGCATAACTAGCGTATGTATACA 59.568 38.462 8.27 8.27 32.87 2.29
2566 2831 6.849502 TCTGGCATAACTAGCGTATGTATAC 58.150 40.000 13.03 0.00 0.00 1.47
2567 2832 7.640597 ATCTGGCATAACTAGCGTATGTATA 57.359 36.000 13.03 3.18 0.00 1.47
2568 2833 5.977489 TCTGGCATAACTAGCGTATGTAT 57.023 39.130 13.03 0.00 0.00 2.29
2569 2834 5.977489 ATCTGGCATAACTAGCGTATGTA 57.023 39.130 13.03 5.17 0.00 2.29
2570 2835 4.873746 ATCTGGCATAACTAGCGTATGT 57.126 40.909 13.03 0.00 0.00 2.29
2571 2836 7.834068 AATAATCTGGCATAACTAGCGTATG 57.166 36.000 8.90 8.90 0.00 2.39
2572 2837 9.367444 GTTAATAATCTGGCATAACTAGCGTAT 57.633 33.333 0.00 0.00 0.00 3.06
2573 2838 8.582437 AGTTAATAATCTGGCATAACTAGCGTA 58.418 33.333 7.06 0.00 35.62 4.42
2574 2839 7.385205 CAGTTAATAATCTGGCATAACTAGCGT 59.615 37.037 8.22 0.00 35.62 5.07
2577 2842 8.607441 TGCAGTTAATAATCTGGCATAACTAG 57.393 34.615 8.22 5.55 35.62 2.57
2579 2844 7.557719 ACTTGCAGTTAATAATCTGGCATAACT 59.442 33.333 3.69 3.69 37.30 2.24
2580 2845 7.707104 ACTTGCAGTTAATAATCTGGCATAAC 58.293 34.615 0.00 0.00 32.94 1.89
2601 2866 3.987547 TCTGCAGAGTTCAGAGAACTTG 58.012 45.455 13.74 13.07 35.81 3.16
2867 3135 9.740239 CCAATACTCATTTCATTTAGGAACATG 57.260 33.333 0.00 0.00 0.00 3.21
2868 3136 8.416329 GCCAATACTCATTTCATTTAGGAACAT 58.584 33.333 0.00 0.00 0.00 2.71
2869 3137 7.395772 TGCCAATACTCATTTCATTTAGGAACA 59.604 33.333 0.00 0.00 0.00 3.18
2919 3187 5.511363 ACTCAAGTGTACTAGCAGTAGGAT 58.489 41.667 0.00 0.00 30.12 3.24
2925 3193 4.021894 ACAGGAACTCAAGTGTACTAGCAG 60.022 45.833 0.00 0.00 34.60 4.24
2962 3234 5.971202 CCGGCTTATGTGACATGAATTTTAC 59.029 40.000 8.61 0.00 0.00 2.01
2966 3238 3.620488 ACCGGCTTATGTGACATGAATT 58.380 40.909 8.61 0.00 0.00 2.17
2968 3240 2.779755 ACCGGCTTATGTGACATGAA 57.220 45.000 8.61 0.00 0.00 2.57
2969 3241 2.779755 AACCGGCTTATGTGACATGA 57.220 45.000 8.61 0.00 0.00 3.07
2970 3242 6.801539 ATATTAACCGGCTTATGTGACATG 57.198 37.500 8.61 0.00 0.00 3.21
2971 3243 7.500892 TGAAATATTAACCGGCTTATGTGACAT 59.499 33.333 0.00 2.65 0.00 3.06
2972 3244 6.824196 TGAAATATTAACCGGCTTATGTGACA 59.176 34.615 0.00 0.00 0.00 3.58
2980 3253 9.097257 CATTTTCATTGAAATATTAACCGGCTT 57.903 29.630 12.39 0.00 31.34 4.35
2982 3255 8.641499 TCATTTTCATTGAAATATTAACCGGC 57.359 30.769 12.39 0.00 31.34 6.13
2998 3271 6.209192 TGGCACTACAATGAACTCATTTTCAT 59.791 34.615 2.11 0.00 46.18 2.57
3000 3273 6.012658 TGGCACTACAATGAACTCATTTTC 57.987 37.500 2.11 0.00 43.48 2.29
3010 3283 9.019656 ACACTTAAAATAATGGCACTACAATGA 57.980 29.630 0.00 0.00 0.00 2.57
3011 3284 9.638239 AACACTTAAAATAATGGCACTACAATG 57.362 29.630 0.00 0.00 0.00 2.82
3099 3373 1.059584 TTCTCAGCACCACTTCCCCA 61.060 55.000 0.00 0.00 0.00 4.96
