Multiple sequence alignment - TraesCS3A01G439100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G439100 chr3A 100.000 2754 0 0 366 3119 682324138 682326891 0.000000e+00 5086.0
1 TraesCS3A01G439100 chr3A 100.000 149 0 0 1 149 682323773 682323921 3.060000e-70 276.0
2 TraesCS3A01G439100 chr3A 96.970 132 4 0 1616 1747 682325322 682325453 4.050000e-54 222.0
3 TraesCS3A01G439100 chr3A 96.970 132 4 0 1550 1681 682325388 682325519 4.050000e-54 222.0
4 TraesCS3A01G439100 chr3A 93.939 66 4 0 368 433 476864279 476864344 1.980000e-17 100.0
5 TraesCS3A01G439100 chr3B 89.910 1437 83 26 1690 3119 722358452 722359833 0.000000e+00 1794.0
6 TraesCS3A01G439100 chr3B 91.918 631 41 8 810 1435 722357671 722358296 0.000000e+00 874.0
7 TraesCS3A01G439100 chr3B 92.617 149 11 0 1 149 496633606 496633458 6.770000e-52 215.0
8 TraesCS3A01G439100 chr3B 84.564 149 7 2 1 149 738312905 738313037 1.950000e-27 134.0
9 TraesCS3A01G439100 chr3D 90.157 1148 69 18 491 1615 545912499 545913625 0.000000e+00 1454.0
10 TraesCS3A01G439100 chr3D 93.228 694 40 5 1684 2374 545913562 545914251 0.000000e+00 1014.0
11 TraesCS3A01G439100 chr3D 91.556 675 33 3 2389 3061 545914320 545914972 0.000000e+00 909.0
12 TraesCS3A01G439100 chr3D 89.855 69 7 0 368 436 418357054 418356986 4.280000e-14 89.8
13 TraesCS3A01G439100 chr2B 89.262 149 11 2 1 149 793751443 793751300 6.870000e-42 182.0
14 TraesCS3A01G439100 chr2B 94.030 67 3 1 368 433 793751100 793751034 1.980000e-17 100.0
15 TraesCS3A01G439100 chr7D 94.048 84 5 0 66 149 578430060 578429977 9.080000e-26 128.0
16 TraesCS3A01G439100 chr7D 94.048 84 5 0 66 149 578431512 578431429 9.080000e-26 128.0
17 TraesCS3A01G439100 chr7D 94.048 84 5 0 66 149 578432958 578432875 9.080000e-26 128.0
18 TraesCS3A01G439100 chr7D 94.048 84 5 0 66 149 578434404 578434321 9.080000e-26 128.0
19 TraesCS3A01G439100 chr7D 94.048 84 5 0 66 149 578435856 578435773 9.080000e-26 128.0
20 TraesCS3A01G439100 chr7D 94.048 84 5 0 66 149 578437309 578437226 9.080000e-26 128.0
21 TraesCS3A01G439100 chr7D 94.048 84 5 0 66 149 578438744 578438661 9.080000e-26 128.0
22 TraesCS3A01G439100 chr6A 87.879 66 8 0 368 433 99214698 99214633 9.270000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G439100 chr3A 682323773 682326891 3118 False 1451.500000 5086 98.485 1 3119 4 chr3A.!!$F2 3118
1 TraesCS3A01G439100 chr3B 722357671 722359833 2162 False 1334.000000 1794 90.914 810 3119 2 chr3B.!!$F2 2309
2 TraesCS3A01G439100 chr3D 545912499 545914972 2473 False 1125.666667 1454 91.647 491 3061 3 chr3D.!!$F1 2570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.029834 CTGTTGTGCACTTGTGCTCC 59.970 55.0 23.53 15.41 35.49 4.70 F
448 449 0.035317 TTGAACTCTCGCACATGCCT 59.965 50.0 0.00 0.00 37.91 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1922 1984 0.032217 AGGAGGAGGAGGAGCTGAAG 60.032 60.0 0.00 0.0 0.0 3.02 R
2170 2235 0.972983 ACTCACATACTGGCGCTCCT 60.973 55.0 7.64 0.0 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.406648 TGTGCTGCTAATATACTGCTGT 57.593 40.909 0.00 0.66 0.00 4.40
22 23 4.769688 TGTGCTGCTAATATACTGCTGTT 58.230 39.130 0.09 0.00 0.00 3.16
23 24 4.571984 TGTGCTGCTAATATACTGCTGTTG 59.428 41.667 0.09 0.00 0.00 3.33
24 25 4.572389 GTGCTGCTAATATACTGCTGTTGT 59.428 41.667 0.09 0.00 0.00 3.32
25 26 4.571984 TGCTGCTAATATACTGCTGTTGTG 59.428 41.667 0.09 0.00 0.00 3.33
26 27 4.553547 GCTGCTAATATACTGCTGTTGTGC 60.554 45.833 0.09 0.01 0.00 4.57
27 28 4.512484 TGCTAATATACTGCTGTTGTGCA 58.488 39.130 0.09 2.53 41.05 4.57
28 29 4.332543 TGCTAATATACTGCTGTTGTGCAC 59.667 41.667 10.75 10.75 38.12 4.57
29 30 4.572389 GCTAATATACTGCTGTTGTGCACT 59.428 41.667 19.41 0.00 38.12 4.40
30 31 5.065218 GCTAATATACTGCTGTTGTGCACTT 59.935 40.000 19.41 1.31 38.12 3.16
31 32 4.952262 ATATACTGCTGTTGTGCACTTG 57.048 40.909 19.41 6.50 38.12 3.16
32 33 2.036958 TACTGCTGTTGTGCACTTGT 57.963 45.000 19.41 8.43 38.12 3.16
33 34 0.452987 ACTGCTGTTGTGCACTTGTG 59.547 50.000 19.41 7.22 38.12 3.33
34 35 0.868602 CTGCTGTTGTGCACTTGTGC 60.869 55.000 19.41 17.73 38.12 4.57
35 36 1.314534 TGCTGTTGTGCACTTGTGCT 61.315 50.000 23.53 0.00 38.12 4.40
36 37 0.593263 GCTGTTGTGCACTTGTGCTC 60.593 55.000 23.53 20.43 35.49 4.26
37 38 0.029834 CTGTTGTGCACTTGTGCTCC 59.970 55.000 23.53 15.41 35.49 4.70
38 39 0.394216 TGTTGTGCACTTGTGCTCCT 60.394 50.000 23.53 0.00 35.49 3.69
39 40 0.308993 GTTGTGCACTTGTGCTCCTC 59.691 55.000 23.53 13.00 35.49 3.71
40 41 0.181114 TTGTGCACTTGTGCTCCTCT 59.819 50.000 23.53 0.00 35.49 3.69
41 42 0.181114 TGTGCACTTGTGCTCCTCTT 59.819 50.000 23.53 0.00 35.49 2.85
42 43 1.312815 GTGCACTTGTGCTCCTCTTT 58.687 50.000 23.53 0.00 35.49 2.52
43 44 1.678101 GTGCACTTGTGCTCCTCTTTT 59.322 47.619 23.53 0.00 35.49 2.27
44 45 2.878406 GTGCACTTGTGCTCCTCTTTTA 59.122 45.455 23.53 0.52 35.49 1.52
45 46 2.878406 TGCACTTGTGCTCCTCTTTTAC 59.122 45.455 23.53 0.00 35.49 2.01
46 47 3.142174 GCACTTGTGCTCCTCTTTTACT 58.858 45.455 17.36 0.00 0.00 2.24
47 48 3.565902 GCACTTGTGCTCCTCTTTTACTT 59.434 43.478 17.36 0.00 0.00 2.24
48 49 4.755123 GCACTTGTGCTCCTCTTTTACTTA 59.245 41.667 17.36 0.00 0.00 2.24
49 50 5.412904 GCACTTGTGCTCCTCTTTTACTTAT 59.587 40.000 17.36 0.00 0.00 1.73
50 51 6.621596 GCACTTGTGCTCCTCTTTTACTTATG 60.622 42.308 17.36 0.00 0.00 1.90
51 52 5.412904 ACTTGTGCTCCTCTTTTACTTATGC 59.587 40.000 0.00 0.00 0.00 3.14
52 53 4.261801 TGTGCTCCTCTTTTACTTATGCC 58.738 43.478 0.00 0.00 0.00 4.40
53 54 4.261801 GTGCTCCTCTTTTACTTATGCCA 58.738 43.478 0.00 0.00 0.00 4.92
54 55 4.700213 GTGCTCCTCTTTTACTTATGCCAA 59.300 41.667 0.00 0.00 0.00 4.52
55 56 5.358160 GTGCTCCTCTTTTACTTATGCCAAT 59.642 40.000 0.00 0.00 0.00 3.16
56 57 6.542370 GTGCTCCTCTTTTACTTATGCCAATA 59.458 38.462 0.00 0.00 0.00 1.90
57 58 7.229506 GTGCTCCTCTTTTACTTATGCCAATAT 59.770 37.037 0.00 0.00 0.00 1.28
58 59 8.436778 TGCTCCTCTTTTACTTATGCCAATATA 58.563 33.333 0.00 0.00 0.00 0.86
59 60 8.722394 GCTCCTCTTTTACTTATGCCAATATAC 58.278 37.037 0.00 0.00 0.00 1.47
70 71 8.567948 ACTTATGCCAATATACTATTGTTGTGC 58.432 33.333 6.23 3.62 0.00 4.57
71 72 6.957920 ATGCCAATATACTATTGTTGTGCA 57.042 33.333 9.42 9.42 34.63 4.57
72 73 6.130298 TGCCAATATACTATTGTTGTGCAC 57.870 37.500 10.75 10.75 0.00 4.57
73 74 5.885352 TGCCAATATACTATTGTTGTGCACT 59.115 36.000 19.41 0.00 0.00 4.40
74 75 6.376864 TGCCAATATACTATTGTTGTGCACTT 59.623 34.615 19.41 0.00 0.00 3.16
75 76 6.692681 GCCAATATACTATTGTTGTGCACTTG 59.307 38.462 19.41 8.83 0.00 3.16
76 77 7.628366 GCCAATATACTATTGTTGTGCACTTGT 60.628 37.037 19.41 6.87 0.00 3.16
77 78 7.697710 CCAATATACTATTGTTGTGCACTTGTG 59.302 37.037 19.41 4.50 0.00 3.33
78 79 3.354089 ACTATTGTTGTGCACTTGTGC 57.646 42.857 19.41 17.73 0.00 4.57
79 80 2.951642 ACTATTGTTGTGCACTTGTGCT 59.048 40.909 23.53 6.91 35.49 4.40
80 81 2.965572 ATTGTTGTGCACTTGTGCTT 57.034 40.000 23.53 0.00 35.49 3.91
81 82 2.276472 TTGTTGTGCACTTGTGCTTC 57.724 45.000 23.53 17.05 35.49 3.86
82 83 1.462616 TGTTGTGCACTTGTGCTTCT 58.537 45.000 23.53 0.00 35.49 2.85
83 84 1.401552 TGTTGTGCACTTGTGCTTCTC 59.598 47.619 23.53 13.34 35.49 2.87
84 85 1.672881 GTTGTGCACTTGTGCTTCTCT 59.327 47.619 23.53 0.00 35.49 3.10
85 86 2.042686 TGTGCACTTGTGCTTCTCTT 57.957 45.000 23.53 0.00 35.49 2.85
86 87 2.368439 TGTGCACTTGTGCTTCTCTTT 58.632 42.857 23.53 0.00 35.49 2.52
87 88 2.754552 TGTGCACTTGTGCTTCTCTTTT 59.245 40.909 23.53 0.00 35.49 2.27
