Multiple sequence alignment - TraesCS3A01G445300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G445300 chr3A 100.000 2990 0 0 1 2990 686253065 686256054 0.000000e+00 5522.0
1 TraesCS3A01G445300 chr3A 81.696 448 60 18 2473 2914 686419994 686420425 1.320000e-93 353.0
2 TraesCS3A01G445300 chr3A 81.696 448 59 19 2473 2914 686487062 686487492 4.740000e-93 351.0
3 TraesCS3A01G445300 chr3A 86.047 129 18 0 1049 1177 686158185 686158057 4.020000e-29 139.0
4 TraesCS3A01G445300 chr3A 85.271 129 19 0 1049 1177 686162876 686162748 1.870000e-27 134.0
5 TraesCS3A01G445300 chr3A 80.233 172 29 3 443 613 710797737 710797904 1.130000e-24 124.0
6 TraesCS3A01G445300 chr3A 79.851 134 22 5 470 602 648495267 648495138 3.170000e-15 93.5
7 TraesCS3A01G445300 chr3D 93.480 1641 71 8 607 2227 548964743 548966367 0.000000e+00 2405.0
8 TraesCS3A01G445300 chr3D 91.837 343 16 6 2476 2814 548966378 548966712 4.510000e-128 468.0
9 TraesCS3A01G445300 chr3D 82.609 529 62 20 2473 2988 549042745 549043256 9.840000e-120 440.0
10 TraesCS3A01G445300 chr3D 81.310 519 44 21 1205 1723 45043499 45043034 3.640000e-99 372.0
11 TraesCS3A01G445300 chr3D 96.721 183 6 0 2806 2988 548971912 548972094 3.740000e-79 305.0
12 TraesCS3A01G445300 chr3D 95.614 114 5 0 2219 2332 339050069 339050182 1.830000e-42 183.0
13 TraesCS3A01G445300 chr3D 90.244 123 4 3 2355 2477 138182858 138182972 1.440000e-33 154.0
14 TraesCS3A01G445300 chr3D 80.838 167 25 5 444 608 578054040 578053879 1.130000e-24 124.0
15 TraesCS3A01G445300 chr3D 83.333 132 22 0 1046 1177 548674811 548674680 4.050000e-24 122.0
16 TraesCS3A01G445300 chr3D 96.078 51 2 0 2938 2988 548972116 548972166 1.910000e-12 84.2
17 TraesCS3A01G445300 chr3B 91.822 1394 65 18 664 2033 728198845 728200213 0.000000e+00 1897.0
18 TraesCS3A01G445300 chr3B 82.239 518 47 20 2474 2990 728200462 728200935 3.590000e-109 405.0
19 TraesCS3A01G445300 chr3B 90.367 218 21 0 2473 2690 728457296 728457513 1.360000e-73 287.0
20 TraesCS3A01G445300 chr7D 87.574 507 36 4 1215 1721 72914391 72914870 2.010000e-156 562.0
21 TraesCS3A01G445300 chr7D 85.970 335 31 7 1205 1539 153764353 153764035 7.940000e-91 344.0
22 TraesCS3A01G445300 chr7D 83.333 192 28 4 143 331 135826503 135826313 1.100000e-39 174.0
23 TraesCS3A01G445300 chr6D 87.574 507 36 4 1215 1721 38539612 38540091 2.010000e-156 562.0
24 TraesCS3A01G445300 chr6D 81.703 317 35 11 14 329 14499679 14499385 2.980000e-60 243.0
25 TraesCS3A01G445300 chr6D 87.805 123 10 3 2354 2476 457677710 457677827 4.020000e-29 139.0
26 TraesCS3A01G445300 chr5D 86.373 499 41 4 1215 1713 51641010 51641481 1.230000e-143 520.0
27 TraesCS3A01G445300 chr5D 86.875 160 20 1 1251 1410 486765595 486765437 8.520000e-41 178.0
28 TraesCS3A01G445300 chr5D 90.840 131 7 4 2355 2482 477331916 477332044 1.430000e-38 171.0
29 TraesCS3A01G445300 chr5D 82.682 179 28 1 430 608 385981895 385982070 3.990000e-34 156.0
30 TraesCS3A01G445300 chr6B 86.207 377 45 3 1223 1593 103849822 103850197 4.640000e-108 401.0
31 TraesCS3A01G445300 chr6B 92.623 122 8 1 2213 2333 548122340 548122219 1.100000e-39 174.0
32 TraesCS3A01G445300 chr2B 81.696 519 42 19 1205 1723 132336202 132336667 1.680000e-102 383.0
33 TraesCS3A01G445300 chr2B 91.057 123 7 3 2354 2476 777494907 777495025 2.380000e-36 163.0
34 TraesCS3A01G445300 chr2B 90.400 125 9 2 2352 2476 534232619 534232740 8.580000e-36 161.0
35 TraesCS3A01G445300 chr2B 87.903 124 10 4 2354 2476 534232741 534232622 1.120000e-29 141.0
36 TraesCS3A01G445300 chr7A 86.970 330 34 8 1 329 134958999 134958678 2.190000e-96 363.0
37 TraesCS3A01G445300 chr7B 86.765 272 28 7 14 284 598183290 598183554 2.250000e-76 296.0
38 TraesCS3A01G445300 chr7B 84.921 252 31 5 14 262 598183610 598183857 6.400000e-62 248.0
39 TraesCS3A01G445300 chr2A 93.496 123 7 1 2223 2344 65514456 65514334 6.580000e-42 182.0
40 TraesCS3A01G445300 chr2A 94.828 116 6 0 2219 2334 78333822 78333707 6.580000e-42 182.0
41 TraesCS3A01G445300 chr4A 94.118 119 6 1 2216 2334 281354421 281354304 2.370000e-41 180.0
42 TraesCS3A01G445300 chr4A 93.333 120 7 1 2214 2332 90353252 90353371 3.060000e-40 176.0
43 TraesCS3A01G445300 chr6A 92.683 123 7 2 2219 2340 475435048 475435169 3.060000e-40 176.0
44 TraesCS3A01G445300 chr6A 92.000 125 9 1 2209 2332 477910754 477910878 1.100000e-39 174.0
45 TraesCS3A01G445300 chr1A 90.769 130 10 2 2209 2337 376756217 376756345 3.960000e-39 172.0
46 TraesCS3A01G445300 chr5A 91.057 123 6 3 2355 2477 624724324 624724207 8.580000e-36 161.0
47 TraesCS3A01G445300 chr5A 88.095 126 11 3 2353 2476 7813738 7813861 2.400000e-31 147.0
48 TraesCS3A01G445300 chrUn 86.567 134 15 1 475 608 27337297 27337427 8.640000e-31 145.0
49 TraesCS3A01G445300 chr1D 86.885 122 11 3 2355 2476 3824266 3824150 6.730000e-27 132.0
50 TraesCS3A01G445300 chr1D 100.000 29 0 0 246 274 180954459 180954431 1.000000e-03 54.7
51 TraesCS3A01G445300 chr1B 80.000 170 30 2 440 608 323960876 323961042 4.050000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G445300 chr3A 686253065 686256054 2989 False 5522.0 5522 100.0000 1 2990 1 chr3A.!!$F1 2989
1 TraesCS3A01G445300 chr3D 548964743 548966712 1969 False 1436.5 2405 92.6585 607 2814 2 chr3D.!!$F4 2207
2 TraesCS3A01G445300 chr3D 549042745 549043256 511 False 440.0 440 82.6090 2473 2988 1 chr3D.!!$F3 515
3 TraesCS3A01G445300 chr3B 728198845 728200935 2090 False 1151.0 1897 87.0305 664 2990 2 chr3B.!!$F2 2326
4 TraesCS3A01G445300 chr7B 598183290 598183857 567 False 272.0 296 85.8430 14 284 2 chr7B.!!$F1 270

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
515 801 0.036483 TAGATGCACGCTCAAGCCAA 60.036 50.0 0.0 0.0 37.91 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 2577 0.247736 AGGATGAGCCACACGACTTC 59.752 55.0 0.0 0.0 40.02 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
212 214 9.097257 CTGGTTTTCAAATTATTGTTCACAACT 57.903 29.630 0.00 0.00 38.86 3.16
213 215 9.442047 TGGTTTTCAAATTATTGTTCACAACTT 57.558 25.926 0.00 0.00 38.86 2.66
226 228 7.962934 TGTTCACAACTTAAGAAAATGTTCG 57.037 32.000 10.09 0.00 38.90 3.95
278 564 2.757686 TGTTCGCGTTTGCAACATTA 57.242 40.000 5.77 0.00 42.97 1.90
289 575 6.524490 CGTTTGCAACATTATGTTCCAAATC 58.476 36.000 24.18 17.66 45.98 2.17
290 576 6.524490 GTTTGCAACATTATGTTCCAAATCG 58.476 36.000 24.18 7.49 45.98 3.34
292 578 4.172505 GCAACATTATGTTCCAAATCGCA 58.827 39.130 7.71 0.00 38.77 5.10
293 579 4.624882 GCAACATTATGTTCCAAATCGCAA 59.375 37.500 7.71 0.00 38.77 4.85
294 580 5.119898 GCAACATTATGTTCCAAATCGCAAA 59.880 36.000 7.71 0.00 38.77 3.68
295 581 6.347240 GCAACATTATGTTCCAAATCGCAAAA 60.347 34.615 7.71 0.00 38.77 2.44
296 582 7.571026 CAACATTATGTTCCAAATCGCAAAAA 58.429 30.769 7.71 0.00 38.77 1.94
321 607 9.889128 AAATGTCCCCATGTTTCTAAATTTATG 57.111 29.630 0.00 0.00 0.00 1.90
322 608 8.608185 ATGTCCCCATGTTTCTAAATTTATGT 57.392 30.769 0.00 0.00 0.00 2.29
323 609 8.429237 TGTCCCCATGTTTCTAAATTTATGTT 57.571 30.769 0.00 0.00 0.00 2.71
324 610 8.527810 TGTCCCCATGTTTCTAAATTTATGTTC 58.472 33.333 0.00 0.00 0.00 3.18
325 611 8.527810 GTCCCCATGTTTCTAAATTTATGTTCA 58.472 33.333 0.00 0.00 0.00 3.18
326 612 9.094578 TCCCCATGTTTCTAAATTTATGTTCAA 57.905 29.630 0.00 0.00 0.00 2.69
327 613 9.717942 CCCCATGTTTCTAAATTTATGTTCAAA 57.282 29.630 0.00 0.00 0.00 2.69
353 639 9.829507 AAAACAATTTGAGGTGATTATTTGTGA 57.170 25.926 2.79 0.00 0.00 3.58
354 640 9.480053 AAACAATTTGAGGTGATTATTTGTGAG 57.520 29.630 2.79 0.00 0.00 3.51
355 641 8.408043 ACAATTTGAGGTGATTATTTGTGAGA 57.592 30.769 2.79 0.00 0.00 3.27
356 642 8.859090 ACAATTTGAGGTGATTATTTGTGAGAA 58.141 29.630 2.79 0.00 0.00 2.87
357 643 9.695526 CAATTTGAGGTGATTATTTGTGAGAAA 57.304 29.630 0.00 0.00 0.00 2.52
408 694 2.086610 AAAAACAGGTCACATGCCCT 57.913 45.000 0.00 0.00 0.00 5.19
411 697 2.759114 CAGGTCACATGCCCTGGT 59.241 61.111 15.54 0.00 43.74 4.00
412 698 1.377725 CAGGTCACATGCCCTGGTC 60.378 63.158 15.54 0.00 43.74 4.02
413 699 1.847506 AGGTCACATGCCCTGGTCA 60.848 57.895 0.00 0.00 0.00 4.02
414 700 1.675641 GGTCACATGCCCTGGTCAC 60.676 63.158 0.00 0.00 0.00 3.67
415 701 1.376466 GTCACATGCCCTGGTCACT 59.624 57.895 0.00 0.00 0.00 3.41
416 702 0.957395 GTCACATGCCCTGGTCACTG 60.957 60.000 0.00 0.00 0.00 3.66
417 703 2.034687 ACATGCCCTGGTCACTGC 59.965 61.111 0.00 0.00 0.00 4.40
418 704 2.753043 CATGCCCTGGTCACTGCC 60.753 66.667 0.00 0.00 0.00 4.85
419 705 2.937689 ATGCCCTGGTCACTGCCT 60.938 61.111 0.00 0.00 0.00 4.75
420 706 2.976490 ATGCCCTGGTCACTGCCTC 61.976 63.158 0.00 0.00 0.00 4.70
