Multiple sequence alignment - TraesCS3A01G391200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G391200 chr3A 100.000 2669 0 0 1 2669 639087964 639085296 0.000000e+00 4929.0
1 TraesCS3A01G391200 chr3A 92.046 1383 81 18 787 2157 639248354 639249719 0.000000e+00 1917.0
2 TraesCS3A01G391200 chr3A 91.935 62 5 0 2355 2416 346425942 346426003 1.320000e-13 87.9
3 TraesCS3A01G391200 chr3D 92.298 1662 80 11 1052 2669 499041580 499039923 0.000000e+00 2316.0
4 TraesCS3A01G391200 chr3D 95.694 1440 46 6 725 2148 499632734 499631295 0.000000e+00 2302.0
5 TraesCS3A01G391200 chr3D 92.095 1341 79 14 787 2118 499846242 499844920 0.000000e+00 1864.0
6 TraesCS3A01G391200 chr3D 90.541 148 11 1 1 145 499633093 499632946 2.710000e-45 193.0
7 TraesCS3A01G391200 chr3D 92.727 55 3 1 2171 2225 499040498 499040445 7.920000e-11 78.7
8 TraesCS3A01G391200 chr3B 96.073 1426 45 7 760 2175 660029360 660027936 0.000000e+00 2313.0
9 TraesCS3A01G391200 chr3B 94.542 1191 57 5 959 2147 660701384 660700200 0.000000e+00 1832.0
10 TraesCS3A01G391200 chr3B 93.134 670 32 7 707 1363 660381793 660381125 0.000000e+00 970.0
11 TraesCS3A01G391200 chr3B 82.830 530 55 10 2171 2669 660027977 660027453 2.440000e-120 442.0
12 TraesCS3A01G391200 chr3B 87.593 403 22 15 777 1176 660031129 660030752 2.440000e-120 442.0
13 TraesCS3A01G391200 chr3B 88.514 148 14 1 1 145 660382238 660382091 2.730000e-40 176.0
14 TraesCS3A01G391200 chr3B 93.137 102 5 2 223 324 660381923 660381824 5.950000e-32 148.0
15 TraesCS3A01G391200 chr3B 94.118 68 2 2 191 257 660029515 660029449 4.700000e-18 102.0
16 TraesCS3A01G391200 chr5B 93.357 1114 62 4 1065 2178 22094090 22092989 0.000000e+00 1637.0
17 TraesCS3A01G391200 chr5B 95.556 45 2 0 2570 2614 22092583 22092539 3.690000e-09 73.1
18 TraesCS3A01G391200 chr5A 95.480 531 24 0 1065 1595 6523551 6523021 0.000000e+00 848.0
19 TraesCS3A01G391200 chr5A 93.625 251 10 2 1632 1876 6523022 6522772 1.170000e-98 370.0
20 TraesCS3A01G391200 chr5A 83.333 138 20 3 2345 2481 507853970 507854105 1.000000e-24 124.0
21 TraesCS3A01G391200 chr4D 87.421 159 14 4 206 361 455475240 455475395 7.590000e-41 178.0
22 TraesCS3A01G391200 chr7A 83.594 128 19 2 2355 2481 58318018 58318144 4.670000e-23 119.0
23 TraesCS3A01G391200 chr2A 83.594 128 19 2 2355 2481 469878437 469878311 4.670000e-23 119.0
24 TraesCS3A01G391200 chr2A 82.812 128 20 2 2355 2481 640113296 640113422 2.170000e-21 113.0
25 TraesCS3A01G391200 chr2A 90.769 65 6 0 2355 2419 29446003 29446067 1.320000e-13 87.9
26 TraesCS3A01G391200 chr4A 82.812 128 20 2 2355 2481 663339119 663339245 2.170000e-21 113.0
27 TraesCS3A01G391200 chr5D 90.323 62 6 0 2355 2416 471424068 471424129 6.120000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G391200 chr3A 639085296 639087964 2668 True 4929.000000 4929 100.0000 1 2669 1 chr3A.!!$R1 2668