88 89 3.944650 TGTGCACTTGTGCTTCTCTTTTA 59.055 39.130 23.53 0.52 35.49 1.52
89 90 4.201910 TGTGCACTTGTGCTTCTCTTTTAC 60.202 41.667 23.53 12.13 35.49 2.01
90 91 4.035675 GTGCACTTGTGCTTCTCTTTTACT 59.964 41.667 23.53 0.00 35.49 2.24
91 92 4.035558 TGCACTTGTGCTTCTCTTTTACTG 59.964 41.667 23.53 0.00 35.49 2.74
92 93 4.035675 GCACTTGTGCTTCTCTTTTACTGT 59.964 41.667 17.36 0.00 0.00 3.55
93 94 5.449177 GCACTTGTGCTTCTCTTTTACTGTT 60.449 40.000 17.36 0.00 0.00 3.16
94 95 5.967674 CACTTGTGCTTCTCTTTTACTGTTG 59.032 40.000 0.00 0.00 0.00 3.33
95 96 5.648092 ACTTGTGCTTCTCTTTTACTGTTGT 59.352 36.000 0.00 0.00 0.00 3.32
96 97 6.151144 ACTTGTGCTTCTCTTTTACTGTTGTT 59.849 34.615 0.00 0.00 0.00 2.83
97 98 6.509418 TGTGCTTCTCTTTTACTGTTGTTT 57.491 33.333 0.00 0.00 0.00 2.83
98 99 6.919721 TGTGCTTCTCTTTTACTGTTGTTTT 58.080 32.000 0.00 0.00 0.00 2.43
99 100 6.806249 TGTGCTTCTCTTTTACTGTTGTTTTG 59.194 34.615 0.00 0.00 0.00 2.44
100 101 6.806739 GTGCTTCTCTTTTACTGTTGTTTTGT 59.193 34.615 0.00 0.00 0.00 2.83
101 102 7.328493 GTGCTTCTCTTTTACTGTTGTTTTGTT 59.672 33.333 0.00 0.00 0.00 2.83
102 103 7.328249 TGCTTCTCTTTTACTGTTGTTTTGTTG 59.672 33.333 0.00 0.00 0.00 3.33
103 104 7.328493 GCTTCTCTTTTACTGTTGTTTTGTTGT 59.672 33.333 0.00 0.00 0.00 3.32
104 105 9.191995 CTTCTCTTTTACTGTTGTTTTGTTGTT 57.808 29.630 0.00 0.00 0.00 2.83
105 106 8.514136 TCTCTTTTACTGTTGTTTTGTTGTTG 57.486 30.769 0.00 0.00 0.00 3.33
106 107 8.138712 TCTCTTTTACTGTTGTTTTGTTGTTGT 58.861 29.630 0.00 0.00 0.00 3.32
107 108 8.649973 TCTTTTACTGTTGTTTTGTTGTTGTT 57.350 26.923 0.00 0.00 0.00 2.83
108 109 8.543774 TCTTTTACTGTTGTTTTGTTGTTGTTG 58.456 29.630 0.00 0.00 0.00 3.33
109 110 6.771188 TTACTGTTGTTTTGTTGTTGTTGG 57.229 33.333 0.00 0.00 0.00 3.77
110 111 4.698575 ACTGTTGTTTTGTTGTTGTTGGT 58.301 34.783 0.00 0.00 0.00 3.67
111 112 5.844004 ACTGTTGTTTTGTTGTTGTTGGTA 58.156 33.333 0.00 0.00 0.00 3.25
112 113 6.459923 ACTGTTGTTTTGTTGTTGTTGGTAT 58.540 32.000 0.00 0.00 0.00 2.73
113 114 6.588373 ACTGTTGTTTTGTTGTTGTTGGTATC 59.412 34.615 0.00 0.00 0.00 2.24
114 115 5.869888 TGTTGTTTTGTTGTTGTTGGTATCC 59.130 36.000 0.00 0.00 0.00 2.59
115 116 5.661056 TGTTTTGTTGTTGTTGGTATCCA 57.339 34.783 0.00 0.00 0.00 3.41
116 117 6.227298 TGTTTTGTTGTTGTTGGTATCCAT 57.773 33.333 0.00 0.00 31.53 3.41
117 118 6.045318 TGTTTTGTTGTTGTTGGTATCCATG 58.955 36.000 0.00 0.00 31.53 3.66
118 119 4.862902 TTGTTGTTGTTGGTATCCATGG 57.137 40.909 4.97 4.97 31.53 3.66
119 120 4.105754 TGTTGTTGTTGGTATCCATGGA 57.894 40.909 18.88 18.88 31.53 3.41
120 121 4.078537 TGTTGTTGTTGGTATCCATGGAG 58.921 43.478 21.33 0.00 31.53 3.86
121 122 4.202514 TGTTGTTGTTGGTATCCATGGAGA 60.203 41.667 21.33 13.69 31.53 3.71
122 123 4.860802 TGTTGTTGGTATCCATGGAGAT 57.139 40.909 21.33 6.86 31.53 2.75
123 124 4.780815 TGTTGTTGGTATCCATGGAGATC 58.219 43.478 21.33 17.13 31.53 2.75
124 125 4.137543 GTTGTTGGTATCCATGGAGATCC 58.862 47.826 21.33 20.24 31.53 3.36
125 126 2.711009 TGTTGGTATCCATGGAGATCCC 59.289 50.000 21.33 14.37 31.53 3.85
126 127 2.040412 GTTGGTATCCATGGAGATCCCC 59.960 54.545 21.33 13.64 31.53 4.81
127 128 1.225431 TGGTATCCATGGAGATCCCCA 59.775 52.381 21.33 16.15 41.05 4.96
142 143 3.157680 CCATGGGGATCGGGTACC 58.842 66.667 2.85 2.17 41.13 3.34
416 417 3.480133 CCCCCGGTGATCCCTGTC 61.480 72.222 0.00 0.00 0.00 3.51
417 418 2.365635 CCCCGGTGATCCCTGTCT 60.366 66.667 0.00 0.00 0.00 3.41
418 419 2.435693 CCCCGGTGATCCCTGTCTC 61.436 68.421 0.00 0.00 0.00 3.36
419 420 2.435693 CCCGGTGATCCCTGTCTCC 61.436 68.421 0.00 0.00 0.00 3.71
420 421 2.808315 CGGTGATCCCTGTCTCCG 59.192 66.667 3.46 3.46 45.22 4.63
421 422 2.052690 CGGTGATCCCTGTCTCCGT 61.053 63.158 8.70 0.00 45.35 4.69
422 423 1.605058 CGGTGATCCCTGTCTCCGTT 61.605 60.000 8.70 0.00 45.35 4.44
423 424 0.108138 GGTGATCCCTGTCTCCGTTG 60.108 60.000 0.00 0.00 0.00 4.10
424 425 0.741221 GTGATCCCTGTCTCCGTTGC 60.741 60.000 0.00 0.00 0.00 4.17
425 426 1.153349 GATCCCTGTCTCCGTTGCC 60.153 63.158 0.00 0.00 0.00 4.52
426 427 1.899437 GATCCCTGTCTCCGTTGCCA 61.899 60.000 0.00 0.00 0.00 4.92
427 428 1.274703 ATCCCTGTCTCCGTTGCCAT 61.275 55.000 0.00 0.00 0.00 4.40
428 429 1.002134 CCCTGTCTCCGTTGCCATT 60.002 57.895 0.00 0.00 0.00 3.16
429 430 0.609131 CCCTGTCTCCGTTGCCATTT 60.609 55.000 0.00 0.00 0.00 2.32
430 431 1.247567 CCTGTCTCCGTTGCCATTTT 58.752 50.000 0.00 0.00 0.00 1.82
431 432 1.068333 CCTGTCTCCGTTGCCATTTTG 60.068 52.381 0.00 0.00 0.00 2.44
432 433 1.879380 CTGTCTCCGTTGCCATTTTGA 59.121 47.619 0.00 0.00 0.00 2.69
433 434 2.293122 CTGTCTCCGTTGCCATTTTGAA 59.707 45.455 0.00 0.00 0.00 2.69
434 435 2.034053 TGTCTCCGTTGCCATTTTGAAC 59.966 45.455 0.00 0.00 0.00 3.18
435 436 2.293399 GTCTCCGTTGCCATTTTGAACT 59.707 45.455 0.00 0.00 0.00 3.01
436 437 2.552315 TCTCCGTTGCCATTTTGAACTC 59.448 45.455 0.00 0.00 0.00 3.01
437 438 2.554032 CTCCGTTGCCATTTTGAACTCT 59.446 45.455 0.00 0.00 0.00 3.24
438 439 2.552315 TCCGTTGCCATTTTGAACTCTC 59.448 45.455 0.00 0.00 0.00 3.20
439 440 2.574322 CGTTGCCATTTTGAACTCTCG 58.426 47.619 0.00 0.00 0.00 4.04
440 441 2.319472 GTTGCCATTTTGAACTCTCGC 58.681 47.619 0.00 0.00 0.00 5.03
441 442 1.603456 TGCCATTTTGAACTCTCGCA 58.397 45.000 0.00 0.00 0.00 5.10
442 443 1.266718 TGCCATTTTGAACTCTCGCAC 59.733 47.619 0.00 0.00 0.00 5.34
443 444 1.266718 GCCATTTTGAACTCTCGCACA 59.733 47.619 0.00 0.00 0.00 4.57
444 445 2.095059 GCCATTTTGAACTCTCGCACAT 60.095 45.455 0.00 0.00 0.00 3.21
445 446 3.495193 CCATTTTGAACTCTCGCACATG 58.505 45.455 0.00 0.00 0.00 3.21
446 447 2.686558 TTTTGAACTCTCGCACATGC 57.313 45.000 0.00 0.00 37.78 4.06
447 448 0.874390 TTTGAACTCTCGCACATGCC 59.126 50.000 0.00 0.00 37.91 4.40
448 449 0.035317 TTGAACTCTCGCACATGCCT 59.965 50.000 0.00 0.00 37.91 4.75
449 450 0.671472 TGAACTCTCGCACATGCCTG 60.671 55.000 0.00 0.00 37.91 4.85
450 451 0.390340 GAACTCTCGCACATGCCTGA 60.390 55.000 0.00 0.00 37.91 3.86
451 452 0.251354 AACTCTCGCACATGCCTGAT 59.749 50.000 0.00 0.00 37.91 2.90
452 453 1.114627 ACTCTCGCACATGCCTGATA 58.885 50.000 0.00 0.00 37.91 2.15
453 454 1.202463 ACTCTCGCACATGCCTGATAC 60.202 52.381 0.00 0.00 37.91 2.24
454 455 0.823460 TCTCGCACATGCCTGATACA 59.177 50.000 0.00 0.00 37.91 2.29
455 456 1.413812 TCTCGCACATGCCTGATACAT 59.586 47.619 0.00 0.00 37.91 2.29
457 458 1.138661 TCGCACATGCCTGATACATGA 59.861 47.619 10.49 0.00 46.33 3.07
458 459 1.941975 CGCACATGCCTGATACATGAA 59.058 47.619 10.49 0.00 46.33 2.57
459 460 2.551032 CGCACATGCCTGATACATGAAT 59.449 45.455 10.49 0.00 46.33 2.57
460 461 3.747529 CGCACATGCCTGATACATGAATA 59.252 43.478 10.49 0.00 46.33 1.75
461 462 4.377738 CGCACATGCCTGATACATGAATAC 60.378 45.833 10.49 0.00 46.33 1.89
462 463 4.083110 GCACATGCCTGATACATGAATACC 60.083 45.833 10.49 0.00 46.33 2.73
463 464 5.311265 CACATGCCTGATACATGAATACCT 58.689 41.667 10.49 0.00 46.33 3.08
464 465 5.766670 CACATGCCTGATACATGAATACCTT 59.233 40.000 10.49 0.00 46.33 3.50
465 466 6.263842 CACATGCCTGATACATGAATACCTTT 59.736 38.462 10.49 0.00 46.33 3.11
466 467 6.263842 ACATGCCTGATACATGAATACCTTTG 59.736 38.462 10.49 0.00 46.33 2.77
467 468 5.754782 TGCCTGATACATGAATACCTTTGT 58.245 37.500 0.00 0.00 0.00 2.83
468 469 5.822519 TGCCTGATACATGAATACCTTTGTC 59.177 40.000 0.00 0.00 0.00 3.18
469 470 6.058183 GCCTGATACATGAATACCTTTGTCT 58.942 40.000 0.00 0.00 0.00 3.41
470 471 6.203723 GCCTGATACATGAATACCTTTGTCTC 59.796 42.308 0.00 0.00 0.00 3.36
471 472 7.275183 CCTGATACATGAATACCTTTGTCTCA 58.725 38.462 0.00 0.00 0.00 3.27
