Multiple sequence alignment - TraesCS3A01G402900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G402900 chr3A 100.000 1187 0 0 967 2153 648188318 648189504 0.000000e+00 2193.0
1 TraesCS3A01G402900 chr3A 100.000 589 0 0 1 589 648187352 648187940 0.000000e+00 1088.0
2 TraesCS3A01G402900 chr3A 100.000 228 0 0 2432 2659 648189783 648190010 3.160000e-114 422.0
3 TraesCS3A01G402900 chr3D 84.484 1173 122 41 993 2127 512505319 512506469 0.000000e+00 1103.0
4 TraesCS3A01G402900 chr3D 81.538 390 33 21 83 463 512504843 512505202 4.330000e-73 285.0
5 TraesCS3A01G402900 chr3D 74.793 242 42 14 2432 2659 48793257 48793021 1.010000e-14 91.6
6 TraesCS3A01G402900 chr3B 91.221 729 47 10 993 1710 674677793 674678515 0.000000e+00 976.0
7 TraesCS3A01G402900 chr3B 81.425 393 20 18 83 463 674677302 674677653 3.370000e-69 272.0
8 TraesCS3A01G402900 chr3B 78.614 332 58 12 1829 2153 152829339 152829664 9.650000e-50 207.0
9 TraesCS3A01G402900 chr6D 75.962 312 63 8 1849 2153 47665795 47666101 1.650000e-32 150.0
10 TraesCS3A01G402900 chr6B 77.912 249 47 4 1867 2109 123832476 123832230 5.930000e-32 148.0
11 TraesCS3A01G402900 chr2B 77.143 175 37 3 2437 2610 95940317 95940145 6.060000e-17 99.0
12 TraesCS3A01G402900 chr2B 77.124 153 32 3 2459 2610 96048016 96047866 4.720000e-13 86.1
13 TraesCS3A01G402900 chr2B 74.432 176 42 3 2436 2610 95903319 95903146 3.670000e-09 73.1
14 TraesCS3A01G402900 chr6A 92.982 57 4 0 2554 2610 512838875 512838819 1.700000e-12 84.2
15 TraesCS3A01G402900 chr1D 89.286 56 6 0 2555 2610 12988057 12988002 1.320000e-08 71.3
16 TraesCS3A01G402900 chr7D 87.719 57 7 0 2554 2610 111789479 111789535 1.710000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G402900 chr3A 648187352 648190010 2658 False 1234.333333 2193 100.000 1 2659 3 chr3A.!!$F1 2658
1 TraesCS3A01G402900 chr3D 512504843 512506469 1626 False 694.000000 1103 83.011 83 2127 2 chr3D.!!$F1 2044
2 TraesCS3A01G402900 chr3B 674677302 674678515 1213 False 624.000000 976 86.323 83 1710 2 chr3B.!!$F2 1627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
492 517 0.111061 AACTGGAGACATGCAAGGCA 59.889 50.0 0.0 0.0 44.86 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 2042 0.107508 CCGATGGCATGTCTTGAGGT 60.108 55.0 3.81 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.235762 GCCTTGGCGCGATCCCTA 62.236 66.667 12.10 0.00 0.00 3.53
22 23 2.743718 CCTTGGCGCGATCCCTAT 59.256 61.111 12.10 0.00 0.00 2.57
23 24 1.374758 CCTTGGCGCGATCCCTATC 60.375 63.158 12.10 0.00 0.00 2.08
24 25 1.668294 CTTGGCGCGATCCCTATCT 59.332 57.895 12.10 0.00 0.00 1.98
25 26 0.888619 CTTGGCGCGATCCCTATCTA 59.111 55.000 12.10 0.00 0.00 1.98
26 27 0.888619 TTGGCGCGATCCCTATCTAG 59.111 55.000 12.10 0.00 0.00 2.43
27 28 0.251209 TGGCGCGATCCCTATCTAGT 60.251 55.000 12.10 0.00 0.00 2.57
28 29 0.889306 GGCGCGATCCCTATCTAGTT 59.111 55.000 12.10 0.00 0.00 2.24
29 30 1.135344 GGCGCGATCCCTATCTAGTTC 60.135 57.143 12.10 0.00 0.00 3.01
30 31 1.813786 GCGCGATCCCTATCTAGTTCT 59.186 52.381 12.10 0.00 0.00 3.01
31 32 3.008330 GCGCGATCCCTATCTAGTTCTA 58.992 50.000 12.10 0.00 0.00 2.10
32 33 3.064271 GCGCGATCCCTATCTAGTTCTAG 59.936 52.174 12.10 0.83 0.00 2.43
33 34 4.255301 CGCGATCCCTATCTAGTTCTAGT 58.745 47.826 0.00 0.00 0.00 2.57
34 35 5.417811 CGCGATCCCTATCTAGTTCTAGTA 58.582 45.833 0.00 0.06 0.00 1.82
35 36 6.050432 CGCGATCCCTATCTAGTTCTAGTAT 58.950 44.000 0.00 3.14 0.00 2.12
36 37 6.539464 CGCGATCCCTATCTAGTTCTAGTATT 59.461 42.308 0.00 0.00 0.00 1.89
37 38 7.710044 CGCGATCCCTATCTAGTTCTAGTATTA 59.290 40.741 0.00 0.00 0.00 0.98
38 39 9.563748 GCGATCCCTATCTAGTTCTAGTATTAT 57.436 37.037 6.73 0.00 0.00 1.28
51 52 9.747898 AGTTCTAGTATTATACATGCTAGCTCT 57.252 33.333 17.23 0.00 35.30 4.09
63 64 7.831691 ACATGCTAGCTCTAATAGAAGAAGA 57.168 36.000 17.23 0.00 0.00 2.87
64 65 7.885297 ACATGCTAGCTCTAATAGAAGAAGAG 58.115 38.462 17.23 0.00 39.81 2.85
65 66 6.892658 TGCTAGCTCTAATAGAAGAAGAGG 57.107 41.667 17.23 0.00 37.75 3.69
66 67 6.606069 TGCTAGCTCTAATAGAAGAAGAGGA 58.394 40.000 17.23 0.00 37.75 3.71
67 68 6.714810 TGCTAGCTCTAATAGAAGAAGAGGAG 59.285 42.308 17.23 0.00 37.75 3.69
68 69 6.151144 GCTAGCTCTAATAGAAGAAGAGGAGG 59.849 46.154 7.70 0.00 37.75 4.30
69 70 5.393866 AGCTCTAATAGAAGAAGAGGAGGG 58.606 45.833 0.00 0.00 37.75 4.30
70 71 4.526650 GCTCTAATAGAAGAAGAGGAGGGG 59.473 50.000 0.00 0.00 37.75 4.79
71 72 4.484912 TCTAATAGAAGAAGAGGAGGGGC 58.515 47.826 0.00 0.00 0.00 5.80
72 73 2.877154 ATAGAAGAAGAGGAGGGGCA 57.123 50.000 0.00 0.00 0.00 5.36
73 74 1.867363 TAGAAGAAGAGGAGGGGCAC 58.133 55.000 0.00 0.00 0.00 5.01
96 97 0.601558 GGTTAGACAGTCGACAGGCA 59.398 55.000 19.50 0.00 0.00 4.75
126 130 3.961729 GGTACGTGGTCAAGGCAC 58.038 61.111 0.00 0.00 0.00 5.01
128 132 1.070105 GTACGTGGTCAAGGCACCA 59.930 57.895 0.00 0.00 44.69 4.17
132 136 4.819783 TGGTCAAGGCACCATGAC 57.180 55.556 15.06 15.06 41.84 3.06
133 137 1.842714 TGGTCAAGGCACCATGACA 59.157 52.632 22.47 9.36 44.31 3.58
134 138 0.250858 TGGTCAAGGCACCATGACAG 60.251 55.000 22.47 0.00 44.31 3.51
190 195 5.133941 GTGTATCTCATCTCACCTCACCTA 58.866 45.833 0.00 0.00 0.00 3.08
216 228 0.741221 GATCAACACTCCGGTGCTCC 60.741 60.000 0.00 0.00 46.57 4.70
218 230 1.071471 CAACACTCCGGTGCTCCTT 59.929 57.895 0.00 0.00 46.57 3.36
257 269 8.931905 GCATTTCGCAAAAAGAAAAATATGAA 57.068 26.923 0.00 0.00 40.44 2.57
258 270 9.043678 GCATTTCGCAAAAAGAAAAATATGAAG 57.956 29.630 0.00 0.00 40.44 3.02
352 364 6.348950 CGATCCTGAAGTTACTCCAGCTATAG 60.349 46.154 0.00 0.00 0.00 1.31
358 370 4.483950 AGTTACTCCAGCTATAGCCATGA 58.516 43.478 21.17 13.54 43.38 3.07
359 371 4.282195 AGTTACTCCAGCTATAGCCATGAC 59.718 45.833 21.17 10.70 43.38 3.06
360 372 1.974236 ACTCCAGCTATAGCCATGACC 59.026 52.381 21.17 0.00 43.38 4.02
361 373 1.973515 CTCCAGCTATAGCCATGACCA 59.026 52.381 21.17 1.52 43.38 4.02
362 374 2.570752 CTCCAGCTATAGCCATGACCAT 59.429 50.000 21.17 0.00 43.38 3.55
363 375 3.771479 CTCCAGCTATAGCCATGACCATA 59.229 47.826 21.17 0.00 43.38 2.74
364 376 3.771479 TCCAGCTATAGCCATGACCATAG 59.229 47.826 21.17 0.00 43.38 2.23
365 377 3.118482 CCAGCTATAGCCATGACCATAGG 60.118 52.174 21.17 4.45 43.38 2.57
400 421 0.385098 GTAAAACGCCGCTGGTGAAC 60.385 55.000 13.78 4.40 36.58 3.18
474 499 2.975799 GTCGCCGTGGAGCCAAAA 60.976 61.111 0.00 0.00 0.00 2.44
475 500 2.975799 TCGCCGTGGAGCCAAAAC 60.976 61.111 0.00 0.00 0.00 2.43
488 513 1.340889 GCCAAAACTGGAGACATGCAA 59.659 47.619 0.00 0.00 41.51 4.08
489 514 2.608752 GCCAAAACTGGAGACATGCAAG 60.609 50.000 0.00 0.00 41.51 4.01
490 515 2.029649 CCAAAACTGGAGACATGCAAGG 60.030 50.000 0.00 0.00 41.51 3.61
491 516 1.251251 AAACTGGAGACATGCAAGGC 58.749 50.000 0.00 0.00 41.51 4.35
492 517 0.111061 AACTGGAGACATGCAAGGCA 59.889 50.000 0.00 0.00 44.86 4.75
493 518 0.322277 ACTGGAGACATGCAAGGCAG 60.322 55.000 0.00 0.00 43.65 4.85
494 519 1.654954 CTGGAGACATGCAAGGCAGC 61.655 60.000 0.00 0.00 43.65 5.25
501 526 4.274008 TGCAAGGCAGCAGCTGGA 62.274 61.111 24.13 0.00 40.11 3.86
502 527 3.441290 GCAAGGCAGCAGCTGGAG 61.441 66.667 24.13 0.00 41.70 3.86
503 528 3.441290 CAAGGCAGCAGCTGGAGC 61.441 66.667 24.13 9.64 41.70 4.70
528 553 3.920112 GCTACGCGCTTAAATGTTACT 57.080 42.857 5.73 0.00 35.14 2.24
529 554 3.846829 GCTACGCGCTTAAATGTTACTC 58.153 45.455 5.73 0.00 35.14 2.59
530 555 3.302286 GCTACGCGCTTAAATGTTACTCC 60.302 47.826 5.73 0.00 35.14 3.85
531 556 2.968675 ACGCGCTTAAATGTTACTCCT 58.031 42.857 5.73 0.00 0.00 3.69
532 557 4.114058 ACGCGCTTAAATGTTACTCCTA 57.886 40.909 5.73 0.00 0.00 2.94
534 559 3.244579 CGCGCTTAAATGTTACTCCTACC 59.755 47.826 5.56 0.00 0.00 3.18