421 707 4.416738 GCCCTGGTCACTGCCTCC 62.417 72.222 0.00 0.00 0.00 4.30
422 708 3.721706 CCCTGGTCACTGCCTCCC 61.722 72.222 0.00 0.00 0.00 4.30
423 709 2.608988 CCTGGTCACTGCCTCCCT 60.609 66.667 0.00 0.00 0.00 4.20
424 710 2.667418 CTGGTCACTGCCTCCCTG 59.333 66.667 0.00 0.00 0.00 4.45
425 711 1.915266 CTGGTCACTGCCTCCCTGA 60.915 63.158 0.00 0.00 0.00 3.86
426 712 1.229625 TGGTCACTGCCTCCCTGAT 60.230 57.895 0.00 0.00 0.00 2.90
427 713 1.222936 GGTCACTGCCTCCCTGATG 59.777 63.158 0.00 0.00 0.00 3.07
428 714 1.222936 GTCACTGCCTCCCTGATGG 59.777 63.158 0.00 0.00 0.00 3.51
445 731 2.836360 GGTGGGCCCTGCATCATG 60.836 66.667 25.70 0.00 0.00 3.07
446 732 3.534056 GTGGGCCCTGCATCATGC 61.534 66.667 25.70 1.35 45.29 4.06
447 733 3.746436 TGGGCCCTGCATCATGCT 61.746 61.111 25.70 0.00 45.31 3.79
448 734 3.224324 GGGCCCTGCATCATGCTG 61.224 66.667 17.04 10.59 45.31 4.41
453 739 3.023118 CTGCATCATGCTGGCTCG 58.977 61.111 11.84 0.00 45.31 5.03
454 740 3.182472 CTGCATCATGCTGGCTCGC 62.182 63.158 11.84 0.00 45.31 5.03
455 741 3.962421 GCATCATGCTGGCTCGCC 61.962 66.667 1.02 0.00 40.96 5.54
456 742 2.515290 CATCATGCTGGCTCGCCA 60.515 61.111 10.64 10.64 45.02 5.69
457 743 2.515523 ATCATGCTGGCTCGCCAC 60.516 61.111 6.52 5.17 41.89 5.01
458 744 3.333899 ATCATGCTGGCTCGCCACA 62.334 57.895 6.52 10.59 41.89 4.17
459 745 2.619941 ATCATGCTGGCTCGCCACAT 62.620 55.000 6.52 12.30 41.89 3.21
460 746 2.515523 ATGCTGGCTCGCCACATC 60.516 61.111 6.52 0.18 41.89 3.06
461 747 3.333899 ATGCTGGCTCGCCACATCA 62.334 57.895 6.52 5.95 41.89 3.07
462 748 2.747460 GCTGGCTCGCCACATCAA 60.747 61.111 6.52 0.00 41.89 2.57
463 749 3.044059 GCTGGCTCGCCACATCAAC 62.044 63.158 6.52 0.00 41.89 3.18
464 750 1.672030 CTGGCTCGCCACATCAACA 60.672 57.895 6.52 0.00 41.89 3.33
465 751 1.915614 CTGGCTCGCCACATCAACAC 61.916 60.000 6.52 0.00 41.89 3.32
466 752 2.476051 GCTCGCCACATCAACACG 59.524 61.111 0.00 0.00 0.00 4.49
467 753 2.027073 GCTCGCCACATCAACACGA 61.027 57.895 0.00 0.00 0.00 4.35
468 754 1.361668 GCTCGCCACATCAACACGAT 61.362 55.000 0.00 0.00 33.27 3.73
482 768 6.822073 TCAACACGATGTACATATACAAGC 57.178 37.500 8.71 0.00 44.47 4.01
483 769 5.457473 TCAACACGATGTACATATACAAGCG 59.543 40.000 8.71 8.72 44.47 4.68
486 772 4.295870 ACGATGTACATATACAAGCGTGG 58.704 43.478 8.71 0.00 46.08 4.94
487 773 4.202080 ACGATGTACATATACAAGCGTGGT 60.202 41.667 8.71 0.00 46.08 4.16
488 774 4.743151 CGATGTACATATACAAGCGTGGTT 59.257 41.667 8.71 0.00 44.47 3.67
489 775 5.916320 CGATGTACATATACAAGCGTGGTTA 59.084 40.000 8.71 0.00 44.47 2.85
490 776 6.418523 CGATGTACATATACAAGCGTGGTTAA 59.581 38.462 8.71 0.00 44.47 2.01
491 777 6.890663 TGTACATATACAAGCGTGGTTAAC 57.109 37.500 4.26 0.00 38.40 2.01
492 778 6.396450 TGTACATATACAAGCGTGGTTAACA 58.604 36.000 8.10 0.00 38.40 2.41
493 779 5.789710 ACATATACAAGCGTGGTTAACAC 57.210 39.130 8.10 3.28 46.78 3.32
494 780 8.529697 TGTACATATACAAGCGTGGTTAACACC 61.530 40.741 8.10 0.00 41.50 4.16
505 791 1.657094 GGTTAACACCGTAGATGCACG 59.343 52.381 8.10 0.00 41.59 5.34
506 792 1.060122 GTTAACACCGTAGATGCACGC 59.940 52.381 0.00 0.00 40.59 5.34
507 793 0.528924 TAACACCGTAGATGCACGCT 59.471 50.000 0.00 0.00 40.59 5.07
508 794 0.736325 AACACCGTAGATGCACGCTC 60.736 55.000 0.00 0.00 40.59 5.03
509 795 1.153842 CACCGTAGATGCACGCTCA 60.154 57.895 0.00 0.00 40.59 4.26
510 796 0.735978 CACCGTAGATGCACGCTCAA 60.736 55.000 0.00 0.00 40.59 3.02
511 797 0.458543 ACCGTAGATGCACGCTCAAG 60.459 55.000 0.00 0.00 40.59 3.02
512 798 1.633171 CGTAGATGCACGCTCAAGC 59.367 57.895 0.00 0.00 34.78 4.01
513 799 1.756375 CGTAGATGCACGCTCAAGCC 61.756 60.000 0.00 0.00 37.91 4.35
514 800 0.740868 GTAGATGCACGCTCAAGCCA 60.741 55.000 0.00 0.00 37.91 4.75
515 801 0.036483 TAGATGCACGCTCAAGCCAA 60.036 50.000 0.00 0.00 37.91 4.52
516 802 0.890542 AGATGCACGCTCAAGCCAAA 60.891 50.000 0.00 0.00 37.91 3.28
517 803 0.171903 GATGCACGCTCAAGCCAAAT 59.828 50.000 0.00 0.00 37.91 2.32
518 804 0.604578 ATGCACGCTCAAGCCAAATT 59.395 45.000 0.00 0.00 37.91 1.82
519 805 0.388659 TGCACGCTCAAGCCAAATTT 59.611 45.000 0.00 0.00 37.91 1.82
520 806 1.202510 TGCACGCTCAAGCCAAATTTT 60.203 42.857 0.00 0.00 37.91 1.82
521 807 2.035193 TGCACGCTCAAGCCAAATTTTA 59.965 40.909 0.00 0.00 37.91 1.52
522 808 3.253230 GCACGCTCAAGCCAAATTTTAT 58.747 40.909 0.00 0.00 37.91 1.40
523 809 3.304293 GCACGCTCAAGCCAAATTTTATC 59.696 43.478 0.00 0.00 37.91 1.75
524 810 4.484236 CACGCTCAAGCCAAATTTTATCA 58.516 39.130 0.00 0.00 37.91 2.15
525 811 4.324402 CACGCTCAAGCCAAATTTTATCAC 59.676 41.667 0.00 0.00 37.91 3.06
526 812 3.859386 CGCTCAAGCCAAATTTTATCACC 59.141 43.478 0.00 0.00 37.91 4.02
527 813 3.859386 GCTCAAGCCAAATTTTATCACCG 59.141 43.478 0.00 0.00 34.31 4.94
528 814 4.380444 GCTCAAGCCAAATTTTATCACCGA 60.380 41.667 0.00 0.00 34.31 4.69
529 815 5.679638 GCTCAAGCCAAATTTTATCACCGAT 60.680 40.000 0.00 0.00 34.31 4.18
530 816 6.279513 TCAAGCCAAATTTTATCACCGATT 57.720 33.333 0.00 0.00 0.00 3.34
531 817 6.329496 TCAAGCCAAATTTTATCACCGATTC 58.671 36.000 0.00 0.00 0.00 2.52
532 818 4.920376 AGCCAAATTTTATCACCGATTCG 58.080 39.130 0.00 0.00 0.00 3.34
533 819 4.638421 AGCCAAATTTTATCACCGATTCGA 59.362 37.500 7.83 0.00 0.00 3.71
534 820 5.299279 AGCCAAATTTTATCACCGATTCGAT 59.701 36.000 7.83 0.00 0.00 3.59
535 821 5.399301 GCCAAATTTTATCACCGATTCGATG 59.601 40.000 7.83 0.00 0.00 3.84
536 822 6.494842 CCAAATTTTATCACCGATTCGATGT 58.505 36.000 7.83 0.00 0.00 3.06
537 823 7.635423 CCAAATTTTATCACCGATTCGATGTA 58.365 34.615 7.83 0.00 0.00 2.29
538 824 7.586300 CCAAATTTTATCACCGATTCGATGTAC 59.414 37.037 7.83 0.00 0.00 2.90
539 825 8.335356 CAAATTTTATCACCGATTCGATGTACT 58.665 33.333 7.83 0.00 0.00 2.73
540 826 9.537192 AAATTTTATCACCGATTCGATGTACTA 57.463 29.630 7.83 0.00 0.00 1.82
541 827 9.706691 AATTTTATCACCGATTCGATGTACTAT 57.293 29.630 7.83 0.00 0.00 2.12
542 828 8.515473 TTTTATCACCGATTCGATGTACTATG 57.485 34.615 7.83 0.00 0.00 2.23
543 829 3.897325 TCACCGATTCGATGTACTATGC 58.103 45.455 7.83 0.00 0.00 3.14
544 830 2.987149 CACCGATTCGATGTACTATGCC 59.013 50.000 7.83 0.00 0.00 4.40
545 831 2.251040 CCGATTCGATGTACTATGCCG 58.749 52.381 7.83 0.00 0.00 5.69
546 832 2.351447 CCGATTCGATGTACTATGCCGT 60.351 50.000 7.83 0.00 0.00 5.68
547 833 3.120095 CCGATTCGATGTACTATGCCGTA 60.120 47.826 7.83 0.00 0.00 4.02
548 834 4.469552 CGATTCGATGTACTATGCCGTAA 58.530 43.478 0.00 0.00 0.00 3.18
549 835 4.553815 CGATTCGATGTACTATGCCGTAAG 59.446 45.833 0.00 0.00 0.00 2.34
550 836 4.906065 TTCGATGTACTATGCCGTAAGT 57.094 40.909 0.00 0.00 0.00 2.24
551 837 4.906065 TCGATGTACTATGCCGTAAGTT 57.094 40.909 0.00 0.00 0.00 2.66
552 838 5.252969 TCGATGTACTATGCCGTAAGTTT 57.747 39.130 0.00 0.00 0.00 2.66
553 839 5.653507 TCGATGTACTATGCCGTAAGTTTT 58.346 37.500 0.00 0.00 0.00 2.43
554 840 6.794374 TCGATGTACTATGCCGTAAGTTTTA 58.206 36.000 0.00 0.00 0.00 1.52
555 841 6.914215 TCGATGTACTATGCCGTAAGTTTTAG 59.086 38.462 0.00 0.00 0.00 1.85
556 842 6.345565 CGATGTACTATGCCGTAAGTTTTAGC 60.346 42.308 0.00 0.00 0.00 3.09
557 843 5.722263 TGTACTATGCCGTAAGTTTTAGCA 58.278 37.500 0.00 0.00 37.94 3.49
558 844 5.577945 TGTACTATGCCGTAAGTTTTAGCAC 59.422 40.000 0.00 0.00 36.06 4.40
559 845 3.937079 ACTATGCCGTAAGTTTTAGCACC 59.063 43.478 0.00 0.00 36.06 5.01
560 846 2.257691 TGCCGTAAGTTTTAGCACCA 57.742 45.000 0.00 0.00 0.00 4.17
561 847 2.573369 TGCCGTAAGTTTTAGCACCAA 58.427 42.857 0.00 0.00 0.00 3.67
562 848 2.950309 TGCCGTAAGTTTTAGCACCAAA 59.050 40.909 0.00 0.00 0.00 3.28
563 849 3.243134 TGCCGTAAGTTTTAGCACCAAAC 60.243 43.478 0.00 0.00 34.80 2.93
564 850 3.004002 GCCGTAAGTTTTAGCACCAAACT 59.996 43.478 2.91 2.91 44.67 2.66
565 851 4.533222 CCGTAAGTTTTAGCACCAAACTG 58.467 43.478 8.26 0.00 42.47 3.16
566 852 4.273969 CCGTAAGTTTTAGCACCAAACTGA 59.726 41.667 8.26 0.00 42.47 3.41
567 853 5.048991 CCGTAAGTTTTAGCACCAAACTGAT 60.049 40.000 8.26 0.00 42.47 2.90
568 854 6.435428 CGTAAGTTTTAGCACCAAACTGATT 58.565 36.000 8.26 0.00 42.47 2.57
569 855 6.915843 CGTAAGTTTTAGCACCAAACTGATTT 59.084 34.615 8.26 0.00 42.47 2.17
570 856 7.434013 CGTAAGTTTTAGCACCAAACTGATTTT 59.566 33.333 8.26 0.00 42.47 1.82
571 857 9.093970 GTAAGTTTTAGCACCAAACTGATTTTT 57.906 29.630 8.26 0.00 42.47 1.94
572 858 7.770801 AGTTTTAGCACCAAACTGATTTTTC 57.229 32.000 7.03 0.00 41.86 2.29
573 859 7.555965 AGTTTTAGCACCAAACTGATTTTTCT 58.444 30.769 7.03 0.00 41.86 2.52
574 860 8.040727 AGTTTTAGCACCAAACTGATTTTTCTT 58.959 29.630 7.03 0.00 41.86 2.52
575 861 8.664798 GTTTTAGCACCAAACTGATTTTTCTTT 58.335 29.630 0.00 0.00 32.32 2.52
576 862 8.785329 TTTAGCACCAAACTGATTTTTCTTTT 57.215 26.923 0.00 0.00 0.00 2.27
