>input_sequence_33533
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ATGGACACGGCGGCCGCGCCGAGGCACCACCAGCACCCGGCGCTGGGCGGTGGGCGGCGTAGGGGGCGG---CGCGGGGG
CGTGGCGCCGGTGCGGTGCTCGGGCTCGCCCGCGCAGGAGTTCGCGGCGCTGGCGTCGGTGTTCCGGCGGCGGCTGGTGG
TGGGGGCGAGCACGGCGGCGGCCGCGGCCGTGGGGGCCAACTTCGGGGGCGTCACCAGCTTCCTCCTCGGCCTCTCCCCG
GAGCTCGGCCGCTCGCTCCGGCTCGACGTGCTCTACCCCGTCGGCGGCTTCACCCGCTGCCTCGACTCCGACAGCGGATT
CGGTACCGACTTCCCCACCACCAGTAGCTTAG----TTTTGCTTCTTCTGCTCGTTTATAAACA----------------
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---------------------------------------------------------------------------GGCAA
CAATCATTCATGTATTCATGCTCTGTGACTGAGTGCATTTCTGAATTAGAATGCGTGGT---AGCATTGGCAACTCAAGA
TTTGTTCAGAATGAGATTAGCAATTACACACTTCGCACCGAGACTTCTCTGAATGCACGTTTAGTCATTCACATTGACCG
GGTTATGGTGCTCAACTATTCGCACTGAGACTTTTCTCACCGCACGTTTACAATGCTTGACACTGATAGCATTAGCAACT
CGAAGCACTTCTCAGAATAAAATTGGTAGGAGTAACCAGCCACGAAAGAGGAAAAAATAAATGTGTCGATTTGAGAAAAG
CTGATTTGACTGGCATTCTGGCAAATTGGTGTTCGGTCCGGGTTGATGCTCCTGCCATCAGCCACCAAATA-AAATTCAA
GGCAACCCTGGTTGTGCATGTTGCTATCAAATTGCAACTTTATGCCCCCACCAAAAAAGCACAGAAACTAGTGATCCCAA
GTAGGTGTGTTGTGTTCACATCCCACCCACAGAAAAATGAAGAAGAAAAGCGC-ATAATTCCTGAATTACCTTTACTTAC
TCCCTGCTCACTAGAGGAAAAAGAAGAAGAAAATAATATAATTCCAGAATTAGCCTAGTCTTTTAGTTCTTGTTGGTTCT
GGAATATGTCATCGGA-CAATGGGCAAAGGGGCACCT-TCAGTTTAGAGTTTAGACATCTCCCTGTATGTCTTTTTTCTA
CAAGAAATTGAACCTTGTCCTTTGTGCCACAGATTAGCCTGCCCTTTTGTTCTGGTTGGTTCTGGAATATGACATTGAGG
GGCA--------CCTTCAGTTAGACATTTCCCTGTATTTTTTTCTACTGAAAAATGATTCTTGTCCTTTGTGCCACAAAC
ATGAGTGGCTACAAAAAATGTGGTCCTTGCAGCTACAATCTACTACACCCATCTGCTATGTCATGCCTCCAATGGGATTG
TTTGGGTGGATTATGAGCTATCTGCTGCTGCGTTTAGGGCCAGGAGCTGAATGCCACATGTGCTCCATGTCAGCACCACT
GATCATTGATGGCATCTCGTGGCAGATTCTCAACAAGATAACATGTTTTGGATGTTCCTTCCGTGGAATGTT--------
TTCCCCGGTCTAGGACA-----------ATAGGGCGAGTGTGGATGCTTCCTAGC------------ATCGATAAGATTC
ATCATGTGCAATATCTTCTATGAAATACTTGTATACATACGCTAGTTATGCCAGATTATTAACTGCAAGTTCTCTGAACT
CT---GCAGAGTTCATCTATCCAGCAAACTGGGTTGGAGACCAGACAATACTATACAACCAAATTAAGAAAGCAGAGCTG
CAGAGATCACTAGACCCTCCGCCATTGACAAGTGGGAGTTCTCCATCTCGACCTCGGAACGTCAGTGGACCGGTGGCGGC
TTTTGGACCCCCGGGATCCAACGGGGAGCTCAATGTCAGCGTCATTGTATCAACCGTCCCACAAGACTTCTCGTAAGTAT
ACTTATATTTCATTCATGTTCCTAAATGAAATGAGTATTGGCACTTCTATCCTAGCGAAAGAAATCATCCTACTGC----
TAGTACACTTGAGTTCCTGTGTAAAACATGATCGTAAAATTCAT-GTCACATAAGCCGGTTAATATTTCAATGAAAATGA
GTTCATTGTAGTGCCATTATTTTA-AGTGTTTTCTAAAGTAGCATTGGAATGCTTGGAACAGGATCGAGTCTTTCGGCGG
TCCTAAAGATGTTGGGGAAGTGGTGCTGAGAAGGATCGCAAGGACAAAACGGAACCCAGATATCAGTGCTACTCTCATTG
ATGCTGCATTGAGAGAAGACACCGTGAACAATGTGAAATACTACAAGCTAGAGTTCCGAGTCGAAAGCCCTTCTTTTCGA
CGGCACAATGTGGCGGTCTGCTGCGCGAGAGACGGCAAACTGTACACCTTGAATGCCCAGGCGCCGGAGTCGGCATGGAG
ATCGGTTAAGGAAGAGTTCTTTGCGATGGCGGATTCCTTCAGCCTAATGGTTGATGTTTGA-------------------
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>chr3A_1_TraesCS3A01G454900
GCTGGAACCAGCAGTGCATGGAGCTACGACCGGCAGAGGTGTAGCTGGGAGAGAGGTATTTTTGCTGGAACCATGTGTCA
ATTTTGCTGCATCCGGCAATTTTTTTGCTGGAACCGGTGATGAGACCAACACGAACAGGCAACATGGAGAGTTGCATCCG