472 473 7.935755 CCTGATACATGAATACCTTTGTCTCAT 59.064 37.037 0.00 0.00 30.93 2.90
473 474 8.893219 TGATACATGAATACCTTTGTCTCATC 57.107 34.615 0.00 0.00 29.27 2.92
474 475 7.933577 TGATACATGAATACCTTTGTCTCATCC 59.066 37.037 0.00 0.00 29.27 3.51
475 476 6.065976 ACATGAATACCTTTGTCTCATCCA 57.934 37.500 0.00 0.00 29.27 3.41
476 477 6.118170 ACATGAATACCTTTGTCTCATCCAG 58.882 40.000 0.00 0.00 29.27 3.86
477 478 6.070021 ACATGAATACCTTTGTCTCATCCAGA 60.070 38.462 0.00 0.00 29.27 3.86
478 479 6.566079 TGAATACCTTTGTCTCATCCAGAT 57.434 37.500 0.00 0.00 32.08 2.90
479 480 6.586344 TGAATACCTTTGTCTCATCCAGATC 58.414 40.000 0.00 0.00 32.08 2.75
480 481 3.922171 ACCTTTGTCTCATCCAGATCC 57.078 47.619 0.00 0.00 32.08 3.36
481 482 2.169352 ACCTTTGTCTCATCCAGATCCG 59.831 50.000 0.00 0.00 32.08 4.18
482 483 2.484417 CCTTTGTCTCATCCAGATCCGG 60.484 54.545 0.00 0.00 32.08 5.14
483 484 0.465705 TTGTCTCATCCAGATCCGGC 59.534 55.000 0.00 0.00 32.08 6.13
484 485 1.369321 GTCTCATCCAGATCCGGCC 59.631 63.158 0.00 0.00 32.08 6.13
485 486 1.075301 TCTCATCCAGATCCGGCCA 60.075 57.895 2.24 0.00 0.00 5.36
486 487 0.690744 TCTCATCCAGATCCGGCCAA 60.691 55.000 2.24 0.00 0.00 4.52
487 488 0.533755 CTCATCCAGATCCGGCCAAC 60.534 60.000 2.24 0.00 0.00 3.77
488 489 1.526917 CATCCAGATCCGGCCAACC 60.527 63.158 2.24 0.00 0.00 3.77
489 490 2.000701 ATCCAGATCCGGCCAACCA 61.001 57.895 2.24 0.00 34.57 3.67
507 508 5.393027 CCAACCATCATAGTTAGCCAACAAC 60.393 44.000 0.00 0.00 37.10 3.32
508 509 4.917385 ACCATCATAGTTAGCCAACAACA 58.083 39.130 0.00 0.00 37.10 3.33
509 510 4.700213 ACCATCATAGTTAGCCAACAACAC 59.300 41.667 0.00 0.00 37.10 3.32
511 512 3.331150 TCATAGTTAGCCAACAACACCG 58.669 45.455 0.00 0.00 37.10 4.94
513 514 0.181824 AGTTAGCCAACAACACCGGT 59.818 50.000 0.00 0.00 37.10 5.28
514 515 1.417145 AGTTAGCCAACAACACCGGTA 59.583 47.619 6.87 0.00 37.10 4.02
515 516 1.802365 GTTAGCCAACAACACCGGTAG 59.198 52.381 6.87 4.38 34.60 3.18
516 517 0.320946 TAGCCAACAACACCGGTAGC 60.321 55.000 6.87 1.64 0.00 3.58
517 518 2.622962 GCCAACAACACCGGTAGCC 61.623 63.158 6.87 0.00 0.00 3.93
552 555 2.528743 CCATCTCGCATCACACGCC 61.529 63.158 0.00 0.00 0.00 5.68
553 556 2.202932 ATCTCGCATCACACGCCC 60.203 61.111 0.00 0.00 0.00 6.13
577 580 4.220602 CCAGCCTACCAAGCAATTTAGTTT 59.779 41.667 0.00 0.00 0.00 2.66
582 585 4.237349 ACCAAGCAATTTAGTTTCACCG 57.763 40.909 0.00 0.00 0.00 4.94
587 590 5.358298 AGCAATTTAGTTTCACCGAGAAC 57.642 39.130 0.00 0.00 35.56 3.01
656 659 3.439825 TGTTTGCATGCTTGATCGTACAT 59.560 39.130 20.33 0.00 0.00 2.29
657 660 3.678915 TTGCATGCTTGATCGTACATG 57.321 42.857 20.33 14.15 42.20 3.21
664 667 5.029807 TGCTTGATCGTACATGGGAATAA 57.970 39.130 0.00 0.00 0.00 1.40
671 674 6.317642 TGATCGTACATGGGAATAAACAAAGG 59.682 38.462 0.00 0.00 0.00 3.11
695 698 8.485613 GGATTCTCTCCATGTTGTTGGAAACG 62.486 46.154 0.00 0.00 46.91 3.60
840 851 1.278127 GAGGCCTGCTTACCACTAACA 59.722 52.381 12.00 0.00 0.00 2.41
864 875 4.593956 CCCATCTTCACTAAAGGCTCTTT 58.406 43.478 5.65 5.65 35.54 2.52
873 884 2.640316 AAAGGCTCTTTATAGGCGGG 57.360 50.000 0.00 0.00 46.19 6.13
906 917 2.556287 CAGCCCAGAAACGCGAAC 59.444 61.111 15.93 3.14 0.00 3.95
913 924 1.397567 CCAGAAACGCGAACGGTAAAC 60.398 52.381 15.93 0.00 39.25 2.01
928 939 0.468958 TAAACTGGCCCAGCAAAGCA 60.469 50.000 11.63 0.00 34.37 3.91
981 1001 0.837691 ACCTGTCATCAGCCACCTCA 60.838 55.000 0.00 0.00 40.09 3.86
982 1002 0.392193 CCTGTCATCAGCCACCTCAC 60.392 60.000 0.00 0.00 40.09 3.51
983 1003 0.392193 CTGTCATCAGCCACCTCACC 60.392 60.000 0.00 0.00 34.79 4.02
984 1004 1.078143 GTCATCAGCCACCTCACCC 60.078 63.158 0.00 0.00 0.00 4.61
985 1005 2.124983 CATCAGCCACCTCACCCG 60.125 66.667 0.00 0.00 0.00 5.28
986 1006 2.284625 ATCAGCCACCTCACCCGA 60.285 61.111 0.00 0.00 0.00 5.14
1019 1039 2.181525 CCAAATTTGGGCTCCGCG 59.818 61.111 26.87 0.00 44.70 6.46
1131 1151 4.787280 CCCTCTCGCCCACCCTCT 62.787 72.222 0.00 0.00 0.00 3.69
1255 1275 4.514577 CGCAGGATCCTTCGGCGT 62.515 66.667 28.03 0.00 39.80 5.68
1257 1277 2.278857 CAGGATCCTTCGGCGTCG 60.279 66.667 13.00 1.15 37.82 5.12
1290 1310 2.354259 GAGGTGGATGTGAGCAGAAAG 58.646 52.381 0.00 0.00 0.00 2.62
1404 1424 4.357947 GTCGACGCTCTGGTGGCA 62.358 66.667 0.00 0.00 0.00 4.92
1409 1429 3.385384 CGCTCTGGTGGCAGAGGA 61.385 66.667 2.39 0.00 46.49 3.71
1410 1430 2.947532 CGCTCTGGTGGCAGAGGAA 61.948 63.158 2.39 0.00 46.49 3.36
1430 1450 3.454574 CGATGAAAACGCGGACGA 58.545 55.556 12.47 0.00 43.93 4.20
1449 1508 3.670377 GACGGGTTTGCCAGTGCC 61.670 66.667 0.00 0.00 43.18 5.01
1490 1552 1.002544 CCCCTTCTCCTGTCACTGTTC 59.997 57.143 0.00 0.00 0.00 3.18
1499 1561 2.292267 CTGTCACTGTTCCTTGCTTGT 58.708 47.619 0.00 0.00 0.00 3.16
1551 1613 1.421485 CGCTGACACCTTGAATCGC 59.579 57.895 0.00 0.00 0.00 4.58
1552 1614 1.796796 GCTGACACCTTGAATCGCC 59.203 57.895 0.00 0.00 0.00 5.54
1553 1615 1.648467 GCTGACACCTTGAATCGCCC 61.648 60.000 0.00 0.00 0.00 6.13
1554 1616 0.036010 CTGACACCTTGAATCGCCCT 60.036 55.000 0.00 0.00 0.00 5.19
1555 1617 1.207089 CTGACACCTTGAATCGCCCTA 59.793 52.381 0.00 0.00 0.00 3.53
1556 1618 1.837439 TGACACCTTGAATCGCCCTAT 59.163 47.619 0.00 0.00 0.00 2.57
1557 1619 2.238646 TGACACCTTGAATCGCCCTATT 59.761 45.455 0.00 0.00 0.00 1.73
1558 1620 2.872858 GACACCTTGAATCGCCCTATTC 59.127 50.000 0.00 0.00 36.57 1.75
1559 1621 2.222027 CACCTTGAATCGCCCTATTCC 58.778 52.381 0.00 0.00 35.40 3.01
1560 1622 2.127708 ACCTTGAATCGCCCTATTCCT 58.872 47.619 0.00 0.00 35.40 3.36
1561 1623 2.509964 ACCTTGAATCGCCCTATTCCTT 59.490 45.455 0.00 0.00 35.40 3.36
1562 1624 2.880890 CCTTGAATCGCCCTATTCCTTG 59.119 50.000 0.00 0.00 35.40 3.61
1563 1625 1.967319 TGAATCGCCCTATTCCTTGC 58.033 50.000 0.00 0.00 35.40 4.01
1564 1626 1.211703 TGAATCGCCCTATTCCTTGCA 59.788 47.619 0.00 0.00 35.40 4.08
1565 1627 1.876156 GAATCGCCCTATTCCTTGCAG 59.124 52.381 0.00 0.00 30.96 4.41
1566 1628 1.131638 ATCGCCCTATTCCTTGCAGA 58.868 50.000 0.00 0.00 0.00 4.26
1567 1629 0.178068 TCGCCCTATTCCTTGCAGAC 59.822 55.000 0.00 0.00 0.00 3.51
1568 1630 0.107703 CGCCCTATTCCTTGCAGACA 60.108 55.000 0.00 0.00 0.00 3.41
1569 1631 1.383523 GCCCTATTCCTTGCAGACAC 58.616 55.000 0.00 0.00 0.00 3.67
1570 1632 1.065126 GCCCTATTCCTTGCAGACACT 60.065 52.381 0.00 0.00 0.00 3.55
1571 1633 2.170607 GCCCTATTCCTTGCAGACACTA 59.829 50.000 0.00 0.00 0.00 2.74
1572 1634 3.798202 CCCTATTCCTTGCAGACACTAC 58.202 50.000 0.00 0.00 0.00 2.73
1573 1635 3.452627 CCCTATTCCTTGCAGACACTACT 59.547 47.826 0.00 0.00 0.00 2.57
1574 1636 4.649674 CCCTATTCCTTGCAGACACTACTA 59.350 45.833 0.00 0.00 0.00 1.82
1575 1637 5.305644 CCCTATTCCTTGCAGACACTACTAT 59.694 44.000 0.00 0.00 0.00 2.12
1576 1638 6.219473 CCTATTCCTTGCAGACACTACTATG 58.781 44.000 0.00 0.00 0.00 2.23
1577 1639 4.471904 TTCCTTGCAGACACTACTATGG 57.528 45.455 0.00 0.00 0.00 2.74
1578 1640 2.168521 TCCTTGCAGACACTACTATGGC 59.831 50.000 0.00 0.00 0.00 4.40
1579 1641 2.196749 CTTGCAGACACTACTATGGCG 58.803 52.381 0.00 0.00 30.43 5.69
1580 1642 0.459899 TGCAGACACTACTATGGCGG 59.540 55.000 0.00 0.00 30.43 6.13
1581 1643 0.460311 GCAGACACTACTATGGCGGT 59.540 55.000 0.00 0.00 30.43 5.68
1582 1644 1.536284 GCAGACACTACTATGGCGGTC 60.536 57.143 0.00 0.00 30.43 4.79
1583 1645 1.749063 CAGACACTACTATGGCGGTCA 59.251 52.381 0.00 0.00 30.43 4.02
1584 1646 2.025155 AGACACTACTATGGCGGTCAG 58.975 52.381 0.00 0.00 30.43 3.51
1585 1647 1.067212 GACACTACTATGGCGGTCAGG 59.933 57.143 0.00 0.00 0.00 3.86