535 560 4.186159 GCGCTTAAATGTTACTCCTACCA 58.814 43.478 0.00 0.00 0.00 3.25
536 561 4.033702 GCGCTTAAATGTTACTCCTACCAC 59.966 45.833 0.00 0.00 0.00 4.16
537 562 4.569564 CGCTTAAATGTTACTCCTACCACC 59.430 45.833 0.00 0.00 0.00 4.61
547 572 2.586792 CTACCACCTCCAGGCAGC 59.413 66.667 0.00 0.00 39.32 5.25
557 587 2.125753 CAGGCAGCGAGTGGAGTC 60.126 66.667 0.00 0.00 0.00 3.36
558 588 2.601666 AGGCAGCGAGTGGAGTCA 60.602 61.111 0.00 0.00 0.00 3.41
568 598 0.600557 AGTGGAGTCAAGTGAGCTCG 59.399 55.000 9.64 0.00 0.00 5.03
573 603 2.221981 GGAGTCAAGTGAGCTCGTTTTG 59.778 50.000 9.64 12.89 0.00 2.44
579 609 0.317854 GTGAGCTCGTTTTGGTTGCC 60.318 55.000 9.64 0.00 0.00 4.52
984 1014 3.606886 TCACCAACCTCTCGCTTTC 57.393 52.632 0.00 0.00 0.00 2.62
985 1015 0.756294 TCACCAACCTCTCGCTTTCA 59.244 50.000 0.00 0.00 0.00 2.69
986 1016 0.868406 CACCAACCTCTCGCTTTCAC 59.132 55.000 0.00 0.00 0.00 3.18
987 1017 0.759346 ACCAACCTCTCGCTTTCACT 59.241 50.000 0.00 0.00 0.00 3.41
988 1018 1.270358 ACCAACCTCTCGCTTTCACTC 60.270 52.381 0.00 0.00 0.00 3.51
989 1019 1.270305 CCAACCTCTCGCTTTCACTCA 60.270 52.381 0.00 0.00 0.00 3.41
990 1020 1.795286 CAACCTCTCGCTTTCACTCAC 59.205 52.381 0.00 0.00 0.00 3.51
991 1021 1.333177 ACCTCTCGCTTTCACTCACT 58.667 50.000 0.00 0.00 0.00 3.41
1005 1035 0.536260 CTCACTCTCAGCCTGAAGGG 59.464 60.000 0.00 0.00 35.18 3.95
1030 1060 4.722700 TTGAAGGCCTGGGCGCTC 62.723 66.667 5.69 15.33 43.06 5.03
1101 1136 1.299165 AGATGATGTCGTACGGCGC 60.299 57.895 16.05 10.41 41.07 6.53
1104 1139 4.842091 GATGTCGTACGGCGCGGT 62.842 66.667 24.43 24.43 41.07 5.68
1425 1473 2.997315 TGCTGGTCGGTCCTGAGG 60.997 66.667 0.00 0.00 37.33 3.86
1433 1481 1.750399 CGGTCCTGAGGCCAATTGG 60.750 63.158 20.81 20.81 38.53 3.16
1460 1508 3.149196 CTGCACACTGTAAATGGTTCCT 58.851 45.455 0.00 0.00 0.00 3.36
1480 1528 7.094592 GGTTCCTTCATTCTTCTCTTCGAATTT 60.095 37.037 0.00 0.00 0.00 1.82
1483 1531 7.020010 CCTTCATTCTTCTCTTCGAATTTGTG 58.980 38.462 0.00 0.00 0.00 3.33
1486 1534 7.576236 TCATTCTTCTCTTCGAATTTGTGTTC 58.424 34.615 0.00 0.00 0.00 3.18
1499 1547 7.449934 GAATTTGTGTTCGATTGTTTCAAGT 57.550 32.000 0.00 0.00 0.00 3.16
1500 1548 6.810888 ATTTGTGTTCGATTGTTTCAAGTG 57.189 33.333 0.00 0.00 0.00 3.16
1524 1572 3.446161 TGGTAGCTAGCAATGTCTACGTT 59.554 43.478 22.80 0.00 33.95 3.99
1525 1573 4.081862 TGGTAGCTAGCAATGTCTACGTTT 60.082 41.667 22.80 0.00 33.95 3.60
1576 1625 0.905357 AGAATTCCGTGGGAGTGAGG 59.095 55.000 0.65 0.00 31.21 3.86
1582 1631 2.044555 CGTGGGAGTGAGGCTCGTA 61.045 63.158 10.42 0.00 45.03 3.43
1604 1653 3.902261 TGTGTGTGCTGATTTGATGAC 57.098 42.857 0.00 0.00 0.00 3.06
1609 1658 3.254166 GTGTGCTGATTTGATGACTTGGT 59.746 43.478 0.00 0.00 0.00 3.67
1635 1684 3.199764 GCAAATGGCAAGCGAAACT 57.800 47.368 0.00 0.00 43.97 2.66
1711 1760 1.138661 TGCCGTGTCTCATGCATGATA 59.861 47.619 28.81 19.66 36.02 2.15
1718 1767 5.605534 GTGTCTCATGCATGATAGGTACTT 58.394 41.667 28.81 0.00 36.02 2.24
1745 1802 5.476945 ACACACATACATGTACTCTCACTCA 59.523 40.000 7.96 0.00 39.39 3.41
1746 1803 5.802451 CACACATACATGTACTCTCACTCAC 59.198 44.000 7.96 0.00 39.39 3.51
1747 1804 5.712446 ACACATACATGTACTCTCACTCACT 59.288 40.000 7.96 0.00 39.39 3.41
1748 1805 6.884836 ACACATACATGTACTCTCACTCACTA 59.115 38.462 7.96 0.00 39.39 2.74
1749 1806 7.148222 ACACATACATGTACTCTCACTCACTAC 60.148 40.741 7.96 0.00 39.39 2.73
1750 1807 6.319152 ACATACATGTACTCTCACTCACTACC 59.681 42.308 7.96 0.00 39.68 3.18
1751 1808 4.663334 ACATGTACTCTCACTCACTACCA 58.337 43.478 0.00 0.00 0.00 3.25
1752 1809 4.702612 ACATGTACTCTCACTCACTACCAG 59.297 45.833 0.00 0.00 0.00 4.00
1753 1810 3.687125 TGTACTCTCACTCACTACCAGG 58.313 50.000 0.00 0.00 0.00 4.45
1754 1811 3.329814 TGTACTCTCACTCACTACCAGGA 59.670 47.826 0.00 0.00 0.00 3.86
1755 1812 3.080300 ACTCTCACTCACTACCAGGAG 57.920 52.381 0.00 0.00 37.18 3.69
1756 1813 2.377193 ACTCTCACTCACTACCAGGAGT 59.623 50.000 0.00 0.00 44.84 3.85
1757 1814 3.587951 ACTCTCACTCACTACCAGGAGTA 59.412 47.826 0.00 0.00 42.22 2.59
1758 1815 4.043059 ACTCTCACTCACTACCAGGAGTAA 59.957 45.833 0.00 0.00 42.22 2.24
1759 1816 4.590918 TCTCACTCACTACCAGGAGTAAG 58.409 47.826 0.00 0.00 42.22 2.34
1760 1817 4.288887 TCTCACTCACTACCAGGAGTAAGA 59.711 45.833 0.00 0.00 42.22 2.10
1761 1818 4.590918 TCACTCACTACCAGGAGTAAGAG 58.409 47.826 0.00 0.00 42.22 2.85
1762 1819 3.129638 CACTCACTACCAGGAGTAAGAGC 59.870 52.174 0.00 0.00 42.22 4.09
1763 1820 3.245300 ACTCACTACCAGGAGTAAGAGCA 60.245 47.826 0.00 0.00 42.30 4.26
1764 1821 3.957497 CTCACTACCAGGAGTAAGAGCAT 59.043 47.826 0.00 0.00 30.73 3.79
1765 1822 5.125367 TCACTACCAGGAGTAAGAGCATA 57.875 43.478 0.00 0.00 0.00 3.14
1766 1823 5.706447 TCACTACCAGGAGTAAGAGCATAT 58.294 41.667 0.00 0.00 0.00 1.78
1767 1824 5.770663 TCACTACCAGGAGTAAGAGCATATC 59.229 44.000 0.00 0.00 0.00 1.63
1768 1825 5.536538 CACTACCAGGAGTAAGAGCATATCA 59.463 44.000 0.00 0.00 0.00 2.15
1788 1845 3.504134 TCAAGCCGCAAGTTGCTAATTTA 59.496 39.130 24.61 6.03 42.25 1.40
1797 1854 5.650703 GCAAGTTGCTAATTTAGACCCCTAA 59.349 40.000 20.71 0.00 40.96 2.69
1806 1863 1.952102 TAGACCCCTAAACGCCAGCG 61.952 60.000 11.05 11.05 46.03 5.18
1807 1864 3.305177 GACCCCTAAACGCCAGCGA 62.305 63.158 20.32 0.00 42.83 4.93
1809 1866 1.451387 CCCCTAAACGCCAGCGAAT 60.451 57.895 20.32 9.17 42.83 3.34
1823 1880 3.499737 GAATGCGCCCGTCCACAG 61.500 66.667 4.18 0.00 0.00 3.66
1830 1887 2.350895 CCCGTCCACAGGCATTGA 59.649 61.111 0.00 0.00 0.00 2.57
1831 1888 2.040544 CCCGTCCACAGGCATTGAC 61.041 63.158 0.00 0.00 0.00 3.18
1841 1898 0.392998 AGGCATTGACCGGTCACATC 60.393 55.000 36.40 24.89 39.66 3.06
1843 1900 1.134521 GGCATTGACCGGTCACATCTA 60.135 52.381 36.40 22.16 39.66 1.98
1847 1904 4.083003 GCATTGACCGGTCACATCTAAAAA 60.083 41.667 36.40 19.06 39.66 1.94
1859 1916 6.308766 GTCACATCTAAAAATTTGCTTCGCAT 59.691 34.615 0.00 0.00 38.76 4.73
1861 1918 8.026026 TCACATCTAAAAATTTGCTTCGCATAA 58.974 29.630 0.00 0.00 38.76 1.90
1862 1919 8.103924 CACATCTAAAAATTTGCTTCGCATAAC 58.896 33.333 0.00 0.00 38.76 1.89
1864 1921 6.682746 TCTAAAAATTTGCTTCGCATAACCA 58.317 32.000 0.00 0.00 38.76 3.67
1869 1926 2.401583 TGCTTCGCATAACCAGACAT 57.598 45.000 0.00 0.00 31.71 3.06
1886 1943 6.599638 ACCAGACATCTTAATTAGCAAACCTC 59.400 38.462 0.00 0.00 0.00 3.85
1908 2007 6.266203 TCAAATACAAAAACATGCAACGTG 57.734 33.333 0.00 0.00 0.00 4.49
1913 2012 1.833860 AAAACATGCAACGTGAACGG 58.166 45.000 7.86 0.00 44.95 4.44
1932 2031 3.145212 GGAAACGTTGCAACAACTTCT 57.855 42.857 28.01 6.83 0.00 2.85
1933 2032 3.507786 GGAAACGTTGCAACAACTTCTT 58.492 40.909 28.01 11.51 0.00 2.52
1934 2033 3.924073 GGAAACGTTGCAACAACTTCTTT 59.076 39.130 28.01 14.14 0.00 2.52
1935 2034 4.031314 GGAAACGTTGCAACAACTTCTTTC 59.969 41.667 28.01 19.96 0.00 2.62
1936 2035 2.780993 ACGTTGCAACAACTTCTTTCG 58.219 42.857 28.01 13.06 0.00 3.46
1937 2036 2.417239 ACGTTGCAACAACTTCTTTCGA 59.583 40.909 28.01 0.00 0.00 3.71
1938 2037 2.776225 CGTTGCAACAACTTCTTTCGAC 59.224 45.455 28.01 0.00 0.00 4.20
1939 2038 3.485216 CGTTGCAACAACTTCTTTCGACT 60.485 43.478 28.01 0.00 0.00 4.18
1940 2039 4.260051 CGTTGCAACAACTTCTTTCGACTA 60.260 41.667 28.01 0.00 0.00 2.59
1941 2040 5.558273 CGTTGCAACAACTTCTTTCGACTAT 60.558 40.000 28.01 0.00 0.00 2.12
1942 2041 6.199393 GTTGCAACAACTTCTTTCGACTATT 58.801 36.000 24.52 0.00 0.00 1.73
1943 2042 7.349711 GTTGCAACAACTTCTTTCGACTATTA 58.650 34.615 24.52 0.00 0.00 0.98
1944 2043 6.884187 TGCAACAACTTCTTTCGACTATTAC 58.116 36.000 0.00 0.00 0.00 1.89
1945 2044 6.073440 TGCAACAACTTCTTTCGACTATTACC 60.073 38.462 0.00 0.00 0.00 2.85
1946 2045 6.147328 GCAACAACTTCTTTCGACTATTACCT 59.853 38.462 0.00 0.00 0.00 3.08