GCAATTTGTTTTGCTACTATCGTTGATGGACGAGAATGACGGGGGAGCTGCATCGACCTTTGTTTTGATGGCGAGATATG
ACGGCGGTGAGTTGCAACCGGCGAAGACGGCGAGCAAGATGCAAAGGCATGTGGCATGCTGCGTTCCTTTTTTTTCTCCC
CGCAAGATGTGCAGAGGACGAAGGGGGGACAGAAGATTTGTGCGGGATCGCACGGTTGGTCACGCACATATCGGGCGGCT
AGCGATAGACCGGCCGAAAGTTGGGCTGGCGCACGGGAGCCTAGCAGTATAGTAGGGTAGATTGACTAGTAGCACCACAG
TTTTTTCTTCCGGGCAGAAACGAGCTTAGAAAAAGACTTTGGAGAGAGATGCACGTAACCATCTGTCTAAAAGTTTGAGG
AAAGG----CCGGTCGGTGCGTCGTAAAAATCAGCCTTCG---TCAACCGCGGAGCGCGACAAATGGAGGCGAAACTCAT
TCCGCACTTCACCACCGGC-----CCGTGCACGCCCGCGTCCCGTGCGCGTGTCCGTTCAGTCCAACGCCACCCGGATCC
GATCTCGTCGGATAGCTGCGTG------------T----GCTGGACGGAGAGCCCAGAAGCGCTCGCTCCATCGGCCGCC
AGCCGGCCACGCAGTCCCATTCCCATTCCCACTCCCAGCGAAGCTCCGTCCGCCCG----CCGGTGAAAACCTCTCGCCA
GAATAAAACACGCCC---ACCAGCAGCAGTTCGGCAGCTCACCAGACAAACATTCTTCCTCCCCCTCCCCGTCGCGCGGC
TCCGGCCACCGCGCGC-----GCCGCGGCAAAGAAGACCAAGCCCACCGGAGGCCGCAATCCTTCCCGTTCCACTCGGCG
ATGGACACGGCGGCCGCGCCGAGGCACCACCAGCACCCGGCGCTGGGCGGTGGGCGGCGTAGGGGGCGG---CGCGGGGG
CGTGGCGCCGGTGCGGTGCTCGGGCTCGCCCGCGCAGGAGTTCGCGGCGCTGGCGTCGGTGTTCCGGCGGCGGCTGGTGG
TGGGGGCGAGCACGGCGGCGGCCGCGGCCGTGGGGGCCAACTTCGGGGGCGTCACCAGCTTCCTCCTCGGCCTCTCCCCG
GAGCTCGGCCGCTCGCTCCGGCTCGACGTGCTCTACCCCGTCGGCGGCTTCACCCGCTGCCTCGACTCCGACAGCGGATT
CGGTACCGACTTCCCCACCACCAGTAGCTTAG----TTTTGCTTCTTCTGCTCGTTTATAAACA----------------
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---------------------------------------------------------------------------GGCAA
CAATCATTCATGTATTCATGCTCTGTGACTGAGTGCATTTCTGAATTAGAATGCGTGGT---AGCATTGGCAACTCAAGA
TTTGTTCAGAATGAGATTAGCAATTACACACTTCGCACCGAGACTTCTCTGAATGCACGTTTAGTCATTCACATTGACCG
GGTTATGGTGCTCAACTATTCGCACTGAGACTTTTCTCACCGCACGTTTACAATGCTTGACACTGATAGCATTAGCAACT
CGAAGCACTTCTCAGAATAAAATTGGTAGGAGTAACCAGCCACGAAAGAGGAAAAAATAAATGTGTCGATTTGAGAAAAG
CTGATTTGACTGGCATTCTGGCAAATTGGTGTTCGGTCCGGGTTGATGCTCCTGCCATCAGCCACCAAATA-AAATTCAA
GGCAACCCTGGTTGTGCATGTTGCTATCAAATTGCAACTTTATGCCCCCACCAAAAAAGCACAGAAACTAGTGATCCCAA
GTAGGTGTGTTGTGTTCACATCCCACCCACAGAAAAATGAAGAAGAAAAGCGC-ATAATTCCTGAATTACCTTTACTTAC
TCCCTGCTCACTAGAGGAAAAAGAAGAAGAAAATAATATAATTCCAGAATTAGCCTAGTCTTTTAGTTCTTGTTGGTTCT
GGAATATGTCATCGGA-CAATGGGCAAAGGGGCACCT-TCAGTTTAGAGTTTAGACATCTCCCTGTATGTCTTTTTTCTA
CAAGAAATTGAACCTTGTCCTTTGTGCCACAGATTAGCCTGCCCTTTTGTTCTGGTTGGTTCTGGAATATGACATTGAGG
GGCA--------CCTTCAGTTAGACATTTCCCTGTATTTTTTTCTACTGAAAAATGATTCTTGTCCTTTGTGCCACAAAC
ATGAGTGGCTACAAAAAATGTGGTCCTTGCAGCTACAATCTACTACACCCATCTGCTATGTCATGCCTCCAATGGGATTG
TTTGGGTGGATTATGAGCTATCTGCTGCTGCGTTTAGGGCCAGGAGCTGAATGCCACATGTGCTCCATGTCAGCACCACT
GATCATTGATGGCATCTCGTGGCAGATTCTCAACAAGATAACATGTTTTGGATGTTCCTTCCGTGGAATGTT--------
TTCCCCGGTCTAGGACA-----------ATAGGGCGAGTGTGGATGCTTCCTAGC------------ATCGATAAGATTC
ATCATGTGCAATATCTTCTATGAAATACTTGTATACATACGCTAGTTATGCCAGATTATTAACTGCAAGTTCTCTGAACT
CT---GCAGAGTTCATCTATCCAGCAAACTGGGTTGGAGACCAGACAATACTATACAACCAAATTAAGAAAGCAGAGCTG
CAGAGATCACTAGACCCTCCGCCATTGACAAGTGGGAGTTCTCCATCTCGACCTCGGAACGTCAGTGGACCGGTGGCGGC
TTTTGGACCCCCGGGATCCAACGGGGAGCTCAATGTCAGCGTCATTGTATCAACCGTCCCACAAGACTTCTCGTAAGTAT
ACTTATATTTCATTCATGTTCCTAAATGAAATGAGTATTGGCACTTCTATCCTAGCGAAAGAAATCATCCTACTGC----