577 863 6.908870 AGCACCAAACTGATTTTTCTTTTC 57.091 33.333 0.00 0.00 0.00 2.29
578 864 6.405538 AGCACCAAACTGATTTTTCTTTTCA 58.594 32.000 0.00 0.00 0.00 2.69
579 865 6.878389 AGCACCAAACTGATTTTTCTTTTCAA 59.122 30.769 0.00 0.00 0.00 2.69
580 866 7.064966 AGCACCAAACTGATTTTTCTTTTCAAG 59.935 33.333 0.00 0.00 0.00 3.02
581 867 7.148423 GCACCAAACTGATTTTTCTTTTCAAGT 60.148 33.333 0.00 0.00 0.00 3.16
582 868 8.720562 CACCAAACTGATTTTTCTTTTCAAGTT 58.279 29.630 0.00 0.00 0.00 2.66
583 869 8.935844 ACCAAACTGATTTTTCTTTTCAAGTTC 58.064 29.630 0.00 0.00 0.00 3.01
584 870 8.934825 CCAAACTGATTTTTCTTTTCAAGTTCA 58.065 29.630 0.00 0.00 0.00 3.18
585 871 9.962759 CAAACTGATTTTTCTTTTCAAGTTCAG 57.037 29.630 0.00 0.00 35.40 3.02
586 872 8.707938 AACTGATTTTTCTTTTCAAGTTCAGG 57.292 30.769 0.00 0.00 33.97 3.86
587 873 6.758416 ACTGATTTTTCTTTTCAAGTTCAGGC 59.242 34.615 0.00 0.00 33.97 4.85
588 874 6.638610 TGATTTTTCTTTTCAAGTTCAGGCA 58.361 32.000 0.00 0.00 0.00 4.75
589 875 6.534793 TGATTTTTCTTTTCAAGTTCAGGCAC 59.465 34.615 0.00 0.00 0.00 5.01
590 876 4.385358 TTTCTTTTCAAGTTCAGGCACC 57.615 40.909 0.00 0.00 0.00 5.01
591 877 3.297134 TCTTTTCAAGTTCAGGCACCT 57.703 42.857 0.00 0.00 0.00 4.00
592 878 2.951642 TCTTTTCAAGTTCAGGCACCTG 59.048 45.455 10.60 10.60 44.86 4.00
593 879 2.435372 TTTCAAGTTCAGGCACCTGT 57.565 45.000 16.12 0.00 43.96 4.00
594 880 1.679139 TTCAAGTTCAGGCACCTGTG 58.321 50.000 16.12 7.53 43.96 3.66
595 881 0.836606 TCAAGTTCAGGCACCTGTGA 59.163 50.000 16.12 9.70 43.96 3.58
596 882 1.421268 TCAAGTTCAGGCACCTGTGAT 59.579 47.619 16.12 1.05 43.96 3.06
597 883 1.538512 CAAGTTCAGGCACCTGTGATG 59.461 52.381 16.12 8.02 43.96 3.07
598 884 0.767375 AGTTCAGGCACCTGTGATGT 59.233 50.000 16.12 0.00 43.96 3.06
599 885 1.977854 AGTTCAGGCACCTGTGATGTA 59.022 47.619 16.12 0.00 43.96 2.29
600 886 2.371841 AGTTCAGGCACCTGTGATGTAA 59.628 45.455 16.12 0.00 43.96 2.41
601 887 3.009473 AGTTCAGGCACCTGTGATGTAAT 59.991 43.478 16.12 0.00 43.96 1.89
602 888 3.719268 TCAGGCACCTGTGATGTAATT 57.281 42.857 16.12 0.00 43.96 1.40
603 889 3.346315 TCAGGCACCTGTGATGTAATTG 58.654 45.455 16.12 0.00 43.96 2.32
604 890 3.008923 TCAGGCACCTGTGATGTAATTGA 59.991 43.478 16.12 0.00 43.96 2.57
605 891 3.127548 CAGGCACCTGTGATGTAATTGAC 59.872 47.826 8.61 0.00 39.10 3.18
606 892 3.009473 AGGCACCTGTGATGTAATTGACT 59.991 43.478 0.51 0.00 0.00 3.41
607 893 3.375299 GGCACCTGTGATGTAATTGACTC 59.625 47.826 0.51 0.00 0.00 3.36
608 894 3.375299 GCACCTGTGATGTAATTGACTCC 59.625 47.826 0.51 0.00 0.00 3.85
609 895 4.578871 CACCTGTGATGTAATTGACTCCA 58.421 43.478 0.00 0.00 0.00 3.86
610 896 5.188434 CACCTGTGATGTAATTGACTCCAT 58.812 41.667 0.00 0.00 0.00 3.41
611 897 5.649395 CACCTGTGATGTAATTGACTCCATT 59.351 40.000 0.00 0.00 0.00 3.16
612 898 6.823182 CACCTGTGATGTAATTGACTCCATTA 59.177 38.462 0.00 0.00 0.00 1.90
613 899 7.336679 CACCTGTGATGTAATTGACTCCATTAA 59.663 37.037 0.00 0.00 0.00 1.40
614 900 7.554118 ACCTGTGATGTAATTGACTCCATTAAG 59.446 37.037 0.00 0.00 0.00 1.85
628 914 5.046231 ACTCCATTAAGAACTCTCAACCTCC 60.046 44.000 0.00 0.00 0.00 4.30
630 916 3.955650 TTAAGAACTCTCAACCTCCGG 57.044 47.619 0.00 0.00 0.00 5.14
637 923 2.528127 TCAACCTCCGGCCTCCAA 60.528 61.111 0.00 0.00 0.00 3.53
689 975 7.586515 ATCCAAACGGAGACAAAAAGGAAACT 61.587 38.462 0.00 0.00 38.17 2.66
707 993 1.683917 ACTAGAGGCACGGATGATGAC 59.316 52.381 0.00 0.00 0.00 3.06
726 1012 0.105964 CCATCGACCCGAATAAGCCA 59.894 55.000 0.00 0.00 39.99 4.75
729 1015 0.105964 TCGACCCGAATAAGCCATGG 59.894 55.000 7.63 7.63 31.06 3.66
748 1034 2.485122 GTCATGCCGCGGAAAAGG 59.515 61.111 33.48 15.55 0.00 3.11
776 1062 4.946157 GGAAGGAGAAGAAAATGATGAGCA 59.054 41.667 0.00 0.00 0.00 4.26
843 1130 2.014128 ACCGCAACATAATTTCCTCCG 58.986 47.619 0.00 0.00 0.00 4.63
951 1261 1.595109 CCACAAGCGCACACTCTCA 60.595 57.895 11.47 0.00 0.00 3.27
954 1264 1.957695 CAAGCGCACACTCTCAGCA 60.958 57.895 11.47 0.00 0.00 4.41
955 1265 1.667191 AAGCGCACACTCTCAGCAG 60.667 57.895 11.47 0.00 0.00 4.24
969 1290 2.755876 GCAGCCAAACCCCCTAGC 60.756 66.667 0.00 0.00 0.00 3.42
970 1291 3.090765 CAGCCAAACCCCCTAGCT 58.909 61.111 0.00 0.00 0.00 3.32
971 1292 1.921869 GCAGCCAAACCCCCTAGCTA 61.922 60.000 0.00 0.00 31.23 3.32
972 1293 0.181350 CAGCCAAACCCCCTAGCTAG 59.819 60.000 14.20 14.20 31.23 3.42
973 1294 1.152943 GCCAAACCCCCTAGCTAGC 60.153 63.158 15.74 6.62 0.00 3.42
974 1295 1.636769 GCCAAACCCCCTAGCTAGCT 61.637 60.000 23.12 23.12 0.00 3.32
975 1296 1.802553 CCAAACCCCCTAGCTAGCTA 58.197 55.000 22.85 22.85 0.00 3.32
976 1297 1.694696 CCAAACCCCCTAGCTAGCTAG 59.305 57.143 35.39 35.39 44.07 3.42
977 1298 2.399580 CAAACCCCCTAGCTAGCTAGT 58.600 52.381 37.50 24.13 43.22 2.57
978 1299 3.573695 CAAACCCCCTAGCTAGCTAGTA 58.426 50.000 37.50 16.69 43.22 1.82
979 1300 3.965347 CAAACCCCCTAGCTAGCTAGTAA 59.035 47.826 37.50 16.35 43.22 2.24
1041 1362 2.037527 GGAGGTGGAGGTCCGTCT 59.962 66.667 0.00 0.00 39.43 4.18
1119 1440 3.181967 CTCTTCGCGCCGGTCTTG 61.182 66.667 1.90 0.00 0.00 3.02
1144 1465 3.319198 TCCTCGCCCACACCTTCC 61.319 66.667 0.00 0.00 0.00 3.46
1242 1563 3.111939 CTCGTCCTCCACCTAGCG 58.888 66.667 0.00 0.00 0.00 4.26
1541 1862 2.762043 GCTCCTCCTCCGCCTCTT 60.762 66.667 0.00 0.00 0.00 2.85
1902 2223 2.218239 GCAGCGTCGTCGTGATCTC 61.218 63.158 3.66 0.00 39.49 2.75
1979 2300 4.394920 TCTGAAATTGATTAAGGGTGCGAC 59.605 41.667 0.00 0.00 0.00 5.19
1980 2301 3.126171 TGAAATTGATTAAGGGTGCGACG 59.874 43.478 0.00 0.00 0.00 5.12
1981 2302 2.684001 ATTGATTAAGGGTGCGACGA 57.316 45.000 0.00 0.00 0.00 4.20
1993 2314 4.293694 CGACGATCGCCTGAAGAG 57.706 61.111 16.60 0.00 31.14 2.85
2089 2414 0.820871 TCGGGTGCAAATTTATGGCC 59.179 50.000 0.00 0.00 0.00 5.36
2093 2418 1.941975 GGTGCAAATTTATGGCCATGC 59.058 47.619 29.04 22.98 0.00 4.06
2140 2477 7.042725 GCTTTGTTCAGGTTTCAGTAAATTTCC 60.043 37.037 0.00 0.00 0.00 3.13
2184 2577 2.033801 CCAGTTGCAGTCCAAACTTCAG 59.966 50.000 0.00 0.00 34.68 3.02
2194 2587 3.001330 GTCCAAACTTCAGAAGTCGTGTG 59.999 47.826 16.44 11.52 41.91 3.82
2235 2629 9.206690 AGAAAATCTTATGATGTACTCTCTCCA 57.793 33.333 0.00 0.00 32.44 3.86
2236 2630 9.995003 GAAAATCTTATGATGTACTCTCTCCAT 57.005 33.333 0.00 0.00 32.44 3.41
2238 2632 9.995003 AAATCTTATGATGTACTCTCTCCATTC 57.005 33.333 0.00 0.00 32.44 2.67
2239 2633 8.954834 ATCTTATGATGTACTCTCTCCATTCT 57.045 34.615 0.00 0.00 0.00 2.40
2240 2634 8.175925 TCTTATGATGTACTCTCTCCATTCTG 57.824 38.462 0.00 0.00 0.00 3.02
2241 2635 8.001292 TCTTATGATGTACTCTCTCCATTCTGA 58.999 37.037 0.00 0.00 0.00 3.27
2242 2636 8.539117 TTATGATGTACTCTCTCCATTCTGAA 57.461 34.615 0.00 0.00 0.00 3.02
2243 2637 7.615039 ATGATGTACTCTCTCCATTCTGAAT 57.385 36.000 0.00 0.00 0.00 2.57
2244 2638 7.429374 TGATGTACTCTCTCCATTCTGAATT 57.571 36.000 0.00 0.00 0.00 2.17
2245 2639 8.539117 TGATGTACTCTCTCCATTCTGAATTA 57.461 34.615 0.00 0.00 0.00 1.40
2246 2640 8.417106 TGATGTACTCTCTCCATTCTGAATTAC 58.583 37.037 0.00 0.00 0.00 1.89
2247 2641 7.962995 TGTACTCTCTCCATTCTGAATTACT 57.037 36.000 0.00 0.00 0.00 2.24
2248 2642 8.367660 TGTACTCTCTCCATTCTGAATTACTT 57.632 34.615 0.00 0.00 0.00 2.24
2249 2643 8.253810 TGTACTCTCTCCATTCTGAATTACTTG 58.746 37.037 0.00 0.00 0.00 3.16
2250 2644 7.251321 ACTCTCTCCATTCTGAATTACTTGT 57.749 36.000 0.00 0.00 0.00 3.16
2251 2645 7.327214 ACTCTCTCCATTCTGAATTACTTGTC 58.673 38.462 0.00 0.00 0.00 3.18
2252 2646 6.333416 TCTCTCCATTCTGAATTACTTGTCG 58.667 40.000 0.00 0.00 0.00 4.35
2253 2647 4.870426 TCTCCATTCTGAATTACTTGTCGC 59.130 41.667 0.00 0.00 0.00 5.19
2254 2648 4.574892 TCCATTCTGAATTACTTGTCGCA 58.425 39.130 0.00 0.00 0.00 5.10
2255 2649 5.000591 TCCATTCTGAATTACTTGTCGCAA 58.999 37.500 0.00 0.00 0.00 4.85
2256 2650 5.122239 TCCATTCTGAATTACTTGTCGCAAG 59.878 40.000 15.16 15.16 0.00 4.01
2257 2651 5.106555 CCATTCTGAATTACTTGTCGCAAGT 60.107 40.000 22.53 22.53 39.48 3.16
2258 2652 6.092122 CCATTCTGAATTACTTGTCGCAAGTA 59.908 38.462 20.95 20.95 39.48 2.24
2259 2653 7.201644 CCATTCTGAATTACTTGTCGCAAGTAT 60.202 37.037 23.59 14.96 33.27 2.12
2260 2654 6.647212 TCTGAATTACTTGTCGCAAGTATG 57.353 37.500 23.59 15.22 33.27 2.39
2261 2655 5.580691 TCTGAATTACTTGTCGCAAGTATGG 59.419 40.000 23.59 15.39 33.27 2.74
2262 2656 5.483811 TGAATTACTTGTCGCAAGTATGGA 58.516 37.500 23.59 14.66 33.27 3.41
2263 2657 6.112734 TGAATTACTTGTCGCAAGTATGGAT 58.887 36.000 23.59 15.77 33.27 3.41
2264 2658 5.991328 ATTACTTGTCGCAAGTATGGATG 57.009 39.130 23.59 2.90 33.27 3.51
2265 2659 3.334583 ACTTGTCGCAAGTATGGATGT 57.665 42.857 19.21 0.00 39.48 3.06
2266 2660 4.465632 ACTTGTCGCAAGTATGGATGTA 57.534 40.909 19.21 0.00 39.48 2.29