1947 2046 7.621633 GCAACAACTTCTTTCGACTATTACCTC 60.622 40.741 0.00 0.00 0.00 3.85
1948 2047 6.989659 ACAACTTCTTTCGACTATTACCTCA 58.010 36.000 0.00 0.00 0.00 3.86
1949 2048 7.439381 ACAACTTCTTTCGACTATTACCTCAA 58.561 34.615 0.00 0.00 0.00 3.02
1950 2049 7.599245 ACAACTTCTTTCGACTATTACCTCAAG 59.401 37.037 0.00 0.00 0.00 3.02
1951 2050 7.463961 ACTTCTTTCGACTATTACCTCAAGA 57.536 36.000 0.00 0.00 0.00 3.02
1952 2051 7.314393 ACTTCTTTCGACTATTACCTCAAGAC 58.686 38.462 0.00 0.00 0.00 3.01
1953 2052 6.829229 TCTTTCGACTATTACCTCAAGACA 57.171 37.500 0.00 0.00 0.00 3.41
1954 2053 7.406031 TCTTTCGACTATTACCTCAAGACAT 57.594 36.000 0.00 0.00 0.00 3.06
1955 2054 7.258441 TCTTTCGACTATTACCTCAAGACATG 58.742 38.462 0.00 0.00 0.00 3.21
1956 2055 4.933330 TCGACTATTACCTCAAGACATGC 58.067 43.478 0.00 0.00 0.00 4.06
1957 2056 4.051922 CGACTATTACCTCAAGACATGCC 58.948 47.826 0.00 0.00 0.00 4.40
1963 2062 0.178767 CCTCAAGACATGCCATCGGA 59.821 55.000 0.00 0.00 0.00 4.55
1966 2065 1.134699 TCAAGACATGCCATCGGACTC 60.135 52.381 0.00 0.00 0.00 3.36
1985 2084 6.797033 CGGACTCTCAAAATTTGACATGTTAC 59.203 38.462 4.03 0.00 35.46 2.50
2004 2103 6.455647 TGTTACATCTACATACTGGCTATGC 58.544 40.000 0.00 0.00 36.41 3.14
2009 2108 5.869649 TCTACATACTGGCTATGCAGAAA 57.130 39.130 0.00 0.00 33.77 2.52
2019 2118 4.521639 TGGCTATGCAGAAAATCATCCATC 59.478 41.667 0.00 0.00 0.00 3.51
2020 2119 4.379186 GGCTATGCAGAAAATCATCCATCG 60.379 45.833 0.00 0.00 0.00 3.84
2021 2120 3.637998 ATGCAGAAAATCATCCATCGC 57.362 42.857 0.00 0.00 0.00 4.58
2023 2122 3.018856 TGCAGAAAATCATCCATCGCTT 58.981 40.909 0.00 0.00 0.00 4.68
2033 2132 1.379044 CCATCGCTTTCCTTGCCCT 60.379 57.895 0.00 0.00 0.00 5.19
2037 2136 2.343426 CGCTTTCCTTGCCCTTCCC 61.343 63.158 0.00 0.00 0.00 3.97
2038 2137 2.343426 GCTTTCCTTGCCCTTCCCG 61.343 63.158 0.00 0.00 0.00 5.14
2039 2138 1.378762 CTTTCCTTGCCCTTCCCGA 59.621 57.895 0.00 0.00 0.00 5.14
2041 2140 1.710996 TTTCCTTGCCCTTCCCGACA 61.711 55.000 0.00 0.00 0.00 4.35
2043 2142 2.750350 CTTGCCCTTCCCGACACT 59.250 61.111 0.00 0.00 0.00 3.55
2047 2146 1.376037 GCCCTTCCCGACACTCTTG 60.376 63.158 0.00 0.00 0.00 3.02
2051 2150 2.436087 CTTCCCGACACTCTTGCCGT 62.436 60.000 0.00 0.00 0.00 5.68
2059 2158 1.412710 ACACTCTTGCCGTTCTTCTCA 59.587 47.619 0.00 0.00 0.00 3.27
2079 2178 1.529865 ACGGAAGTAGCGCTCAAAAAC 59.470 47.619 16.34 6.07 46.88 2.43
2091 2190 3.184178 CGCTCAAAAACGCAAAATGGATT 59.816 39.130 0.00 0.00 0.00 3.01
2097 2196 0.171007 ACGCAAAATGGATTCAGCCG 59.829 50.000 0.00 0.00 0.00 5.52
2103 2202 2.267174 AATGGATTCAGCCGGATCTG 57.733 50.000 5.05 3.68 35.46 2.90
2110 2209 3.893763 AGCCGGATCTGCTCGTCG 61.894 66.667 5.05 0.00 32.41 5.12
2113 2212 3.893763 CGGATCTGCTCGTCGCCT 61.894 66.667 0.00 0.00 38.05 5.52
2116 2215 1.299014 GATCTGCTCGTCGCCTGAG 60.299 63.158 0.00 0.00 38.05 3.35
2123 2222 4.127040 CGTCGCCTGAGCTGAGCT 62.127 66.667 6.69 6.69 43.88 4.09
2127 2226 2.503546 GCCTGAGCTGAGCTACCC 59.496 66.667 7.08 0.00 39.88 3.69
2128 2227 2.811101 CCTGAGCTGAGCTACCCG 59.189 66.667 7.08 0.00 39.88 5.28
2129 2228 2.055042 CCTGAGCTGAGCTACCCGT 61.055 63.158 7.08 0.00 39.88 5.28
2130 2229 1.608717 CCTGAGCTGAGCTACCCGTT 61.609 60.000 7.08 0.00 39.88 4.44
2131 2230 0.459237 CTGAGCTGAGCTACCCGTTG 60.459 60.000 7.08 0.00 39.88 4.10
2132 2231 1.811679 GAGCTGAGCTACCCGTTGC 60.812 63.158 7.08 0.00 39.88 4.17
2133 2232 2.232298 GAGCTGAGCTACCCGTTGCT 62.232 60.000 7.08 3.40 43.88 3.91
2134 2233 2.103042 GCTGAGCTACCCGTTGCTG 61.103 63.158 8.51 0.00 41.45 4.41
2135 2234 1.293498 CTGAGCTACCCGTTGCTGT 59.707 57.895 8.51 0.00 41.45 4.40
2136 2235 0.737715 CTGAGCTACCCGTTGCTGTC 60.738 60.000 8.51 0.00 41.45 3.51
2137 2236 1.448013 GAGCTACCCGTTGCTGTCC 60.448 63.158 8.51 0.00 41.45 4.02
2138 2237 1.889530 GAGCTACCCGTTGCTGTCCT 61.890 60.000 8.51 0.00 41.45 3.85
2139 2238 1.448013 GCTACCCGTTGCTGTCCTC 60.448 63.158 0.00 0.00 0.00 3.71
2140 2239 1.889530 GCTACCCGTTGCTGTCCTCT 61.890 60.000 0.00 0.00 0.00 3.69
2141 2240 0.608640 CTACCCGTTGCTGTCCTCTT 59.391 55.000 0.00 0.00 0.00 2.85
2142 2241 1.002087 CTACCCGTTGCTGTCCTCTTT 59.998 52.381 0.00 0.00 0.00 2.52
2143 2242 0.250338 ACCCGTTGCTGTCCTCTTTC 60.250 55.000 0.00 0.00 0.00 2.62
2144 2243 0.035458 CCCGTTGCTGTCCTCTTTCT 59.965 55.000 0.00 0.00 0.00 2.52
2145 2244 1.433534 CCGTTGCTGTCCTCTTTCTC 58.566 55.000 0.00 0.00 0.00 2.87
2146 2245 1.433534 CGTTGCTGTCCTCTTTCTCC 58.566 55.000 0.00 0.00 0.00 3.71
2147 2246 1.001406 CGTTGCTGTCCTCTTTCTCCT 59.999 52.381 0.00 0.00 0.00 3.69
2148 2247 2.694213 GTTGCTGTCCTCTTTCTCCTC 58.306 52.381 0.00 0.00 0.00 3.71
2149 2248 1.270907 TGCTGTCCTCTTTCTCCTCC 58.729 55.000 0.00 0.00 0.00 4.30
2150 2249 1.203237 TGCTGTCCTCTTTCTCCTCCT 60.203 52.381 0.00 0.00 0.00 3.69
2151 2250 1.905894 GCTGTCCTCTTTCTCCTCCTT 59.094 52.381 0.00 0.00 0.00 3.36
2152 2251 2.304470 GCTGTCCTCTTTCTCCTCCTTT 59.696 50.000 0.00 0.00 0.00 3.11
2449 2548 3.383026 CACAGACCGCCGAATTTTG 57.617 52.632 0.00 0.00 0.00 2.44
2450 2549 0.729140 CACAGACCGCCGAATTTTGC 60.729 55.000 0.00 0.00 0.00 3.68
2451 2550 0.889186 ACAGACCGCCGAATTTTGCT 60.889 50.000 0.00 0.00 0.00 3.91
2452 2551 0.179189 CAGACCGCCGAATTTTGCTC 60.179 55.000 0.00 0.00 0.00 4.26
2453 2552 1.136774 GACCGCCGAATTTTGCTCC 59.863 57.895 0.00 0.00 0.00 4.70
2454 2553 2.266376 GACCGCCGAATTTTGCTCCC 62.266 60.000 0.00 0.00 0.00 4.30
2455 2554 2.100216 CGCCGAATTTTGCTCCCG 59.900 61.111 0.00 0.00 0.00 5.14
2456 2555 2.489751 GCCGAATTTTGCTCCCGG 59.510 61.111 0.00 0.00 42.74 5.73
2457 2556 3.063743 GCCGAATTTTGCTCCCGGG 62.064 63.158 16.85 16.85 40.44 5.73
2458 2557 2.489751 CGAATTTTGCTCCCGGGC 59.510 61.111 18.49 5.48 0.00 6.13
2459 2558 2.489751 GAATTTTGCTCCCGGGCG 59.510 61.111 18.49 12.16 34.52 6.13
2460 2559 2.034999 AATTTTGCTCCCGGGCGA 59.965 55.556 18.49 1.00 34.52 5.54
2461 2560 1.993369 GAATTTTGCTCCCGGGCGAG 61.993 60.000 18.49 10.79 34.52 5.03
2462 2561 3.995506 ATTTTGCTCCCGGGCGAGG 62.996 63.158 18.49 6.93 34.52 4.63
2478 2577 4.692475 GGGGCACGCGTGTTACCT 62.692 66.667 36.80 0.00 0.00 3.08
2479 2578 3.116531 GGGCACGCGTGTTACCTC 61.117 66.667 36.80 19.07 0.00 3.85
2480 2579 3.475774 GGCACGCGTGTTACCTCG 61.476 66.667 36.80 12.75 0.00 4.63
2481 2580 2.732094 GCACGCGTGTTACCTCGT 60.732 61.111 36.80 0.00 35.35 4.18
2482 2581 2.305127 GCACGCGTGTTACCTCGTT 61.305 57.895 36.80 0.00 32.38 3.85
2483 2582 1.485514 CACGCGTGTTACCTCGTTG 59.514 57.895 30.50 0.20 32.38 4.10
2484 2583 2.305127 ACGCGTGTTACCTCGTTGC 61.305 57.895 12.93 0.00 0.00 4.17
2485 2584 2.858158 GCGTGTTACCTCGTTGCC 59.142 61.111 0.00 0.00 0.00 4.52
2486 2585 3.007070 GCGTGTTACCTCGTTGCCG 62.007 63.158 0.00 0.00 0.00 5.69
2487 2586 2.858158 GTGTTACCTCGTTGCCGC 59.142 61.111 0.00 0.00 0.00 6.53
2488 2587 1.666872 GTGTTACCTCGTTGCCGCT 60.667 57.895 0.00 0.00 0.00 5.52
2489 2588 0.388907 GTGTTACCTCGTTGCCGCTA 60.389 55.000 0.00 0.00 0.00 4.26
2490 2589 0.388907 TGTTACCTCGTTGCCGCTAC 60.389 55.000 0.00 0.00 0.00 3.58
2491 2590 0.108945 GTTACCTCGTTGCCGCTACT 60.109 55.000 3.48 0.00 0.00 2.57
2492 2591 0.604578 TTACCTCGTTGCCGCTACTT 59.395 50.000 3.48 0.00 0.00 2.24
2493 2592 0.171903 TACCTCGTTGCCGCTACTTC 59.828 55.000 3.48 0.00 0.00 3.01
2494 2593 1.080093 CCTCGTTGCCGCTACTTCA 60.080 57.895 3.48 0.00 0.00 3.02
2495 2594 1.078759 CCTCGTTGCCGCTACTTCAG 61.079 60.000 3.48 0.00 0.00 3.02
2496 2595 1.078759 CTCGTTGCCGCTACTTCAGG 61.079 60.000 3.48 0.00 0.00 3.86
2497 2596 1.080093 CGTTGCCGCTACTTCAGGA 60.080 57.895 3.48 0.00 0.00 3.86
2498 2597 0.460284 CGTTGCCGCTACTTCAGGAT 60.460 55.000 3.48 0.00 0.00 3.24