TAGTACACTTGAGTTCCTGTGTAAAACATGATCGTAAAATTCAT-GTCACATAAGCCGGTTAATATTTCAATGAAAATGA
GTTCATTGTAGTGCCATTATTTTA-AGTGTTTTCTAAAGTAGCATTGGAATGCTTGGAACAGGATCGAGTCTTTCGGCGG
TCCTAAAGATGTTGGGGAAGTGGTGCTGAGAAGGATCGCAAGGACAAAACGGAACCCAGATATCAGTGCTACTCTCATTG
ATGCTGCATTGAGAGAAGACACCGTGAACAATGTGAAATACTACAAGCTAGAGTTCCGAGTCGAAAGCCCTTCTTTTCGA
CGGCACAATGTGGCGGTCTGCTGCGCGAGAGACGGCAAACTGTACACCTTGAATGCCCAGGCGCCGGAGTCGGCATGGAG
ATCGGTTAAGGAAGAGTTCTTTGCGATGGCGGATTCCTTCAGCCTAATGGTTGATGTTTGATCTTGTAGATACACACACA
GTTTTGTATCCATGACCCTTGGACCTTT-TATCCACTAGCTTGTAATTTCGCTCCGGTAGGTCATGGTTTTATTTAGCCA
AGGAGTGAAATGTAACATAAATAAATATT--------------------TCTGTATCC---ATGTTCTTGGTGACATTCA
TGTCTGAAGTTTTCTTTTTATCGTAATGTGTTGGGTGTCAAGGTTTTGTCAAGATCAAGAGAAATTTAACAGAAATGATT
CTGCATCATAATATTGTTGTTACACACATATATGGACTTATTGTTTGGACAGAGAACATATTCTTATTCGATGATGCTGC
GGTTTGAACTTTTAACCAAACATCTCTTGATTTCTCTGAAGAATTATTCAGAAATCAGAATTCATAACTGAAGATGAAGT
TTGCTGCTGATTCAG-----ATGTACTTGTCGGCTATCTCCACGAGGAGGTCCGAGAGCTCCCTGGGCTTGGAGAACATG
GGCATGTGATCGGCCCCCGCCAGCCCCCGCACCTCCGTGCCGGGGTTCCACGACGCCATCCGCCGCTGGAACTCCGGCGA
CCACGAGACGTCCTCCTCGGCGATGATGTACACGCGGCTCACCGCGCCGTACCTCTCCGCCGTGAGAACCCCCTCCCCGT
TCATCGCGGCGTCGTCCACGAACTGCCGCGACGGCCTCACCAGCATCGTCGCCAGCGTCAGGTCCTCCGGCGGGCTGAGC
TGATACAGCCGCTGCGCCATGTACTCCGGCCCC-----------------------------------------------
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--------------AGCAGGAACGTCTTGCAAGCGCGCTCCGGGTCGTCGCCGCCGGTGGTCTCGATCACGCTGTCCATG
AAGAAACCCGGGCCCCTTTCTTGCGCAAACTGTAATATCGAGACATCGAGTGTGTTAGGTTCGTTCATGGTGGCGTG---
GGGGTGTGGGTCGAGAGGGCAGGCGTGCGCGGACTCACCTGTTCGGAGACGAACTTGAGGGGCTTCCCGGCGGCCGGCAT
GGCGGCGGAGGCGAAGACGGCGACGGCGACCCTG
>chr3D_471
AGCACTACAG----------------------------------------------------------------------
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-TTTTTCTTCCGGGCAGAAACGAGCTTAGAAAAAGACCTTGGATGGAGATG----TA---------CTGGAAGTTTGAGG
AAAAG----TCGGTCGGTGCGTCGTAAAACTC-----GCCTTGTCGAACGCGGAGCGCGACAAATGGAGGCGAAACTCAT
TCCGCACTTCACCACCGCCCGCGTCC----------------CGTGCGCGTGTCG-----GTCCAACGCCACCCGGATCC
GATCTCATCGGATAGCTGCGTGCGTGCGTGCGTCT----GCTGGACGGAGAACCCGGAAGCGCTCGCTCCATCGGCCGCC
AGCCGGCCACGCAGTCCCATTCCCATTCCCACTCCCAGCGAAGCTCCGTCCGCCCGCCCGCCGGTGAAAACGTCTCGCCA
GAATAAAACACGCGC---ACCAGCAGCAGTTCGGCAGCTCACCGAACATCCTTCCTCC---CCTCTCCCCGTCGCGTGGC
TCCGGCCACCGCGCGC-----GCCCCGAGGCCATC----ATCCCTCCAGCCAGT----------------------CGCG
ATGGACACGGCGGCCGCGGCGAGGCG------GCACCCGGCGCTGGGCGGGAGGCGGCGTAGGG---GG---CGCGGGGG
CGTGGCGCCGGTGCGGTGCTCCGGCTCGCCCGCGCAGGAGTTCGCGGCGCTGGCGTCTGTGTTCCGGCGGCGGCTGGTGG
TGGGGGCGAGCACGGCGGCGGCGGCGGCCGTGGGGGCCAACTTCGGGGGCGTCACCAGCTTCCTCCTCGGCCTCTCCCCG
GAGCTCGGCCGCTCGCTCCGGCTCGACGTGCTCTACCCCGTCGGCGGATTCACCCGCTGCCTCGACTCCGACAGCGGATT
CGGTACTACTAACAAC----------------------TTGCTTCCTCTCCTGCTTATCAATTCTTGGTTGAGCAAATTG
AGCTGCTGCCATGAATTCTCTTCTCCTCAATGGGTTGAGCCGCTCCTTCTCATCCATCGCGCCATTTTGCTAATTCTTCC
GAGCTCAAAGCTTCCCGATGCTAGGCCTGTAGGCCATACACTGTAACCCATTCGATTCGGGTCAACAGGGTTCACGGCAA
CAATCATTCATGCCTTCATGCTCTCTGACTGAGCGCACGTT----TTAGAGTGCTTGCTGACAGCATTGGCAACGCAAGT