1 TraesCS3A01G391200 chr3A 639248354 639249719 1365 False 1917.000000 1917 92.0460 787 2157 1 chr3A.!!$F2 1370
2 TraesCS3A01G391200 chr3D 499844920 499846242 1322 True 1864.000000 1864 92.0950 787 2118 1 chr3D.!!$R1 1331
3 TraesCS3A01G391200 chr3D 499631295 499633093 1798 True 1247.500000 2302 93.1175 1 2148 2 chr3D.!!$R3 2147
4 TraesCS3A01G391200 chr3D 499039923 499041580 1657 True 1197.350000 2316 92.5125 1052 2669 2 chr3D.!!$R2 1617
5 TraesCS3A01G391200 chr3B 660700200 660701384 1184 True 1832.000000 1832 94.5420 959 2147 1 chr3B.!!$R1 1188
6 TraesCS3A01G391200 chr3B 660027453 660031129 3676 True 824.750000 2313 90.1535 191 2669 4 chr3B.!!$R2 2478
7 TraesCS3A01G391200 chr3B 660381125 660382238 1113 True 431.333333 970 91.5950 1 1363 3 chr3B.!!$R3 1362
8 TraesCS3A01G391200 chr5B 22092539 22094090 1551 True 855.050000 1637 94.4565 1065 2614 2 chr5B.!!$R1 1549
9 TraesCS3A01G391200 chr5A 6522772 6523551 779 True 609.000000 848 94.5525 1065 1876 2 chr5A.!!$R1 811

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
698 2173 0.037697 ACGCAGCACCATCTCGTTTA 60.038 50.0 0.0 0.0 0.0 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2242 3761 0.100325 TGCTTGCCAAACGTTGTGAG 59.9 50.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.029844 GCTGGTGTCTGAAGGTCGC 61.030 63.158 0.00 0.00 0.00 5.19
70 71 0.331616 AGATTAGCCCCGCCAAAAGT 59.668 50.000 0.00 0.00 0.00 2.66
76 77 1.530655 CCCCGCCAAAAGTCAGGTT 60.531 57.895 0.00 0.00 0.00 3.50
78 79 1.574428 CCGCCAAAAGTCAGGTTCG 59.426 57.895 0.00 0.00 0.00 3.95
79 80 1.574428 CGCCAAAAGTCAGGTTCGG 59.426 57.895 0.00 0.00 0.00 4.30
80 81 1.164041 CGCCAAAAGTCAGGTTCGGT 61.164 55.000 0.00 0.00 0.00 4.69
81 82 1.029681 GCCAAAAGTCAGGTTCGGTT 58.970 50.000 0.00 0.00 0.00 4.44
82 83 1.001706 GCCAAAAGTCAGGTTCGGTTC 60.002 52.381 0.00 0.00 0.00 3.62
83 84 2.294074 CCAAAAGTCAGGTTCGGTTCA 58.706 47.619 0.00 0.00 0.00 3.18
84 85 2.884639 CCAAAAGTCAGGTTCGGTTCAT 59.115 45.455 0.00 0.00 0.00 2.57
85 86 3.304659 CCAAAAGTCAGGTTCGGTTCATG 60.305 47.826 0.00 0.00 0.00 3.07
86 87 2.930826 AAGTCAGGTTCGGTTCATGT 57.069 45.000 0.00 0.00 0.00 3.21
87 88 4.345859 AAAGTCAGGTTCGGTTCATGTA 57.654 40.909 0.00 0.00 0.00 2.29
88 89 3.314541 AGTCAGGTTCGGTTCATGTAC 57.685 47.619 0.00 0.00 0.00 2.90
89 90 2.028385 AGTCAGGTTCGGTTCATGTACC 60.028 50.000 11.32 11.32 34.72 3.34
91 92 2.569853 TCAGGTTCGGTTCATGTACCAT 59.430 45.455 20.10 0.00 38.12 3.55
92 93 3.770388 TCAGGTTCGGTTCATGTACCATA 59.230 43.478 20.10 5.96 38.12 2.74
93 94 4.119862 CAGGTTCGGTTCATGTACCATAG 58.880 47.826 20.10 5.57 38.12 2.23
94 95 4.028131 AGGTTCGGTTCATGTACCATAGA 58.972 43.478 20.10 7.73 38.12 1.98
95 96 4.654262 AGGTTCGGTTCATGTACCATAGAT 59.346 41.667 20.10 1.67 38.12 1.98
96 97 5.130477 AGGTTCGGTTCATGTACCATAGATT 59.870 40.000 20.10 0.00 38.12 2.40
97 98 5.465724 GGTTCGGTTCATGTACCATAGATTC 59.534 44.000 20.10 7.02 38.12 2.52
98 99 4.866921 TCGGTTCATGTACCATAGATTCG 58.133 43.478 20.10 5.02 38.12 3.34