3117 3391 1.535462 CGTTTTGTCCTTGCGATCCTT 59.465 47.619 0.00 0.00 0.00 3.36
3135 3409 1.139058 GCACTGATATCTGGGTTCCGT 59.861 52.381 12.83 0.00 0.00 4.69
3138 3412 4.586841 AGAGTAGCACTGATATCTGGGTTC 59.413 45.833 12.83 6.68 0.00 3.62
3144 3418 7.604549 CATCAATGAGAGTAGCACTGATATCT 58.395 38.462 3.98 0.00 0.00 1.98
3147 3421 5.303845 AGCATCAATGAGAGTAGCACTGATA 59.696 40.000 0.00 0.00 0.00 2.15
3153 3427 2.093341 TGCAGCATCAATGAGAGTAGCA 60.093 45.455 0.00 0.00 0.00 3.49
3156 3430 4.773013 TCAATGCAGCATCAATGAGAGTA 58.227 39.130 8.77 0.00 0.00 2.59
3162 3436 4.335594 TCTTCTCTCAATGCAGCATCAATG 59.664 41.667 8.77 3.59 0.00 2.82
3165 3439 3.268330 GTCTTCTCTCAATGCAGCATCA 58.732 45.455 8.77 0.00 0.00 3.07
3171 3445 1.344438 ACGGTGTCTTCTCTCAATGCA 59.656 47.619 0.00 0.00 0.00 3.96
3240 3514 0.309302 CCACATTGTGCCGTCGAAAA 59.691 50.000 11.41 0.00 31.34 2.29
3312 3586 1.006805 CGATCTCCATGCCGACTCC 60.007 63.158 0.00 0.00 0.00 3.85
3327 3601 4.695928 GCAAAGAACTCTTCCTTAACCGAT 59.304 41.667 0.00 0.00 34.61 4.18
3373 3647 9.113838 GTATCTACAAGATCAAACATCAACCAT 57.886 33.333 0.00 0.00 36.20 3.55
3376 3650 8.935844 TGTGTATCTACAAGATCAAACATCAAC 58.064 33.333 0.00 0.00 38.04 3.18
3378 3652 8.093927 TGTGTGTATCTACAAGATCAAACATCA 58.906 33.333 0.00 0.00 38.04 3.07
3429 3703 8.879427 AAATTACAAGCTAGTGGATAAAAGGT 57.121 30.769 0.00 0.00 0.00 3.50
3430 3704 8.122952 CGAAATTACAAGCTAGTGGATAAAAGG 58.877 37.037 0.00 0.00 0.00 3.11
3431 3705 7.640240 GCGAAATTACAAGCTAGTGGATAAAAG 59.360 37.037 0.00 0.00 0.00 2.27
3441 3716 2.540101 CCGGAGCGAAATTACAAGCTAG 59.460 50.000 0.00 0.00 40.39 3.42
3452 3727 0.174845 CATGACCTACCGGAGCGAAA 59.825 55.000 9.46 0.00 0.00 3.46
3455 3730 1.956629 AACCATGACCTACCGGAGCG 61.957 60.000 9.46 0.00 0.00 5.03
3459 3734 5.008316 GCTAAATAAAACCATGACCTACCGG 59.992 44.000 0.00 0.00 0.00 5.28
3460 3735 5.008316 GGCTAAATAAAACCATGACCTACCG 59.992 44.000 0.00 0.00 0.00 4.02
3461 3736 5.889289 TGGCTAAATAAAACCATGACCTACC 59.111 40.000 0.00 0.00 0.00 3.18
3476 3751 7.885922 TGTTACATTTCACTCCTTGGCTAAATA 59.114 33.333 0.00 0.00 0.00 1.40
3477 3752 6.719370 TGTTACATTTCACTCCTTGGCTAAAT 59.281 34.615 0.00 0.00 0.00 1.40
3518 3813 5.647658 TGAATGTCACCAAGAACATGGATAC 59.352 40.000 3.07 1.95 43.54 2.24
3519 3814 5.814481 TGAATGTCACCAAGAACATGGATA 58.186 37.500 3.07 0.00 43.54 2.59
3520 3815 4.665451 TGAATGTCACCAAGAACATGGAT 58.335 39.130 3.07 0.00 43.54 3.41
3521 3816 4.097551 TGAATGTCACCAAGAACATGGA 57.902 40.909 3.07 0.00 43.54 3.41
3540 3838 8.836413 ACGATAAAAAGAAAACTTCAGACATGA 58.164 29.630 0.00 0.00 0.00 3.07
3556 3854 6.674066 ACACCCAACACATTACGATAAAAAG 58.326 36.000 0.00 0.00 0.00 2.27
3557 3855 6.262496 TGACACCCAACACATTACGATAAAAA 59.738 34.615 0.00 0.00 0.00 1.94