TTTGTTCAGAATGAGATTAGTAGTTACACACTTCACACAGAGACTTCTCTGAATGCACGTTTAGTCATTCACATTGACCG
GTTTATAGTGCTCAGCTATTCACACCGAGACTTCTCTGGGCGCACGTTTACAATGCTTGACACTGATAGCATTAGCAACT
C-AAGCATTTCTCAGAATAAAGT---TAGTAGTAACCAGCCACGAAAGAGGAAAAA-TAAATGTGTCGATTTGAGAAAAG
CTGATTTGACTGGCATTCTGGCAAATTGGTGTTCGGTCCAGGTTGATGCTCCTGCCATCAGCCACGAAACACAAATTGAA
GGCAACCCTGCTTGTGCATGTTGCTATCAAATTGCAACTTTGTGCCCCCACCAAAAAAGTACAGAAACTAGTGATCCCAA
GTAGTTGTGTTGTGTTCACATCCCACCCACAGAAAAATAAGAGAAGTGTGTGAATTCGGAATT--AGTACATCGGCATAT
TCCATGCTCACTTGGA--GAAGAAAGACAGATTAGATCAGGC--------------AGCCTTTTTGTTCCGGTTGGTTCT
GGAATATGACATCCAA-----GGGCAGAGAGGCACCT-TC-------AATTCAGACATTTCCCTGTAGTATTTTCTTCCA
AAG---ATCGAACCTTGTCCTTTGTGCCACAAATTAGCCAT-CTTCTTCTTCTGGTTGGTTCTGGAATATGACATTGAGG
GGCAGAGGGGCACCTTCAGTTAGACATTTCTCTATAT-TTTTTCTACTGAAAAATGATTTTTGTCCTTTGTGCCACAAGC
ATGAGTGGCTACAAAAAATGTGGTCCTTGCTGCTACAGCCCACTACATCCATCTGCTATATCATGCCTCCAATGGGATTG
TATGGGTAGATTATGAGCTATCTGGTGCTGCATTTAGGGCC----------TGCCACCTGTGCTCCATGTCATCTTGACT
GATCATTTATGTCATCTGG-------TTCTCAACAAGATAACAAGTTTTGGTGGTTTGTTCTGTCAAATGTT--------
TTCCCCTGGCTGAGAACATGTTAATAGGATACCACAAGTGTGGATCCTTCATCTTTGTTTTAGATGTATCATTTACATTT
ATCATCTGCAATATCTTCTGTGAAGTAGTGTACATATGCCGAT--TTATGCCAGATTATTAACTTTAAAGTCTCTTAACT
CTTCTGCAGAGTTCATCTATCCAGCAAACTGGGTTGGAGACCAGACGATACTATACAATCAAATTAAGAAGGCAGAGCTG
CAAAGATCACTAGACCCTCCGCCATTGACAAGTGGGAGTTCTCCATCTCGACCTCGGAATGTCAGTGGACCGGTGGCGGC
TTTTGGCCCCCCGGGATCCAACGGGGAGCTCAATGTCAGTATCATTGTGTCGACCGTTCCACAAGACTTCTCGTAAGTAT
GCTTATATTTCATTTCAGTTCCTAAATGAAATGAGTATTGCCACTTCTATCCCACCGAAAGAGATCTTCCTAGTGC----
TAGTACACTTGAGTTCCTGTGTGAAAATTGACA-----------------------------------------------
-----------------TTTTTTC-AGTATCCTCTAAAGCATTGTTGAACTGCTTGGAACAGGATTGAGTCTTTCGGCGG
TCCTAAAGATGTCGGGGAAGTGGTGCTGAGGAGGATCGCAAGGACAAAGCGAAACCCGGACATCAGCGCCACTCTGATCG
ATGCCGCATTGAGAGAAGACACCGTGAACAATGTGAAATACTACAAGCTAGAGTTCCGGGTCGAAAGCCCTTCCTTCCGA
CGGCACAATGTGGCGGTGTGCTGCGCGAGAGACGGCAAACTGTACACCTTGAATGCCCAGGCGCCCGAGTCGGCGTGGAG
GTCGGTTAAGGAAGAGTTCTTTGCGATGGCGGATTCCTTCAGCCTAGTGATCGATGCTTGATCTTGTAGATACACACACA
GTTTTGTATCCATGACCCTTGGGAGTTTCTATCCATTAGCTTGTAACTTTGCTTGCGAATGTCATAGTTTCGTTTAGCCG
AGGAGTAAAACGTAACATAAATAAATGTTGAAGCGGAAGTGGTAAATATTTCTGTACCATAATGTTCTTTGTGACATCCA
TGTCTGAAGTTTGAATTTTGACCCAAGCAATCCATCTCGATTCCTCTCAAG-----------------------------
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----------------------------------------GAATTAT-------TCAGAATTCATAACTGAAGATGAAGT
TTGCTGATTCAGAATTTCACATGTACTTGTCGGCTATCTCCACGAGGAGATCTGAGAGCTCCCTGGGCTTGGAGAACATG
GGCATGTGATCGGCCCCCTGGAGCCCCCGCACCTCCGCGCCGGGGTTCCACGACGCCATCCGCCGCTGGAACTCGGGCGA
CCACGAGGCGTCCTCCTCGGCGACGACGTACACGCGGCTCACCGCGCCGTACCTCTCCGCCGTGAGCACCTCCTCCCCGT
TCATCACGGCGTCGTCCACGAACCGCCGCGACGGCCTCACCAGCATCGTCGCCAGCGTCAGGTCCTCCGCTGGGCTGAGC
TGATACAGTCGCTGCGCCATGTACTCCGGCCCC-----------------------------------------------
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--------------AGCAGGAACGTCTTGCAAGCGCGCTCCAGGTCGTCGCCGCCGGTGGTCTCGATCACGCTGTCCATG