2267 2661 5.023533 ACTTGTCGCAAGTATGGATGTAT 57.976 39.130 19.21 0.00 39.48 2.29
2268 2662 5.050490 ACTTGTCGCAAGTATGGATGTATC 58.950 41.667 19.21 0.00 39.48 2.24
2269 2663 4.937201 TGTCGCAAGTATGGATGTATCT 57.063 40.909 0.00 0.00 39.48 1.98
2270 2664 6.040504 ACTTGTCGCAAGTATGGATGTATCTA 59.959 38.462 19.21 0.00 39.48 1.98
2271 2665 6.013842 TGTCGCAAGTATGGATGTATCTAG 57.986 41.667 0.00 0.00 39.48 2.43
2272 2666 5.768164 TGTCGCAAGTATGGATGTATCTAGA 59.232 40.000 0.00 0.00 39.48 2.43
2273 2667 6.434340 TGTCGCAAGTATGGATGTATCTAGAT 59.566 38.462 10.73 10.73 39.48 1.98
2274 2668 6.749578 GTCGCAAGTATGGATGTATCTAGATG 59.250 42.308 15.79 0.00 39.48 2.90
2275 2669 6.434340 TCGCAAGTATGGATGTATCTAGATGT 59.566 38.462 15.79 1.25 39.48 3.06
2276 2670 7.610305 TCGCAAGTATGGATGTATCTAGATGTA 59.390 37.037 15.79 4.44 39.48 2.29
2277 2671 8.409371 CGCAAGTATGGATGTATCTAGATGTAT 58.591 37.037 15.79 9.11 0.00 2.29
2304 2698 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
2305 2699 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
2306 2700 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
2307 2701 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2308 2702 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
2309 2703 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
2310 2704 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
2311 2705 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
2312 2706 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
2313 2707 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
2314 2708 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
2315 2709 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
2316 2710 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
2317 2711 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
2318 2712 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
2319 2713 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
2320 2714 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
2321 2715 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
2322 2716 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
2323 2717 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
2324 2718 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
2325 2719 3.184541 CGACGAGTAATTTGGAACGGAT 58.815 45.455 0.00 0.00 0.00 4.18
2326 2720 3.000078 CGACGAGTAATTTGGAACGGATG 60.000 47.826 0.00 0.00 0.00 3.51
2327 2721 3.267483 ACGAGTAATTTGGAACGGATGG 58.733 45.455 0.00 0.00 0.00 3.51
2328 2722 3.055675 ACGAGTAATTTGGAACGGATGGA 60.056 43.478 0.00 0.00 0.00 3.41
2329 2723 3.555956 CGAGTAATTTGGAACGGATGGAG 59.444 47.826 0.00 0.00 0.00 3.86
2330 2724 4.514401 GAGTAATTTGGAACGGATGGAGT 58.486 43.478 0.00 0.00 0.00 3.85
2331 2725 5.667466 GAGTAATTTGGAACGGATGGAGTA 58.333 41.667 0.00 0.00 0.00 2.59
2332 2726 6.248569 AGTAATTTGGAACGGATGGAGTAT 57.751 37.500 0.00 0.00 0.00 2.12
2333 2727 7.369551 AGTAATTTGGAACGGATGGAGTATA 57.630 36.000 0.00 0.00 0.00 1.47
2334 2728 7.215085 AGTAATTTGGAACGGATGGAGTATAC 58.785 38.462 0.00 0.00 0.00 1.47
2335 2729 5.623956 ATTTGGAACGGATGGAGTATACA 57.376 39.130 5.50 0.00 0.00 2.29
2336 2730 5.423704 TTTGGAACGGATGGAGTATACAA 57.576 39.130 5.50 0.00 0.00 2.41
2340 2734 6.518493 TGGAACGGATGGAGTATACAAATAC 58.482 40.000 5.50 0.00 38.64 1.89
2346 2740 8.375506 ACGGATGGAGTATACAAATACAATGAT 58.624 33.333 5.50 0.00 40.49 2.45
2359 2753 8.296713 ACAAATACAATGATTGTGTTGTACTCC 58.703 33.333 26.75 0.00 44.39 3.85
2360 2754 7.391148 AATACAATGATTGTGTTGTACTCCC 57.609 36.000 20.29 0.00 42.32 4.30
2361 2755 4.985538 ACAATGATTGTGTTGTACTCCCT 58.014 39.130 10.45 0.00 43.48 4.20
2362 2756 5.003804 ACAATGATTGTGTTGTACTCCCTC 58.996 41.667 10.45 0.00 43.48 4.30
2363 2757 3.695830 TGATTGTGTTGTACTCCCTCC 57.304 47.619 0.00 0.00 0.00 4.30
2364 2758 2.028476 TGATTGTGTTGTACTCCCTCCG 60.028 50.000 0.00 0.00 0.00 4.63
2365 2759 1.416243 TTGTGTTGTACTCCCTCCGT 58.584 50.000 0.00 0.00 0.00 4.69
2366 2760 1.416243 TGTGTTGTACTCCCTCCGTT 58.584 50.000 0.00 0.00 0.00 4.44
2367 2761 1.342174 TGTGTTGTACTCCCTCCGTTC 59.658 52.381 0.00 0.00 0.00 3.95
2368 2762 0.971386 TGTTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.00 0.00 3.62
2369 2763 0.971386 GTTGTACTCCCTCCGTTCCA 59.029 55.000 0.00 0.00 0.00 3.53
2370 2764 1.345415 GTTGTACTCCCTCCGTTCCAA 59.655 52.381 0.00 0.00 0.00 3.53
2371 2765 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
2372 2766 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
2373 2767 2.640826 TGTACTCCCTCCGTTCCAAATT 59.359 45.455 0.00 0.00 0.00 1.82
2374 2768 3.839490 TGTACTCCCTCCGTTCCAAATTA 59.161 43.478 0.00 0.00 0.00 1.40
2375 2769 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2376 2770 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2377 2771 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2378 2772 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
2379 2773 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
2380 2774 3.332034 CCTCCGTTCCAAATTACTCGTT 58.668 45.455 0.00 0.00 0.00 3.85
2381 2775 3.124636 CCTCCGTTCCAAATTACTCGTTG 59.875 47.826 0.00 0.00 0.00 4.10
2382 2776 3.731089 TCCGTTCCAAATTACTCGTTGT 58.269 40.909 0.00 0.00 0.00 3.32
2383 2777 3.495377 TCCGTTCCAAATTACTCGTTGTG 59.505 43.478 0.00 0.00 0.00 3.33
2384 2778 3.364565 CCGTTCCAAATTACTCGTTGTGG 60.365 47.826 0.00 0.00 0.00 4.17
2385 2779 3.249080 CGTTCCAAATTACTCGTTGTGGT 59.751 43.478 0.00 0.00 0.00 4.16
2386 2780 4.260866 CGTTCCAAATTACTCGTTGTGGTT 60.261 41.667 0.00 0.00 0.00 3.67
2387 2781 5.584442 GTTCCAAATTACTCGTTGTGGTTT 58.416 37.500 0.00 0.00 0.00 3.27
2388 2782 5.838531 TCCAAATTACTCGTTGTGGTTTT 57.161 34.783 0.00 0.00 0.00 2.43
2389 2783 6.939132 TCCAAATTACTCGTTGTGGTTTTA 57.061 33.333 0.00 0.00 0.00 1.52
2390 2784 6.961576 TCCAAATTACTCGTTGTGGTTTTAG 58.038 36.000 0.00 0.00 0.00 1.85
2391 2785 6.543100 TCCAAATTACTCGTTGTGGTTTTAGT 59.457 34.615 0.00 0.00 0.00 2.24
2392 2786 7.067251 TCCAAATTACTCGTTGTGGTTTTAGTT 59.933 33.333 0.00 0.00 0.00 2.24
2393 2787 7.377662 CCAAATTACTCGTTGTGGTTTTAGTTC 59.622 37.037 0.00 0.00 0.00 3.01
2394 2788 7.556733 AATTACTCGTTGTGGTTTTAGTTCA 57.443 32.000 0.00 0.00 0.00 3.18
2395 2789 6.981762 TTACTCGTTGTGGTTTTAGTTCAA 57.018 33.333 0.00 0.00 0.00 2.69
2396 2790 5.883503 ACTCGTTGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
2397 2791 6.445357 ACTCGTTGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
2398 2792 6.859017 ACTCGTTGTGGTTTTAGTTCAAATT 58.141 32.000 0.00 0.00 0.00 1.82
2399 2793 7.317390 ACTCGTTGTGGTTTTAGTTCAAATTT 58.683 30.769 0.00 0.00 0.00 1.82
2400 2794 7.815549 ACTCGTTGTGGTTTTAGTTCAAATTTT 59.184 29.630 0.00 0.00 0.00 1.82
2401 2795 7.954447 TCGTTGTGGTTTTAGTTCAAATTTTG 58.046 30.769 2.59 2.59 0.00 2.44
2402 2796 7.813148 TCGTTGTGGTTTTAGTTCAAATTTTGA 59.187 29.630 7.74 7.74 38.04 2.69
2403 2797 8.436200 CGTTGTGGTTTTAGTTCAAATTTTGAA 58.564 29.630 18.29 18.29 46.68 2.69
2417 2811 8.264022 TCAAATTTTGAACTAAAATCACGACG 57.736 30.769 9.36 0.00 45.74 5.12
2418 2812 8.123575 TCAAATTTTGAACTAAAATCACGACGA 58.876 29.630 9.36 0.00 45.74 4.20
2419 2813 8.409690 CAAATTTTGAACTAAAATCACGACGAG 58.590 33.333 0.00 0.00 45.74 4.18
2420 2814 6.592798 TTTTGAACTAAAATCACGACGAGT 57.407 33.333 0.00 0.00 33.48 4.18
2421 2815 6.592798 TTTGAACTAAAATCACGACGAGTT 57.407 33.333 0.00 0.00 32.03 3.01
2422 2816 6.592798 TTGAACTAAAATCACGACGAGTTT 57.407 33.333 0.00 9.27 43.86 2.66
2423 2817 6.592798 TGAACTAAAATCACGACGAGTTTT 57.407 33.333 0.00 8.15 38.74 2.43
2424 2818 7.697352 TGAACTAAAATCACGACGAGTTTTA 57.303 32.000 0.00 8.82 38.74 1.52
2425 2819 7.780313 TGAACTAAAATCACGACGAGTTTTAG 58.220 34.615 24.70 24.70 38.74 1.85
2427 2821 7.704789 ACTAAAATCACGACGAGTTTTAGTT 57.295 32.000 25.46 17.45 46.77 2.24
2428 2822 7.781277 ACTAAAATCACGACGAGTTTTAGTTC 58.219 34.615 25.46 0.00 46.77 3.01
2429 2823 6.592798 AAAATCACGACGAGTTTTAGTTCA 57.407 33.333 0.00 0.00 38.74 3.18
2430 2824 6.592798 AAATCACGACGAGTTTTAGTTCAA 57.407 33.333 0.00 0.00 0.00 2.69
2431 2825 6.592798 AATCACGACGAGTTTTAGTTCAAA 57.407 33.333 0.00 0.00 0.00 2.69
2432 2826 6.780706 ATCACGACGAGTTTTAGTTCAAAT 57.219 33.333 0.00 0.00 0.00 2.32
2433 2827 6.592798 TCACGACGAGTTTTAGTTCAAATT 57.407 33.333 0.00 0.00 0.00 1.82
2434 2828 7.007313 TCACGACGAGTTTTAGTTCAAATTT 57.993 32.000 0.00 0.00 0.00 1.82
2435 2829 7.465989 TCACGACGAGTTTTAGTTCAAATTTT 58.534 30.769 0.00 0.00 0.00 1.82
2436 2830 7.427030 TCACGACGAGTTTTAGTTCAAATTTTG 59.573 33.333 0.00 2.59 0.00 2.44
2437 2831 7.427030 CACGACGAGTTTTAGTTCAAATTTTGA 59.573 33.333 7.74 7.74 38.04 2.69