2499 2598 1.009829 GTTGCCGCTACTTCAGGATG 58.990 55.000 0.00 0.00 37.54 3.51
2500 2599 0.744414 TTGCCGCTACTTCAGGATGC 60.744 55.000 0.00 0.00 34.76 3.91
2501 2600 2.240500 GCCGCTACTTCAGGATGCG 61.241 63.158 0.00 0.00 45.22 4.73
2502 2601 4.018609 CGCTACTTCAGGATGCGG 57.981 61.111 0.00 0.00 42.46 5.69
2503 2602 1.592669 CGCTACTTCAGGATGCGGG 60.593 63.158 0.00 0.00 42.46 6.13
2504 2603 1.889573 GCTACTTCAGGATGCGGGC 60.890 63.158 0.00 0.00 34.76 6.13
2505 2604 1.522092 CTACTTCAGGATGCGGGCA 59.478 57.895 0.00 0.00 34.76 5.36
2506 2605 0.811616 CTACTTCAGGATGCGGGCAC 60.812 60.000 0.00 0.00 34.76 5.01
2507 2606 1.549243 TACTTCAGGATGCGGGCACA 61.549 55.000 0.00 0.00 34.76 4.57
2508 2607 1.675310 CTTCAGGATGCGGGCACAA 60.675 57.895 0.00 0.00 34.76 3.33
2509 2608 1.228398 TTCAGGATGCGGGCACAAA 60.228 52.632 0.00 0.00 34.76 2.83
2510 2609 0.611618 TTCAGGATGCGGGCACAAAT 60.612 50.000 0.00 0.00 34.76 2.32
2511 2610 1.140161 CAGGATGCGGGCACAAATG 59.860 57.895 0.00 0.00 0.00 2.32
2512 2611 1.001020 AGGATGCGGGCACAAATGA 60.001 52.632 0.00 0.00 0.00 2.57
2513 2612 1.139520 GGATGCGGGCACAAATGAC 59.860 57.895 0.00 0.00 0.00 3.06
2514 2613 1.315257 GGATGCGGGCACAAATGACT 61.315 55.000 0.00 0.00 32.54 3.41
2515 2614 0.527565 GATGCGGGCACAAATGACTT 59.472 50.000 0.00 0.00 32.54 3.01
2516 2615 0.527565 ATGCGGGCACAAATGACTTC 59.472 50.000 0.00 0.00 32.54 3.01
2517 2616 1.212751 GCGGGCACAAATGACTTCC 59.787 57.895 0.00 0.00 32.54 3.46
2518 2617 1.244019 GCGGGCACAAATGACTTCCT 61.244 55.000 0.00 0.00 32.54 3.36
2519 2618 0.804989 CGGGCACAAATGACTTCCTC 59.195 55.000 0.00 0.00 32.54 3.71
2520 2619 1.177401 GGGCACAAATGACTTCCTCC 58.823 55.000 0.00 0.00 32.54 4.30
2521 2620 1.272147 GGGCACAAATGACTTCCTCCT 60.272 52.381 0.00 0.00 32.54 3.69
2522 2621 2.087646 GGCACAAATGACTTCCTCCTC 58.912 52.381 0.00 0.00 0.00 3.71
2523 2622 2.087646 GCACAAATGACTTCCTCCTCC 58.912 52.381 0.00 0.00 0.00 4.30
2524 2623 2.553028 GCACAAATGACTTCCTCCTCCA 60.553 50.000 0.00 0.00 0.00 3.86
2525 2624 3.875369 GCACAAATGACTTCCTCCTCCAT 60.875 47.826 0.00 0.00 0.00 3.41
2526 2625 4.626287 GCACAAATGACTTCCTCCTCCATA 60.626 45.833 0.00 0.00 0.00 2.74
2527 2626 5.121811 CACAAATGACTTCCTCCTCCATAG 58.878 45.833 0.00 0.00 0.00 2.23
2528 2627 4.785376 ACAAATGACTTCCTCCTCCATAGT 59.215 41.667 0.00 0.00 0.00 2.12
2529 2628 5.964477 ACAAATGACTTCCTCCTCCATAGTA 59.036 40.000 0.00 0.00 0.00 1.82
2530 2629 6.098982 ACAAATGACTTCCTCCTCCATAGTAG 59.901 42.308 0.00 0.00 0.00 2.57
2531 2630 3.567397 TGACTTCCTCCTCCATAGTAGC 58.433 50.000 0.00 0.00 0.00 3.58
2532 2631 2.554893 GACTTCCTCCTCCATAGTAGCG 59.445 54.545 0.00 0.00 0.00 4.26
2533 2632 1.271102 CTTCCTCCTCCATAGTAGCGC 59.729 57.143 0.00 0.00 0.00 5.92
2534 2633 0.889638 TCCTCCTCCATAGTAGCGCG 60.890 60.000 0.00 0.00 0.00 6.86
2535 2634 1.081108 CTCCTCCATAGTAGCGCGC 60.081 63.158 26.66 26.66 0.00 6.86
2536 2635 2.429236 CCTCCATAGTAGCGCGCG 60.429 66.667 28.44 28.44 0.00 6.86
2537 2636 3.100191 CTCCATAGTAGCGCGCGC 61.100 66.667 45.10 45.10 42.33 6.86
2538 2637 4.640855 TCCATAGTAGCGCGCGCC 62.641 66.667 46.98 33.91 43.17 6.53
2539 2638 4.942481 CCATAGTAGCGCGCGCCA 62.942 66.667 46.98 35.80 43.17 5.69
2540 2639 3.692367 CATAGTAGCGCGCGCCAC 61.692 66.667 46.98 43.05 43.17 5.01
2541 2640 4.944372 ATAGTAGCGCGCGCCACC 62.944 66.667 46.98 34.19 43.17 4.61
2553 2652 3.799755 GCCACCGCATCCGTTGAC 61.800 66.667 0.00 0.00 34.03 3.18
2554 2653 2.047274 CCACCGCATCCGTTGACT 60.047 61.111 0.00 0.00 0.00 3.41
2555 2654 2.100631 CCACCGCATCCGTTGACTC 61.101 63.158 0.00 0.00 0.00 3.36
2556 2655 2.100631 CACCGCATCCGTTGACTCC 61.101 63.158 0.00 0.00 0.00 3.85
2557 2656 2.885644 CCGCATCCGTTGACTCCG 60.886 66.667 0.00 0.00 0.00 4.63
2558 2657 3.554692 CGCATCCGTTGACTCCGC 61.555 66.667 0.00 0.00 0.00 5.54
2559 2658 3.195698 GCATCCGTTGACTCCGCC 61.196 66.667 0.00 0.00 0.00 6.13
2560 2659 2.885644 CATCCGTTGACTCCGCCG 60.886 66.667 0.00 0.00 0.00 6.46
2561 2660 4.814294 ATCCGTTGACTCCGCCGC 62.814 66.667 0.00 0.00 0.00 6.53
2581 2680 4.457496 CCATGTCGGCAGCGAGGT 62.457 66.667 0.00 0.00 0.00 3.85
2582 2681 3.190849 CATGTCGGCAGCGAGGTG 61.191 66.667 0.00 0.00 0.00 4.00
2583 2682 3.695606 ATGTCGGCAGCGAGGTGT 61.696 61.111 0.00 0.00 0.00 4.16
2584 2683 3.939837 ATGTCGGCAGCGAGGTGTG 62.940 63.158 0.00 0.00 0.00 3.82
2595 2694 4.643387 AGGTGTGCCTCGGCCAAC 62.643 66.667 2.24 5.96 42.67 3.77
2597 2696 4.643387 GTGTGCCTCGGCCAACCT 62.643 66.667 2.24 0.00 41.09 3.50
2598 2697 3.884774 TGTGCCTCGGCCAACCTT 61.885 61.111 2.24 0.00 41.09 3.50
2599 2698 2.349755 GTGCCTCGGCCAACCTTA 59.650 61.111 2.24 0.00 41.09 2.69
2600 2699 1.077716 GTGCCTCGGCCAACCTTAT 60.078 57.895 2.24 0.00 41.09 1.73
2601 2700 1.095807 GTGCCTCGGCCAACCTTATC 61.096 60.000 2.24 0.00 41.09 1.75
2602 2701 1.526225 GCCTCGGCCAACCTTATCC 60.526 63.158 2.24 0.00 34.56 2.59
2603 2702 1.984288 GCCTCGGCCAACCTTATCCT 61.984 60.000 2.24 0.00 34.56 3.24
2604 2703 0.106894 CCTCGGCCAACCTTATCCTC 59.893 60.000 2.24 0.00 0.00 3.71
2605 2704 1.123928 CTCGGCCAACCTTATCCTCT 58.876 55.000 2.24 0.00 0.00 3.69
2606 2705 1.069358 CTCGGCCAACCTTATCCTCTC 59.931 57.143 2.24 0.00 0.00 3.20
2607 2706 0.106894 CGGCCAACCTTATCCTCTCC 59.893 60.000 2.24 0.00 0.00 3.71
2608 2707 1.512735 GGCCAACCTTATCCTCTCCT 58.487 55.000 0.00 0.00 0.00 3.69
2609 2708 1.847088 GGCCAACCTTATCCTCTCCTT 59.153 52.381 0.00 0.00 0.00 3.36
2610 2709 2.422093 GGCCAACCTTATCCTCTCCTTG 60.422 54.545 0.00 0.00 0.00 3.61
2611 2710 2.924421 CCAACCTTATCCTCTCCTTGC 58.076 52.381 0.00 0.00 0.00 4.01
2612 2711 2.507471 CCAACCTTATCCTCTCCTTGCT 59.493 50.000 0.00 0.00 0.00 3.91
2613 2712 3.711704 CCAACCTTATCCTCTCCTTGCTA 59.288 47.826 0.00 0.00 0.00 3.49
2614 2713 4.202305 CCAACCTTATCCTCTCCTTGCTAG 60.202 50.000 0.00 0.00 0.00 3.42
2615 2714 2.969262 ACCTTATCCTCTCCTTGCTAGC 59.031 50.000 8.10 8.10 0.00 3.42
2616 2715 2.301583 CCTTATCCTCTCCTTGCTAGCC 59.698 54.545 13.29 0.00 0.00 3.93
2617 2716 2.775490 TATCCTCTCCTTGCTAGCCA 57.225 50.000 13.29 0.00 0.00 4.75
2618 2717 1.422531 ATCCTCTCCTTGCTAGCCAG 58.577 55.000 13.29 10.89 0.00 4.85
2619 2718 0.689080 TCCTCTCCTTGCTAGCCAGG 60.689 60.000 25.58 25.58 0.00 4.45
2620 2719 1.145819 CTCTCCTTGCTAGCCAGGC 59.854 63.158 26.47 1.84 0.00 4.85
2621 2720 2.191641 CTCCTTGCTAGCCAGGCC 59.808 66.667 26.47 0.00 0.00 5.19
2622 2721 3.746949 CTCCTTGCTAGCCAGGCCG 62.747 68.421 26.47 16.96 0.00 6.13
2623 2722 4.101448 CCTTGCTAGCCAGGCCGT 62.101 66.667 21.01 0.00 0.00 5.68
2624 2723 2.821366 CTTGCTAGCCAGGCCGTG 60.821 66.667 13.29 0.00 0.00 4.94
2625 2724 3.612247 CTTGCTAGCCAGGCCGTGT 62.612 63.158 13.29 0.00 0.00 4.49
2626 2725 2.238847 CTTGCTAGCCAGGCCGTGTA 62.239 60.000 13.29 0.00 0.00 2.90
2627 2726 2.107141 GCTAGCCAGGCCGTGTAG 59.893 66.667 8.22 4.30 0.00 2.74
2628 2727 2.815308 CTAGCCAGGCCGTGTAGG 59.185 66.667 8.22 0.00 44.97 3.18
2629 2728 1.756950 CTAGCCAGGCCGTGTAGGA 60.757 63.158 8.22 0.00 45.00 2.94
2638 2737 2.778187 GCCGTGTAGGACTCATACTC 57.222 55.000 2.73 0.00 45.00 2.59
2639 2738 1.337387 GCCGTGTAGGACTCATACTCC 59.663 57.143 2.73 0.00 45.00 3.85
2640 2739 1.602851 CCGTGTAGGACTCATACTCCG 59.397 57.143 2.73 4.95 45.00 4.63
2641 2740 1.602851 CGTGTAGGACTCATACTCCGG 59.397 57.143 0.00 0.00 32.45 5.14
2642 2741 1.337387 GTGTAGGACTCATACTCCGGC 59.663 57.143 0.00 0.00 32.45 6.13
2643 2742 0.592148 GTAGGACTCATACTCCGGCG 59.408 60.000 0.00 0.00 32.45 6.46
2644 2743 0.536687 TAGGACTCATACTCCGGCGG 60.537 60.000 22.51 22.51 32.45 6.13
2645 2744 1.826921 GGACTCATACTCCGGCGGA 60.827 63.158 29.14 29.14 0.00 5.54
2646 2745 1.359475 GACTCATACTCCGGCGGAC 59.641 63.158 27.46 9.05 0.00 4.79