100 101 5.068067 TCGGTTCATGTACCATAGATTCGAA 59.932 40.000 20.10 0.00 38.12 3.71
102 103 6.423905 CGGTTCATGTACCATAGATTCGAATT 59.576 38.462 20.10 5.20 38.12 2.17
105 106 7.061566 TCATGTACCATAGATTCGAATTCCA 57.938 36.000 12.81 0.94 0.00 3.53
106 107 7.679783 TCATGTACCATAGATTCGAATTCCAT 58.320 34.615 12.81 3.37 0.00 3.41
107 108 8.156820 TCATGTACCATAGATTCGAATTCCATT 58.843 33.333 12.81 0.00 0.00 3.16
110 111 9.268268 TGTACCATAGATTCGAATTCCATTTAC 57.732 33.333 12.81 10.54 0.00 2.01
111 112 9.490379 GTACCATAGATTCGAATTCCATTTACT 57.510 33.333 12.81 4.62 0.00 2.24
112 113 8.980481 ACCATAGATTCGAATTCCATTTACTT 57.020 30.769 12.81 0.00 0.00 2.24
113 114 8.840321 ACCATAGATTCGAATTCCATTTACTTG 58.160 33.333 12.81 4.02 0.00 3.16
114 115 9.056005 CCATAGATTCGAATTCCATTTACTTGA 57.944 33.333 12.81 0.00 0.00 3.02
117 118 7.934457 AGATTCGAATTCCATTTACTTGATGG 58.066 34.615 12.81 0.00 44.39 3.51
118 119 5.499139 TCGAATTCCATTTACTTGATGGC 57.501 39.130 0.00 0.00 43.04 4.40
120 121 5.036737 CGAATTCCATTTACTTGATGGCAC 58.963 41.667 0.00 0.00 43.04 5.01
122 123 5.587388 ATTCCATTTACTTGATGGCACTG 57.413 39.130 0.00 0.00 43.04 3.66
123 124 4.032960 TCCATTTACTTGATGGCACTGT 57.967 40.909 0.00 0.00 43.04 3.55
124 125 4.009675 TCCATTTACTTGATGGCACTGTC 58.990 43.478 0.00 0.00 43.04 3.51
125 126 3.758023 CCATTTACTTGATGGCACTGTCA 59.242 43.478 0.00 0.00 37.81 3.58
126 127 4.218200 CCATTTACTTGATGGCACTGTCAA 59.782 41.667 2.36 2.36 37.81 3.18
127 128 5.278907 CCATTTACTTGATGGCACTGTCAAA 60.279 40.000 3.83 0.00 37.81 2.69
129 130 1.956477 ACTTGATGGCACTGTCAAACC 59.044 47.619 3.83 0.00 34.49 3.27
130 131 2.233271 CTTGATGGCACTGTCAAACCT 58.767 47.619 3.83 0.00 34.49 3.50
132 133 3.719268 TGATGGCACTGTCAAACCTAT 57.281 42.857 0.00 0.00 0.00 2.57
134 135 4.769688 TGATGGCACTGTCAAACCTATAG 58.230 43.478 0.00 0.00 0.00 1.31
136 137 5.130975 TGATGGCACTGTCAAACCTATAGAT 59.869 40.000 0.00 0.00 0.00 1.98
137 138 5.023533 TGGCACTGTCAAACCTATAGATC 57.976 43.478 0.00 0.00 0.00 2.75
140 141 5.053145 GCACTGTCAAACCTATAGATCCTG 58.947 45.833 0.00 0.00 0.00 3.86
141 142 5.395768 GCACTGTCAAACCTATAGATCCTGT 60.396 44.000 0.00 0.00 0.00 4.00
142 143 6.045318 CACTGTCAAACCTATAGATCCTGTG 58.955 44.000 0.00 0.65 0.00 3.66
143 144 5.023533 TGTCAAACCTATAGATCCTGTGC 57.976 43.478 0.00 0.00 0.00 4.57
145 146 4.101741 GTCAAACCTATAGATCCTGTGCCT 59.898 45.833 0.00 0.00 0.00 4.75
146 147 5.304614 GTCAAACCTATAGATCCTGTGCCTA 59.695 44.000 0.00 0.00 0.00 3.93
147 148 5.540337 TCAAACCTATAGATCCTGTGCCTAG 59.460 44.000 0.00 0.00 0.00 3.02
148 149 3.436243 ACCTATAGATCCTGTGCCTAGC 58.564 50.000 0.00 0.00 0.00 3.42
150 151 3.446873 CCTATAGATCCTGTGCCTAGCTG 59.553 52.174 0.00 0.00 0.00 4.24
151 152 2.461300 TAGATCCTGTGCCTAGCTGT 57.539 50.000 0.00 0.00 0.00 4.40
152 153 0.829333 AGATCCTGTGCCTAGCTGTG 59.171 55.000 0.00 0.00 0.00 3.66
153 154 0.539051 GATCCTGTGCCTAGCTGTGT 59.461 55.000 0.00 0.00 0.00 3.72