2438 2832 7.964011 ACGACGAGTTTTAGTTCAAATTTTGAA 59.036 29.630 18.29 18.29 46.68 2.69
2451 2845 7.743520 TCAAATTTTGAACTAAAACCACGAC 57.256 32.000 9.36 0.00 40.80 4.34
2452 2846 6.469595 TCAAATTTTGAACTAAAACCACGACG 59.530 34.615 9.36 0.00 40.80 5.12
2453 2847 5.738118 ATTTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 40.80 4.20
2454 2848 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
2455 2849 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
2456 2850 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
2457 2851 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
2458 2852 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
2459 2853 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
2460 2854 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
2461 2855 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
2462 2856 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
2463 2857 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
2464 2858 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
2465 2859 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
2466 2860 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
2467 2861 2.091588 CACGACGAGTAATTTGGAACGG 59.908 50.000 0.00 0.00 0.00 4.44
2468 2862 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
2469 2863 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
2470 2864 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2471 2865 2.564062 ACGAGTAATTTGGAACGGAGGA 59.436 45.455 0.00 0.00 0.00 3.71
2618 3016 7.201696 GGCCATCATTCACTTAAAATCGTTAGA 60.202 37.037 0.00 0.00 0.00 2.10
2697 3095 4.617200 CCAAACAGGGCCCTTGAA 57.383 55.556 26.10 0.00 0.00 2.69
2698 3096 3.071671 CCAAACAGGGCCCTTGAAT 57.928 52.632 26.10 5.84 0.00 2.57
2699 3097 2.230130 CCAAACAGGGCCCTTGAATA 57.770 50.000 26.10 0.00 0.00 1.75
2700 3098 2.102578 CCAAACAGGGCCCTTGAATAG 58.897 52.381 26.10 13.02 0.00 1.73
2701 3099 2.557452 CCAAACAGGGCCCTTGAATAGT 60.557 50.000 26.10 13.82 0.00 2.12
2702 3100 3.165071 CAAACAGGGCCCTTGAATAGTT 58.835 45.455 26.10 19.62 0.00 2.24
2788 3186 5.278957 GCTCAGCTAAAGAATTTTGGTTGGA 60.279 40.000 0.00 0.00 39.34 3.53
2816 3218 9.616156 TTTTGGCTCCGACTAATAACAAATATA 57.384 29.630 0.00 0.00 0.00 0.86
2817 3219 9.787435 TTTGGCTCCGACTAATAACAAATATAT 57.213 29.630 0.00 0.00 0.00 0.86
2845 3247 4.616181 CGAAGCAAGAAAATACCGGAAT 57.384 40.909 9.46 0.00 0.00 3.01
2846 3248 4.588278 CGAAGCAAGAAAATACCGGAATC 58.412 43.478 9.46 0.00 0.00 2.52
2847 3249 4.094294 CGAAGCAAGAAAATACCGGAATCA 59.906 41.667 9.46 0.00 0.00 2.57
2853 3255 5.638596 AGAAAATACCGGAATCAAACCAC 57.361 39.130 9.46 0.00 0.00 4.16
2856 3258 5.385509 AAATACCGGAATCAAACCACAAG 57.614 39.130 9.46 0.00 0.00 3.16
2859 3261 1.335872 CCGGAATCAAACCACAAGCAC 60.336 52.381 0.00 0.00 0.00 4.40
2863 3265 0.951558 ATCAAACCACAAGCACGGAC 59.048 50.000 0.00 0.00 0.00 4.79
2866 3268 0.738389 AAACCACAAGCACGGACAAG 59.262 50.000 0.00 0.00 0.00 3.16
2882 3284 2.754946 CAAGCATTGGCCACAGAAAT 57.245 45.000 3.88 0.00 43.94 2.17
2897 3299 5.095490 CACAGAAATAAAACCGAATGGAGC 58.905 41.667 0.00 0.00 39.21 4.70
2898 3300 5.010282 ACAGAAATAAAACCGAATGGAGCT 58.990 37.500 0.00 0.00 39.21 4.09
2957 3366 9.977762 GAAAATCATTTTTGGCATAATTCTCAC 57.022 29.630 0.00 0.00 35.20 3.51
2984 3393 5.072055 TCAATTCAACAAGCTCCTTGATCA 58.928 37.500 11.56 0.00 43.42 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 183 9.883142 TGAACAATAATTTGAAAACCAGAACTT 57.117 25.926 0.00 0.00 36.64 2.66
183 185 9.092876 TGTGAACAATAATTTGAAAACCAGAAC 57.907 29.630 0.00 0.00 36.64 3.01
200 202 9.019764 CGAACATTTTCTTAAGTTGTGAACAAT 57.980 29.630 1.63 0.00 38.24 2.71
213 215 9.413048 ACTTTTTGAAACACGAACATTTTCTTA 57.587 25.926 0.00 0.00 31.68 2.10
214 216 8.220434 CACTTTTTGAAACACGAACATTTTCTT 58.780 29.630 0.00 0.00 31.68 2.52
215 217 7.383843 ACACTTTTTGAAACACGAACATTTTCT 59.616 29.630 0.00 0.00 31.68 2.52
216 218 7.506474 ACACTTTTTGAAACACGAACATTTTC 58.494 30.769 0.00 0.00 0.00 2.29
226 228 9.967245 GAAATTCCTAAACACTTTTTGAAACAC 57.033 29.630 0.00 0.00 0.00 3.32
270 556 4.172505 TGCGATTTGGAACATAATGTTGC 58.827 39.130 0.00 0.00 46.88 4.17
271 557 6.702972 TTTGCGATTTGGAACATAATGTTG 57.297 33.333 0.00 0.00 41.28 3.33
299 585 8.527810 TGAACATAAATTTAGAAACATGGGGAC 58.472 33.333 3.94 0.00 0.00 4.46
300 586 8.657387 TGAACATAAATTTAGAAACATGGGGA 57.343 30.769 3.94 0.00 0.00 4.81
301 587 9.717942 TTTGAACATAAATTTAGAAACATGGGG 57.282 29.630 3.94 0.00 0.00 4.96
327 613 9.829507 TCACAAATAATCACCTCAAATTGTTTT 57.170 25.926 0.00 0.00 27.78 2.43
328 614 9.480053 CTCACAAATAATCACCTCAAATTGTTT 57.520 29.630 0.00 0.00 29.60 2.83
329 615 8.859090 TCTCACAAATAATCACCTCAAATTGTT 58.141 29.630 0.00 0.00 0.00 2.83
330 616 8.408043 TCTCACAAATAATCACCTCAAATTGT 57.592 30.769 0.00 0.00 0.00 2.71
331 617 9.695526 TTTCTCACAAATAATCACCTCAAATTG 57.304 29.630 0.00 0.00 0.00 2.32
396 682 1.675641 GTGACCAGGGCATGTGACC 60.676 63.158 0.00 0.00 46.16 4.02
397 683 0.957395 CAGTGACCAGGGCATGTGAC 60.957 60.000 0.00 0.00 0.00 3.67
398 684 1.376086 CAGTGACCAGGGCATGTGA 59.624 57.895 0.00 0.00 0.00 3.58
399 685 2.338015 GCAGTGACCAGGGCATGTG 61.338 63.158 0.00 0.00 0.00 3.21
400 686 2.034687 GCAGTGACCAGGGCATGT 59.965 61.111 0.00 0.00 0.00 3.21
401 687 2.753043 GGCAGTGACCAGGGCATG 60.753 66.667 0.00 0.00 0.00 4.06
402 688 2.937689 AGGCAGTGACCAGGGCAT 60.938 61.111 0.00 0.00 0.00 4.40
403 689 3.640407 GAGGCAGTGACCAGGGCA 61.640 66.667 0.00 0.00 0.00 5.36
404 690 4.416738 GGAGGCAGTGACCAGGGC 62.417 72.222 0.00 0.00 0.00 5.19
405 691 3.721706 GGGAGGCAGTGACCAGGG 61.722 72.222 0.00 0.00 0.00 4.45
406 692 2.608988 AGGGAGGCAGTGACCAGG 60.609 66.667 0.00 0.00 0.00 4.45
407 693 1.270414 ATCAGGGAGGCAGTGACCAG 61.270 60.000 0.00 0.00 0.00 4.00
408 694 1.229625 ATCAGGGAGGCAGTGACCA 60.230 57.895 0.00 0.00 0.00 4.02
409 695 1.222936 CATCAGGGAGGCAGTGACC 59.777 63.158 0.00 0.00 0.00 4.02
410 696 1.222936 CCATCAGGGAGGCAGTGAC 59.777 63.158 0.00 0.00 40.01 3.67
411 697 3.731547 CCATCAGGGAGGCAGTGA 58.268 61.111 0.00 0.00 40.01 3.41
428 714 2.836360 CATGATGCAGGGCCCACC 60.836 66.667 27.56 15.12 40.67 4.61
429 715 3.534056 GCATGATGCAGGGCCCAC 61.534 66.667 27.56 16.95 44.26 4.61
438 724 3.962421 GGCGAGCCAGCATGATGC 61.962 66.667 9.89 9.89 45.46 3.91
439 725 2.515290 TGGCGAGCCAGCATGATG 60.515 61.111 13.49 3.34 41.89 3.07
447 733 1.965930 GTGTTGATGTGGCGAGCCA 60.966 57.895 13.49 13.49 45.02 4.75
448 734 2.870372 GTGTTGATGTGGCGAGCC 59.130 61.111 7.26 7.26 0.00 4.70
449 735 1.361668 ATCGTGTTGATGTGGCGAGC 61.362 55.000 0.00 0.00 35.45 5.03
450 736 2.754648 ATCGTGTTGATGTGGCGAG 58.245 52.632 0.00 0.00 35.45 5.03
458 744 6.143919 CGCTTGTATATGTACATCGTGTTGAT 59.856 38.462 12.68 0.80 40.35 2.57
459 745 5.457473 CGCTTGTATATGTACATCGTGTTGA 59.543 40.000 12.68 0.00 40.35 3.18
460 746 5.231357 ACGCTTGTATATGTACATCGTGTTG 59.769 40.000 20.90 1.84 42.89 3.33
461 747 5.345702 ACGCTTGTATATGTACATCGTGTT 58.654 37.500 20.90 0.00 42.89 3.32
462 748 4.928601 ACGCTTGTATATGTACATCGTGT 58.071 39.130 20.90 15.92 42.89 4.49
464 750 4.202080 ACCACGCTTGTATATGTACATCGT 60.202 41.667 12.68 18.00 44.07 3.73
465 751 4.295870 ACCACGCTTGTATATGTACATCG 58.704 43.478 12.68 10.29 40.35 3.84
466 752 7.223193 TGTTAACCACGCTTGTATATGTACATC 59.777 37.037 12.68 0.00 40.35 3.06
467 753 7.010738 GTGTTAACCACGCTTGTATATGTACAT 59.989 37.037 13.93 13.93 36.16 2.29
468 754 6.310956 GTGTTAACCACGCTTGTATATGTACA 59.689 38.462 0.00 0.00 35.22 2.90
469 755 6.237915 GGTGTTAACCACGCTTGTATATGTAC 60.238 42.308 2.48 0.00 46.75 2.90
470 756 5.811613 GGTGTTAACCACGCTTGTATATGTA 59.188 40.000 2.48 0.00 46.75 2.29
471 757 4.632688 GGTGTTAACCACGCTTGTATATGT 59.367 41.667 2.48 0.00 46.75 2.29
472 758 5.151632 GGTGTTAACCACGCTTGTATATG 57.848 43.478 2.48 0.00 46.75 1.78
485 771 1.657094 CGTGCATCTACGGTGTTAACC 59.343 52.381 2.48 0.00 43.76 2.85
486 772 1.060122 GCGTGCATCTACGGTGTTAAC 59.940 52.381 0.00 0.00 43.87 2.01
487 773 1.352114 GCGTGCATCTACGGTGTTAA 58.648 50.000 0.00 0.00 43.87 2.01
488 774 3.038946 GCGTGCATCTACGGTGTTA 57.961 52.632 0.00 0.00 43.87 2.41
489 775 3.870606 GCGTGCATCTACGGTGTT 58.129 55.556 0.00 0.00 43.87 3.32
493 779 1.756375 GCTTGAGCGTGCATCTACGG 61.756 60.000 0.00 0.00 43.87 4.02
494 780 1.633171 GCTTGAGCGTGCATCTACG 59.367 57.895 0.00 0.00 46.28 3.51
495 781 0.740868 TGGCTTGAGCGTGCATCTAC 60.741 55.000 0.00 0.00 43.26 2.59
496 782 0.036483 TTGGCTTGAGCGTGCATCTA 60.036 50.000 0.00 0.00 43.26 1.98
497 783 0.890542 TTTGGCTTGAGCGTGCATCT 60.891 50.000 0.00 0.00 43.26 2.90