2647 2746 2.073037 GACTCATACTCCGGCGGACC 62.073 65.000 27.46 2.98 0.00 4.46
2657 2756 2.511600 GGCGGACCGAAGATGGTG 60.512 66.667 20.50 0.00 44.01 4.17
2658 2757 2.577059 GCGGACCGAAGATGGTGA 59.423 61.111 20.50 0.00 44.01 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.537206 ATAGGGATCGCGCCAAGGC 62.537 63.158 0.00 0.00 37.85 4.35
5 6 1.374758 GATAGGGATCGCGCCAAGG 60.375 63.158 0.00 0.00 0.00 3.61
6 7 0.888619 TAGATAGGGATCGCGCCAAG 59.111 55.000 0.00 0.00 37.15 3.61
7 8 0.888619 CTAGATAGGGATCGCGCCAA 59.111 55.000 0.00 0.00 37.15 4.52
8 9 0.251209 ACTAGATAGGGATCGCGCCA 60.251 55.000 0.00 0.00 37.15 5.69
9 10 0.889306 AACTAGATAGGGATCGCGCC 59.111 55.000 0.00 0.00 37.15 6.53
10 11 1.813786 AGAACTAGATAGGGATCGCGC 59.186 52.381 0.00 0.00 37.15 6.86
11 12 4.255301 ACTAGAACTAGATAGGGATCGCG 58.745 47.826 14.64 0.00 37.15 5.87
12 13 7.868906 AATACTAGAACTAGATAGGGATCGC 57.131 40.000 14.64 0.54 37.15 4.58
25 26 9.747898 AGAGCTAGCATGTATAATACTAGAACT 57.252 33.333 18.83 0.00 33.66 3.01
37 38 9.527157 TCTTCTTCTATTAGAGCTAGCATGTAT 57.473 33.333 18.83 7.51 0.00 2.29
38 39 8.926092 TCTTCTTCTATTAGAGCTAGCATGTA 57.074 34.615 18.83 1.85 0.00 2.29
39 40 7.039784 CCTCTTCTTCTATTAGAGCTAGCATGT 60.040 40.741 18.83 2.93 35.24 3.21
40 41 7.176515 TCCTCTTCTTCTATTAGAGCTAGCATG 59.823 40.741 18.83 0.00 35.24 4.06
41 42 7.237982 TCCTCTTCTTCTATTAGAGCTAGCAT 58.762 38.462 18.83 7.64 35.24 3.79
42 43 6.606069 TCCTCTTCTTCTATTAGAGCTAGCA 58.394 40.000 18.83 0.00 35.24 3.49
43 44 6.151144 CCTCCTCTTCTTCTATTAGAGCTAGC 59.849 46.154 6.62 6.62 35.24 3.42
44 45 6.659242 CCCTCCTCTTCTTCTATTAGAGCTAG 59.341 46.154 0.00 0.00 35.24 3.42
45 46 6.468066 CCCCTCCTCTTCTTCTATTAGAGCTA 60.468 46.154 0.00 0.00 35.24 3.32
46 47 5.393866 CCCTCCTCTTCTTCTATTAGAGCT 58.606 45.833 0.00 0.00 35.24 4.09
47 48 4.526650 CCCCTCCTCTTCTTCTATTAGAGC 59.473 50.000 0.00 0.00 35.24 4.09
48 49 4.526650 GCCCCTCCTCTTCTTCTATTAGAG 59.473 50.000 0.00 0.00 36.11 2.43
49 50 4.078571 TGCCCCTCCTCTTCTTCTATTAGA 60.079 45.833 0.00 0.00 0.00 2.10
50 51 4.039852 GTGCCCCTCCTCTTCTTCTATTAG 59.960 50.000 0.00 0.00 0.00 1.73
51 52 3.967987 GTGCCCCTCCTCTTCTTCTATTA 59.032 47.826 0.00 0.00 0.00 0.98
52 53 2.774809 GTGCCCCTCCTCTTCTTCTATT 59.225 50.000 0.00 0.00 0.00 1.73
53 54 2.403561 GTGCCCCTCCTCTTCTTCTAT 58.596 52.381 0.00 0.00 0.00 1.98
54 55 1.622725 GGTGCCCCTCCTCTTCTTCTA 60.623 57.143 0.00 0.00 0.00 2.10
55 56 0.912006 GGTGCCCCTCCTCTTCTTCT 60.912 60.000 0.00 0.00 0.00 2.85
56 57 0.912006 AGGTGCCCCTCCTCTTCTTC 60.912 60.000 0.00 0.00 35.62 2.87
57 58 0.417841 TAGGTGCCCCTCCTCTTCTT 59.582 55.000 0.00 0.00 41.45 2.52
58 59 0.031616 CTAGGTGCCCCTCCTCTTCT 60.032 60.000 0.00 0.00 41.45 2.85
59 60 1.051556 CCTAGGTGCCCCTCCTCTTC 61.052 65.000 0.00 0.00 41.45 2.87
60 61 1.003573 CCTAGGTGCCCCTCCTCTT 59.996 63.158 0.00 0.00 41.45 2.85
61 62 1.827492 AACCTAGGTGCCCCTCCTCT 61.827 60.000 17.14 0.00 41.45 3.69
62 63 0.031414 TAACCTAGGTGCCCCTCCTC 60.031 60.000 17.14 0.00 41.45 3.71
63 64 0.031010 CTAACCTAGGTGCCCCTCCT 60.031 60.000 17.14 0.00 41.45 3.69
64 65 0.031414 TCTAACCTAGGTGCCCCTCC 60.031 60.000 17.14 0.00 41.45 4.30
65 66 1.121378 GTCTAACCTAGGTGCCCCTC 58.879 60.000 17.14 0.82 41.45 4.30
66 67 0.416231 TGTCTAACCTAGGTGCCCCT 59.584 55.000 17.14 0.97 45.51 4.79
67 68 0.831307 CTGTCTAACCTAGGTGCCCC 59.169 60.000 17.14 5.08 0.00 5.80
68 69 1.481363 GACTGTCTAACCTAGGTGCCC 59.519 57.143 17.14 4.69 0.00 5.36
69 70 1.134560 CGACTGTCTAACCTAGGTGCC 59.865 57.143 17.14 4.32 0.00 5.01
70 71 2.089980 TCGACTGTCTAACCTAGGTGC 58.910 52.381 17.14 7.12 0.00 5.01
71 72 3.079578 TGTCGACTGTCTAACCTAGGTG 58.920 50.000 17.14 3.69 0.00 4.00
72 73 3.345414 CTGTCGACTGTCTAACCTAGGT 58.655 50.000 17.92 9.21 0.00 3.08
73 74 2.683867 CCTGTCGACTGTCTAACCTAGG 59.316 54.545 17.92 7.41 0.00 3.02
74 75 2.097791 GCCTGTCGACTGTCTAACCTAG 59.902 54.545 17.92 1.09 0.00 3.02
75 76 2.089980 GCCTGTCGACTGTCTAACCTA 58.910 52.381 17.92 0.00 0.00 3.08
76 77 0.889306 GCCTGTCGACTGTCTAACCT 59.111 55.000 17.92 0.00 0.00 3.50
77 78 0.601558 TGCCTGTCGACTGTCTAACC 59.398 55.000 17.92 1.21 0.00 2.85
78 79 1.269998 AGTGCCTGTCGACTGTCTAAC 59.730 52.381 17.92 10.66 0.00 2.34
79 80 1.269723 CAGTGCCTGTCGACTGTCTAA 59.730 52.381 17.92 0.00 35.78 2.10
80 81 0.881796 CAGTGCCTGTCGACTGTCTA 59.118 55.000 17.92 2.01 35.78 2.59
81 82 1.662608 CAGTGCCTGTCGACTGTCT 59.337 57.895 17.92 10.86 35.78 3.41
123 127 3.490759 CGACGCCTGTCATGGTGC 61.491 66.667 0.00 0.00 45.80 5.01
124 128 3.490759 GCGACGCCTGTCATGGTG 61.491 66.667 9.14 0.00 45.80 4.17
125 129 3.695606 AGCGACGCCTGTCATGGT 61.696 61.111 17.79 0.00 45.80 3.55
126 130 3.190849 CAGCGACGCCTGTCATGG 61.191 66.667 17.79 0.00 45.80 3.66
134 138 4.194720 ATCCTCGACAGCGACGCC 62.195 66.667 17.79 0.00 42.51 5.68
190 195 1.078848 GGAGTGTTGATCAGCCGCT 60.079 57.895 7.13 8.49 0.00 5.52
216 228 2.882876 GCATGTCCTGCCAGCAAG 59.117 61.111 0.00 0.00 45.66 4.01
236 248 9.743057 TCTTCTTCATATTTTTCTTTTTGCGAA 57.257 25.926 0.00 0.00 0.00 4.70
237 249 9.398170 CTCTTCTTCATATTTTTCTTTTTGCGA 57.602 29.630 0.00 0.00 0.00 5.10
238 250 9.398170 TCTCTTCTTCATATTTTTCTTTTTGCG 57.602 29.630 0.00 0.00 0.00 4.85
245 257 9.683870 AGCATTCTCTCTTCTTCATATTTTTCT 57.316 29.630 0.00 0.00 0.00 2.52
246 258 9.934190 GAGCATTCTCTCTTCTTCATATTTTTC 57.066 33.333 0.00 0.00 36.42 2.29
247 259 9.683870 AGAGCATTCTCTCTTCTTCATATTTTT 57.316 29.630 0.00 0.00 46.32 1.94
248 260 9.111613 CAGAGCATTCTCTCTTCTTCATATTTT 57.888 33.333 0.00 0.00 46.32 1.82
249 261 7.716123 CCAGAGCATTCTCTCTTCTTCATATTT 59.284 37.037 0.00 0.00 46.32 1.40
250 262 7.147514 ACCAGAGCATTCTCTCTTCTTCATATT 60.148 37.037 0.00 0.00 46.32 1.28
251 263 6.327104 ACCAGAGCATTCTCTCTTCTTCATAT 59.673 38.462 0.00 0.00 46.32 1.78
252 264 5.660417 ACCAGAGCATTCTCTCTTCTTCATA 59.340 40.000 0.00 0.00 46.32 2.15
253 265 4.470664 ACCAGAGCATTCTCTCTTCTTCAT 59.529 41.667 0.00 0.00 46.32 2.57
254 266 3.837146 ACCAGAGCATTCTCTCTTCTTCA 59.163 43.478 0.00 0.00 46.32 3.02
255 267 4.470334 ACCAGAGCATTCTCTCTTCTTC 57.530 45.455 0.00 0.00 46.32 2.87
256 268 4.161377 GGTACCAGAGCATTCTCTCTTCTT 59.839 45.833 7.15 0.00 46.32 2.52
257 269 3.704061 GGTACCAGAGCATTCTCTCTTCT 59.296 47.826 7.15 0.00 46.32 2.85
258 270 3.704061 AGGTACCAGAGCATTCTCTCTTC 59.296 47.826 15.94 0.00 46.32 2.87
259 271 3.718723 AGGTACCAGAGCATTCTCTCTT 58.281 45.455 15.94 0.00 46.32 2.85
260 272 3.396685 AGGTACCAGAGCATTCTCTCT 57.603 47.619 15.94 0.00 46.32 3.10
330 342 4.585162 GCTATAGCTGGAGTAACTTCAGGA 59.415 45.833 17.75 0.00 37.56 3.86
333 345 4.286707 TGGCTATAGCTGGAGTAACTTCA 58.713 43.478 23.53 6.27 41.70 3.02
352 364 1.228367 CCTGGCCTATGGTCATGGC 60.228 63.158 3.32 12.67 45.42 4.40
365 377 2.124507 TTACACTGTCCTGGCCTGGC 62.125 60.000 23.46 17.91 0.00 4.85
366 378 0.400213 TTTACACTGTCCTGGCCTGG 59.600 55.000 22.36 22.36 0.00 4.45
406 427 1.251002 CACGATTCGTACCGTTAAGCG 59.749 52.381 11.99 0.00 38.32 4.68
463 488 1.239347 GTCTCCAGTTTTGGCTCCAC 58.761 55.000 0.00 0.00 44.63 4.02
465 490 1.815003 CATGTCTCCAGTTTTGGCTCC 59.185 52.381 0.00 0.00 44.63 4.70
466 491 1.200948 GCATGTCTCCAGTTTTGGCTC 59.799 52.381 0.00 0.00 44.63 4.70
467 492 1.251251 GCATGTCTCCAGTTTTGGCT 58.749 50.000 0.00 0.00 44.63 4.75
469 494 2.029649 CCTTGCATGTCTCCAGTTTTGG 60.030 50.000 0.00 0.00 46.49 3.28
470 495 2.608752 GCCTTGCATGTCTCCAGTTTTG 60.609 50.000 0.00 0.00 0.00 2.44
471 496 1.615392 GCCTTGCATGTCTCCAGTTTT 59.385 47.619 0.00 0.00 0.00 2.43
472 497 1.251251 GCCTTGCATGTCTCCAGTTT 58.749 50.000 0.00 0.00 0.00 2.66
473 498 0.111061 TGCCTTGCATGTCTCCAGTT 59.889 50.000 0.00 0.00 31.71 3.16