154 155 0.539051 ATCCTGTGCCTAGCTGTGTC 59.461 55.000 0.00 0.00 0.00 3.67
155 156 1.446792 CCTGTGCCTAGCTGTGTCG 60.447 63.158 0.00 0.00 0.00 4.35
157 158 0.174389 CTGTGCCTAGCTGTGTCGAT 59.826 55.000 0.00 0.00 0.00 3.59
158 159 1.405463 CTGTGCCTAGCTGTGTCGATA 59.595 52.381 0.00 0.00 0.00 2.92
159 160 1.134367 TGTGCCTAGCTGTGTCGATAC 59.866 52.381 5.21 5.21 0.00 2.24
161 162 0.317938 GCCTAGCTGTGTCGATACCG 60.318 60.000 10.00 4.55 37.07 4.02
162 163 0.317938 CCTAGCTGTGTCGATACCGC 60.318 60.000 18.59 18.59 35.37 5.68
163 164 0.317938 CTAGCTGTGTCGATACCGCC 60.318 60.000 21.63 7.37 35.37 6.13
167 168 0.172578 CTGTGTCGATACCGCCTTCA 59.827 55.000 10.00 0.00 35.37 3.02
169 170 1.001068 TGTGTCGATACCGCCTTCAAA 59.999 47.619 10.00 0.00 35.37 2.69
171 172 2.093783 GTGTCGATACCGCCTTCAAAAG 59.906 50.000 0.00 0.00 35.37 2.27
174 175 3.305361 GTCGATACCGCCTTCAAAAGTAC 59.695 47.826 0.00 0.00 35.37 2.73
175 176 3.056678 TCGATACCGCCTTCAAAAGTACA 60.057 43.478 0.00 0.00 35.37 2.90
178 179 3.982576 ACCGCCTTCAAAAGTACAAAG 57.017 42.857 0.00 0.00 0.00 2.77
179 180 3.284617 ACCGCCTTCAAAAGTACAAAGT 58.715 40.909 0.00 0.00 0.00 2.66
180 181 3.697542 ACCGCCTTCAAAAGTACAAAGTT 59.302 39.130 0.00 0.00 0.00 2.66
181 182 4.041723 CCGCCTTCAAAAGTACAAAGTTG 58.958 43.478 0.00 0.00 0.00 3.16
182 183 4.201970 CCGCCTTCAAAAGTACAAAGTTGA 60.202 41.667 0.00 0.00 0.00 3.18
183 184 4.970003 CGCCTTCAAAAGTACAAAGTTGAG 59.030 41.667 0.00 0.00 31.98 3.02
185 186 5.971792 GCCTTCAAAAGTACAAAGTTGAGTC 59.028 40.000 0.00 0.00 31.98 3.36
186 187 6.404293 GCCTTCAAAAGTACAAAGTTGAGTCA 60.404 38.462 0.00 0.00 31.98 3.41
188 189 8.190784 CCTTCAAAAGTACAAAGTTGAGTCATT 58.809 33.333 0.00 0.00 31.98 2.57
189 190 9.573133 CTTCAAAAGTACAAAGTTGAGTCATTT 57.427 29.630 0.00 0.00 31.98 2.32
195 196 9.965824 AAGTACAAAGTTGAGTCATTTATTTGG 57.034 29.630 17.16 0.35 32.01 3.28
218 1693 2.031870 CGGAGGGAGTACATGACATCA 58.968 52.381 0.00 0.00 0.00 3.07
257 1732 7.898946 GCAGTATTTTTGCCTTCATTATCAAC 58.101 34.615 0.00 0.00 35.54 3.18
260 1735 8.184192 AGTATTTTTGCCTTCATTATCAACGAG 58.816 33.333 0.00 0.00 0.00 4.18
264 1739 3.055458 TGCCTTCATTATCAACGAGGTCA 60.055 43.478 0.00 0.00 0.00 4.02
277 1752 2.428890 ACGAGGTCAATGCTAGGAGAAG 59.571 50.000 0.00 0.00 0.00 2.85
281 1756 3.265479 AGGTCAATGCTAGGAGAAGCTTT 59.735 43.478 0.00 0.00 43.19 3.51
294 1769 4.142795 GGAGAAGCTTTGTTTAGTAGCTGC 60.143 45.833 0.00 0.00 44.05 5.25
311 1786 4.974591 AGCTGCATCGTAATCTTTGAAAC 58.025 39.130 1.02 0.00 0.00 2.78
324 1799 5.437289 TCTTTGAAACTCGTGCATCAAAT 57.563 34.783 10.44 0.00 40.03 2.32
326 1801 4.827304 TTGAAACTCGTGCATCAAATCA 57.173 36.364 0.00 0.00 0.00 2.57
327 1802 5.375417 TTGAAACTCGTGCATCAAATCAT 57.625 34.783 0.00 0.00 0.00 2.45
329 1804 4.455190 TGAAACTCGTGCATCAAATCATGA 59.545 37.500 0.00 0.00 43.67 3.07
331 1806 4.611310 ACTCGTGCATCAAATCATGAAG 57.389 40.909 0.00 0.00 42.54 3.02