498 784 0.171903 ATTTGGCTTGAGCGTGCATC 59.828 50.000 0.00 0.00 43.26 3.91
499 785 0.604578 AATTTGGCTTGAGCGTGCAT 59.395 45.000 0.00 0.00 43.26 3.96
500 786 0.388659 AAATTTGGCTTGAGCGTGCA 59.611 45.000 0.00 0.00 43.26 4.57
501 787 1.501169 AAAATTTGGCTTGAGCGTGC 58.499 45.000 0.00 0.00 43.26 5.34
502 788 4.324402 GTGATAAAATTTGGCTTGAGCGTG 59.676 41.667 0.00 0.00 43.26 5.34
503 789 4.485163 GTGATAAAATTTGGCTTGAGCGT 58.515 39.130 0.00 0.00 43.26 5.07
504 790 3.859386 GGTGATAAAATTTGGCTTGAGCG 59.141 43.478 0.00 0.00 43.26 5.03
505 791 3.859386 CGGTGATAAAATTTGGCTTGAGC 59.141 43.478 0.00 0.00 41.14 4.26
506 792 5.309323 TCGGTGATAAAATTTGGCTTGAG 57.691 39.130 0.00 0.00 0.00 3.02
507 793 5.913137 ATCGGTGATAAAATTTGGCTTGA 57.087 34.783 0.00 0.00 0.00 3.02
508 794 5.229887 CGAATCGGTGATAAAATTTGGCTTG 59.770 40.000 0.00 0.00 0.00 4.01
509 795 5.124776 TCGAATCGGTGATAAAATTTGGCTT 59.875 36.000 1.76 0.00 0.00 4.35
510 796 4.638421 TCGAATCGGTGATAAAATTTGGCT 59.362 37.500 1.76 0.00 0.00 4.75
511 797 4.915704 TCGAATCGGTGATAAAATTTGGC 58.084 39.130 1.76 0.00 0.00 4.52
512 798 6.494842 ACATCGAATCGGTGATAAAATTTGG 58.505 36.000 23.60 0.00 40.81 3.28
513 799 8.335356 AGTACATCGAATCGGTGATAAAATTTG 58.665 33.333 23.60 0.00 40.81 2.32
514 800 8.433421 AGTACATCGAATCGGTGATAAAATTT 57.567 30.769 23.60 0.00 40.81 1.82
515 801 9.706691 ATAGTACATCGAATCGGTGATAAAATT 57.293 29.630 23.60 0.22 40.81 1.82
516 802 9.140286 CATAGTACATCGAATCGGTGATAAAAT 57.860 33.333 23.60 6.34 40.81 1.82
517 803 7.115805 GCATAGTACATCGAATCGGTGATAAAA 59.884 37.037 23.60 4.21 40.81 1.52
518 804 6.584942 GCATAGTACATCGAATCGGTGATAAA 59.415 38.462 23.60 5.64 40.81 1.40
519 805 6.090783 GCATAGTACATCGAATCGGTGATAA 58.909 40.000 23.60 4.64 40.81 1.75
520 806 5.392703 GGCATAGTACATCGAATCGGTGATA 60.393 44.000 23.60 12.02 40.81 2.15
521 807 4.486090 GCATAGTACATCGAATCGGTGAT 58.514 43.478 23.60 10.21 40.81 3.06
522 808 3.305131 GGCATAGTACATCGAATCGGTGA 60.305 47.826 23.60 3.41 40.81 4.02
523 809 2.987149 GGCATAGTACATCGAATCGGTG 59.013 50.000 14.98 14.98 44.22 4.94
524 810 2.351447 CGGCATAGTACATCGAATCGGT 60.351 50.000 1.76 0.00 0.00 4.69
525 811 2.251040 CGGCATAGTACATCGAATCGG 58.749 52.381 1.76 0.00 0.00 4.18
526 812 2.929960 ACGGCATAGTACATCGAATCG 58.070 47.619 0.00 0.00 0.00 3.34
527 813 5.458891 ACTTACGGCATAGTACATCGAATC 58.541 41.667 0.00 0.00 0.00 2.52
528 814 5.449107 ACTTACGGCATAGTACATCGAAT 57.551 39.130 0.00 0.00 0.00 3.34
529 815 4.906065 ACTTACGGCATAGTACATCGAA 57.094 40.909 0.00 0.00 0.00 3.71
530 816 4.906065 AACTTACGGCATAGTACATCGA 57.094 40.909 0.00 0.00 0.00 3.59
531 817 5.961395 AAAACTTACGGCATAGTACATCG 57.039 39.130 0.00 0.00 0.00 3.84
532 818 6.477688 TGCTAAAACTTACGGCATAGTACATC 59.522 38.462 0.00 0.00 0.00 3.06
533 819 6.257193 GTGCTAAAACTTACGGCATAGTACAT 59.743 38.462 0.00 0.00 35.37 2.29
534 820 5.577945 GTGCTAAAACTTACGGCATAGTACA 59.422 40.000 0.00 0.00 35.37 2.90
535 821 5.006068 GGTGCTAAAACTTACGGCATAGTAC 59.994 44.000 0.00 0.00 35.37 2.73
536 822 5.111293 GGTGCTAAAACTTACGGCATAGTA 58.889 41.667 0.00 0.00 35.37 1.82
537 823 3.937079 GGTGCTAAAACTTACGGCATAGT 59.063 43.478 0.00 0.00 35.37 2.12
538 824 3.936453 TGGTGCTAAAACTTACGGCATAG 59.064 43.478 0.00 0.00 35.37 2.23
539 825 3.940319 TGGTGCTAAAACTTACGGCATA 58.060 40.909 0.00 0.00 35.37 3.14
540 826 2.785562 TGGTGCTAAAACTTACGGCAT 58.214 42.857 0.00 0.00 35.37 4.40
541 827 2.257691 TGGTGCTAAAACTTACGGCA 57.742 45.000 0.00 0.00 0.00 5.69
542 828 3.004002 AGTTTGGTGCTAAAACTTACGGC 59.996 43.478 6.27 0.00 43.60 5.68
543 829 4.273969 TCAGTTTGGTGCTAAAACTTACGG 59.726 41.667 8.61 1.00 43.60 4.02
544 830 5.412526 TCAGTTTGGTGCTAAAACTTACG 57.587 39.130 8.61 0.00 43.60 3.18
545 831 8.642908 AAAATCAGTTTGGTGCTAAAACTTAC 57.357 30.769 8.61 0.00 43.60 2.34
546 832 9.308318 GAAAAATCAGTTTGGTGCTAAAACTTA 57.692 29.630 8.61 3.57 43.60 2.24
547 833 8.040727 AGAAAAATCAGTTTGGTGCTAAAACTT 58.959 29.630 8.61 0.00 43.60 2.66
548 834 7.555965 AGAAAAATCAGTTTGGTGCTAAAACT 58.444 30.769 6.27 6.27 46.25 2.66
549 835 7.770801 AGAAAAATCAGTTTGGTGCTAAAAC 57.229 32.000 2.47 2.47 37.71 2.43
550 836 8.785329 AAAGAAAAATCAGTTTGGTGCTAAAA 57.215 26.923 0.00 0.00 0.00 1.52
551 837 8.785329 AAAAGAAAAATCAGTTTGGTGCTAAA 57.215 26.923 0.00 0.00 0.00 1.85
552 838 8.037758 TGAAAAGAAAAATCAGTTTGGTGCTAA 58.962 29.630 0.00 0.00 0.00 3.09
553 839 7.551585 TGAAAAGAAAAATCAGTTTGGTGCTA 58.448 30.769 0.00 0.00 0.00 3.49
554 840 6.405538 TGAAAAGAAAAATCAGTTTGGTGCT 58.594 32.000 0.00 0.00 0.00 4.40
555 841 6.660887 TGAAAAGAAAAATCAGTTTGGTGC 57.339 33.333 0.00 0.00 0.00 5.01
566 852 8.325759 CAGGTGCCTGAACTTGAAAAGAAAAAT 61.326 37.037 12.66 0.00 46.43 1.82
567 853 7.069738 CAGGTGCCTGAACTTGAAAAGAAAAA 61.070 38.462 12.66 0.00 46.43 1.94
568 854 5.624281 CAGGTGCCTGAACTTGAAAAGAAAA 60.624 40.000 12.66 0.00 46.43 2.29
569 855 4.142182 CAGGTGCCTGAACTTGAAAAGAAA 60.142 41.667 12.66 0.00 46.43 2.52
570 856 3.381272 CAGGTGCCTGAACTTGAAAAGAA 59.619 43.478 12.66 0.00 46.43 2.52
571 857 2.951642 CAGGTGCCTGAACTTGAAAAGA 59.048 45.455 12.66 0.00 46.43 2.52
573 859 2.426738 CACAGGTGCCTGAACTTGAAAA 59.573 45.455 23.55 0.00 46.30 2.29
574 860 2.023673 CACAGGTGCCTGAACTTGAAA 58.976 47.619 23.55 0.00 46.30 2.69
575 861 1.211703 TCACAGGTGCCTGAACTTGAA 59.788 47.619 23.55 1.26 46.30 2.69
576 862 0.836606 TCACAGGTGCCTGAACTTGA 59.163 50.000 23.55 13.80 46.30 3.02
577 863 1.538512 CATCACAGGTGCCTGAACTTG 59.461 52.381 23.55 11.83 46.30 3.16
578 864 1.143684 ACATCACAGGTGCCTGAACTT 59.856 47.619 23.55 0.00 46.30 2.66
579 865 0.767375 ACATCACAGGTGCCTGAACT 59.233 50.000 23.55 5.49 46.30 3.01
580 866 2.472695 TACATCACAGGTGCCTGAAC 57.527 50.000 23.55 0.00 46.30 3.18
581 867 3.719268 ATTACATCACAGGTGCCTGAA 57.281 42.857 23.55 11.89 46.30 3.02
582 868 3.008923 TCAATTACATCACAGGTGCCTGA 59.991 43.478 23.55 4.01 46.30 3.86
584 870 3.009473 AGTCAATTACATCACAGGTGCCT 59.991 43.478 0.00 0.00 0.00 4.75
585 871 3.347216 AGTCAATTACATCACAGGTGCC 58.653 45.455 0.00 0.00 0.00 5.01
586 872 3.375299 GGAGTCAATTACATCACAGGTGC 59.625 47.826 0.00 0.00 0.00 5.01
587 873 4.578871 TGGAGTCAATTACATCACAGGTG 58.421 43.478 0.00 0.00 0.00 4.00
588 874 4.908601 TGGAGTCAATTACATCACAGGT 57.091 40.909 0.00 0.00 0.00 4.00
589 875 7.770433 TCTTAATGGAGTCAATTACATCACAGG 59.230 37.037 0.00 0.00 0.00 4.00
590 876 8.722480 TCTTAATGGAGTCAATTACATCACAG 57.278 34.615 0.00 0.00 0.00 3.66
591 877 8.946085 GTTCTTAATGGAGTCAATTACATCACA 58.054 33.333 0.00 0.00 0.00 3.58
592 878 9.167311 AGTTCTTAATGGAGTCAATTACATCAC 57.833 33.333 0.00 0.00 0.00 3.06
593 879 9.383519 GAGTTCTTAATGGAGTCAATTACATCA 57.616 33.333 0.00 0.00 0.00 3.07
594 880 9.606631 AGAGTTCTTAATGGAGTCAATTACATC 57.393 33.333 0.00 0.00 0.00 3.06
595 881 9.606631 GAGAGTTCTTAATGGAGTCAATTACAT 57.393 33.333 0.00 0.00 0.00 2.29
596 882 8.593679 TGAGAGTTCTTAATGGAGTCAATTACA 58.406 33.333 0.00 0.00 0.00 2.41
597 883 9.436957 TTGAGAGTTCTTAATGGAGTCAATTAC 57.563 33.333 0.00 0.00 0.00 1.89
598 884 9.436957 GTTGAGAGTTCTTAATGGAGTCAATTA 57.563 33.333 0.00 0.00 0.00 1.40
599 885 7.391833 GGTTGAGAGTTCTTAATGGAGTCAATT 59.608 37.037 0.00 0.00 0.00 2.32
600 886 6.881602 GGTTGAGAGTTCTTAATGGAGTCAAT 59.118 38.462 0.00 0.00 0.00 2.57
601 887 6.043243 AGGTTGAGAGTTCTTAATGGAGTCAA 59.957 38.462 0.00 0.00 0.00 3.18
602 888 5.544176 AGGTTGAGAGTTCTTAATGGAGTCA 59.456 40.000 0.00 0.00 0.00 3.41
603 889 6.043854 AGGTTGAGAGTTCTTAATGGAGTC 57.956 41.667 0.00 0.00 0.00 3.36
604 890 5.046231 GGAGGTTGAGAGTTCTTAATGGAGT 60.046 44.000 0.00 0.00 0.00 3.85
605 891 5.423886 GGAGGTTGAGAGTTCTTAATGGAG 58.576 45.833 0.00 0.00 0.00 3.86
606 892 4.081642 CGGAGGTTGAGAGTTCTTAATGGA 60.082 45.833 0.00 0.00 0.00 3.41
607 893 4.184629 CGGAGGTTGAGAGTTCTTAATGG 58.815 47.826 0.00 0.00 0.00 3.16
628 914 4.025401 GTTGCACGTTGGAGGCCG 62.025 66.667 0.00 0.00 0.00 6.13
630 916 1.444119 TTCTGTTGCACGTTGGAGGC 61.444 55.000 0.00 0.00 0.00 4.70
656 942 1.278127 TCTCCGTTTGGATGGAACCTC 59.722 52.381 0.00 0.00 45.33 3.85
689 975 1.040646 GGTCATCATCCGTGCCTCTA 58.959 55.000 0.00 0.00 0.00 2.43
707 993 0.105964 TGGCTTATTCGGGTCGATGG 59.894 55.000 0.00 0.00 35.23 3.51
712 998 1.507141 CGCCATGGCTTATTCGGGTC 61.507 60.000 33.07 1.19 39.32 4.46
748 1034 6.656693 TCATCATTTTCTTCTCCTTCCTTGTC 59.343 38.462 0.00 0.00 0.00 3.18
776 1062 3.532155 GGAGCGGTCGAGGCATCT 61.532 66.667 8.77 0.00 0.00 2.90
945 1255 1.073897 GGGTTTGGCTGCTGAGAGT 59.926 57.895 0.00 0.00 0.00 3.24
951 1261 3.090765 CTAGGGGGTTTGGCTGCT 58.909 61.111 0.00 0.00 0.00 4.24
954 1264 1.636769 GCTAGCTAGGGGGTTTGGCT 61.637 60.000 22.10 0.00 37.08 4.75