1586 1648 1.341679 ACACTACTATGGCGGTCAGGA 60.342 52.381 0.00 0.00 0.00 3.86
1587 1649 1.754803 CACTACTATGGCGGTCAGGAA 59.245 52.381 0.00 0.00 0.00 3.36
1588 1650 2.032620 ACTACTATGGCGGTCAGGAAG 58.967 52.381 0.00 0.00 0.00 3.46
1589 1651 1.341531 CTACTATGGCGGTCAGGAAGG 59.658 57.143 0.00 0.00 0.00 3.46
1590 1652 0.325296 ACTATGGCGGTCAGGAAGGA 60.325 55.000 0.00 0.00 0.00 3.36
1591 1653 0.105039 CTATGGCGGTCAGGAAGGAC 59.895 60.000 0.00 0.00 37.06 3.85
1592 1654 1.672854 TATGGCGGTCAGGAAGGACG 61.673 60.000 0.00 0.00 38.70 4.79
1593 1655 3.379445 GGCGGTCAGGAAGGACGA 61.379 66.667 0.00 0.00 38.70 4.20
1594 1656 2.722201 GGCGGTCAGGAAGGACGAT 61.722 63.158 0.00 0.00 38.70 3.73
1595 1657 1.227002 GCGGTCAGGAAGGACGATC 60.227 63.158 0.00 0.00 38.70 3.69
1596 1658 1.437986 CGGTCAGGAAGGACGATCC 59.562 63.158 0.00 0.00 38.70 3.36
1605 1667 2.584673 AGGACGATCCTCCACACTG 58.415 57.895 12.58 0.00 45.66 3.66
1606 1668 1.153549 GGACGATCCTCCACACTGC 60.154 63.158 5.92 0.00 32.53 4.40
1607 1669 1.608717 GGACGATCCTCCACACTGCT 61.609 60.000 5.92 0.00 32.53 4.24
1608 1670 0.179124 GACGATCCTCCACACTGCTC 60.179 60.000 0.00 0.00 0.00 4.26
1609 1671 1.142748 CGATCCTCCACACTGCTCC 59.857 63.158 0.00 0.00 0.00 4.70
1610 1672 1.142748 GATCCTCCACACTGCTCCG 59.857 63.158 0.00 0.00 0.00 4.63
1611 1673 2.303549 GATCCTCCACACTGCTCCGG 62.304 65.000 0.00 0.00 0.00 5.14
1612 1674 4.767255 CCTCCACACTGCTCCGGC 62.767 72.222 0.00 0.00 39.26 6.13
1636 1698 1.270907 CCCTACTCCTTGCAGACACT 58.729 55.000 0.00 0.00 0.00 3.55
1656 1718 0.832135 ACTCTGGCGGTCAGGAAGAA 60.832 55.000 10.12 0.00 43.53 2.52
1657 1719 0.390472 CTCTGGCGGTCAGGAAGAAC 60.390 60.000 10.12 0.00 43.53 3.01
1664 1726 2.588027 GGTCAGGAAGAACGATCCTC 57.412 55.000 0.00 0.00 45.59 3.71
1665 1727 1.137282 GGTCAGGAAGAACGATCCTCC 59.863 57.143 2.17 2.17 45.59 4.30
1666 1728 1.825474 GTCAGGAAGAACGATCCTCCA 59.175 52.381 12.37 0.00 45.59 3.86
1667 1729 1.825474 TCAGGAAGAACGATCCTCCAC 59.175 52.381 12.37 0.00 45.59 4.02
1668 1730 1.550524 CAGGAAGAACGATCCTCCACA 59.449 52.381 12.37 0.00 45.59 4.17
1669 1731 1.550976 AGGAAGAACGATCCTCCACAC 59.449 52.381 12.37 0.00 44.01 3.82
1670 1732 1.550976 GGAAGAACGATCCTCCACACT 59.449 52.381 5.50 0.00 36.36 3.55
1671 1733 2.611518 GAAGAACGATCCTCCACACTG 58.388 52.381 0.00 0.00 0.00 3.66
1672 1734 0.247736 AGAACGATCCTCCACACTGC 59.752 55.000 0.00 0.00 0.00 4.40
1673 1735 0.247736 GAACGATCCTCCACACTGCT 59.752 55.000 0.00 0.00 0.00 4.24
1674 1736 0.247736 AACGATCCTCCACACTGCTC 59.752 55.000 0.00 0.00 0.00 4.26
1675 1737 1.142748 CGATCCTCCACACTGCTCC 59.857 63.158 0.00 0.00 0.00 4.70
1676 1738 1.142748 GATCCTCCACACTGCTCCG 59.857 63.158 0.00 0.00 0.00 4.63
1677 1739 2.303549 GATCCTCCACACTGCTCCGG 62.304 65.000 0.00 0.00 0.00 5.14
1678 1740 4.767255 CCTCCACACTGCTCCGGC 62.767 72.222 0.00 0.00 39.26 6.13
1693 1755 3.459063 GGCGACGCCCTACTCCTT 61.459 66.667 28.74 0.00 44.06 3.36
1694 1756 2.202756 GCGACGCCCTACTCCTTG 60.203 66.667 9.14 0.00 0.00 3.61
1695 1757 2.202756 CGACGCCCTACTCCTTGC 60.203 66.667 0.00 0.00 0.00 4.01
1696 1758 2.978824 GACGCCCTACTCCTTGCA 59.021 61.111 0.00 0.00 0.00 4.08
1697 1759 1.153549 GACGCCCTACTCCTTGCAG 60.154 63.158 0.00 0.00 0.00 4.41
1698 1760 1.605058 GACGCCCTACTCCTTGCAGA 61.605 60.000 0.00 0.00 0.00 4.26
1699 1761 1.153549 CGCCCTACTCCTTGCAGAC 60.154 63.158 0.00 0.00 0.00 3.51
1700 1762 1.888436 CGCCCTACTCCTTGCAGACA 61.888 60.000 0.00 0.00 0.00 3.41
1701 1763 0.391793 GCCCTACTCCTTGCAGACAC 60.392 60.000 0.00 0.00 0.00 3.67
1702 1764 1.270907 CCCTACTCCTTGCAGACACT 58.729 55.000 0.00 0.00 0.00 3.55
1703 1765 2.457598 CCCTACTCCTTGCAGACACTA 58.542 52.381 0.00 0.00 0.00 2.74
1704 1766 2.166664 CCCTACTCCTTGCAGACACTAC 59.833 54.545 0.00 0.00 0.00 2.73
1705 1767 3.093057 CCTACTCCTTGCAGACACTACT 58.907 50.000 0.00 0.00 0.00 2.57
1706 1768 3.129638 CCTACTCCTTGCAGACACTACTC 59.870 52.174 0.00 0.00 0.00 2.59
1707 1769 2.883026 ACTCCTTGCAGACACTACTCT 58.117 47.619 0.00 0.00 0.00 3.24
1708 1770 2.560542 ACTCCTTGCAGACACTACTCTG 59.439 50.000 0.00 0.00 40.73 3.35
1709 1771 1.895798 TCCTTGCAGACACTACTCTGG 59.104 52.381 0.00 0.00 38.54 3.86
1710 1772 1.674221 CCTTGCAGACACTACTCTGGC 60.674 57.143 0.00 0.00 38.54 4.85
1711 1773 0.038251 TTGCAGACACTACTCTGGCG 60.038 55.000 0.00 0.00 38.54 5.69
1712 1774 1.153745 GCAGACACTACTCTGGCGG 60.154 63.158 0.00 0.00 38.54 6.13
1713 1775 1.878656 GCAGACACTACTCTGGCGGT 61.879 60.000 0.00 0.00 38.54 5.68
1714 1776 0.171455 CAGACACTACTCTGGCGGTC 59.829 60.000 0.00 0.00 35.00 4.79
1715 1777 0.251209 AGACACTACTCTGGCGGTCA 60.251 55.000 0.00 0.00 0.00 4.02
1716 1778 0.171455 GACACTACTCTGGCGGTCAG 59.829 60.000 2.46 2.46 44.68 3.51
1717 1779 1.251527 ACACTACTCTGGCGGTCAGG 61.252 60.000 10.12 3.22 43.53 3.86
1718 1780 0.965866 CACTACTCTGGCGGTCAGGA 60.966 60.000 10.12 0.00 43.53 3.86
1719 1781 0.251653 ACTACTCTGGCGGTCAGGAA 60.252 55.000 10.12 0.00 43.53 3.36
1720 1782 0.457851 CTACTCTGGCGGTCAGGAAG 59.542 60.000 10.12 3.21 43.53 3.46
1721 1783 0.039180 TACTCTGGCGGTCAGGAAGA 59.961 55.000 10.12 0.00 43.53 2.87
1765 1827 2.648059 GAGGTAGGCATCACAGCAAAT 58.352 47.619 0.00 0.00 35.83 2.32
1799 1861 2.584835 TGCACCAATGGCTTACTCTT 57.415 45.000 0.00 0.00 0.00 2.85
1825 1887 0.529773 TGAATCCCGCTGATACGCAC 60.530 55.000 0.00 0.00 31.83 5.34
1861 1923 1.282157 GTAAGGATGGGTGGCTGAAGT 59.718 52.381 0.00 0.00 0.00 3.01
1922 1984 1.789464 CGTCTGTCACAGCAAGAGAAC 59.211 52.381 0.00 0.00 0.00 3.01
1960 2022 0.391661 TCATCCTCCTGCTGCGAAAC 60.392 55.000 0.00 0.00 0.00 2.78
1967 2029 3.551496 CTGCTGCGAAACCTCCCCA 62.551 63.158 0.00 0.00 0.00 4.96
1988 2050 3.555324 TCCCGGTGCTGCTTCACA 61.555 61.111 0.00 0.00 38.66 3.58
1990 2052 1.973281 CCCGGTGCTGCTTCACAAT 60.973 57.895 0.00 0.00 38.66 2.71
2021 2086 1.133199 AGAGCCCTATCTCTGACCAGG 60.133 57.143 0.00 0.00 41.57 4.45
2024 2089 1.047002 CCCTATCTCTGACCAGGCAG 58.953 60.000 0.00 0.00 37.24 4.85
2028 2093 1.196766 ATCTCTGACCAGGCAGTGCA 61.197 55.000 18.61 0.00 37.20 4.57
2031 2096 1.303074 CTGACCAGGCAGTGCATGT 60.303 57.895 26.42 15.44 38.76 3.21
2034 2099 1.859427 GACCAGGCAGTGCATGTGTG 61.859 60.000 26.42 14.84 38.76 3.82
2054 2119 4.274705 TGTGCTTCACGTTTTATGTGTCAT 59.725 37.500 0.00 0.00 37.14 3.06
2086 2151 2.503356 GTGGATGATTCAGTCACCTCCT 59.497 50.000 9.66 0.00 40.28 3.69
2123 2188 6.903479 CGGCGTTAATTTTCTGTACTTAATCC 59.097 38.462 0.00 0.00 0.00 3.01
2170 2235 2.677836 GCATATGAGCAACTGGTTTCGA 59.322 45.455 6.97 0.00 0.00 3.71
2297 2363 4.769488 AGCCTTCTCTTCTGGGAATTTTTC 59.231 41.667 0.00 0.00 0.00 2.29
2308 2374 6.364701 TCTGGGAATTTTTCTCTGTTCTTGA 58.635 36.000 0.00 0.00 31.70 3.02
2369 2435 4.521146 AGACCATTTCCAGTTATCTGCAG 58.479 43.478 7.63 7.63 40.09 4.41
2374 2440 4.623932 TTTCCAGTTATCTGCAGTGTCT 57.376 40.909 14.67 5.70 40.09 3.41
2375 2441 3.599730 TCCAGTTATCTGCAGTGTCTG 57.400 47.619 14.67 16.28 40.09 3.51
2376 2442 3.165071 TCCAGTTATCTGCAGTGTCTGA 58.835 45.455 14.67 0.56 40.09 3.27
2378 2444 4.956075 TCCAGTTATCTGCAGTGTCTGATA 59.044 41.667 14.67 0.00 40.09 2.15
2381 2447 7.287696 TCCAGTTATCTGCAGTGTCTGATATTA 59.712 37.037 14.67 0.00 40.09 0.98
2382 2448 8.093307 CCAGTTATCTGCAGTGTCTGATATTAT 58.907 37.037 14.67 0.00 40.09 1.28
2508 2628 5.807520 CAGTCGTGTATTAAGATGAACAGCT 59.192 40.000 0.00 0.00 0.00 4.24
2509 2629 6.972901 CAGTCGTGTATTAAGATGAACAGCTA 59.027 38.462 0.00 0.00 0.00 3.32