AAGAAACCCGGGCCCCTTTCTTGCGCAAACTGTAATATCGAGTGT-----TGTGTTAGGTTCGTTCATGGTGGGGGCGT-
GGGGTGTGGATCGAGAGGGTGGGCGCGCGC--GCTGACCTGTTCGGAGACGAACTTGAGGGGCTTCCCGGCGGCCGGCAT
GGCGGCGGAGGCGAAGACGGCGACGGCGACCCTG
>chr3B_505
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------------------------CTTAGAAAAAGACTTTGGAGAGAGATG----TAGCCATCTGTCTGAAAGTTTTAGG
AAAGGTCGTTCGGTCGGTGCGTCGTAAAAATCTGCCGGCCTTCTCGAGCGCGGAGCGCGACAAATGGAGGCGAAACTCAT
TCCGCACTTCACCACCGGC-----CC----------------CGTGCGCGGGTCA-----GTCCAACGCCACCCGGATCC
GATCTCATCGGATAGCTGCGTGCGTGCGTGCGTGCGCTCGCTGGACGGAGAACCCAGACGCGCTCGCTCCACCGGCCGCC
AGCCGGCCACGCAGTCCCATTACCCAGCT------------------------CCGCCCGCCGGTGAAAACGTCTCGGGA
TAAATCACACGCACTCAGACCAGCAGCAGTTCGGCGCCCCACCAAACATTCGTTCTCT---CCTCTCCCCGTCGCGTGGC
TCCGGCCACCGCGCCGCGCGTGCCGCGAGGCCATCCATCATCCCTCCAGCCAGT----------------------GGCG
ATGGACACGGCGGCCGCGGCGAGGCACCA---GCACCCGGCGCTGGGCGGGCGGCGGCGTAGGG---GGTGCCGCGGGGG
CGTGGCGTCCGTGCGGTGCTCCGGCTCGCCGGCGCAGGAGTTCGCGGCGCTGGCGTCGATGTTCCGGCGGCGGCTGGTGG
TGGGGGCGTCCACGGCGGCCGCGGCGGCCGTGGGGGCCAACTTCGGGGGCGTCACCAGCTTCCTCCTCGGCCTCTCCCCG
GAGCTCGGCCGCTCGCTCCGGCTCGACGTGCTCTACCCCGTCGGCGGCTTCACCCGCTGCCTCGACTCCGACAACGGATT
GGGTACTGACTTCCCCACCACCAGTAGCTTAGCTAGTTTTGCTTCTTCTGCTCGTTTGTCAACA----------------
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---------------------------------------------------------------------------GGCAA
CAATCATTCATGTATTCATGCTCTGTGACTGAGTGCATTTCTGAATTAGAATGCTTGCTGACAGCATTGGCAACTCAAGA
TTTGTTCAGAATGAGATTAGTAATCATACGCTTCACACCGAGACTTCTCTGAATGCACGTTTAGTCATTCACATTGACCG
GGTTGTCATGCTCAACTATTCGCACCGAGACTTCTCTGAGCGCACGTTTACAATGCTTGACACTGATAGAATTAGCAACT
CAAAGCATTTCTCAGAATAAAATTGGTAGTAGTAACCAGCCACGAAAGAGGAAAAA-TAAATGTGTTGATTTGAGAAAAG
CTGATTTGACTGGCATTCTGGCAAATTGGTGTTCGGTCCGGGTTGATGCTC--GCCATCAGCCACCAAATA-AAATTCAA
GGCAACCCTGCTTGTGCATGTTGCTATCAAGCTGCAACTTTGTGCCCCCACCAAAAAAGTACACAAACTAGTGATGCCAA
TTAGTTGTGGTGTGTTCACATCCCACCCACAGAAATATGAAGAAGAAAAACCGTATAATTCCTGAATTTCCTTTACTCAT
TCCATGCTCACTAGAG--AAAAAAAAAGGAAAAGTATATAATTCCAGAATTAGCCTAGTCTTTTAGTTCTTGTTGGTTCT
GGAATATGTCATTGGACCAATGGGCAAAGGGGCACACCTCAGTTTAGAGTTTAGACATCTCACTATATT--TTTTTTCTA
CAAAAAATTGAACCCTGTCCTTTGTGCCACAGATTAGCCTGCCTTTTTGTTCTGGTTGGTTCTGGAATATGACATCGAGG
GGAA--------CCTTCAGTTACACATTTCTCTATATTTTTTTCTACAGAAAAATGATGTTTGTCCTTTGTGGCACAAGC
ATGAGTGGCTACAAAAAATGTGGTCCTTGCAGCTACAATCTACTATACCCATCTGCTATGCCATGCCTCCAATGGGATTG
TATGGGTGGATTATGAGCTATCTGCTGCTGCCTTTAGGGCCAGGAGCTGAATGCCACATCTGCTCCATGTCAGCACGATT
GATCATTGATGGCATCTCGTGGCCGATTCTCAACAAGATAACATGTTTTGGGGGTTTCTTCTGTCGAATATTTTGATATT
TTCCCCGCTCTAGGACA-----------ATACGACGAGAGTGGATGCTTCCGAGC------------ATCGATAAGATTC
ATCATTTGCAATATGTTCTGTGAACTAGTACACA------------TATGCCAGATTATTAACTGTAATTTCTCTGAACT
CT---GTAGAATTCATCTATCCAGCAAATTGGGTTGGAGACCAGACAATACTATACAACCAAATTAAGAAAGCAGAGCTG
CAGAGATCACTAGACCCTCCGCCGTTGACAAATGGGGGTTCTTCATCTCGACCTCGGAACGTCAGTGGACCGGTGGCGGC
TTTTGGACCCCCGGGATCCAACGGGGAGCTCAATGTCAGCGTCATTGTATCAACCGTCCCTCAAGATTTCTCGTAAGTAT
ACTCATATGTCATTTCAGTTTCTTAATGAAATGTGCATTAGCACTTCTTTCCTAGCGTAAGCATTTTCCTACTGCTTAAA