336 1811 2.817901 GCATCAAATCATGAAGCCCAC 58.182 47.619 0.00 0.00 44.89 4.61
337 1812 2.166870 GCATCAAATCATGAAGCCCACA 59.833 45.455 0.00 0.00 44.89 4.17
338 1813 3.368635 GCATCAAATCATGAAGCCCACAA 60.369 43.478 0.00 0.00 44.89 3.33
339 1814 4.682320 GCATCAAATCATGAAGCCCACAAT 60.682 41.667 0.00 0.00 44.89 2.71
340 1815 4.724074 TCAAATCATGAAGCCCACAATC 57.276 40.909 0.00 0.00 34.30 2.67
349 1824 3.245371 TGAAGCCCACAATCTTCCAGATT 60.245 43.478 0.00 0.00 45.23 2.40
351 1826 2.579860 AGCCCACAATCTTCCAGATTCT 59.420 45.455 0.00 0.00 42.67 2.40
352 1827 2.948315 GCCCACAATCTTCCAGATTCTC 59.052 50.000 0.00 0.00 42.67 2.87
353 1828 3.371380 GCCCACAATCTTCCAGATTCTCT 60.371 47.826 0.00 0.00 42.67 3.10
354 1829 4.853007 CCCACAATCTTCCAGATTCTCTT 58.147 43.478 0.00 0.00 42.67 2.85
355 1830 5.259632 CCCACAATCTTCCAGATTCTCTTT 58.740 41.667 0.00 0.00 42.67 2.52
358 1833 4.633565 ACAATCTTCCAGATTCTCTTTCGC 59.366 41.667 0.00 0.00 42.67 4.70
359 1834 4.751767 ATCTTCCAGATTCTCTTTCGCT 57.248 40.909 0.00 0.00 28.69 4.93
360 1835 4.116747 TCTTCCAGATTCTCTTTCGCTC 57.883 45.455 0.00 0.00 0.00 5.03
361 1836 2.568696 TCCAGATTCTCTTTCGCTCG 57.431 50.000 0.00 0.00 0.00 5.03
362 1837 2.092323 TCCAGATTCTCTTTCGCTCGA 58.908 47.619 0.00 0.00 0.00 4.04
363 1838 2.492088 TCCAGATTCTCTTTCGCTCGAA 59.508 45.455 0.02 0.02 0.00 3.71
364 1839 3.056821 TCCAGATTCTCTTTCGCTCGAAA 60.057 43.478 15.41 15.41 41.22 3.46
365 1840 3.868077 CCAGATTCTCTTTCGCTCGAAAT 59.132 43.478 16.38 3.14 42.34 2.17
366 1841 5.043903 CCAGATTCTCTTTCGCTCGAAATA 58.956 41.667 16.38 9.65 42.34 1.40
367 1842 5.520288 CCAGATTCTCTTTCGCTCGAAATAA 59.480 40.000 16.38 11.89 42.34 1.40
368 1843 6.036083 CCAGATTCTCTTTCGCTCGAAATAAA 59.964 38.462 16.38 11.60 42.34 1.40
369 1844 7.116186 CAGATTCTCTTTCGCTCGAAATAAAG 58.884 38.462 16.38 13.79 42.34 1.85
370 1845 6.814146 AGATTCTCTTTCGCTCGAAATAAAGT 59.186 34.615 16.38 5.23 42.34 2.66
371 1846 6.780706 TTCTCTTTCGCTCGAAATAAAGTT 57.219 33.333 16.38 0.00 42.34 2.66
372 1847 6.153212 TCTCTTTCGCTCGAAATAAAGTTG 57.847 37.500 16.38 5.09 42.34 3.16
373 1848 4.708601 TCTTTCGCTCGAAATAAAGTTGC 58.291 39.130 16.38 0.00 42.34 4.17
374 1849 4.212425 TCTTTCGCTCGAAATAAAGTTGCA 59.788 37.500 16.38 0.00 42.34 4.08
375 1850 3.449322 TCGCTCGAAATAAAGTTGCAC 57.551 42.857 0.00 0.00 0.00 4.57
376 1851 2.158143 CGCTCGAAATAAAGTTGCACG 58.842 47.619 0.00 0.00 0.00 5.34
377 1852 2.411031 CGCTCGAAATAAAGTTGCACGT 60.411 45.455 0.00 0.00 0.00 4.49
378 1853 3.181538 CGCTCGAAATAAAGTTGCACGTA 60.182 43.478 0.00 0.00 0.00 3.57
379 1854 4.323751 GCTCGAAATAAAGTTGCACGTAG 58.676 43.478 0.00 0.00 0.00 3.51
381 1856 5.061311 GCTCGAAATAAAGTTGCACGTAGTA 59.939 40.000 0.00 0.00 41.61 1.82
382 1857 6.400303 GCTCGAAATAAAGTTGCACGTAGTAA 60.400 38.462 0.00 0.00 41.61 2.24
383 1858 7.405469 TCGAAATAAAGTTGCACGTAGTAAA 57.595 32.000 0.00 0.00 41.61 2.01
384 1859 7.849496 TCGAAATAAAGTTGCACGTAGTAAAA 58.151 30.769 0.00 0.00 41.61 1.52