3562 3860 3.410631 TGACACCCAACACATTACGAT 57.589 42.857 0.00 0.00 0.00 3.73
3563 3861 2.912690 TGACACCCAACACATTACGA 57.087 45.000 0.00 0.00 0.00 3.43
3565 3863 3.219281 ACCTTGACACCCAACACATTAC 58.781 45.455 0.00 0.00 0.00 1.89
3566 3864 3.586470 ACCTTGACACCCAACACATTA 57.414 42.857 0.00 0.00 0.00 1.90
3569 3867 2.223803 AAACCTTGACACCCAACACA 57.776 45.000 0.00 0.00 0.00 3.72
3570 3868 2.232696 ACAAAACCTTGACACCCAACAC 59.767 45.455 0.00 0.00 36.33 3.32
3571 3869 2.494073 GACAAAACCTTGACACCCAACA 59.506 45.455 0.00 0.00 36.33 3.33
3574 3872 2.516227 TGACAAAACCTTGACACCCA 57.484 45.000 0.00 0.00 33.23 4.51
3576 3874 4.338118 TGATCTTGACAAAACCTTGACACC 59.662 41.667 0.00 0.00 37.03 4.16
3577 3875 5.499139 TGATCTTGACAAAACCTTGACAC 57.501 39.130 0.00 0.00 37.03 3.67
3578 3876 5.885352 TCTTGATCTTGACAAAACCTTGACA 59.115 36.000 0.00 0.00 35.79 3.58
3579 3877 6.260936 TCTCTTGATCTTGACAAAACCTTGAC 59.739 38.462 0.00 0.00 36.33 3.18
3580 3878 6.356556 TCTCTTGATCTTGACAAAACCTTGA 58.643 36.000 0.00 0.00 36.33 3.02
3581 3879 6.624352 TCTCTTGATCTTGACAAAACCTTG 57.376 37.500 0.00 0.00 38.61 3.61
3649 3947 9.559732 TCTGTCCAAACAATAAGTCCATATATG 57.440 33.333 5.68 5.68 34.24 1.78
3652 3950 7.861629 TCTCTGTCCAAACAATAAGTCCATAT 58.138 34.615 0.00 0.00 34.24 1.78
3657 3955 6.861065 TGTTCTCTGTCCAAACAATAAGTC 57.139 37.500 0.00 0.00 34.24 3.01
3662 3960 8.641498 AAGAATATGTTCTCTGTCCAAACAAT 57.359 30.769 5.07 0.00 43.80 2.71
3664 3962 9.739276 AATAAGAATATGTTCTCTGTCCAAACA 57.261 29.630 5.07 0.00 43.80 2.83
3679 3977 6.183324 CGCAGCATCATCGAATAAGAATATG 58.817 40.000 0.00 0.00 0.00 1.78
3680 3978 5.292834 CCGCAGCATCATCGAATAAGAATAT 59.707 40.000 0.00 0.00 0.00 1.28
3686 3984 2.238942 ACCGCAGCATCATCGAATAA 57.761 45.000 0.00 0.00 0.00 1.40
3691 3989 0.447406 TTCAAACCGCAGCATCATCG 59.553 50.000 0.00 0.00 0.00 3.84
3698 3996 2.792674 GGTTAAAAGTTCAAACCGCAGC 59.207 45.455 4.15 0.00 33.85 5.25
3699 3997 4.035278 TGGTTAAAAGTTCAAACCGCAG 57.965 40.909 12.33 0.00 44.62 5.18
3700 3998 4.451629 TTGGTTAAAAGTTCAAACCGCA 57.548 36.364 12.33 2.52 44.62 5.69
3701 3999 4.626172 TGTTTGGTTAAAAGTTCAAACCGC 59.374 37.500 13.03 7.52 44.62 5.68
3702 4000 6.754675 AGATGTTTGGTTAAAAGTTCAAACCG 59.245 34.615 13.03 0.00 44.62 4.44
3704 4002 8.926715 AGAGATGTTTGGTTAAAAGTTCAAAC 57.073 30.769 9.88 9.88 45.17 2.93
3705 4003 9.364989 CAAGAGATGTTTGGTTAAAAGTTCAAA 57.635 29.630 0.00 0.00 0.00 2.69
3706 4004 8.744652 TCAAGAGATGTTTGGTTAAAAGTTCAA 58.255 29.630 0.00 0.00 0.00 2.69
3707 4005 8.287439 TCAAGAGATGTTTGGTTAAAAGTTCA 57.713 30.769 0.00 0.00 0.00 3.18
3708 4006 9.750125 AATCAAGAGATGTTTGGTTAAAAGTTC 57.250 29.630 0.00 0.00 33.90 3.01