2510 2630 6.973474 AGTCGTGTATTAAGATGAACAGCTAC 59.027 38.462 0.00 0.00 0.00 3.58
2511 2631 6.973474 GTCGTGTATTAAGATGAACAGCTACT 59.027 38.462 0.00 0.00 0.00 2.57
2512 2632 8.127327 GTCGTGTATTAAGATGAACAGCTACTA 58.873 37.037 0.00 0.00 0.00 1.82
2513 2633 8.127327 TCGTGTATTAAGATGAACAGCTACTAC 58.873 37.037 0.00 0.00 0.00 2.73
2514 2634 7.378995 CGTGTATTAAGATGAACAGCTACTACC 59.621 40.741 0.00 0.00 0.00 3.18
2515 2635 7.652507 GTGTATTAAGATGAACAGCTACTACCC 59.347 40.741 0.00 0.00 0.00 3.69
2516 2636 5.609533 TTAAGATGAACAGCTACTACCCC 57.390 43.478 0.00 0.00 0.00 4.95
2517 2637 3.116096 AGATGAACAGCTACTACCCCA 57.884 47.619 0.00 0.00 0.00 4.96
2518 2638 2.766828 AGATGAACAGCTACTACCCCAC 59.233 50.000 0.00 0.00 0.00 4.61
2519 2639 2.018355 TGAACAGCTACTACCCCACA 57.982 50.000 0.00 0.00 0.00 4.17
2520 2640 2.331166 TGAACAGCTACTACCCCACAA 58.669 47.619 0.00 0.00 0.00 3.33
2521 2641 2.706723 TGAACAGCTACTACCCCACAAA 59.293 45.455 0.00 0.00 0.00 2.83
2522 2642 3.136809 TGAACAGCTACTACCCCACAAAA 59.863 43.478 0.00 0.00 0.00 2.44
2523 2643 3.868619 ACAGCTACTACCCCACAAAAA 57.131 42.857 0.00 0.00 0.00 1.94
2609 2735 7.912250 GGACATAATTAGCTTGTCATTTGACTG 59.088 37.037 15.47 6.19 44.99 3.51
2610 2736 7.253422 ACATAATTAGCTTGTCATTTGACTGC 58.747 34.615 11.67 14.17 44.99 4.40
2638 2764 4.202673 ACTGGGAATTTTCCTTTGGCTCTA 60.203 41.667 9.13 0.00 46.72 2.43
2707 2833 1.525995 CGGCCGGAATGCACCTATT 60.526 57.895 20.10 0.00 0.00 1.73
2764 2890 2.288395 CGCTTTGTGCATTCCCTTCTTT 60.288 45.455 0.00 0.00 43.06 2.52
2867 2993 1.240256 GTTGGTTGTTACATCGGCCA 58.760 50.000 2.24 0.00 0.00 5.36
2871 2997 1.530323 GTTGTTACATCGGCCAAGGT 58.470 50.000 2.24 0.00 0.00 3.50
3041 3168 4.868171 AGAGCGTTGATAAAAGCGTCAATA 59.132 37.500 0.00 0.00 36.79 1.90
3062 3189 7.670140 TCAATAGAAGAGGACACAAGAAGTAGA 59.330 37.037 0.00 0.00 0.00 2.59
3072 3199 7.665559 AGGACACAAGAAGTAGAAATGCAATTA 59.334 33.333 0.00 0.00 33.67 1.40
3094 3223 8.766994 ATTATTTTGTCAGGCATAGTGGTAAT 57.233 30.769 0.00 0.00 0.00 1.89
3099 3228 3.560068 GTCAGGCATAGTGGTAATTTCCG 59.440 47.826 0.00 0.00 0.00 4.30
3100 3229 2.290641 CAGGCATAGTGGTAATTTCCGC 59.709 50.000 6.56 6.56 38.17 5.54
3102 3231 2.884639 GGCATAGTGGTAATTTCCGCAT 59.115 45.455 15.96 5.81 40.11 4.73
3113 3242 4.637483 AATTTCCGCATGATACAGTTGG 57.363 40.909 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.406648 ACAGCAGTATATTAGCAGCACA 57.593 40.909 0.00 0.00 0.00 4.57
1 2 4.572389 ACAACAGCAGTATATTAGCAGCAC 59.428 41.667 0.00 0.00 0.00 4.40
2 3 4.571984 CACAACAGCAGTATATTAGCAGCA 59.428 41.667 0.00 0.00 0.00 4.41
3 4 4.553547 GCACAACAGCAGTATATTAGCAGC 60.554 45.833 0.00 0.00 0.00 5.25
4 5 4.571984 TGCACAACAGCAGTATATTAGCAG 59.428 41.667 0.00 0.00 40.11 4.24
5 6 4.332543 GTGCACAACAGCAGTATATTAGCA 59.667 41.667 13.17 0.00 46.69 3.49
6 7 4.572389 AGTGCACAACAGCAGTATATTAGC 59.428 41.667 21.04 0.00 45.82 3.09
7 8 6.092670 ACAAGTGCACAACAGCAGTATATTAG 59.907 38.462 21.04 0.00 46.90 1.73
8 9 5.937540 ACAAGTGCACAACAGCAGTATATTA 59.062 36.000 21.04 0.00 46.90 0.98
9 10 4.761739 ACAAGTGCACAACAGCAGTATATT 59.238 37.500 21.04 0.00 46.90 1.28
10 11 4.154737 CACAAGTGCACAACAGCAGTATAT 59.845 41.667 21.04 0.00 46.90 0.86
11 12 3.498018 CACAAGTGCACAACAGCAGTATA 59.502 43.478 21.04 0.00 46.90 1.47
12 13 2.291465 CACAAGTGCACAACAGCAGTAT 59.709 45.455 21.04 0.00 46.90 2.12
13 14 1.670295 CACAAGTGCACAACAGCAGTA 59.330 47.619 21.04 0.00 46.90 2.74
15 16 3.245443 CACAAGTGCACAACAGCAG 57.755 52.632 21.04 2.77 46.69 4.24
26 27 6.621596 GCATAAGTAAAAGAGGAGCACAAGTG 60.622 42.308 0.00 0.00 0.00 3.16
27 28 5.412904 GCATAAGTAAAAGAGGAGCACAAGT 59.587 40.000 0.00 0.00 0.00 3.16
28 29 5.163713 GGCATAAGTAAAAGAGGAGCACAAG 60.164 44.000 0.00 0.00 0.00 3.16
29 30 4.700213 GGCATAAGTAAAAGAGGAGCACAA 59.300 41.667 0.00 0.00 0.00 3.33
30 31 4.261801 GGCATAAGTAAAAGAGGAGCACA 58.738 43.478 0.00 0.00 0.00 4.57
31 32 4.261801 TGGCATAAGTAAAAGAGGAGCAC 58.738 43.478 0.00 0.00 0.00 4.40
32 33 4.568072 TGGCATAAGTAAAAGAGGAGCA 57.432 40.909 0.00 0.00 0.00 4.26
33 34 7.751768 ATATTGGCATAAGTAAAAGAGGAGC 57.248 36.000 0.00 0.00 0.00 4.70
44 45 8.567948 GCACAACAATAGTATATTGGCATAAGT 58.432 33.333 12.72 1.73 33.56 2.24
45 46 8.567104 TGCACAACAATAGTATATTGGCATAAG 58.433 33.333 12.72 1.54 33.56 1.73
46 47 8.349245 GTGCACAACAATAGTATATTGGCATAA 58.651 33.333 13.17 0.00 33.72 1.90
47 48 7.719193 AGTGCACAACAATAGTATATTGGCATA 59.281 33.333 21.04 0.00 33.72 3.14
48 49 6.547141 AGTGCACAACAATAGTATATTGGCAT 59.453 34.615 21.04 0.00 33.72 4.40
49 50 5.885352 AGTGCACAACAATAGTATATTGGCA 59.115 36.000 21.04 9.61 33.56 4.92
50 51 6.377327 AGTGCACAACAATAGTATATTGGC 57.623 37.500 21.04 7.62 33.56 4.52
51 52 7.697710 CACAAGTGCACAACAATAGTATATTGG 59.302 37.037 21.04 1.06 33.56 3.16
52 53 8.605354 CACAAGTGCACAACAATAGTATATTG 57.395 34.615 21.04 11.86 35.29 1.90
70 71 5.741388 ACAGTAAAAGAGAAGCACAAGTG 57.259 39.130 0.00 0.00 0.00 3.16
71 72 5.648092 ACAACAGTAAAAGAGAAGCACAAGT 59.352 36.000 0.00 0.00 0.00 3.16
72 73 6.124088 ACAACAGTAAAAGAGAAGCACAAG 57.876 37.500 0.00 0.00 0.00 3.16
73 74 6.509418 AACAACAGTAAAAGAGAAGCACAA 57.491 33.333 0.00 0.00 0.00 3.33
74 75 6.509418 AAACAACAGTAAAAGAGAAGCACA 57.491 33.333 0.00 0.00 0.00 4.57
75 76 6.806739 ACAAAACAACAGTAAAAGAGAAGCAC 59.193 34.615 0.00 0.00 0.00 4.40
76 77 6.919721 ACAAAACAACAGTAAAAGAGAAGCA 58.080 32.000 0.00 0.00 0.00 3.91
77 78 7.328493 ACAACAAAACAACAGTAAAAGAGAAGC 59.672 33.333 0.00 0.00 0.00 3.86
78 79 8.742554 ACAACAAAACAACAGTAAAAGAGAAG 57.257 30.769 0.00 0.00 0.00 2.85
79 80 8.973378 CAACAACAAAACAACAGTAAAAGAGAA 58.027 29.630 0.00 0.00 0.00 2.87
80 81 8.138712 ACAACAACAAAACAACAGTAAAAGAGA 58.861 29.630 0.00 0.00 0.00 3.10
81 82 8.293114 ACAACAACAAAACAACAGTAAAAGAG 57.707 30.769 0.00 0.00 0.00 2.85
82 83 8.543774 CAACAACAACAAAACAACAGTAAAAGA 58.456 29.630 0.00 0.00 0.00 2.52
83 84 7.796197 CCAACAACAACAAAACAACAGTAAAAG 59.204 33.333 0.00 0.00 0.00 2.27
84 85 7.280205 ACCAACAACAACAAAACAACAGTAAAA 59.720 29.630 0.00 0.00 0.00 1.52
85 86 6.761714 ACCAACAACAACAAAACAACAGTAAA 59.238 30.769 0.00 0.00 0.00 2.01
86 87 6.281405 ACCAACAACAACAAAACAACAGTAA 58.719 32.000 0.00 0.00 0.00 2.24
87 88 5.844004 ACCAACAACAACAAAACAACAGTA 58.156 33.333 0.00 0.00 0.00 2.74
88 89 4.698575 ACCAACAACAACAAAACAACAGT 58.301 34.783 0.00 0.00 0.00 3.55
89 90 6.035542 GGATACCAACAACAACAAAACAACAG 59.964 38.462 0.00 0.00 0.00 3.16
90 91 5.869888 GGATACCAACAACAACAAAACAACA 59.130 36.000 0.00 0.00 0.00 3.33
91 92 5.869888 TGGATACCAACAACAACAAAACAAC 59.130 36.000 0.00 0.00 0.00 3.32
92 93 6.037786 TGGATACCAACAACAACAAAACAA 57.962 33.333 0.00 0.00 0.00 2.83
93 94 5.661056 TGGATACCAACAACAACAAAACA 57.339 34.783 0.00 0.00 0.00 2.83
94 95 5.465056 CCATGGATACCAACAACAACAAAAC 59.535 40.000 5.56 0.00 36.95 2.43
95 96 5.363868 TCCATGGATACCAACAACAACAAAA 59.636 36.000 11.44 0.00 36.95 2.44
96 97 4.895889 TCCATGGATACCAACAACAACAAA 59.104 37.500 11.44 0.00 36.95 2.83
97 98 4.474394 TCCATGGATACCAACAACAACAA 58.526 39.130 11.44 0.00 36.95 2.83
98 99 4.078537 CTCCATGGATACCAACAACAACA 58.921 43.478 16.63 0.00 36.95 3.33
99 100 4.331968 TCTCCATGGATACCAACAACAAC 58.668 43.478 16.63 0.00 36.95 3.32
100 101 4.649267 TCTCCATGGATACCAACAACAA 57.351 40.909 16.63 0.00 36.95 2.83
101 102 4.385199 GGATCTCCATGGATACCAACAACA 60.385 45.833 16.63 0.00 36.95 3.33
102 103 4.137543 GGATCTCCATGGATACCAACAAC 58.862 47.826 16.63 0.00 36.95 3.32