474 499 0.322277 CTGCCTTGCATGTCTCCAGT 60.322 55.000 0.00 0.00 38.13 4.00
475 500 1.654954 GCTGCCTTGCATGTCTCCAG 61.655 60.000 0.00 0.00 38.13 3.86
513 538 4.033702 GTGGTAGGAGTAACATTTAAGCGC 59.966 45.833 0.00 0.00 0.00 5.92
518 543 5.343715 TGGAGGTGGTAGGAGTAACATTTA 58.656 41.667 0.00 0.00 0.00 1.40
519 544 4.172807 TGGAGGTGGTAGGAGTAACATTT 58.827 43.478 0.00 0.00 0.00 2.32
521 546 3.375699 CTGGAGGTGGTAGGAGTAACAT 58.624 50.000 0.00 0.00 0.00 2.71
523 548 2.108970 CCTGGAGGTGGTAGGAGTAAC 58.891 57.143 0.00 0.00 33.33 2.50
524 549 1.621622 GCCTGGAGGTGGTAGGAGTAA 60.622 57.143 0.00 0.00 37.57 2.24
526 551 1.306226 GCCTGGAGGTGGTAGGAGT 60.306 63.158 0.00 0.00 37.57 3.85
527 552 1.306141 TGCCTGGAGGTGGTAGGAG 60.306 63.158 0.00 0.00 37.57 3.69
528 553 1.306141 CTGCCTGGAGGTGGTAGGA 60.306 63.158 0.00 0.00 37.57 2.94
529 554 3.036429 GCTGCCTGGAGGTGGTAGG 62.036 68.421 0.00 0.00 37.69 3.18
530 555 2.586792 GCTGCCTGGAGGTGGTAG 59.413 66.667 0.00 0.00 39.75 3.18
531 556 3.390521 CGCTGCCTGGAGGTGGTA 61.391 66.667 0.00 0.00 37.57 3.25
534 559 3.699894 ACTCGCTGCCTGGAGGTG 61.700 66.667 0.00 0.00 37.57 4.00
535 560 3.699894 CACTCGCTGCCTGGAGGT 61.700 66.667 0.00 0.00 37.57 3.85
536 561 4.463879 CCACTCGCTGCCTGGAGG 62.464 72.222 0.00 0.00 34.58 4.30
537 562 3.368190 CTCCACTCGCTGCCTGGAG 62.368 68.421 16.77 16.77 43.98 3.86
547 572 0.600557 AGCTCACTTGACTCCACTCG 59.399 55.000 0.00 0.00 0.00 4.18
557 587 2.719798 CAACCAAAACGAGCTCACTTG 58.280 47.619 15.40 12.68 0.00 3.16
558 588 1.065551 GCAACCAAAACGAGCTCACTT 59.934 47.619 15.40 2.78 0.00 3.16
568 598 0.313987 CCGGAGAAGGCAACCAAAAC 59.686 55.000 0.00 0.00 37.17 2.43
973 1003 1.543802 AGAGTGAGTGAAAGCGAGAGG 59.456 52.381 0.00 0.00 0.00 3.69
974 1004 2.227626 TGAGAGTGAGTGAAAGCGAGAG 59.772 50.000 0.00 0.00 0.00 3.20
975 1005 2.227626 CTGAGAGTGAGTGAAAGCGAGA 59.772 50.000 0.00 0.00 0.00 4.04
976 1006 2.594321 CTGAGAGTGAGTGAAAGCGAG 58.406 52.381 0.00 0.00 0.00 5.03
977 1007 1.336332 GCTGAGAGTGAGTGAAAGCGA 60.336 52.381 0.00 0.00 0.00 4.93
978 1008 1.066914 GCTGAGAGTGAGTGAAAGCG 58.933 55.000 0.00 0.00 0.00 4.68
979 1009 1.001860 AGGCTGAGAGTGAGTGAAAGC 59.998 52.381 0.00 0.00 0.00 3.51
980 1010 2.298446 TCAGGCTGAGAGTGAGTGAAAG 59.702 50.000 14.43 0.00 0.00 2.62
981 1011 2.319844 TCAGGCTGAGAGTGAGTGAAA 58.680 47.619 14.43 0.00 0.00 2.69
982 1012 2.001076 TCAGGCTGAGAGTGAGTGAA 57.999 50.000 14.43 0.00 0.00 3.18
983 1013 1.891811 CTTCAGGCTGAGAGTGAGTGA 59.108 52.381 17.91 0.00 0.00 3.41
984 1014 1.067000 CCTTCAGGCTGAGAGTGAGTG 60.067 57.143 17.91 2.80 0.00 3.51
985 1015 1.265236 CCTTCAGGCTGAGAGTGAGT 58.735 55.000 17.91 0.00 0.00 3.41
986 1016 0.536260 CCCTTCAGGCTGAGAGTGAG 59.464 60.000 17.91 11.48 0.00 3.51
987 1017 2.676232 CCCTTCAGGCTGAGAGTGA 58.324 57.895 17.91 1.11 0.00 3.41
1005 1035 2.105466 CAGGCCTTCAAGAGCGAGC 61.105 63.158 0.00 0.00 0.00 5.03
1006 1036 1.449246 CCAGGCCTTCAAGAGCGAG 60.449 63.158 0.00 0.00 0.00 5.03
1323 1358 3.393970 CCTCCTCCTGCTTCGCCA 61.394 66.667 0.00 0.00 0.00 5.69
1425 1473 0.668401 GTGCAGCAAGACCAATTGGC 60.668 55.000 24.79 16.52 39.32 4.52
1433 1481 3.558505 CATTTACAGTGTGCAGCAAGAC 58.441 45.455 5.88 0.00 0.00 3.01
1460 1508 7.496529 ACACAAATTCGAAGAGAAGAATGAA 57.503 32.000 3.35 0.00 42.92 2.57
1480 1528 3.692101 ACCACTTGAAACAATCGAACACA 59.308 39.130 0.00 0.00 0.00 3.72
1483 1531 3.066203 ACCACCACTTGAAACAATCGAAC 59.934 43.478 0.00 0.00 0.00 3.95
1486 1534 3.364964 GCTACCACCACTTGAAACAATCG 60.365 47.826 0.00 0.00 0.00 3.34
1489 1537 3.290948 AGCTACCACCACTTGAAACAA 57.709 42.857 0.00 0.00 0.00 2.83
1491 1539 2.742589 GCTAGCTACCACCACTTGAAAC 59.257 50.000 7.70 0.00 0.00 2.78
1498 1546 2.093447 AGACATTGCTAGCTACCACCAC 60.093 50.000 17.23 0.46 0.00 4.16
1499 1547 2.187958 AGACATTGCTAGCTACCACCA 58.812 47.619 17.23 0.00 0.00 4.17
1500 1548 2.990066 AGACATTGCTAGCTACCACC 57.010 50.000 17.23 1.08 0.00 4.61
1524 1572 3.118519 GGAGGCTCCAAATACGGAACTAA 60.119 47.826 28.55 0.00 36.28 2.24
1525 1573 2.433239 GGAGGCTCCAAATACGGAACTA 59.567 50.000 28.55 0.00 36.28 2.24
1576 1625 1.428448 TCAGCACACACATTACGAGC 58.572 50.000 0.00 0.00 0.00 5.03
1582 1631 4.521639 AGTCATCAAATCAGCACACACATT 59.478 37.500 0.00 0.00 0.00 2.71
1619 1668 0.318120 CCCAGTTTCGCTTGCCATTT 59.682 50.000 0.00 0.00 0.00 2.32
1627 1676 0.883833 CAAATCAGCCCAGTTTCGCT 59.116 50.000 0.00 0.00 35.10 4.93
1635 1684 4.527427 TCAATCAAACATCAAATCAGCCCA 59.473 37.500 0.00 0.00 0.00 5.36
1684 1733 2.739932 GCATGAGACACGGCAGATACTT 60.740 50.000 0.00 0.00 0.00 2.24
1686 1735 1.212616 GCATGAGACACGGCAGATAC 58.787 55.000 0.00 0.00 0.00 2.24
1690 1739 0.741927 TCATGCATGAGACACGGCAG 60.742 55.000 25.42 0.00 39.95 4.85
1711 1760 9.417561 AGTACATGTATGTGTGTATAAGTACCT 57.582 33.333 9.18 0.00 41.89 3.08
1718 1767 8.747538 AGTGAGAGTACATGTATGTGTGTATA 57.252 34.615 9.18 0.00 41.89 1.47
1732 1781 3.329814 TCCTGGTAGTGAGTGAGAGTACA 59.670 47.826 0.00 0.00 0.00 2.90
1745 1802 5.706447 TGATATGCTCTTACTCCTGGTAGT 58.294 41.667 0.00 0.00 0.00 2.73
1746 1803 6.656632 TTGATATGCTCTTACTCCTGGTAG 57.343 41.667 0.00 0.00 0.00 3.18
1747 1804 5.011125 GCTTGATATGCTCTTACTCCTGGTA 59.989 44.000 0.00 0.00 0.00 3.25
1748 1805 4.202305 GCTTGATATGCTCTTACTCCTGGT 60.202 45.833 0.00 0.00 0.00 4.00
1749 1806 4.314121 GCTTGATATGCTCTTACTCCTGG 58.686 47.826 0.00 0.00 0.00 4.45
1750 1807 4.314121 GGCTTGATATGCTCTTACTCCTG 58.686 47.826 0.00 0.00 0.00 3.86
1751 1808 3.006323 CGGCTTGATATGCTCTTACTCCT 59.994 47.826 0.00 0.00 0.00 3.69
1752 1809 3.321497 CGGCTTGATATGCTCTTACTCC 58.679 50.000 0.00 0.00 0.00 3.85
1753 1810 2.734079 GCGGCTTGATATGCTCTTACTC 59.266 50.000 0.00 0.00 0.00 2.59
1754 1811 2.103094 TGCGGCTTGATATGCTCTTACT 59.897 45.455 0.00 0.00 0.00 2.24
1755 1812 2.483876 TGCGGCTTGATATGCTCTTAC 58.516 47.619 0.00 0.00 0.00 2.34
1756 1813 2.908688 TGCGGCTTGATATGCTCTTA 57.091 45.000 0.00 0.00 0.00 2.10
1757 1814 1.945394 CTTGCGGCTTGATATGCTCTT 59.055 47.619 0.00 0.00 0.00 2.85
1758 1815 1.134280 ACTTGCGGCTTGATATGCTCT 60.134 47.619 0.00 0.00 0.00 4.09
1759 1816 1.303309 ACTTGCGGCTTGATATGCTC 58.697 50.000 0.00 0.00 0.00 4.26
1760 1817 1.402968 CAACTTGCGGCTTGATATGCT 59.597 47.619 0.00 0.00 0.00 3.79
1761 1818 1.831343 CAACTTGCGGCTTGATATGC 58.169 50.000 0.00 0.00 0.00 3.14
1762 1819 1.831343 GCAACTTGCGGCTTGATATG 58.169 50.000 0.00 0.00 31.71 1.78
1788 1845 2.669240 GCTGGCGTTTAGGGGTCT 59.331 61.111 0.00 0.00 0.00 3.85
1806 1863 3.499737 CTGTGGACGGGCGCATTC 61.500 66.667 10.83 0.96 0.00 2.67
1815 1872 2.390599 CGGTCAATGCCTGTGGACG 61.391 63.158 0.00 0.00 0.00 4.79
1816 1873 2.040544 CCGGTCAATGCCTGTGGAC 61.041 63.158 0.00 0.00 0.00 4.02
1817 1874 2.350895 CCGGTCAATGCCTGTGGA 59.649 61.111 0.00 0.00 0.00 4.02
1818 1875 2.034066 ACCGGTCAATGCCTGTGG 59.966 61.111 0.00 0.00 0.00 4.17
1819 1876 1.302431 TGACCGGTCAATGCCTGTG 60.302 57.895 34.60 0.00 36.53 3.66
1820 1877 1.302511 GTGACCGGTCAATGCCTGT 60.303 57.895 37.75 0.00 41.85 4.00
1822 1879 0.392998 GATGTGACCGGTCAATGCCT 60.393 55.000 37.75 18.94 41.85 4.75
1823 1880 0.392998 AGATGTGACCGGTCAATGCC 60.393 55.000 37.75 25.16 41.85 4.40
1824 1881 2.309528 TAGATGTGACCGGTCAATGC 57.690 50.000 37.75 26.89 41.85 3.56
1827 1884 6.442952 CAAATTTTTAGATGTGACCGGTCAA 58.557 36.000 37.75 26.42 41.85 3.18
1830 1887 4.522789 AGCAAATTTTTAGATGTGACCGGT 59.477 37.500 6.92 6.92 0.00 5.28
1831 1888 5.059404 AGCAAATTTTTAGATGTGACCGG 57.941 39.130 0.00 0.00 0.00 5.28
1859 1916 8.107095 AGGTTTGCTAATTAAGATGTCTGGTTA 58.893 33.333 0.00 0.00 0.00 2.85
1861 1918 6.485171 AGGTTTGCTAATTAAGATGTCTGGT 58.515 36.000 0.00 0.00 0.00 4.00