TAGTATACTTCAGTTCTTGTATGAAACATGATCATAAGAAATCCGGTCACATTAACGAGTTACTATTTCACTCAAAATGA
GTAGAGTGCACCGCTAGTATGTCATAGTGTTCTCTAAAGTAGCATTGGAATGCTTGGAACAGGATCGAGTCTTTCGGCGG
CCCTAAAGATGTCGGGCAAGTGGTGCTGAGGAGGATCGCAAGGACAAAGCGAAACCCGGACATCAGCGCCACTCTGATCG
GTGCCGCGTTGAGAGAGGACACCGTGAACAATGTGAAATACTACAAGCTGGAATTCCGAGTCGAAAGCCCATCATTTCGG
CGGCACAATGTGGCGGTGTGCTGCGCGAGAGACGGCAAACTGTACACCTTGAATGCCCAGGCACCCGAGTCGGCATGGAG
GTCGGTTAAGGAAGAGTTCTTTGCCATGGCGGATTCCTTCAGCCTAGTGATCGATGTTTGATCTTGTAGATAAACAGTTT
TGTACCCGT-----------------------------------------------GTCGGTCATGGTCTCGTTTAGCCG
AGGAGTAAA-TGTAACATAAATAAATGTT--------------------TTTTGTATCATGATGTTCTTGGTGACATCCA
TGTCTGAAGAACTTCCCTAGCAAGGTCTGGGCGT-----AAGGTTTTGTCAAGTAGAGGAGAAATGCAACAAAAATGAT-
CTGTACCATAATCTTCTTGTTACACATATGTATGCACTTTTCTTTTGGACAGAGAATGTATTCATATTTGATGATATGCA
GTCAG--------AATCAGACATCTCTCGAATTCTCCGAAGAATTAT-------TCAGAATTCATAACTGAACATGAAGT
TTGCTGGTTCAAG--------TGTACTTGTTGGCTATCTCCAGGAGGAGGTCCGAGAGCTCCCTGGGCTTGGAGAACATG
GGCATGTGATCGGCCCCCTGGAGCCCCCTCACCTCCGTGCCGGGGTTCCACGACGCCATCCGCAGCTGGAACTCCGGCGA
CCACGAGGCGTCCTCCTCGGCGAGCACGTACACGCGGCTCACCGCGCCGTACCTCTCCGCCGTCAGTACCCCCTCCCCGC
TCATCGCGGCGTCGTCCACGAACTGCCGCGACGGCCTCACCAGCATCGTCGCCAGCGTCAGGTCCTCGGGCGGGCTGAGC
TGGTACAGCCGCTGCGCCATGTACTCCGGCCCAGGGGCGGAGCCAGCGCCCGGCCAGCCTGGGCACTTGCCCGGGCTCGA
TGCCTATGCGTACGCTGTACGATGTCCTGCGATAGCTGAAAAAATTGACGTACGGACCGTGATTTCCCGGGCAGAATTGT
GTTGGGCCGGCTTCGTTTGGTAATGGGCTTTGTAAGAGCTAGGCCTAGCAAGCCACGTTCTGCTGTCGGTTAATCGCTAG
GTTGACGCACGCACGTTCGGCTGTTGGTTAATCGATGTTTCTATTTGCTGATCGCTCGCCTCCACCTGCGCTGTTCGGCT
TCGACTGCCTATCGCGCGAAAACAGACTGGCGGCGGCGGCCGGAGGCTGGCCTTGGCCTCGGAGCGCGGCTGGCGGCGGG
ATGAGTGGATCTGTCCCGGGGGAGGCAGGAACGGCTTGCAACCTTGCCTACTCGTTCTTTCCTTCGTAATCAGATTAAGT
AAGATTGCTAACTGATGTGCCTATCCACACATGTAGGTCAACCTGTTGAAATTTATTCAAGCTAGATCATGATAAAAATA
GTATTCGAACATTCATCGCAACCAATTATCACAAATTACATCTGCCTCGTGATTTTCTTTAACACACTATTCTATGTTCC
ATTTATTCCTACAAGCTCTGAATTTATGTGAACTCCGAATCTGTTTTTTATATTGTACTCCCTCCGTAAAGAAATATAAG
AGCGTTTGGATTACTAAAGTAGTGATCTAAATATTCTTATATTCCTTTACAGAGAGAGTAATATTTTTTTAGGACATTTG
GATGGTAATTTGGATAGCTATACTTTTGCGTGGAATGAGGTTAGTTTGCGAAAGTGCTCTTTTGATCCCGAGCTCATAGC
TCCTGCATGAACAGTAAAATTCAAAAAAATAGTAAAAGTTTAAAAAAAAATCTGATTTTTTTTGTGATGAACATGATGAA
TATTCTAACTGCGTGCAAAGTTTTAGGTTGAAATGACATTCGTGGAGGTCTGGGCAAAAATAACAAAATCGATGCTCCAA
AATGCTTCCAACAATAGTTTTTTTGGACCATCGATTTTAATATTTTTACCTAGACCTCCACGAATGTCAACCTGAAATTT
TGCACGCAGTTAGAAAATCCATCAATGTTCATCACAAAAAAATCAGATTTTTTGAAAAAAATTTACTATTTTTTTGGATT
GTACTGTTCATGCGGGAGCATGTGAGCTCGGGATCAAATACTCCATGTCCGCTGGCCTGCTTCTATGACTTTCATTGTCA
AGTCTCAAATTCATTTTGGTCTATGAAACTGAATATCGATATGTTACATATTAGTCCACTTTGAAACTATATTTTTATGA
CCTTGTTTTTAAATTCGTTTTTTTTTGTTATTAATGATTTCTGGTAACGAAGTTCGGGGCTATTTTATATGTTGTATCTA
TCAGAACATCACATTTTAATTTCGACATTAGACACATAGGCTCAAGCTTGCCCAGGCTCTAGAAAAGTTCTGGCTCCGCG
ACTGCTCCGGCCCGAGCAGGAACGTCTTGCAAGGGCGTTGCGGGTCGTCGCCGGAGGTGGTCTCGATCACGCTGTCCATG
AAGAAACCCGGGCCCCTTTCTTGCGCGAACTGTAATATCGAG--------TGTGTTAGGTTCGTTCATGGTGGGGGAGAA
GAGGTGTGGATCGAGTGGGCGCGCGCG---GGGCTCACCTGTTCAGAGACGAACTTGAGGGGCTTCCCGGCGGCCGGCAT