955 1265 1.152943 GCTAGCTAGGGGGTTTGGC 60.153 63.158 22.10 1.41 0.00 4.52
969 1290 4.201930 CGAACTGGTCTGGTTACTAGCTAG 60.202 50.000 19.44 19.44 31.57 3.42
970 1291 3.693085 CGAACTGGTCTGGTTACTAGCTA 59.307 47.826 0.00 0.00 31.57 3.32
971 1292 2.492484 CGAACTGGTCTGGTTACTAGCT 59.508 50.000 0.00 0.00 31.57 3.32
972 1293 2.230750 ACGAACTGGTCTGGTTACTAGC 59.769 50.000 0.00 0.00 31.57 3.42
973 1294 3.119566 GGACGAACTGGTCTGGTTACTAG 60.120 52.174 0.00 0.00 37.12 2.57
974 1295 2.821969 GGACGAACTGGTCTGGTTACTA 59.178 50.000 0.00 0.00 37.12 1.82
975 1296 1.617357 GGACGAACTGGTCTGGTTACT 59.383 52.381 0.00 0.00 37.12 2.24
976 1297 1.337541 GGGACGAACTGGTCTGGTTAC 60.338 57.143 0.00 0.00 37.12 2.50
977 1298 0.971386 GGGACGAACTGGTCTGGTTA 59.029 55.000 0.00 0.00 37.12 2.85
978 1299 1.052124 TGGGACGAACTGGTCTGGTT 61.052 55.000 0.00 0.00 37.12 3.67
979 1300 1.458777 TGGGACGAACTGGTCTGGT 60.459 57.895 0.00 0.00 37.12 4.00
1039 1360 3.134792 GGCGCACGGAGAGAGAGA 61.135 66.667 10.83 0.00 0.00 3.10
1144 1465 4.856607 GGCGACGGCGAGGAAGAG 62.857 72.222 18.90 0.00 41.24 2.85
1242 1563 1.811679 GAGCTTGCTGGCGAGGTAC 60.812 63.158 13.57 5.46 38.19 3.34
1425 1746 2.290464 CTGTACCAGGAGTCGAGGTAG 58.710 57.143 11.41 1.55 38.49 3.18
1791 2112 3.971109 GAACCCGTACAGGCTGCCC 62.971 68.421 16.57 4.00 39.21 5.36
1902 2223 1.957668 TCATCATCAGTGGAATGGCG 58.042 50.000 0.00 0.00 0.00 5.69
1979 2300 2.550180 TCATAGACTCTTCAGGCGATCG 59.450 50.000 11.69 11.69 29.68 3.69
1980 2301 4.217334 TCATCATAGACTCTTCAGGCGATC 59.783 45.833 0.00 0.00 29.68 3.69
1981 2302 4.148079 TCATCATAGACTCTTCAGGCGAT 58.852 43.478 0.00 0.00 29.68 4.58
1993 2314 5.947503 GCAGATCGCTATTCATCATAGAC 57.052 43.478 2.84 0.00 37.65 2.59
2089 2414 2.953648 TGCCATTTCCACTATCTGCATG 59.046 45.455 0.00 0.00 0.00 4.06
2093 2418 2.868583 CGAGTGCCATTTCCACTATCTG 59.131 50.000 0.00 0.00 43.17 2.90
2140 2477 1.811266 CTCACGAATGGCGGACCTG 60.811 63.158 0.00 0.00 46.49 4.00
2184 2577 0.247736 AGGATGAGCCACACGACTTC 59.752 55.000 0.00 0.00 40.02 3.01
2227 2621 6.475076 CGACAAGTAATTCAGAATGGAGAGAG 59.525 42.308 0.00 0.00 36.16 3.20
2228 2622 6.333416 CGACAAGTAATTCAGAATGGAGAGA 58.667 40.000 0.00 0.00 36.16 3.10
2230 2624 4.870426 GCGACAAGTAATTCAGAATGGAGA 59.130 41.667 0.00 0.00 36.16 3.71
2231 2625 4.631377 TGCGACAAGTAATTCAGAATGGAG 59.369 41.667 0.00 0.00 36.16 3.86
2232 2626 4.574892 TGCGACAAGTAATTCAGAATGGA 58.425 39.130 0.00 0.00 36.16 3.41
2233 2627 4.944962 TGCGACAAGTAATTCAGAATGG 57.055 40.909 0.00 0.00 36.16 3.16
2234 2628 5.931532 ACTTGCGACAAGTAATTCAGAATG 58.068 37.500 19.21 0.00 37.54 2.67
2235 2629 7.201644 CCATACTTGCGACAAGTAATTCAGAAT 60.202 37.037 25.44 12.38 36.45 2.40
2236 2630 6.092122 CCATACTTGCGACAAGTAATTCAGAA 59.908 38.462 25.44 11.09 36.45 3.02
2237 2631 5.580691 CCATACTTGCGACAAGTAATTCAGA 59.419 40.000 25.44 11.61 36.45 3.27
2238 2632 5.580691 TCCATACTTGCGACAAGTAATTCAG 59.419 40.000 25.44 16.48 36.45 3.02
2239 2633 5.483811 TCCATACTTGCGACAAGTAATTCA 58.516 37.500 25.44 12.66 36.45 2.57
2240 2634 6.037172 ACATCCATACTTGCGACAAGTAATTC 59.963 38.462 25.44 0.00 36.45 2.17
2241 2635 5.880332 ACATCCATACTTGCGACAAGTAATT 59.120 36.000 25.44 14.21 36.45 1.40
2242 2636 5.428253 ACATCCATACTTGCGACAAGTAAT 58.572 37.500 25.44 16.71 36.45 1.89
2243 2637 4.827692 ACATCCATACTTGCGACAAGTAA 58.172 39.130 25.44 15.64 36.45 2.24
2244 2638 4.465632 ACATCCATACTTGCGACAAGTA 57.534 40.909 24.52 24.52 37.18 2.24
2245 2639 3.334583 ACATCCATACTTGCGACAAGT 57.665 42.857 22.53 22.53 0.00 3.16
2246 2640 5.292765 AGATACATCCATACTTGCGACAAG 58.707 41.667 15.16 15.16 0.00 3.16
2247 2641 5.276461 AGATACATCCATACTTGCGACAA 57.724 39.130 0.00 0.00 0.00 3.18
2248 2642 4.937201 AGATACATCCATACTTGCGACA 57.063 40.909 0.00 0.00 0.00 4.35
2249 2643 6.255596 TCTAGATACATCCATACTTGCGAC 57.744 41.667 0.00 0.00 0.00 5.19
2250 2644 6.434340 ACATCTAGATACATCCATACTTGCGA 59.566 38.462 4.54 0.00 0.00 5.10
2251 2645 6.625362 ACATCTAGATACATCCATACTTGCG 58.375 40.000 4.54 0.00 0.00 4.85
2278 2672 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
2279 2673 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
2280 2674 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2281 2675 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2282 2676 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
2283 2677 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
2284 2678 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
2285 2679 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
2286 2680 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
2287 2681 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
2288 2682 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
2289 2683 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
2290 2684 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
2291 2685 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
2292 2686 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
2293 2687 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
2294 2688 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
2295 2689 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
2296 2690 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
2297 2691 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
2298 2692 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
2299 2693 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
2300 2694 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
2301 2695 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
2302 2696 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
2303 2697 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
2304 2698 2.598589 TCCGTTCCAAATTACTCGTCG 58.401 47.619 0.00 0.00 0.00 5.12
2305 2699 3.308866 CCATCCGTTCCAAATTACTCGTC 59.691 47.826 0.00 0.00 0.00 4.20
2306 2700 3.055675 TCCATCCGTTCCAAATTACTCGT 60.056 43.478 0.00 0.00 0.00 4.18
2307 2701 3.527533 TCCATCCGTTCCAAATTACTCG 58.472 45.455 0.00 0.00 0.00 4.18
2308 2702 4.514401 ACTCCATCCGTTCCAAATTACTC 58.486 43.478 0.00 0.00 0.00 2.59
2309 2703 4.569719 ACTCCATCCGTTCCAAATTACT 57.430 40.909 0.00 0.00 0.00 2.24
2310 2704 6.987992 TGTATACTCCATCCGTTCCAAATTAC 59.012 38.462 4.17 0.00 0.00 1.89
2311 2705 7.127012 TGTATACTCCATCCGTTCCAAATTA 57.873 36.000 4.17 0.00 0.00 1.40
2312 2706 5.996644 TGTATACTCCATCCGTTCCAAATT 58.003 37.500 4.17 0.00 0.00 1.82
2313 2707 5.623956 TGTATACTCCATCCGTTCCAAAT 57.376 39.130 4.17 0.00 0.00 2.32
2314 2708 5.423704 TTGTATACTCCATCCGTTCCAAA 57.576 39.130 4.17 0.00 0.00 3.28
2315 2709 5.423704 TTTGTATACTCCATCCGTTCCAA 57.576 39.130 4.17 0.00 0.00 3.53
2316 2710 5.623956 ATTTGTATACTCCATCCGTTCCA 57.376 39.130 4.17 0.00 0.00 3.53
2317 2711 6.518493 TGTATTTGTATACTCCATCCGTTCC 58.482 40.000 4.17 0.00 37.97 3.62
2318 2712 8.495949 CATTGTATTTGTATACTCCATCCGTTC 58.504 37.037 4.17 0.00 37.97 3.95
2319 2713 8.208224 TCATTGTATTTGTATACTCCATCCGTT 58.792 33.333 4.17 0.00 37.97 4.44
2320 2714 7.732025 TCATTGTATTTGTATACTCCATCCGT 58.268 34.615 4.17 0.00 37.97 4.69
2321 2715 8.777865 ATCATTGTATTTGTATACTCCATCCG 57.222 34.615 4.17 0.00 37.97 4.18
2325 2719 9.679661 ACACAATCATTGTATTTGTATACTCCA 57.320 29.630 1.72 0.00 43.23 3.86
2333 2727 8.296713 GGAGTACAACACAATCATTGTATTTGT 58.703 33.333 23.55 23.55 44.58 2.83
2334 2728 7.754924 GGGAGTACAACACAATCATTGTATTTG 59.245 37.037 17.14 17.14 43.23 2.32
2335 2729 7.669722 AGGGAGTACAACACAATCATTGTATTT 59.330 33.333 1.72 0.00 43.23 1.40
2336 2730 7.175104 AGGGAGTACAACACAATCATTGTATT 58.825 34.615 1.72 0.00 43.23 1.89
2340 2734 4.396166 GGAGGGAGTACAACACAATCATTG 59.604 45.833 0.00 0.00 0.00 2.82
2346 2740 1.416243 ACGGAGGGAGTACAACACAA 58.584 50.000 0.00 0.00 0.00 3.33
2353 2747 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
2354 2748 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
2355 2749 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
2356 2750 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
2357 2751 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
2358 2752 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2359 2753 2.968675 ACGAGTAATTTGGAACGGAGG 58.031 47.619 0.00 0.00 0.00 4.30
2360 2754 3.744426 ACAACGAGTAATTTGGAACGGAG 59.256 43.478 0.00 0.00 0.00 4.63
2361 2755 3.495377 CACAACGAGTAATTTGGAACGGA 59.505 43.478 0.00 0.00 0.00 4.69
2362 2756 3.364565 CCACAACGAGTAATTTGGAACGG 60.365 47.826 0.00 0.00 0.00 4.44
2363 2757 3.249080 ACCACAACGAGTAATTTGGAACG 59.751 43.478 0.00 0.00 0.00 3.95