385 1860 8.333908 TCGAAATAAAGTTGCACGTAGTAAAAA 58.666 29.630 0.00 0.00 41.61 1.94
407 1882 8.682936 AAAAAGAAATCGGCATCTAGTATCAT 57.317 30.769 0.00 0.00 0.00 2.45
408 1883 7.897575 AAAGAAATCGGCATCTAGTATCATC 57.102 36.000 0.00 0.00 0.00 2.92
409 1884 6.596309 AGAAATCGGCATCTAGTATCATCA 57.404 37.500 0.00 0.00 0.00 3.07
410 1885 6.393990 AGAAATCGGCATCTAGTATCATCAC 58.606 40.000 0.00 0.00 0.00 3.06
411 1886 5.728637 AATCGGCATCTAGTATCATCACA 57.271 39.130 0.00 0.00 0.00 3.58
412 1887 4.773323 TCGGCATCTAGTATCATCACAG 57.227 45.455 0.00 0.00 0.00 3.66
413 1888 3.057245 TCGGCATCTAGTATCATCACAGC 60.057 47.826 0.00 0.00 0.00 4.40
414 1889 3.305608 CGGCATCTAGTATCATCACAGCA 60.306 47.826 0.00 0.00 0.00 4.41
415 1890 4.635223 GGCATCTAGTATCATCACAGCAA 58.365 43.478 0.00 0.00 0.00 3.91
416 1891 5.243981 GGCATCTAGTATCATCACAGCAAT 58.756 41.667 0.00 0.00 0.00 3.56
417 1892 5.121925 GGCATCTAGTATCATCACAGCAATG 59.878 44.000 0.00 0.00 0.00 2.82
418 1893 5.930569 GCATCTAGTATCATCACAGCAATGA 59.069 40.000 0.00 0.00 37.53 2.57
419 1894 6.426025 GCATCTAGTATCATCACAGCAATGAA 59.574 38.462 0.00 0.00 36.75 2.57
420 1895 7.041576 GCATCTAGTATCATCACAGCAATGAAA 60.042 37.037 0.00 0.00 36.75 2.69
421 1896 7.776933 TCTAGTATCATCACAGCAATGAAAC 57.223 36.000 0.00 0.00 36.75 2.78
422 1897 7.330262 TCTAGTATCATCACAGCAATGAAACA 58.670 34.615 0.00 0.00 36.75 2.83
423 1898 6.822667 AGTATCATCACAGCAATGAAACAA 57.177 33.333 0.00 0.00 36.75 2.83
424 1899 7.218228 AGTATCATCACAGCAATGAAACAAA 57.782 32.000 0.00 0.00 36.75 2.83
425 1900 7.310664 AGTATCATCACAGCAATGAAACAAAG 58.689 34.615 0.00 0.00 36.75 2.77
426 1901 4.300803 TCATCACAGCAATGAAACAAAGC 58.699 39.130 0.00 0.00 30.37 3.51
427 1902 3.797451 TCACAGCAATGAAACAAAGCA 57.203 38.095 0.00 0.00 0.00 3.91
428 1903 4.120792 TCACAGCAATGAAACAAAGCAA 57.879 36.364 0.00 0.00 0.00 3.91
429 1904 4.114073 TCACAGCAATGAAACAAAGCAAG 58.886 39.130 0.00 0.00 0.00 4.01
430 1905 2.867975 ACAGCAATGAAACAAAGCAAGC 59.132 40.909 0.00 0.00 0.00 4.01
431 1906 2.867368 CAGCAATGAAACAAAGCAAGCA 59.133 40.909 0.00 0.00 0.00 3.91
432 1907 3.310227 CAGCAATGAAACAAAGCAAGCAA 59.690 39.130 0.00 0.00 0.00 3.91
433 1908 3.310501 AGCAATGAAACAAAGCAAGCAAC 59.689 39.130 0.00 0.00 0.00 4.17
434 1909 3.063725 GCAATGAAACAAAGCAAGCAACA 59.936 39.130 0.00 0.00 0.00 3.33
435 1910 4.784079 GCAATGAAACAAAGCAAGCAACAG 60.784 41.667 0.00 0.00 0.00 3.16
436 1911 2.270047 TGAAACAAAGCAAGCAACAGC 58.730 42.857 0.00 0.00 0.00 4.40
437 1912 2.270047 GAAACAAAGCAAGCAACAGCA 58.730 42.857 0.00 0.00 0.00 4.41
438 1913 2.383368 AACAAAGCAAGCAACAGCAA 57.617 40.000 0.00 0.00 0.00 3.91
439 1914 2.607631 ACAAAGCAAGCAACAGCAAT 57.392 40.000 0.00 0.00 0.00 3.56
440 1915 2.476821 ACAAAGCAAGCAACAGCAATC 58.523 42.857 0.00 0.00 0.00 2.67
441 1916 2.159071 ACAAAGCAAGCAACAGCAATCA 60.159 40.909 0.00 0.00 0.00 2.57
442 1917 2.867368 CAAAGCAAGCAACAGCAATCAA 59.133 40.909 0.00 0.00 0.00 2.57