GGCGGCGGAGGCGAAGGCGGC-------------
>SNPs
SSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--------------------------------------------------SSSS--S----------S-----------
---------S----------------------S---SS-S-----S-S--------------------------------
--------------------------SSSSSSSSSSSSSSSS------------SSSSSS--------------------
------S--------------------------------------------S----------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------S---SS-S----S-SSS--S------------S---
---------------------------SSSSSSSSS-S--SS--SS-S-SSS-SSSSSSSSSSSSSSSSSSSSSSS----
------------------S----------SSS------------------SS------------SSS-------------
---------------------S----------------------------------------------------------
----------------------S---------------------------------------------------------
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------S--------------------------------------------------S----------------------
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------------------------------------------------------S--S----------------------
--------------------S-------------S---------------------------------------------
------S------------------S-------S---S-S----------------------------------------
-S-----S---------------------S--------------------------S-----------------------
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----------S------------------------------S-----------------S--------------------
----S-----------------------------------------------S--------------------------S
---S------------SS----S----S-----SS---------------------------------------------
--------------------------------------------------------------------SSS---------
---S---------------------------------------S------------------------------------
------------------------------S--S-------------------------S------------------S-
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-S-----------------------------S--------------------------------------------S---
-----------------------S---------------------------SS---S----S--S---------------
-------------------------------S-S----------------------------------------------
-----S-------------S----S--S-SSSSSSSSSS--S-SS--------------------S--S-----------
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--------------SSS-------------------------------------------------S-----S-------
----------------------S----------S---S-SSSSS--------S-S-SS----S-------S-S-------
--SS-S--S-SS--S-S--------------S------------------------------------------------
------------S-----------------S-----------------S--S-----S--S-----S--S-----S--S-
----S--------------------------------------------------------------------S------
-----------------S-----------------------------------------------S--------------
S---------------------------------------------S--S-S----------------------------
----------------------SSS----------S----------S--S---SSS--------------SS-------S
------S-------------------S-----------------------S-SSSS---------------------S--