103 104 3.138283 GGGATCTCCATGGATACCAACAA 59.862 47.826 16.63 0.00 44.17 2.83
104 105 2.711009 GGGATCTCCATGGATACCAACA 59.289 50.000 16.63 0.00 44.17 3.33
105 106 2.040412 GGGGATCTCCATGGATACCAAC 59.960 54.545 16.63 11.39 46.02 3.77
106 107 2.348472 GGGGATCTCCATGGATACCAA 58.652 52.381 16.63 0.00 46.02 3.67
107 108 1.225431 TGGGGATCTCCATGGATACCA 59.775 52.381 16.63 15.64 46.02 3.25
108 109 2.044793 TGGGGATCTCCATGGATACC 57.955 55.000 16.63 17.57 44.06 2.73
125 126 3.157680 GGTACCCGATCCCCATGG 58.842 66.667 4.14 4.14 0.00 3.66
399 400 3.480133 GACAGGGATCACCGGGGG 61.480 72.222 2.42 0.00 46.96 5.40
400 401 2.365635 AGACAGGGATCACCGGGG 60.366 66.667 6.32 0.00 46.96 5.73
401 402 2.435693 GGAGACAGGGATCACCGGG 61.436 68.421 6.32 0.00 46.96 5.73
402 403 2.786495 CGGAGACAGGGATCACCGG 61.786 68.421 0.00 0.00 45.68 5.28
403 404 2.808315 CGGAGACAGGGATCACCG 59.192 66.667 0.00 0.00 44.54 4.94
404 405 0.108138 CAACGGAGACAGGGATCACC 60.108 60.000 0.00 0.00 40.67 4.02
405 406 0.741221 GCAACGGAGACAGGGATCAC 60.741 60.000 0.00 0.00 0.00 3.06
406 407 1.596934 GCAACGGAGACAGGGATCA 59.403 57.895 0.00 0.00 0.00 2.92
407 408 1.153349 GGCAACGGAGACAGGGATC 60.153 63.158 0.00 0.00 0.00 3.36
408 409 1.274703 ATGGCAACGGAGACAGGGAT 61.275 55.000 0.00 0.00 42.51 3.85
409 410 1.488705 AATGGCAACGGAGACAGGGA 61.489 55.000 0.00 0.00 42.51 4.20
410 411 0.609131 AAATGGCAACGGAGACAGGG 60.609 55.000 0.00 0.00 42.51 4.45
411 412 1.068333 CAAAATGGCAACGGAGACAGG 60.068 52.381 0.00 0.00 42.51 4.00
412 413 1.879380 TCAAAATGGCAACGGAGACAG 59.121 47.619 0.00 0.00 42.51 3.51
413 414 1.974265 TCAAAATGGCAACGGAGACA 58.026 45.000 0.00 0.00 42.51 3.41
414 415 2.293399 AGTTCAAAATGGCAACGGAGAC 59.707 45.455 0.00 0.00 42.51 3.36
415 416 2.552315 GAGTTCAAAATGGCAACGGAGA 59.448 45.455 0.00 0.00 42.51 3.71
416 417 2.554032 AGAGTTCAAAATGGCAACGGAG 59.446 45.455 0.00 0.00 42.51 4.63
417 418 2.552315 GAGAGTTCAAAATGGCAACGGA 59.448 45.455 0.00 0.00 42.51 4.69
418 419 2.665519 CGAGAGTTCAAAATGGCAACGG 60.666 50.000 0.00 0.00 42.51 4.44
419 420 2.574322 CGAGAGTTCAAAATGGCAACG 58.426 47.619 0.00 0.00 42.51 4.10
420 421 2.287547 TGCGAGAGTTCAAAATGGCAAC 60.288 45.455 0.00 0.00 0.00 4.17
421 422 1.952990 TGCGAGAGTTCAAAATGGCAA 59.047 42.857 0.00 0.00 0.00 4.52
422 423 1.266718 GTGCGAGAGTTCAAAATGGCA 59.733 47.619 0.00 0.00 0.00 4.92
423 424 1.266718 TGTGCGAGAGTTCAAAATGGC 59.733 47.619 0.00 0.00 0.00 4.40
424 425 3.495193 CATGTGCGAGAGTTCAAAATGG 58.505 45.455 0.00 0.00 0.00 3.16
425 426 2.912967 GCATGTGCGAGAGTTCAAAATG 59.087 45.455 0.00 0.00 0.00 2.32
426 427 2.095059 GGCATGTGCGAGAGTTCAAAAT 60.095 45.455 0.00 0.00 43.26 1.82
427 428 1.266718 GGCATGTGCGAGAGTTCAAAA 59.733 47.619 0.00 0.00 43.26 2.44
428 429 0.874390 GGCATGTGCGAGAGTTCAAA 59.126 50.000 0.00 0.00 43.26 2.69
429 430 0.035317 AGGCATGTGCGAGAGTTCAA 59.965 50.000 0.00 0.00 43.26 2.69
430 431 0.671472 CAGGCATGTGCGAGAGTTCA 60.671 55.000 0.00 0.00 43.26 3.18
431 432 0.390340 TCAGGCATGTGCGAGAGTTC 60.390 55.000 0.00 0.00 43.26 3.01
432 433 0.251354 ATCAGGCATGTGCGAGAGTT 59.749 50.000 0.00 0.00 43.26 3.01
433 434 1.114627 TATCAGGCATGTGCGAGAGT 58.885 50.000 0.00 0.00 43.26 3.24
434 435 1.202452 TGTATCAGGCATGTGCGAGAG 60.202 52.381 0.00 0.00 43.26 3.20
435 436 0.823460 TGTATCAGGCATGTGCGAGA 59.177 50.000 0.00 0.00 43.26 4.04
436 437 1.529865 CATGTATCAGGCATGTGCGAG 59.470 52.381 0.00 0.00 43.26 5.03
437 438 1.138661 TCATGTATCAGGCATGTGCGA 59.861 47.619 0.00 0.00 42.94 5.10
438 439 1.585297 TCATGTATCAGGCATGTGCG 58.415 50.000 0.00 0.00 42.94 5.34
439 440 4.083110 GGTATTCATGTATCAGGCATGTGC 60.083 45.833 0.00 0.00 42.94 4.57
440 441 5.311265 AGGTATTCATGTATCAGGCATGTG 58.689 41.667 0.00 0.00 42.94 3.21
441 442 5.573380 AGGTATTCATGTATCAGGCATGT 57.427 39.130 0.00 0.00 42.94 3.21
442 443 6.263842 ACAAAGGTATTCATGTATCAGGCATG 59.736 38.462 0.00 0.00 43.55 4.06
443 444 6.367983 ACAAAGGTATTCATGTATCAGGCAT 58.632 36.000 0.00 0.00 0.00 4.40
444 445 5.754782 ACAAAGGTATTCATGTATCAGGCA 58.245 37.500 0.00 0.00 0.00 4.75
445 446 6.058183 AGACAAAGGTATTCATGTATCAGGC 58.942 40.000 0.00 0.00 0.00 4.85
446 447 7.275183 TGAGACAAAGGTATTCATGTATCAGG 58.725 38.462 0.00 0.00 38.62 3.86
447 448 8.899427 ATGAGACAAAGGTATTCATGTATCAG 57.101 34.615 7.90 0.00 44.29 2.90
448 449 7.933577 GGATGAGACAAAGGTATTCATGTATCA 59.066 37.037 4.79 4.79 44.90 2.15
449 450 7.933577 TGGATGAGACAAAGGTATTCATGTATC 59.066 37.037 0.00 0.00 33.81 2.24
450 451 7.805163 TGGATGAGACAAAGGTATTCATGTAT 58.195 34.615 0.00 0.00 33.81 2.29
451 452 7.125659 TCTGGATGAGACAAAGGTATTCATGTA 59.874 37.037 0.00 0.00 33.81 2.29
452 453 6.065976 TGGATGAGACAAAGGTATTCATGT 57.934 37.500 0.00 0.00 33.81 3.21
453 454 6.351711 TCTGGATGAGACAAAGGTATTCATG 58.648 40.000 0.00 0.00 33.81 3.07
454 455 6.566079 TCTGGATGAGACAAAGGTATTCAT 57.434 37.500 0.00 0.00 35.38 2.57
455 456 6.408548 GGATCTGGATGAGACAAAGGTATTCA 60.409 42.308 0.00 0.00 31.75 2.57
456 457 5.994668 GGATCTGGATGAGACAAAGGTATTC 59.005 44.000 0.00 0.00 31.75 1.75
457 458 5.453903 CGGATCTGGATGAGACAAAGGTATT 60.454 44.000 0.00 0.00 31.75 1.89
458 459 4.039730 CGGATCTGGATGAGACAAAGGTAT 59.960 45.833 0.00 0.00 31.75 2.73
459 460 3.384789 CGGATCTGGATGAGACAAAGGTA 59.615 47.826 0.00 0.00 31.75 3.08
460 461 2.169352 CGGATCTGGATGAGACAAAGGT 59.831 50.000 0.00 0.00 31.75 3.50
461 462 2.484417 CCGGATCTGGATGAGACAAAGG 60.484 54.545 16.28 0.00 31.75 3.11
462 463 2.831333 CCGGATCTGGATGAGACAAAG 58.169 52.381 16.28 0.00 31.75 2.77
463 464 1.134401 GCCGGATCTGGATGAGACAAA 60.134 52.381 25.54 0.00 31.75 2.83
464 465 0.465705 GCCGGATCTGGATGAGACAA 59.534 55.000 25.54 0.00 31.75 3.18
465 466 1.402896 GGCCGGATCTGGATGAGACA 61.403 60.000 25.54 0.00 31.75 3.41
466 467 1.369321 GGCCGGATCTGGATGAGAC 59.631 63.158 25.54 4.88 31.75 3.36
467 468 0.690744 TTGGCCGGATCTGGATGAGA 60.691 55.000 25.54 1.70 34.25 3.27
468 469 0.533755 GTTGGCCGGATCTGGATGAG 60.534 60.000 25.54 0.00 0.00 2.90
469 470 1.526887 GTTGGCCGGATCTGGATGA 59.473 57.895 25.54 5.44 0.00 2.92
470 471 1.526917 GGTTGGCCGGATCTGGATG 60.527 63.158 25.54 0.00 0.00 3.51
471 472 1.355718 ATGGTTGGCCGGATCTGGAT 61.356 55.000 25.54 4.49 37.67 3.41
472 473 1.983119 GATGGTTGGCCGGATCTGGA 61.983 60.000 25.54 0.50 37.67 3.86
473 474 1.526917 GATGGTTGGCCGGATCTGG 60.527 63.158 16.98 16.98 37.67 3.86
474 475 0.179009 ATGATGGTTGGCCGGATCTG 60.179 55.000 5.05 0.00 37.67 2.90
475 476 1.349026 CTATGATGGTTGGCCGGATCT 59.651 52.381 5.05 0.00 37.67 2.75
476 477 1.072331 ACTATGATGGTTGGCCGGATC 59.928 52.381 5.05 0.00 37.67 3.36
477 478 1.140312 ACTATGATGGTTGGCCGGAT 58.860 50.000 5.05 0.00 37.67 4.18
478 479 0.916086 AACTATGATGGTTGGCCGGA 59.084 50.000 5.05 0.00 37.67 5.14
479 480 2.494059 CTAACTATGATGGTTGGCCGG 58.506 52.381 4.31 0.00 37.67 6.13
480 481 1.873591 GCTAACTATGATGGTTGGCCG 59.126 52.381 17.00 0.00 42.55 6.13
482 483 2.930950 TGGCTAACTATGATGGTTGGC 58.069 47.619 19.02 19.02 45.82 4.52
483 484 4.269183 TGTTGGCTAACTATGATGGTTGG 58.731 43.478 14.47 2.47 37.68 3.77
484 485 5.182950 TGTTGTTGGCTAACTATGATGGTTG 59.817 40.000 14.47 0.00 37.68 3.77
485 486 5.183140 GTGTTGTTGGCTAACTATGATGGTT 59.817 40.000 14.47 0.00 37.68 3.67
486 487 4.700213 GTGTTGTTGGCTAACTATGATGGT 59.300 41.667 14.47 0.00 37.68 3.55
487 488 4.096382 GGTGTTGTTGGCTAACTATGATGG 59.904 45.833 14.47 0.00 37.68 3.51
488 489 4.201812 CGGTGTTGTTGGCTAACTATGATG 60.202 45.833 14.47 0.00 37.68 3.07