443 1918 2.894763 AGCAAGCAACAGCAATCAAA 57.105 40.000 0.00 0.00 0.00 2.69
444 1919 2.750948 AGCAAGCAACAGCAATCAAAG 58.249 42.857 0.00 0.00 0.00 2.77
445 1920 1.193874 GCAAGCAACAGCAATCAAAGC 59.806 47.619 0.00 0.00 0.00 3.51
446 1921 2.475818 CAAGCAACAGCAATCAAAGCA 58.524 42.857 0.00 0.00 0.00 3.91
447 1922 2.144482 AGCAACAGCAATCAAAGCAC 57.856 45.000 0.00 0.00 0.00 4.40
448 1923 1.142474 GCAACAGCAATCAAAGCACC 58.858 50.000 0.00 0.00 0.00 5.01
449 1924 1.269936 GCAACAGCAATCAAAGCACCT 60.270 47.619 0.00 0.00 0.00 4.00
450 1925 2.669364 CAACAGCAATCAAAGCACCTC 58.331 47.619 0.00 0.00 0.00 3.85
451 1926 1.985473 ACAGCAATCAAAGCACCTCA 58.015 45.000 0.00 0.00 0.00 3.86
452 1927 2.522185 ACAGCAATCAAAGCACCTCAT 58.478 42.857 0.00 0.00 0.00 2.90
453 1928 2.490903 ACAGCAATCAAAGCACCTCATC 59.509 45.455 0.00 0.00 0.00 2.92
454 1929 2.490509 CAGCAATCAAAGCACCTCATCA 59.509 45.455 0.00 0.00 0.00 3.07
455 1930 2.753452 AGCAATCAAAGCACCTCATCAG 59.247 45.455 0.00 0.00 0.00 2.90
456 1931 2.734492 GCAATCAAAGCACCTCATCAGC 60.734 50.000 0.00 0.00 0.00 4.26
457 1932 1.376543 ATCAAAGCACCTCATCAGCG 58.623 50.000 0.00 0.00 0.00 5.18
458 1933 0.674581 TCAAAGCACCTCATCAGCGG 60.675 55.000 0.00 0.00 0.00 5.52
459 1934 1.377725 AAAGCACCTCATCAGCGGG 60.378 57.895 0.00 0.00 0.00 6.13
460 1935 2.129555 AAAGCACCTCATCAGCGGGT 62.130 55.000 0.00 0.00 0.00 5.28
462 1937 2.821366 CACCTCATCAGCGGGTGC 60.821 66.667 1.51 0.00 42.91 5.01
463 1938 4.101448 ACCTCATCAGCGGGTGCC 62.101 66.667 1.51 0.00 44.31 5.01
479 1954 4.033776 CCGGGGCTGCAAGGAGAA 62.034 66.667 0.50 0.00 0.00 2.87
480 1955 2.034066 CGGGGCTGCAAGGAGAAA 59.966 61.111 0.50 0.00 0.00 2.52
481 1956 2.335712 CGGGGCTGCAAGGAGAAAC 61.336 63.158 0.50 0.00 0.00 2.78
482 1957 1.228552 GGGGCTGCAAGGAGAAACA 60.229 57.895 0.50 0.00 0.00 2.83
483 1958 0.827507 GGGGCTGCAAGGAGAAACAA 60.828 55.000 0.50 0.00 0.00 2.83
484 1959 0.600057 GGGCTGCAAGGAGAAACAAG 59.400 55.000 0.50 0.00 0.00 3.16
485 1960 1.609208 GGCTGCAAGGAGAAACAAGA 58.391 50.000 0.50 0.00 0.00 3.02
486 1961 1.956477 GGCTGCAAGGAGAAACAAGAA 59.044 47.619 0.50 0.00 0.00 2.52
487 1962 2.030451 GGCTGCAAGGAGAAACAAGAAG 60.030 50.000 0.50 0.00 0.00 2.85
488 1963 2.606551 GCTGCAAGGAGAAACAAGAAGC 60.607 50.000 0.00 0.00 0.00 3.86
489 1964 2.883386 CTGCAAGGAGAAACAAGAAGCT 59.117 45.455 0.00 0.00 0.00 3.74
490 1965 4.067896 CTGCAAGGAGAAACAAGAAGCTA 58.932 43.478 0.00 0.00 0.00 3.32
491 1966 4.067896 TGCAAGGAGAAACAAGAAGCTAG 58.932 43.478 0.00 0.00 0.00 3.42
492 1967 3.438434 GCAAGGAGAAACAAGAAGCTAGG 59.562 47.826 0.00 0.00 0.00 3.02
493 1968 4.646572 CAAGGAGAAACAAGAAGCTAGGT 58.353 43.478 0.00 0.00 0.00 3.08
494 1969 4.545208 AGGAGAAACAAGAAGCTAGGTC 57.455 45.455 0.00 0.00 0.00 3.85
495 1970 3.262151 AGGAGAAACAAGAAGCTAGGTCC 59.738 47.826 0.00 0.00 0.00 4.46
496 1971 3.254892 GAGAAACAAGAAGCTAGGTCCG 58.745 50.000 0.00 0.00 0.00 4.79
497 1972 2.028020 AGAAACAAGAAGCTAGGTCCGG 60.028 50.000 0.00 0.00 0.00 5.14