-------------SS----SS-SS--SSS--S-SSSSSS--------------SSS-S-------SS----S-------S
---S-S------S--S----------S--S----S----S-SS-------------SS-----S----S------SSSSS
-SSSSSSSSSSSS--S--S--------S--S-----S----------SSSSSSS--------------------------
------S-SSSSS-S-----------------------------------------------------------------
------------------SSS-----------------------------------------------------------
-------S---------------S--S---------------------------------------S-------------
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------------------------------------------SSSSSSSS-----------------------S-SS---
---------S----------S----S------S-----------------------------------------------
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>forward_143
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-------------------------------------------GACCAACACGAACAGGCAAC-----------------
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>reverse_1798
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-------------------------------------CACCGCACGTTTACAATGCT-----------------------
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>forward_391
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---------------------------------------------------ACGGTTGGTCACGCACATAT---------
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>reverse_2592
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-------------------------------GTTTAGGGCCAGGAGCTGAA-----------------------------
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>forward_424
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----ATAGACCGGCCGAAAGTTGG--------------------------------------------------------
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>reverse_2637
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----------------------------------------------------------------------------CACT
GATCATTGATGGCATCTCG-------------------------------------------------------------
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>forward_1035
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-------------------------------------------------------GCAATCCTTCCCGTTCCACT-----
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>reverse_2697
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--------------------------------------------------------CCTTCCGTGGAATGTTTTCCC---
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>forward_2178
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------------------------------------------------------------------------------AC
TCCCTGCTCACTAGAGGA--------------------------------------------------------------
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>reverse_3727
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----------------------------------------------TTTCGCTCCGGTAGGTCATG--------------
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----------------------------------