489 490 3.938963 CGGTGTTGTTGGCTAACTATGAT 59.061 43.478 14.47 0.00 37.68 2.45
511 512 1.144496 TGGTTATTCCGCGGCTACC 59.856 57.895 23.51 22.94 39.52 3.18
513 514 4.840168 GTGGTTATTCCGCGGCTA 57.160 55.556 23.51 11.78 39.52 3.93
552 555 0.324645 AATTGCTTGGTAGGCTGGGG 60.325 55.000 0.00 0.00 0.00 4.96
553 556 1.560505 AAATTGCTTGGTAGGCTGGG 58.439 50.000 0.00 0.00 0.00 4.45
558 561 5.619086 CGGTGAAACTAAATTGCTTGGTAGG 60.619 44.000 0.00 0.00 36.74 3.18
560 563 5.064558 TCGGTGAAACTAAATTGCTTGGTA 58.935 37.500 0.00 0.00 36.74 3.25
561 564 3.886505 TCGGTGAAACTAAATTGCTTGGT 59.113 39.130 0.00 0.00 36.74 3.67
577 580 6.942976 ACCAAAGATAATTAGTTCTCGGTGA 58.057 36.000 8.38 0.00 0.00 4.02
632 635 2.664916 ACGATCAAGCATGCAAACAAC 58.335 42.857 21.98 5.65 0.00 3.32
656 659 6.187682 GGAGAGAATCCTTTGTTTATTCCCA 58.812 40.000 0.00 0.00 45.64 4.37
657 660 6.701145 GGAGAGAATCCTTTGTTTATTCCC 57.299 41.667 0.00 0.00 45.64 3.97
684 687 6.712998 TCTTAGGATTCATTCGTTTCCAACAA 59.287 34.615 0.00 0.00 0.00 2.83
685 688 6.234920 TCTTAGGATTCATTCGTTTCCAACA 58.765 36.000 0.00 0.00 0.00 3.33
812 819 3.265737 TGGTAAGCAGGCCTCTTTGATTA 59.734 43.478 18.63 9.07 0.00 1.75
840 851 1.918957 AGCCTTTAGTGAAGATGGGCT 59.081 47.619 0.00 0.00 42.87 5.19
864 875 1.717032 AGAATCACAGCCCGCCTATA 58.283 50.000 0.00 0.00 0.00 1.31
873 884 0.375106 GCTGCGGTAAGAATCACAGC 59.625 55.000 0.00 0.00 43.09 4.40
906 917 1.175983 TTTGCTGGGCCAGTTTACCG 61.176 55.000 32.80 8.92 33.43 4.02
913 924 2.221906 GATGTGCTTTGCTGGGCCAG 62.222 60.000 29.44 29.44 34.12 4.85
928 939 2.125512 GAAGACGGCTGCGGATGT 60.126 61.111 14.45 0.00 0.00 3.06
955 966 1.219124 CTGATGACAGGTGGGTCCG 59.781 63.158 0.00 0.00 41.99 4.79
981 1001 2.691252 GGAAGGGGGTGATCGGGT 60.691 66.667 0.00 0.00 0.00 5.28
982 1002 3.489513 GGGAAGGGGGTGATCGGG 61.490 72.222 0.00 0.00 0.00 5.14
983 1003 3.489513 GGGGAAGGGGGTGATCGG 61.490 72.222 0.00 0.00 0.00 4.18
984 1004 3.861797 CGGGGAAGGGGGTGATCG 61.862 72.222 0.00 0.00 0.00 3.69
985 1005 4.191015 GCGGGGAAGGGGGTGATC 62.191 72.222 0.00 0.00 0.00 2.92
1274 1294 0.329261 CCCCTTTCTGCTCACATCCA 59.671 55.000 0.00 0.00 0.00 3.41
1347 1367 0.758685 AGATCCGGAAGCTGGGAGAG 60.759 60.000 9.01 0.00 35.40 3.20
1404 1424 1.726853 CGTTTTCATCGGCTTCCTCT 58.273 50.000 0.00 0.00 0.00 3.69
1409 1429 1.669760 TCCGCGTTTTCATCGGCTT 60.670 52.632 4.92 0.00 42.65 4.35
1410 1430 2.047655 TCCGCGTTTTCATCGGCT 60.048 55.556 4.92 0.00 42.65 5.52
1430 1450 2.590575 CACTGGCAAACCCGTCGT 60.591 61.111 0.00 0.00 35.87 4.34
1435 1455 3.365265 CTCGGCACTGGCAAACCC 61.365 66.667 3.16 0.00 43.71 4.11
1436 1456 3.365265 CCTCGGCACTGGCAAACC 61.365 66.667 3.16 0.00 43.71 3.27
1437 1457 2.741486 TACCCTCGGCACTGGCAAAC 62.741 60.000 3.16 0.00 43.71 2.93
1440 1499 1.847798 AATTACCCTCGGCACTGGCA 61.848 55.000 3.16 0.00 43.71 4.92
1490 1552 1.610038 TGTGATGCAGAACAAGCAAGG 59.390 47.619 1.91 0.00 46.27 3.61
1499 1561 5.067544 TGAATGAAACTTGTGTGATGCAGAA 59.932 36.000 0.00 0.00 0.00 3.02
1542 1604 2.291741 GCAAGGAATAGGGCGATTCAAG 59.708 50.000 11.47 3.74 37.53 3.02
1551 1613 3.452627 AGTAGTGTCTGCAAGGAATAGGG 59.547 47.826 0.00 0.00 0.00 3.53
1552 1614 4.744795 AGTAGTGTCTGCAAGGAATAGG 57.255 45.455 0.00 0.00 0.00 2.57
1553 1615 6.219473 CCATAGTAGTGTCTGCAAGGAATAG 58.781 44.000 0.00 0.00 0.00 1.73
1554 1616 5.453339 GCCATAGTAGTGTCTGCAAGGAATA 60.453 44.000 0.00 0.00 0.00 1.75
1555 1617 4.684485 GCCATAGTAGTGTCTGCAAGGAAT 60.684 45.833 0.00 0.00 0.00 3.01
1556 1618 3.369471 GCCATAGTAGTGTCTGCAAGGAA 60.369 47.826 0.00 0.00 0.00 3.36
1557 1619 2.168521 GCCATAGTAGTGTCTGCAAGGA 59.831 50.000 0.00 0.00 0.00 3.36
1558 1620 2.555199 GCCATAGTAGTGTCTGCAAGG 58.445 52.381 0.00 0.00 0.00 3.61
1559 1621 2.196749 CGCCATAGTAGTGTCTGCAAG 58.803 52.381 0.00 0.00 0.00 4.01
1560 1622 1.134818 CCGCCATAGTAGTGTCTGCAA 60.135 52.381 0.00 0.00 0.00 4.08
1561 1623 0.459899 CCGCCATAGTAGTGTCTGCA 59.540 55.000 0.00 0.00 0.00 4.41
1562 1624 0.460311 ACCGCCATAGTAGTGTCTGC 59.540 55.000 0.00 0.00 0.00 4.26
1563 1625 1.749063 TGACCGCCATAGTAGTGTCTG 59.251 52.381 0.00 0.00 0.00 3.51
1564 1626 2.025155 CTGACCGCCATAGTAGTGTCT 58.975 52.381 0.00 0.00 0.00 3.41
1565 1627 1.067212 CCTGACCGCCATAGTAGTGTC 59.933 57.143 0.00 0.00 0.00 3.67
1566 1628 1.112113 CCTGACCGCCATAGTAGTGT 58.888 55.000 0.00 0.00 0.00 3.55
1567 1629 1.399714 TCCTGACCGCCATAGTAGTG 58.600 55.000 0.00 0.00 0.00 2.74
1568 1630 2.032620 CTTCCTGACCGCCATAGTAGT 58.967 52.381 0.00 0.00 0.00 2.73
1569 1631 1.341531 CCTTCCTGACCGCCATAGTAG 59.658 57.143 0.00 0.00 0.00 2.57
1570 1632 1.063492 TCCTTCCTGACCGCCATAGTA 60.063 52.381 0.00 0.00 0.00 1.82
1571 1633 0.325296 TCCTTCCTGACCGCCATAGT 60.325 55.000 0.00 0.00 0.00 2.12
1572 1634 0.105039 GTCCTTCCTGACCGCCATAG 59.895 60.000 0.00 0.00 0.00 2.23
1573 1635 1.672854 CGTCCTTCCTGACCGCCATA 61.673 60.000 0.00 0.00 31.35 2.74
1574 1636 2.990479 GTCCTTCCTGACCGCCAT 59.010 61.111 0.00 0.00 0.00 4.40
1575 1637 3.691342 CGTCCTTCCTGACCGCCA 61.691 66.667 0.00 0.00 31.35 5.69
1576 1638 2.630592 GATCGTCCTTCCTGACCGCC 62.631 65.000 0.00 0.00 31.35 6.13
1577 1639 1.227002 GATCGTCCTTCCTGACCGC 60.227 63.158 0.00 0.00 31.35 5.68
1578 1640 1.038130 AGGATCGTCCTTCCTGACCG 61.038 60.000 1.23 0.00 46.91 4.79
1579 1641 2.903404 AGGATCGTCCTTCCTGACC 58.097 57.895 1.23 0.00 46.91 4.02
1588 1650 1.153549 GCAGTGTGGAGGATCGTCC 60.154 63.158 24.60 24.60 36.58 4.79
1589 1651 0.179124 GAGCAGTGTGGAGGATCGTC 60.179 60.000 6.88 6.88 34.37 4.20
1590 1652 1.608717 GGAGCAGTGTGGAGGATCGT 61.609 60.000 0.00 0.00 34.37 3.73
1591 1653 1.142748 GGAGCAGTGTGGAGGATCG 59.857 63.158 0.00 0.00 34.37 3.69
1592 1654 1.142748 CGGAGCAGTGTGGAGGATC 59.857 63.158 0.00 0.00 0.00 3.36
1593 1655 2.362369 CCGGAGCAGTGTGGAGGAT 61.362 63.158 0.00 0.00 0.00 3.24
1594 1656 2.997315 CCGGAGCAGTGTGGAGGA 60.997 66.667 0.00 0.00 0.00 3.71
1595 1657 4.767255 GCCGGAGCAGTGTGGAGG 62.767 72.222 5.05 0.00 39.53 4.30
1611 1673 2.202756 CAAGGAGTAGGGCGTCGC 60.203 66.667 9.22 9.22 0.00 5.19
1612 1674 2.202756 GCAAGGAGTAGGGCGTCG 60.203 66.667 0.00 0.00 0.00 5.12
1613 1675 1.153549 CTGCAAGGAGTAGGGCGTC 60.154 63.158 0.00 0.00 0.00 5.19
1614 1676 1.609501 TCTGCAAGGAGTAGGGCGT 60.610 57.895 0.00 0.00 0.00 5.68
1615 1677 1.153549 GTCTGCAAGGAGTAGGGCG 60.154 63.158 0.00 0.00 0.00 6.13
1616 1678 0.391793 GTGTCTGCAAGGAGTAGGGC 60.392 60.000 0.00 0.00 0.00 5.19
1619 1681 4.013728 AGAGTAGTGTCTGCAAGGAGTAG 58.986 47.826 0.00 0.00 0.00 2.57
1622 1684 2.094286 CCAGAGTAGTGTCTGCAAGGAG 60.094 54.545 0.00 0.00 42.40 3.69
1636 1698 0.039180 TCTTCCTGACCGCCAGAGTA 59.961 55.000 4.84 0.00 45.78 2.59
1656 1718 1.608717 GGAGCAGTGTGGAGGATCGT 61.609 60.000 0.00 0.00 34.37 3.73
1657 1719 1.142748 GGAGCAGTGTGGAGGATCG 59.857 63.158 0.00 0.00 34.37 3.69
1658 1720 1.142748 CGGAGCAGTGTGGAGGATC 59.857 63.158 0.00 0.00 0.00 3.36
1659 1721 2.362369 CCGGAGCAGTGTGGAGGAT 61.362 63.158 0.00 0.00 0.00 3.24
1660 1722 2.997315 CCGGAGCAGTGTGGAGGA 60.997 66.667 0.00 0.00 0.00 3.71
1661 1723 4.767255 GCCGGAGCAGTGTGGAGG 62.767 72.222 5.05 0.00 39.53 4.30
1677 1739 2.202756 CAAGGAGTAGGGCGTCGC 60.203 66.667 9.22 9.22 0.00 5.19
1678 1740 2.202756 GCAAGGAGTAGGGCGTCG 60.203 66.667 0.00 0.00 0.00 5.12
1679 1741 1.153549 CTGCAAGGAGTAGGGCGTC 60.154 63.158 0.00 0.00 0.00 5.19
1680 1742 1.609501 TCTGCAAGGAGTAGGGCGT 60.610 57.895 0.00 0.00 0.00 5.68