1862 1919 6.599244 TGAGGTTTGCTAATTAAGATGTCTGG 59.401 38.462 0.00 0.00 0.00 3.86
1864 1921 8.635765 TTTGAGGTTTGCTAATTAAGATGTCT 57.364 30.769 0.00 0.00 0.00 3.41
1886 1943 6.266203 TCACGTTGCATGTTTTTGTATTTG 57.734 33.333 0.00 0.00 0.00 2.32
1891 1948 2.596419 CGTTCACGTTGCATGTTTTTGT 59.404 40.909 0.00 0.00 34.11 2.83
1896 1995 1.018148 TTCCGTTCACGTTGCATGTT 58.982 45.000 0.00 0.00 37.74 2.71
1913 2012 4.258860 CGAAAGAAGTTGTTGCAACGTTTC 60.259 41.667 23.79 23.06 0.00 2.78
1919 2018 6.371809 AATAGTCGAAAGAAGTTGTTGCAA 57.628 33.333 0.00 0.00 45.01 4.08
1922 2021 7.384115 TGAGGTAATAGTCGAAAGAAGTTGTTG 59.616 37.037 0.00 0.00 45.01 3.33
1925 2024 7.813148 TCTTGAGGTAATAGTCGAAAGAAGTTG 59.187 37.037 0.00 0.00 45.01 3.16
1927 2026 7.039923 TGTCTTGAGGTAATAGTCGAAAGAAGT 60.040 37.037 0.00 0.00 45.01 3.01
1928 2027 7.313646 TGTCTTGAGGTAATAGTCGAAAGAAG 58.686 38.462 0.00 0.00 45.01 2.85
1929 2028 7.223260 TGTCTTGAGGTAATAGTCGAAAGAA 57.777 36.000 0.00 0.00 45.01 2.52
1930 2029 6.829229 TGTCTTGAGGTAATAGTCGAAAGA 57.171 37.500 0.00 0.00 38.16 2.52
1931 2030 6.019479 GCATGTCTTGAGGTAATAGTCGAAAG 60.019 42.308 0.00 0.00 0.00 2.62
1932 2031 5.810587 GCATGTCTTGAGGTAATAGTCGAAA 59.189 40.000 0.00 0.00 0.00 3.46
1933 2032 5.348986 GCATGTCTTGAGGTAATAGTCGAA 58.651 41.667 0.00 0.00 0.00 3.71
1934 2033 4.202121 GGCATGTCTTGAGGTAATAGTCGA 60.202 45.833 0.00 0.00 0.00 4.20
1935 2034 4.051922 GGCATGTCTTGAGGTAATAGTCG 58.948 47.826 0.00 0.00 0.00 4.18
1936 2035 5.023533 TGGCATGTCTTGAGGTAATAGTC 57.976 43.478 0.00 0.00 0.00 2.59
1937 2036 5.615289 GATGGCATGTCTTGAGGTAATAGT 58.385 41.667 3.81 0.00 0.00 2.12
1938 2037 4.687948 CGATGGCATGTCTTGAGGTAATAG 59.312 45.833 3.81 0.00 0.00 1.73
1939 2038 4.503123 CCGATGGCATGTCTTGAGGTAATA 60.503 45.833 3.81 0.00 0.00 0.98
1940 2039 3.470709 CGATGGCATGTCTTGAGGTAAT 58.529 45.455 3.81 0.00 0.00 1.89
1941 2040 2.419990 CCGATGGCATGTCTTGAGGTAA 60.420 50.000 3.81 0.00 0.00 2.85
1942 2041 1.138859 CCGATGGCATGTCTTGAGGTA 59.861 52.381 3.81 0.00 0.00 3.08
1943 2042 0.107508 CCGATGGCATGTCTTGAGGT 60.108 55.000 3.81 0.00 0.00 3.85
1944 2043 0.178767 TCCGATGGCATGTCTTGAGG 59.821 55.000 3.81 0.00 0.00 3.86
1945 2044 1.134580 AGTCCGATGGCATGTCTTGAG 60.135 52.381 3.81 0.00 0.00 3.02
1946 2045 0.904649 AGTCCGATGGCATGTCTTGA 59.095 50.000 3.81 0.00 0.00 3.02
1947 2046 1.134580 AGAGTCCGATGGCATGTCTTG 60.135 52.381 3.81 0.00 0.00 3.02
1948 2047 1.137872 GAGAGTCCGATGGCATGTCTT 59.862 52.381 3.81 0.00 0.00 3.01
1949 2048 0.749649 GAGAGTCCGATGGCATGTCT 59.250 55.000 3.81 0.00 0.00 3.41
1950 2049 0.461548 TGAGAGTCCGATGGCATGTC 59.538 55.000 3.81 0.00 0.00 3.06
1951 2050 0.904649 TTGAGAGTCCGATGGCATGT 59.095 50.000 3.81 0.00 0.00 3.21
1952 2051 2.028420 TTTGAGAGTCCGATGGCATG 57.972 50.000 3.81 0.00 0.00 4.06
1953 2052 2.787473 TTTTGAGAGTCCGATGGCAT 57.213 45.000 0.00 0.00 0.00 4.40
1954 2053 2.787473 ATTTTGAGAGTCCGATGGCA 57.213 45.000 0.00 0.00 0.00 4.92
1955 2054 3.440173 TCAAATTTTGAGAGTCCGATGGC 59.560 43.478 7.74 0.00 34.08 4.40
1956 2055 4.455533 TGTCAAATTTTGAGAGTCCGATGG 59.544 41.667 12.02 0.00 41.01 3.51
1957 2056 5.611796 TGTCAAATTTTGAGAGTCCGATG 57.388 39.130 12.02 0.00 41.01 3.84
1963 2062 9.071276 AGATGTAACATGTCAAATTTTGAGAGT 57.929 29.630 12.02 8.29 41.01 3.24
1990 2089 5.439721 TGATTTTCTGCATAGCCAGTATGT 58.560 37.500 0.00 0.00 40.80 2.29
1992 2091 5.709164 GGATGATTTTCTGCATAGCCAGTAT 59.291 40.000 0.00 0.00 34.47 2.12
1997 2096 4.379186 CGATGGATGATTTTCTGCATAGCC 60.379 45.833 0.00 0.00 0.00 3.93
2004 2103 4.337555 AGGAAAGCGATGGATGATTTTCTG 59.662 41.667 0.00 0.00 0.00 3.02
2009 2108 2.360165 GCAAGGAAAGCGATGGATGATT 59.640 45.455 0.00 0.00 0.00 2.57
2019 2118 2.343426 GGGAAGGGCAAGGAAAGCG 61.343 63.158 0.00 0.00 0.00 4.68
2020 2119 2.343426 CGGGAAGGGCAAGGAAAGC 61.343 63.158 0.00 0.00 0.00 3.51
2021 2120 0.960861 GTCGGGAAGGGCAAGGAAAG 60.961 60.000 0.00 0.00 0.00 2.62
2023 2122 2.150719 TGTCGGGAAGGGCAAGGAA 61.151 57.895 0.00 0.00 0.00 3.36
2038 2137 2.062519 GAGAAGAACGGCAAGAGTGTC 58.937 52.381 0.00 0.00 0.00 3.67
2039 2138 1.412710 TGAGAAGAACGGCAAGAGTGT 59.587 47.619 0.00 0.00 0.00 3.55
2041 2140 1.603172 CGTGAGAAGAACGGCAAGAGT 60.603 52.381 0.00 0.00 37.39 3.24
2043 2142 3.195041 CGTGAGAAGAACGGCAAGA 57.805 52.632 0.00 0.00 37.39 3.02
2059 2158 1.529865 GTTTTTGAGCGCTACTTCCGT 59.470 47.619 11.50 0.00 0.00 4.69
2074 2173 3.498018 GGCTGAATCCATTTTGCGTTTTT 59.502 39.130 0.00 0.00 0.00 1.94
2079 2178 0.526096 CCGGCTGAATCCATTTTGCG 60.526 55.000 0.00 0.00 0.00 4.85
2091 2190 2.755876 ACGAGCAGATCCGGCTGA 60.756 61.111 13.68 0.00 42.78 4.26
2110 2209 2.503546 GGGTAGCTCAGCTCAGGC 59.496 66.667 0.00 0.00 40.44 4.85
2111 2210 1.608717 AACGGGTAGCTCAGCTCAGG 61.609 60.000 0.00 0.00 40.44 3.86
2113 2212 1.591703 CAACGGGTAGCTCAGCTCA 59.408 57.895 0.00 0.00 40.44 4.26
2116 2215 2.103042 CAGCAACGGGTAGCTCAGC 61.103 63.158 0.00 0.00 39.50 4.26
2123 2222 1.001633 GAAAGAGGACAGCAACGGGTA 59.998 52.381 0.00 0.00 0.00 3.69
2127 2226 1.001406 AGGAGAAAGAGGACAGCAACG 59.999 52.381 0.00 0.00 0.00 4.10
2128 2227 2.614229 GGAGGAGAAAGAGGACAGCAAC 60.614 54.545 0.00 0.00 0.00 4.17
2129 2228 1.625818 GGAGGAGAAAGAGGACAGCAA 59.374 52.381 0.00 0.00 0.00 3.91
2130 2229 1.203237 AGGAGGAGAAAGAGGACAGCA 60.203 52.381 0.00 0.00 0.00 4.41
2131 2230 1.567357 AGGAGGAGAAAGAGGACAGC 58.433 55.000 0.00 0.00 0.00 4.40
2431 2530 0.729140 GCAAAATTCGGCGGTCTGTG 60.729 55.000 7.21 1.53 0.00 3.66
2432 2531 0.889186 AGCAAAATTCGGCGGTCTGT 60.889 50.000 7.21 0.00 34.54 3.41
2433 2532 0.179189 GAGCAAAATTCGGCGGTCTG 60.179 55.000 7.21 0.00 34.54 3.51
2434 2533 1.305930 GGAGCAAAATTCGGCGGTCT 61.306 55.000 7.21 0.00 34.54 3.85
2435 2534 1.136774 GGAGCAAAATTCGGCGGTC 59.863 57.895 7.21 0.00 34.54 4.79
2436 2535 2.340328 GGGAGCAAAATTCGGCGGT 61.340 57.895 7.21 0.00 34.54 5.68
2437 2536 2.489751 GGGAGCAAAATTCGGCGG 59.510 61.111 7.21 0.00 34.54 6.13
2438 2537 2.100216 CGGGAGCAAAATTCGGCG 59.900 61.111 0.00 0.00 34.54 6.46
2439 2538 2.489751 CCGGGAGCAAAATTCGGC 59.510 61.111 0.00 0.00 34.17 5.54
2440 2539 3.063743 GCCCGGGAGCAAAATTCGG 62.064 63.158 29.31 0.00 40.32 4.30
2441 2540 2.489751 GCCCGGGAGCAAAATTCG 59.510 61.111 29.31 0.00 0.00 3.34
2442 2541 1.993369 CTCGCCCGGGAGCAAAATTC 61.993 60.000 29.31 0.79 0.00 2.17
2443 2542 2.034999 TCGCCCGGGAGCAAAATT 59.965 55.556 29.31 0.00 0.00 1.82
2444 2543 2.438434 CTCGCCCGGGAGCAAAAT 60.438 61.111 29.31 0.00 0.00 1.82
2445 2544 4.715523 CCTCGCCCGGGAGCAAAA 62.716 66.667 29.31 3.36 32.57 2.44
2458 2557 4.728102 TAACACGCGTGCCCCTCG 62.728 66.667 37.35 14.17 0.00 4.63
2459 2558 3.116531 GTAACACGCGTGCCCCTC 61.117 66.667 37.35 19.59 0.00 4.30
2460 2559 4.692475 GGTAACACGCGTGCCCCT 62.692 66.667 37.35 21.68 0.00 4.79
2461 2560 4.692475 AGGTAACACGCGTGCCCC 62.692 66.667 37.35 30.90 41.41 5.80
2462 2561 3.116531 GAGGTAACACGCGTGCCC 61.117 66.667 37.35 31.24 41.41 5.36
2463 2562 3.475774 CGAGGTAACACGCGTGCC 61.476 66.667 37.35 29.10 45.32 5.01
2480 2579 1.009829 CATCCTGAAGTAGCGGCAAC 58.990 55.000 1.45 0.00 0.00 4.17
2481 2580 0.744414 GCATCCTGAAGTAGCGGCAA 60.744 55.000 1.45 0.00 0.00 4.52
2482 2581 1.153369 GCATCCTGAAGTAGCGGCA 60.153 57.895 1.45 0.00 0.00 5.69
2483 2582 2.240500 CGCATCCTGAAGTAGCGGC 61.241 63.158 0.00 0.00 44.20 6.53
2484 2583 4.018609 CGCATCCTGAAGTAGCGG 57.981 61.111 0.00 0.00 44.20 5.52
2486 2585 1.889573 GCCCGCATCCTGAAGTAGC 60.890 63.158 0.00 0.00 0.00 3.58
2487 2586 0.811616 GTGCCCGCATCCTGAAGTAG 60.812 60.000 0.00 0.00 0.00 2.57
2488 2587 1.220749 GTGCCCGCATCCTGAAGTA 59.779 57.895 0.00 0.00 0.00 2.24