3710 4008 9.750125 GAAATCAAGAGATGTTTGGTTAAAAGT 57.250 29.630 0.00 0.00 33.90 2.66
3711 4009 9.971922 AGAAATCAAGAGATGTTTGGTTAAAAG 57.028 29.630 0.00 0.00 33.90 2.27
3712 4010 9.965824 GAGAAATCAAGAGATGTTTGGTTAAAA 57.034 29.630 0.00 0.00 33.90 1.52
3713 4011 9.354673 AGAGAAATCAAGAGATGTTTGGTTAAA 57.645 29.630 0.00 0.00 33.90 1.52
3714 4012 8.786898 CAGAGAAATCAAGAGATGTTTGGTTAA 58.213 33.333 0.00 0.00 33.90 2.01
3715 4013 8.156820 TCAGAGAAATCAAGAGATGTTTGGTTA 58.843 33.333 0.00 0.00 33.90 2.85
3718 4016 7.389884 TCTTCAGAGAAATCAAGAGATGTTTGG 59.610 37.037 0.00 0.00 33.90 3.28
3721 4019 9.517868 AATTCTTCAGAGAAATCAAGAGATGTT 57.482 29.630 0.00 0.00 44.61 2.71
3750 4048 9.948964 TCTTCAGTTATGAATTCTGATTTCTGA 57.051 29.630 7.05 9.88 44.32 3.27
3756 4054 9.902684 ACTTCATCTTCAGTTATGAATTCTGAT 57.097 29.630 7.05 0.00 44.32 2.90
3789 4087 3.553511 GCCGACAAGTACATCTGAATCAG 59.446 47.826 3.38 3.38 0.00 2.90
3791 4089 3.786635 AGCCGACAAGTACATCTGAATC 58.213 45.455 0.00 0.00 0.00 2.52
3792 4090 3.895232 AGCCGACAAGTACATCTGAAT 57.105 42.857 0.00 0.00 0.00 2.57
3793 4091 4.645136 AGATAGCCGACAAGTACATCTGAA 59.355 41.667 0.00 0.00 0.00 3.02
3794 4092 4.207955 AGATAGCCGACAAGTACATCTGA 58.792 43.478 0.00 0.00 0.00 3.27
3795 4093 4.541779 GAGATAGCCGACAAGTACATCTG 58.458 47.826 0.00 0.00 0.00 2.90
3797 4095 3.318275 TGGAGATAGCCGACAAGTACATC 59.682 47.826 0.00 0.00 0.00 3.06
3945 4248 3.518998 CATCGCCGAGGAGGACGT 61.519 66.667 0.00 0.00 45.00 4.34
3961 4264 1.445410 GTGAGCCGCGTGTACATCA 60.445 57.895 4.92 0.00 0.00 3.07
4004 4307 2.204244 ATGAACGGGGAGGGGGTT 60.204 61.111 0.00 0.00 0.00 4.11
4239 6043 2.295349 ACGAACCTAACACACTCGATGT 59.705 45.455 0.00 0.00 44.81 3.06
4240 6044 2.942710 ACGAACCTAACACACTCGATG 58.057 47.619 0.00 0.00 33.81 3.84
4241 6045 3.005050 TGAACGAACCTAACACACTCGAT 59.995 43.478 0.00 0.00 33.81 3.59
4242 6046 2.358582 TGAACGAACCTAACACACTCGA 59.641 45.455 0.00 0.00 33.81 4.04
4243 6047 2.734670 TGAACGAACCTAACACACTCG 58.265 47.619 0.00 0.00 35.68 4.18
4244 6048 3.432252 CCATGAACGAACCTAACACACTC 59.568 47.826 0.00 0.00 0.00 3.51
4245 6049 3.181458 ACCATGAACGAACCTAACACACT 60.181 43.478 0.00 0.00 0.00 3.55
4246 6050 3.059188 CACCATGAACGAACCTAACACAC 60.059 47.826 0.00 0.00 0.00 3.82
4272 6076 4.242586 TCTCGACCCACACCCCCA 62.243 66.667 0.00 0.00 0.00 4.96
4273 6077 3.391382 CTCTCGACCCACACCCCC 61.391 72.222 0.00 0.00 0.00 5.40
4283 6090 4.803426 CACGCCTGCCCTCTCGAC 62.803 72.222 0.00 0.00 0.00 4.20
4299 6106 3.858868 GAACAGGTGAGTCCGCGCA 62.859 63.158 8.75 0.00 41.99 6.09
4306 6113 0.536687 TCGTCTCCGAACAGGTGAGT 60.537 55.000 0.00 0.00 42.57 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.