1681 1743 1.153549 GTCTGCAAGGAGTAGGGCG 60.154 63.158 0.00 0.00 0.00 6.13
1682 1744 0.391793 GTGTCTGCAAGGAGTAGGGC 60.392 60.000 0.00 0.00 0.00 5.19
1683 1745 1.270907 AGTGTCTGCAAGGAGTAGGG 58.729 55.000 0.00 0.00 0.00 3.53
1684 1746 3.093057 AGTAGTGTCTGCAAGGAGTAGG 58.907 50.000 0.00 0.00 0.00 3.18
1685 1747 4.013728 AGAGTAGTGTCTGCAAGGAGTAG 58.986 47.826 0.00 0.00 0.00 2.57
1686 1748 3.759086 CAGAGTAGTGTCTGCAAGGAGTA 59.241 47.826 0.00 0.00 37.74 2.59
1687 1749 2.560542 CAGAGTAGTGTCTGCAAGGAGT 59.439 50.000 0.00 0.00 37.74 3.85
1688 1750 2.094286 CCAGAGTAGTGTCTGCAAGGAG 60.094 54.545 0.00 0.00 42.40 3.69
1689 1751 1.895798 CCAGAGTAGTGTCTGCAAGGA 59.104 52.381 0.00 0.00 42.40 3.36
1690 1752 1.674221 GCCAGAGTAGTGTCTGCAAGG 60.674 57.143 0.00 0.00 42.40 3.61
1691 1753 1.719600 GCCAGAGTAGTGTCTGCAAG 58.280 55.000 0.00 0.00 42.40 4.01
1692 1754 0.038251 CGCCAGAGTAGTGTCTGCAA 60.038 55.000 0.00 0.00 42.40 4.08
1693 1755 1.586541 CGCCAGAGTAGTGTCTGCA 59.413 57.895 0.00 0.00 42.40 4.41
1694 1756 1.153745 CCGCCAGAGTAGTGTCTGC 60.154 63.158 0.00 0.00 42.40 4.26
1695 1757 0.171455 GACCGCCAGAGTAGTGTCTG 59.829 60.000 0.00 0.00 43.23 3.51
1696 1758 0.251209 TGACCGCCAGAGTAGTGTCT 60.251 55.000 0.00 0.00 0.00 3.41
1697 1759 0.171455 CTGACCGCCAGAGTAGTGTC 59.829 60.000 0.00 0.00 45.78 3.67
1698 1760 1.251527 CCTGACCGCCAGAGTAGTGT 61.252 60.000 4.84 0.00 45.78 3.55
1699 1761 0.965866 TCCTGACCGCCAGAGTAGTG 60.966 60.000 4.84 0.00 45.78 2.74
1700 1762 0.251653 TTCCTGACCGCCAGAGTAGT 60.252 55.000 4.84 0.00 45.78 2.73
1701 1763 0.457851 CTTCCTGACCGCCAGAGTAG 59.542 60.000 4.84 0.00 45.78 2.57
1702 1764 0.039180 TCTTCCTGACCGCCAGAGTA 59.961 55.000 4.84 0.00 45.78 2.59
1703 1765 0.832135 TTCTTCCTGACCGCCAGAGT 60.832 55.000 4.84 0.00 45.78 3.24
1704 1766 0.390472 GTTCTTCCTGACCGCCAGAG 60.390 60.000 4.84 0.00 45.78 3.35
1705 1767 1.671742 GTTCTTCCTGACCGCCAGA 59.328 57.895 4.84 0.00 45.78 3.86
1706 1768 1.738099 CGTTCTTCCTGACCGCCAG 60.738 63.158 0.00 0.00 42.55 4.85
1707 1769 1.541310 ATCGTTCTTCCTGACCGCCA 61.541 55.000 0.00 0.00 30.39 5.69
1708 1770 0.806492 GATCGTTCTTCCTGACCGCC 60.806 60.000 0.00 0.00 30.39 6.13
1709 1771 0.806492 GGATCGTTCTTCCTGACCGC 60.806 60.000 0.00 0.00 30.39 5.68
1710 1772 0.818296 AGGATCGTTCTTCCTGACCG 59.182 55.000 0.00 0.00 42.11 4.79
1711 1773 1.137282 GGAGGATCGTTCTTCCTGACC 59.863 57.143 15.46 3.81 43.75 4.02
1712 1774 1.825474 TGGAGGATCGTTCTTCCTGAC 59.175 52.381 21.28 7.92 45.95 3.51
1713 1775 1.825474 GTGGAGGATCGTTCTTCCTGA 59.175 52.381 21.28 3.92 45.95 3.86
1714 1776 1.550524 TGTGGAGGATCGTTCTTCCTG 59.449 52.381 21.28 0.00 45.95 3.86
1715 1777 1.938585 TGTGGAGGATCGTTCTTCCT 58.061 50.000 21.28 11.25 45.95 3.36
1716 1778 2.762535 TTGTGGAGGATCGTTCTTCC 57.237 50.000 15.79 15.79 45.97 3.46
1717 1779 2.352960 GCATTGTGGAGGATCGTTCTTC 59.647 50.000 0.00 0.00 34.37 2.87
1718 1780 2.026822 AGCATTGTGGAGGATCGTTCTT 60.027 45.455 0.00 0.00 34.37 2.52
1719 1781 1.556911 AGCATTGTGGAGGATCGTTCT 59.443 47.619 0.00 0.00 34.37 3.01
1720 1782 1.936547 GAGCATTGTGGAGGATCGTTC 59.063 52.381 0.00 0.00 34.37 3.95
1721 1783 1.407437 GGAGCATTGTGGAGGATCGTT 60.407 52.381 0.00 0.00 34.37 3.85
1799 1861 2.437085 TCAGCGGGATTCAGAGTAGA 57.563 50.000 0.00 0.00 0.00 2.59
1825 1887 0.600557 TTACATTTGGGCAACTGCGG 59.399 50.000 0.00 0.00 43.26 5.69
1861 1923 2.636412 CGACCGTCTGGCCTCTGAA 61.636 63.158 3.32 0.00 39.70 3.02
1922 1984 0.032217 AGGAGGAGGAGGAGCTGAAG 60.032 60.000 0.00 0.00 0.00 3.02
1980 2042 1.001048 GCAGCAACAGATTGTGAAGCA 60.001 47.619 0.00 0.00 38.17 3.91
1984 2046 2.148768 CTCTGCAGCAACAGATTGTGA 58.851 47.619 9.47 0.00 45.34 3.58
2031 2096 3.623510 TGACACATAAAACGTGAAGCACA 59.376 39.130 0.00 0.00 37.80 4.57
2034 2099 5.029650 TGATGACACATAAAACGTGAAGC 57.970 39.130 0.00 0.00 37.80 3.86
2042 2107 9.636879 CCACATTTTACATGATGACACATAAAA 57.363 29.630 0.00 0.04 35.31 1.52
2054 2119 7.611079 TGACTGAATCATCCACATTTTACATGA 59.389 33.333 0.00 0.00 29.99 3.07
2086 2151 1.657822 TAACGCCGCAAAGCATCATA 58.342 45.000 0.00 0.00 0.00 2.15
2123 2188 4.351192 GTTAGCTCACAAACAACAACCAG 58.649 43.478 0.00 0.00 0.00 4.00
2170 2235 0.972983 ACTCACATACTGGCGCTCCT 60.973 55.000 7.64 0.00 0.00 3.69
2297 2363 4.874966 CCCTCTAGCATTTCAAGAACAGAG 59.125 45.833 0.00 0.00 0.00 3.35
2308 2374 1.134371 GCTTCCGACCCTCTAGCATTT 60.134 52.381 0.00 0.00 0.00 2.32
2378 2444 9.668497 CAGTGACATGGATTCAGATGATATAAT 57.332 33.333 0.00 0.00 0.00 1.28
2381 2447 6.044054 ACCAGTGACATGGATTCAGATGATAT 59.956 38.462 7.84 0.00 43.57 1.63
2382 2448 5.367644 ACCAGTGACATGGATTCAGATGATA 59.632 40.000 7.84 0.00 43.57 2.15
2383 2449 4.165565 ACCAGTGACATGGATTCAGATGAT 59.834 41.667 7.84 0.00 43.57 2.45
2384 2450 3.520721 ACCAGTGACATGGATTCAGATGA 59.479 43.478 7.84 0.00 43.57 2.92
2385 2451 3.626217 CACCAGTGACATGGATTCAGATG 59.374 47.826 7.84 0.00 43.57 2.90
2386 2452 3.520721 TCACCAGTGACATGGATTCAGAT 59.479 43.478 7.84 0.00 43.57 2.90
2396 2516 6.656902 ACATATGAGATTTCACCAGTGACAT 58.343 36.000 10.38 0.00 39.66 3.06
2398 2518 7.041721 TGTACATATGAGATTTCACCAGTGAC 58.958 38.462 10.38 0.00 39.66 3.67
2486 2606 6.973474 AGTAGCTGTTCATCTTAATACACGAC 59.027 38.462 0.00 0.00 0.00 4.34
2523 2643 3.165071 CCCATTGTCCCAGTAGCTTTTT 58.835 45.455 0.00 0.00 0.00 1.94
2524 2644 2.378547 TCCCATTGTCCCAGTAGCTTTT 59.621 45.455 0.00 0.00 0.00 2.27
2525 2645 1.992557 TCCCATTGTCCCAGTAGCTTT 59.007 47.619 0.00 0.00 0.00 3.51
2526 2646 1.668826 TCCCATTGTCCCAGTAGCTT 58.331 50.000 0.00 0.00 0.00 3.74
2527 2647 1.492176 CATCCCATTGTCCCAGTAGCT 59.508 52.381 0.00 0.00 0.00 3.32
2528 2648 1.212935 ACATCCCATTGTCCCAGTAGC 59.787 52.381 0.00 0.00 0.00 3.58
2529 2649 4.408921 TCTTACATCCCATTGTCCCAGTAG 59.591 45.833 0.00 0.00 0.00 2.57
2535 2655 6.659242 TCTTCTTTTCTTACATCCCATTGTCC 59.341 38.462 0.00 0.00 0.00 4.02
2539 2659 8.940397 TTCTTCTTCTTTTCTTACATCCCATT 57.060 30.769 0.00 0.00 0.00 3.16
2541 2661 8.760980 TTTTCTTCTTCTTTTCTTACATCCCA 57.239 30.769 0.00 0.00 0.00 4.37
2638 2764 6.157645 TGAGAAGAAAGAATAGGGATCAGCTT 59.842 38.462 0.00 0.00 0.00 3.74
2707 2833 2.263540 GCGCCTTCCACGGTTCTA 59.736 61.111 0.00 0.00 0.00 2.10
2764 2890 3.073798 TGAAATCTTACCTGAACAGCCCA 59.926 43.478 0.00 0.00 0.00 5.36
2867 2993 7.977818 TCAATTGGTCATAGCATAGATACCTT 58.022 34.615 5.42 0.00 0.00 3.50
2871 2997 7.396418 TGCATCAATTGGTCATAGCATAGATA 58.604 34.615 5.42 0.00 0.00 1.98
2975 3101 9.162764 GAGCTATGACTAAAAGGAAAATGTACA 57.837 33.333 0.00 0.00 0.00 2.90
2976 3102 9.384764 AGAGCTATGACTAAAAGGAAAATGTAC 57.615 33.333 0.00 0.00 0.00 2.90
3021 3147 5.138800 TCTATTGACGCTTTTATCAACGC 57.861 39.130 0.00 0.00 37.64 4.84
3023 3149 7.277981 TCCTCTTCTATTGACGCTTTTATCAAC 59.722 37.037 0.00 0.00 37.64 3.18
3041 3168 6.732896 TTTCTACTTCTTGTGTCCTCTTCT 57.267 37.500 0.00 0.00 0.00 2.85
3062 3189 8.042515 ACTATGCCTGACAAAATAATTGCATTT 58.957 29.630 0.00 0.00 38.89 2.32
3072 3199 7.363793 GGAAATTACCACTATGCCTGACAAAAT 60.364 37.037 0.00 0.00 0.00 1.82
3076 3203 4.523083 GGAAATTACCACTATGCCTGACA 58.477 43.478 0.00 0.00 0.00 3.58
3077 3204 3.560068 CGGAAATTACCACTATGCCTGAC 59.440 47.826 0.00 0.00 0.00 3.51
3078 3205 3.804036 CGGAAATTACCACTATGCCTGA 58.196 45.455 0.00 0.00 0.00 3.86
3079 3206 2.290641 GCGGAAATTACCACTATGCCTG 59.709 50.000 0.00 0.00 0.00 4.85
3094 3223 2.026729 TCCCAACTGTATCATGCGGAAA 60.027 45.455 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.