2364 2758 4.823790 ACCACAACGAGTAATTTGGAAC 57.176 40.909 0.00 0.00 0.00 3.62
2365 2759 5.838531 AAACCACAACGAGTAATTTGGAA 57.161 34.783 0.00 0.00 0.00 3.53
2366 2760 5.838531 AAAACCACAACGAGTAATTTGGA 57.161 34.783 0.00 0.00 0.00 3.53
2367 2761 6.731164 ACTAAAACCACAACGAGTAATTTGG 58.269 36.000 0.00 0.00 0.00 3.28
2368 2762 7.911205 TGAACTAAAACCACAACGAGTAATTTG 59.089 33.333 0.00 0.00 0.00 2.32
2369 2763 7.987649 TGAACTAAAACCACAACGAGTAATTT 58.012 30.769 0.00 0.00 0.00 1.82
2370 2764 7.556733 TGAACTAAAACCACAACGAGTAATT 57.443 32.000 0.00 0.00 0.00 1.40
2371 2765 7.556733 TTGAACTAAAACCACAACGAGTAAT 57.443 32.000 0.00 0.00 0.00 1.89
2372 2766 6.981762 TTGAACTAAAACCACAACGAGTAA 57.018 33.333 0.00 0.00 0.00 2.24
2373 2767 6.981762 TTTGAACTAAAACCACAACGAGTA 57.018 33.333 0.00 0.00 0.00 2.59
2374 2768 5.883503 TTTGAACTAAAACCACAACGAGT 57.116 34.783 0.00 0.00 0.00 4.18
2375 2769 7.749539 AAATTTGAACTAAAACCACAACGAG 57.250 32.000 0.00 0.00 0.00 4.18
2376 2770 7.813148 TCAAAATTTGAACTAAAACCACAACGA 59.187 29.630 5.87 0.00 36.59 3.85
2377 2771 7.954447 TCAAAATTTGAACTAAAACCACAACG 58.046 30.769 5.87 0.00 36.59 4.10
2391 2785 8.738554 CGTCGTGATTTTAGTTCAAAATTTGAA 58.261 29.630 16.28 16.28 44.98 2.69
2392 2786 8.123575 TCGTCGTGATTTTAGTTCAAAATTTGA 58.876 29.630 4.03 4.03 44.98 2.69
2393 2787 8.264022 TCGTCGTGATTTTAGTTCAAAATTTG 57.736 30.769 0.00 0.00 44.98 2.32
2394 2788 8.126700 ACTCGTCGTGATTTTAGTTCAAAATTT 58.873 29.630 0.56 0.00 44.98 1.82
2395 2789 7.636326 ACTCGTCGTGATTTTAGTTCAAAATT 58.364 30.769 0.56 0.00 44.98 1.82
2397 2791 6.592798 ACTCGTCGTGATTTTAGTTCAAAA 57.407 33.333 0.56 0.00 40.34 2.44
2398 2792 6.592798 AACTCGTCGTGATTTTAGTTCAAA 57.407 33.333 0.56 0.00 0.00 2.69
2399 2793 6.592798 AAACTCGTCGTGATTTTAGTTCAA 57.407 33.333 0.56 0.00 28.64 2.69
2400 2794 6.592798 AAAACTCGTCGTGATTTTAGTTCA 57.407 33.333 0.56 0.00 30.13 3.18
2404 2798 7.780313 TGAACTAAAACTCGTCGTGATTTTAG 58.220 34.615 22.80 22.80 44.58 1.85
2405 2799 7.697352 TGAACTAAAACTCGTCGTGATTTTA 57.303 32.000 7.67 9.70 30.13 1.52
2406 2800 6.592798 TGAACTAAAACTCGTCGTGATTTT 57.407 33.333 7.67 9.21 31.42 1.82
2407 2801 6.592798 TTGAACTAAAACTCGTCGTGATTT 57.407 33.333 0.56 4.69 0.00 2.17
2408 2802 6.592798 TTTGAACTAAAACTCGTCGTGATT 57.407 33.333 0.56 0.00 0.00 2.57
2409 2803 6.780706 ATTTGAACTAAAACTCGTCGTGAT 57.219 33.333 0.56 0.00 0.00 3.06
2410 2804 6.592798 AATTTGAACTAAAACTCGTCGTGA 57.407 33.333 0.56 0.00 0.00 4.35
2411 2805 7.427030 TCAAAATTTGAACTAAAACTCGTCGTG 59.573 33.333 5.87 0.00 36.59 4.35
2412 2806 7.465989 TCAAAATTTGAACTAAAACTCGTCGT 58.534 30.769 5.87 0.00 36.59 4.34
2413 2807 7.886191 TCAAAATTTGAACTAAAACTCGTCG 57.114 32.000 5.87 0.00 36.59 5.12
2426 2820 7.008447 CGTCGTGGTTTTAGTTCAAAATTTGAA 59.992 33.333 16.28 16.28 46.68 2.69
2427 2821 6.469595 CGTCGTGGTTTTAGTTCAAAATTTGA 59.530 34.615 4.03 4.03 38.36 2.69
2428 2822 6.469595 TCGTCGTGGTTTTAGTTCAAAATTTG 59.530 34.615 0.00 0.00 38.36 2.32
2429 2823 6.553524 TCGTCGTGGTTTTAGTTCAAAATTT 58.446 32.000 0.00 0.00 38.36 1.82
2430 2824 6.121613 TCGTCGTGGTTTTAGTTCAAAATT 57.878 33.333 0.00 0.00 38.36 1.82
2431 2825 5.295045 ACTCGTCGTGGTTTTAGTTCAAAAT 59.705 36.000 0.00 0.00 38.36 1.82
2432 2826 4.630940 ACTCGTCGTGGTTTTAGTTCAAAA 59.369 37.500 0.00 0.00 33.66 2.44
2433 2827 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
2434 2828 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
2435 2829 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
2436 2830 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
2437 2831 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
2438 2832 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
2439 2833 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
2440 2834 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
2441 2835 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
2442 2836 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
2443 2837 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
2444 2838 3.062042 GTTCCAAATTACTCGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
2445 2839 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
2446 2840 2.091588 CCGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
2447 2841 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
2448 2842 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
2449 2843 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
2450 2844 2.564062 TCCTCCGTTCCAAATTACTCGT 59.436 45.455 0.00 0.00 0.00 4.18
2451 2845 3.241067 TCCTCCGTTCCAAATTACTCG 57.759 47.619 0.00 0.00 0.00 4.18
2452 2846 4.576879 ACTTCCTCCGTTCCAAATTACTC 58.423 43.478 0.00 0.00 0.00 2.59
2453 2847 4.635699 ACTTCCTCCGTTCCAAATTACT 57.364 40.909 0.00 0.00 0.00 2.24
2454 2848 6.110707 TCATACTTCCTCCGTTCCAAATTAC 58.889 40.000 0.00 0.00 0.00 1.89
2455 2849 6.302535 TCATACTTCCTCCGTTCCAAATTA 57.697 37.500 0.00 0.00 0.00 1.40
2456 2850 5.174037 TCATACTTCCTCCGTTCCAAATT 57.826 39.130 0.00 0.00 0.00 1.82
2457 2851 4.837093 TCATACTTCCTCCGTTCCAAAT 57.163 40.909 0.00 0.00 0.00 2.32
2458 2852 4.627284 TTCATACTTCCTCCGTTCCAAA 57.373 40.909 0.00 0.00 0.00 3.28
2459 2853 4.627284 TTTCATACTTCCTCCGTTCCAA 57.373 40.909 0.00 0.00 0.00 3.53
2460 2854 4.837093 ATTTCATACTTCCTCCGTTCCA 57.163 40.909 0.00 0.00 0.00 3.53
2461 2855 6.346896 ACTTATTTCATACTTCCTCCGTTCC 58.653 40.000 0.00 0.00 0.00 3.62
2462 2856 7.548075 TCAACTTATTTCATACTTCCTCCGTTC 59.452 37.037 0.00 0.00 0.00 3.95
2463 2857 7.391620 TCAACTTATTTCATACTTCCTCCGTT 58.608 34.615 0.00 0.00 0.00 4.44
2464 2858 6.942976 TCAACTTATTTCATACTTCCTCCGT 58.057 36.000 0.00 0.00 0.00 4.69
2465 2859 7.843490 TTCAACTTATTTCATACTTCCTCCG 57.157 36.000 0.00 0.00 0.00 4.63
2466 2860 9.396022 TCATTCAACTTATTTCATACTTCCTCC 57.604 33.333 0.00 0.00 0.00 4.30
2585 2983 3.726557 AGTGAATGATGGCCTTCTTCA 57.273 42.857 18.67 19.48 34.63 3.02
2588 2986 6.183360 CGATTTTAAGTGAATGATGGCCTTCT 60.183 38.462 18.67 0.11 0.00 2.85
2618 3016 5.182001 GGATACAGAGCACTGAACACAAATT 59.818 40.000 18.54 0.00 46.03 1.82
2692 3090 8.843262 TGGAAGCATATCATTCAACTATTCAAG 58.157 33.333 0.00 0.00 0.00 3.02
2694 3092 8.750515 TTGGAAGCATATCATTCAACTATTCA 57.249 30.769 0.00 0.00 0.00 2.57
2695 3093 9.622004 CATTGGAAGCATATCATTCAACTATTC 57.378 33.333 0.00 0.00 0.00 1.75
2696 3094 8.086522 GCATTGGAAGCATATCATTCAACTATT 58.913 33.333 0.00 0.00 0.00 1.73
2697 3095 7.450634 AGCATTGGAAGCATATCATTCAACTAT 59.549 33.333 0.00 0.00 0.00 2.12
2698 3096 6.774170 AGCATTGGAAGCATATCATTCAACTA 59.226 34.615 0.00 0.00 0.00 2.24
2699 3097 5.597182 AGCATTGGAAGCATATCATTCAACT 59.403 36.000 0.00 0.00 0.00 3.16
2700 3098 5.839621 AGCATTGGAAGCATATCATTCAAC 58.160 37.500 0.00 0.00 0.00 3.18
2701 3099 6.999871 TCTAGCATTGGAAGCATATCATTCAA 59.000 34.615 0.00 0.00 0.00 2.69
2702 3100 6.536447 TCTAGCATTGGAAGCATATCATTCA 58.464 36.000 0.00 0.00 0.00 2.57
2788 3186 4.901868 TGTTATTAGTCGGAGCCAAAAGT 58.098 39.130 0.00 0.00 0.00 2.66
2816 3218 4.946784 ATTTTCTTGCTTCGCTCGTAAT 57.053 36.364 0.00 0.00 0.00 1.89
2817 3219 4.092383 GGTATTTTCTTGCTTCGCTCGTAA 59.908 41.667 0.00 0.00 0.00 3.18
2820 3222 2.534939 CGGTATTTTCTTGCTTCGCTCG 60.535 50.000 0.00 0.00 0.00 5.03
2827 3229 5.336451 GGTTTGATTCCGGTATTTTCTTGCT 60.336 40.000 0.00 0.00 0.00 3.91
2840 3242 1.662876 CGTGCTTGTGGTTTGATTCCG 60.663 52.381 0.00 0.00 0.00 4.30
2842 3244 1.606668 TCCGTGCTTGTGGTTTGATTC 59.393 47.619 0.00 0.00 0.00 2.52
2844 3246 0.951558 GTCCGTGCTTGTGGTTTGAT 59.048 50.000 0.00 0.00 0.00 2.57
2845 3247 0.393132 TGTCCGTGCTTGTGGTTTGA 60.393 50.000 0.00 0.00 0.00 2.69
2846 3248 0.453793 TTGTCCGTGCTTGTGGTTTG 59.546 50.000 0.00 0.00 0.00 2.93
2847 3249 0.738389 CTTGTCCGTGCTTGTGGTTT 59.262 50.000 0.00 0.00 0.00 3.27
2853 3255 0.387622 CCAATGCTTGTCCGTGCTTG 60.388 55.000 0.00 0.00 0.00 4.01
2856 3258 2.126346 GCCAATGCTTGTCCGTGC 60.126 61.111 0.00 0.00 33.53 5.34
2859 3261 2.203972 CTGTGGCCAATGCTTGTCCG 62.204 60.000 7.24 0.00 37.74 4.79
2863 3265 2.754946 ATTTCTGTGGCCAATGCTTG 57.245 45.000 7.24 0.00 37.74 4.01
2866 3268 3.684305 GGTTTTATTTCTGTGGCCAATGC 59.316 43.478 7.24 0.00 0.00 3.56
2873 3275 5.637006 TCCATTCGGTTTTATTTCTGTGG 57.363 39.130 0.00 0.00 0.00 4.17
2882 3284 2.356135 GCTCAGCTCCATTCGGTTTTA 58.644 47.619 0.00 0.00 0.00 1.52
2897 3299 2.224281 TGTGGAACTTGTGTAGGCTCAG 60.224 50.000 0.00 0.00 38.04 3.35
2898 3300 1.765904 TGTGGAACTTGTGTAGGCTCA 59.234 47.619 0.00 0.00 38.04 4.26
2957 3366 5.182570 TCAAGGAGCTTGTTGAATTGATCTG 59.817 40.000 8.77 0.00 41.66 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.