2489 2588 2.045926 GTGCCCGCATCCTGAAGT 60.046 61.111 0.00 0.00 0.00 3.01
2490 2589 1.243342 TTTGTGCCCGCATCCTGAAG 61.243 55.000 0.00 0.00 0.00 3.02
2491 2590 0.611618 ATTTGTGCCCGCATCCTGAA 60.612 50.000 0.00 0.00 0.00 3.02
2492 2591 1.001020 ATTTGTGCCCGCATCCTGA 60.001 52.632 0.00 0.00 0.00 3.86
2493 2592 1.140161 CATTTGTGCCCGCATCCTG 59.860 57.895 0.00 0.00 0.00 3.86
2494 2593 1.001020 TCATTTGTGCCCGCATCCT 60.001 52.632 0.00 0.00 0.00 3.24
2495 2594 1.139520 GTCATTTGTGCCCGCATCC 59.860 57.895 0.00 0.00 0.00 3.51
2496 2595 0.527565 AAGTCATTTGTGCCCGCATC 59.472 50.000 0.00 0.00 0.00 3.91
2497 2596 0.527565 GAAGTCATTTGTGCCCGCAT 59.472 50.000 0.00 0.00 0.00 4.73
2498 2597 1.523154 GGAAGTCATTTGTGCCCGCA 61.523 55.000 0.00 0.00 0.00 5.69
2499 2598 1.212751 GGAAGTCATTTGTGCCCGC 59.787 57.895 0.00 0.00 0.00 6.13
2500 2599 0.804989 GAGGAAGTCATTTGTGCCCG 59.195 55.000 0.00 0.00 0.00 6.13
2501 2600 1.177401 GGAGGAAGTCATTTGTGCCC 58.823 55.000 0.00 0.00 0.00 5.36
2502 2601 2.087646 GAGGAGGAAGTCATTTGTGCC 58.912 52.381 0.00 0.00 0.00 5.01
2503 2602 2.087646 GGAGGAGGAAGTCATTTGTGC 58.912 52.381 0.00 0.00 0.00 4.57
2504 2603 3.423539 TGGAGGAGGAAGTCATTTGTG 57.576 47.619 0.00 0.00 0.00 3.33
2505 2604 4.785376 ACTATGGAGGAGGAAGTCATTTGT 59.215 41.667 0.00 0.00 0.00 2.83
2506 2605 5.365021 ACTATGGAGGAGGAAGTCATTTG 57.635 43.478 0.00 0.00 0.00 2.32
2507 2606 5.071115 GCTACTATGGAGGAGGAAGTCATTT 59.929 44.000 0.00 0.00 33.66 2.32
2508 2607 4.591072 GCTACTATGGAGGAGGAAGTCATT 59.409 45.833 0.00 0.00 33.66 2.57
2509 2608 4.156477 GCTACTATGGAGGAGGAAGTCAT 58.844 47.826 0.00 0.00 33.66 3.06
2510 2609 3.567397 GCTACTATGGAGGAGGAAGTCA 58.433 50.000 0.00 0.00 33.66 3.41
2511 2610 2.554893 CGCTACTATGGAGGAGGAAGTC 59.445 54.545 0.00 0.00 33.66 3.01
2512 2611 2.588620 CGCTACTATGGAGGAGGAAGT 58.411 52.381 0.00 0.00 33.66 3.01
2513 2612 1.271102 GCGCTACTATGGAGGAGGAAG 59.729 57.143 0.00 0.00 33.66 3.46
2514 2613 1.329256 GCGCTACTATGGAGGAGGAA 58.671 55.000 0.00 0.00 33.66 3.36
2515 2614 0.889638 CGCGCTACTATGGAGGAGGA 60.890 60.000 5.56 0.00 33.66 3.71
2516 2615 1.581954 CGCGCTACTATGGAGGAGG 59.418 63.158 5.56 0.00 33.66 4.30
2517 2616 1.081108 GCGCGCTACTATGGAGGAG 60.081 63.158 26.67 0.00 36.60 3.69
2518 2617 2.904676 CGCGCGCTACTATGGAGGA 61.905 63.158 30.48 0.00 0.00 3.71
2519 2618 2.429236 CGCGCGCTACTATGGAGG 60.429 66.667 30.48 5.07 0.00 4.30
2520 2619 3.100191 GCGCGCGCTACTATGGAG 61.100 66.667 44.38 11.16 38.26 3.86
2536 2635 3.799755 GTCAACGGATGCGGTGGC 61.800 66.667 24.91 20.37 40.52 5.01
2537 2636 2.047274 AGTCAACGGATGCGGTGG 60.047 61.111 24.91 6.29 0.00 4.61
2538 2637 2.100631 GGAGTCAACGGATGCGGTG 61.101 63.158 19.62 19.62 0.00 4.94
2539 2638 2.264794 GGAGTCAACGGATGCGGT 59.735 61.111 12.44 0.00 0.00 5.68
2540 2639 2.885644 CGGAGTCAACGGATGCGG 60.886 66.667 12.44 0.00 0.00 5.69
2541 2640 3.554692 GCGGAGTCAACGGATGCG 61.555 66.667 4.58 4.58 0.00 4.73
2542 2641 3.195698 GGCGGAGTCAACGGATGC 61.196 66.667 0.00 0.00 0.00 3.91
2543 2642 2.885644 CGGCGGAGTCAACGGATG 60.886 66.667 0.00 0.00 0.00 3.51
2544 2643 4.814294 GCGGCGGAGTCAACGGAT 62.814 66.667 9.78 0.00 0.00 4.18
2564 2663 4.457496 ACCTCGCTGCCGACATGG 62.457 66.667 0.00 0.00 38.82 3.66
2565 2664 3.190849 CACCTCGCTGCCGACATG 61.191 66.667 0.00 0.00 38.82 3.21
2566 2665 3.695606 ACACCTCGCTGCCGACAT 61.696 61.111 0.00 0.00 38.82 3.06
2567 2666 4.662961 CACACCTCGCTGCCGACA 62.663 66.667 0.00 0.00 38.82 4.35
2580 2679 2.741486 TAAGGTTGGCCGAGGCACAC 62.741 60.000 16.65 10.95 44.11 3.82
2581 2680 1.847798 ATAAGGTTGGCCGAGGCACA 61.848 55.000 16.65 8.67 44.11 4.57
2582 2681 1.077716 ATAAGGTTGGCCGAGGCAC 60.078 57.895 16.65 6.25 44.11 5.01
2583 2682 1.223487 GATAAGGTTGGCCGAGGCA 59.777 57.895 16.65 0.00 44.11 4.75
2584 2683 1.526225 GGATAAGGTTGGCCGAGGC 60.526 63.158 5.37 5.37 40.50 4.70
2585 2684 0.106894 GAGGATAAGGTTGGCCGAGG 59.893 60.000 0.00 0.00 40.50 4.63
2586 2685 1.069358 GAGAGGATAAGGTTGGCCGAG 59.931 57.143 0.00 0.00 40.50 4.63
2587 2686 1.120530 GAGAGGATAAGGTTGGCCGA 58.879 55.000 0.00 0.00 40.50 5.54
2588 2687 0.106894 GGAGAGGATAAGGTTGGCCG 59.893 60.000 0.00 0.00 40.50 6.13
2589 2688 1.512735 AGGAGAGGATAAGGTTGGCC 58.487 55.000 0.00 0.00 0.00 5.36
2590 2689 2.924421 CAAGGAGAGGATAAGGTTGGC 58.076 52.381 0.00 0.00 0.00 4.52
2591 2690 2.507471 AGCAAGGAGAGGATAAGGTTGG 59.493 50.000 0.00 0.00 0.00 3.77
2592 2691 3.922171 AGCAAGGAGAGGATAAGGTTG 57.078 47.619 0.00 0.00 0.00 3.77
2593 2692 3.389656 GCTAGCAAGGAGAGGATAAGGTT 59.610 47.826 10.63 0.00 0.00 3.50
2594 2693 2.969262 GCTAGCAAGGAGAGGATAAGGT 59.031 50.000 10.63 0.00 0.00 3.50
2595 2694 2.301583 GGCTAGCAAGGAGAGGATAAGG 59.698 54.545 18.24 0.00 0.00 2.69
2596 2695 2.968574 TGGCTAGCAAGGAGAGGATAAG 59.031 50.000 18.24 0.00 0.00 1.73
2597 2696 2.968574 CTGGCTAGCAAGGAGAGGATAA 59.031 50.000 18.24 0.00 0.00 1.75
2598 2697 2.603021 CTGGCTAGCAAGGAGAGGATA 58.397 52.381 18.24 0.00 0.00 2.59
2599 2698 1.422531 CTGGCTAGCAAGGAGAGGAT 58.577 55.000 18.24 0.00 0.00 3.24
2600 2699 0.689080 CCTGGCTAGCAAGGAGAGGA 60.689 60.000 31.81 0.00 39.54 3.71
2601 2700 1.828768 CCTGGCTAGCAAGGAGAGG 59.171 63.158 31.81 13.87 39.54 3.69
2602 2701 1.145819 GCCTGGCTAGCAAGGAGAG 59.854 63.158 38.00 14.87 39.54 3.20
2603 2702 2.370445 GGCCTGGCTAGCAAGGAGA 61.370 63.158 38.00 4.14 39.54 3.71
2604 2703 2.191641 GGCCTGGCTAGCAAGGAG 59.808 66.667 38.00 15.95 39.54 3.69
2605 2704 3.785859 CGGCCTGGCTAGCAAGGA 61.786 66.667 38.00 8.48 39.54 3.36
2606 2705 4.101448 ACGGCCTGGCTAGCAAGG 62.101 66.667 31.20 31.20 40.15 3.61
2607 2706 2.238847 TACACGGCCTGGCTAGCAAG 62.239 60.000 19.68 15.40 0.00 4.01
2608 2707 2.238847 CTACACGGCCTGGCTAGCAA 62.239 60.000 19.68 3.74 0.00 3.91
2609 2708 2.682136 TACACGGCCTGGCTAGCA 60.682 61.111 19.68 1.68 0.00 3.49
2610 2709 2.107141 CTACACGGCCTGGCTAGC 59.893 66.667 19.68 6.04 0.00 3.42
2611 2710 1.756950 TCCTACACGGCCTGGCTAG 60.757 63.158 19.68 15.22 0.00 3.42
2612 2711 2.056223 GTCCTACACGGCCTGGCTA 61.056 63.158 19.68 1.65 0.00 3.93
2613 2712 3.391382 GTCCTACACGGCCTGGCT 61.391 66.667 19.68 0.28 0.00 4.75
2614 2713 3.372554 GAGTCCTACACGGCCTGGC 62.373 68.421 11.05 11.05 0.00 4.85
2615 2714 1.330655 ATGAGTCCTACACGGCCTGG 61.331 60.000 0.00 0.00 0.00 4.45
2616 2715 1.067212 GTATGAGTCCTACACGGCCTG 59.933 57.143 0.00 0.21 0.00 4.85
2617 2716 1.063867 AGTATGAGTCCTACACGGCCT 60.064 52.381 0.00 0.00 0.00 5.19
2618 2717 1.337387 GAGTATGAGTCCTACACGGCC 59.663 57.143 8.11 0.00 0.00 6.13
2619 2718 1.337387 GGAGTATGAGTCCTACACGGC 59.663 57.143 8.11 0.00 34.81 5.68
2620 2719 1.602851 CGGAGTATGAGTCCTACACGG 59.397 57.143 8.11 3.10 35.52 4.94
2621 2720 1.602851 CCGGAGTATGAGTCCTACACG 59.397 57.143 0.00 10.60 35.52 4.49
2622 2721 1.337387 GCCGGAGTATGAGTCCTACAC 59.663 57.143 5.05 2.10 35.52 2.90
2623 2722 1.688772 GCCGGAGTATGAGTCCTACA 58.311 55.000 5.05 0.00 35.52 2.74
2624 2723 0.592148 CGCCGGAGTATGAGTCCTAC 59.408 60.000 5.05 0.00 35.52 3.18
2625 2724 0.536687 CCGCCGGAGTATGAGTCCTA 60.537 60.000 5.05 0.00 35.52 2.94
2626 2725 1.828660 CCGCCGGAGTATGAGTCCT 60.829 63.158 5.05 0.00 35.52 3.85
2627 2726 1.826921 TCCGCCGGAGTATGAGTCC 60.827 63.158 5.05 0.00 34.30 3.85
2628 2727 1.359475 GTCCGCCGGAGTATGAGTC 59.641 63.158 5.82 0.00 29.39 3.36
2629 2728 2.125961 GGTCCGCCGGAGTATGAGT 61.126 63.158 5.82 0.00 29.39 3.41
2630 2729 2.728817 GGTCCGCCGGAGTATGAG 59.271 66.667 5.82 0.00 29.39 2.90
2640 2739 2.511600 CACCATCTTCGGTCCGCC 60.512 66.667 6.34 0.00 37.07 6.13
2641 2740 2.577059 TCACCATCTTCGGTCCGC 59.423 61.111 6.34 0.00 37.07 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.