498 1973 1.349067 AACAAGAAGCTAGGTCCGGT 58.651 50.000 0.00 0.00 0.00 5.28
499 1974 0.608640 ACAAGAAGCTAGGTCCGGTG 59.391 55.000 0.00 0.00 0.00 4.94
500 1975 0.741221 CAAGAAGCTAGGTCCGGTGC 60.741 60.000 0.00 0.00 0.00 5.01
501 1976 1.192146 AAGAAGCTAGGTCCGGTGCA 61.192 55.000 0.00 0.00 0.00 4.57
502 1977 1.153549 GAAGCTAGGTCCGGTGCAG 60.154 63.158 0.00 0.00 0.00 4.41
503 1978 2.579684 GAAGCTAGGTCCGGTGCAGG 62.580 65.000 0.00 0.00 0.00 4.85
504 1979 3.391382 GCTAGGTCCGGTGCAGGT 61.391 66.667 0.00 0.00 0.00 4.00
505 1980 2.579201 CTAGGTCCGGTGCAGGTG 59.421 66.667 0.00 0.00 0.00 4.00
506 1981 3.000819 TAGGTCCGGTGCAGGTGG 61.001 66.667 0.00 0.00 0.00 4.61
507 1982 3.839046 TAGGTCCGGTGCAGGTGGT 62.839 63.158 0.00 0.00 0.00 4.16
511 1986 3.632080 CCGGTGCAGGTGGTGGTA 61.632 66.667 0.00 0.00 0.00 3.25
512 1987 2.428187 CGGTGCAGGTGGTGGTAA 59.572 61.111 0.00 0.00 0.00 2.85
513 1988 1.964373 CGGTGCAGGTGGTGGTAAC 60.964 63.158 0.00 0.00 0.00 2.50
538 2013 8.366671 CAAGCTACTTGTAGTACTTTTCTTGT 57.633 34.615 0.00 0.00 36.79 3.16
539 2014 8.488764 CAAGCTACTTGTAGTACTTTTCTTGTC 58.511 37.037 0.00 0.00 36.79 3.18
540 2015 7.723324 AGCTACTTGTAGTACTTTTCTTGTCA 58.277 34.615 0.00 0.00 0.00 3.58
541 2016 7.868415 AGCTACTTGTAGTACTTTTCTTGTCAG 59.132 37.037 0.00 0.00 0.00 3.51
542 2017 7.116519 GCTACTTGTAGTACTTTTCTTGTCAGG 59.883 40.741 0.00 0.00 0.00 3.86
543 2018 6.885922 ACTTGTAGTACTTTTCTTGTCAGGT 58.114 36.000 0.00 0.00 0.00 4.00
544 2019 7.336396 ACTTGTAGTACTTTTCTTGTCAGGTT 58.664 34.615 0.00 0.00 0.00 3.50
545 2020 7.280205 ACTTGTAGTACTTTTCTTGTCAGGTTG 59.720 37.037 0.00 0.00 0.00 3.77
546 2021 6.880484 TGTAGTACTTTTCTTGTCAGGTTGA 58.120 36.000 0.00 0.00 0.00 3.18
547 2022 6.984474 TGTAGTACTTTTCTTGTCAGGTTGAG 59.016 38.462 0.00 0.00 0.00 3.02
548 2023 6.235231 AGTACTTTTCTTGTCAGGTTGAGA 57.765 37.500 0.00 0.00 0.00 3.27
549 2024 6.650120 AGTACTTTTCTTGTCAGGTTGAGAA 58.350 36.000 0.00 0.00 0.00 2.87
550 2025 6.763610 AGTACTTTTCTTGTCAGGTTGAGAAG 59.236 38.462 9.06 9.06 45.76 2.85
551 2026 4.884164 ACTTTTCTTGTCAGGTTGAGAAGG 59.116 41.667 13.78 3.39 44.85 3.46
552 2027 4.771114 TTTCTTGTCAGGTTGAGAAGGA 57.229 40.909 13.78 4.82 44.85 3.36
553 2028 4.771114 TTCTTGTCAGGTTGAGAAGGAA 57.229 40.909 13.78 6.49 44.85 3.36
554 2029 4.771114 TCTTGTCAGGTTGAGAAGGAAA 57.229 40.909 13.78 0.00 44.85 3.13
555 2030 4.451900 TCTTGTCAGGTTGAGAAGGAAAC 58.548 43.478 13.78 0.00 44.85 2.78
556 2031 3.208747 TGTCAGGTTGAGAAGGAAACC 57.791 47.619 0.00 0.00 45.20 3.27
561 2036 2.784347 GGTTGAGAAGGAAACCTGAGG 58.216 52.381 0.00 0.00 42.20 3.86
562 2037 2.155279 GTTGAGAAGGAAACCTGAGGC 58.845 52.381 0.00 0.00 32.13 4.70
563 2038 1.434188 TGAGAAGGAAACCTGAGGCA 58.566 50.000 0.00 0.00 32.13 4.75
564 2039 1.072331 TGAGAAGGAAACCTGAGGCAC 59.928 52.381 0.00 0.00 32.13 5.01
565 2040 0.402121 AGAAGGAAACCTGAGGCACC 59.598 55.000 0.00 0.00 32.13 5.01
566 2041 0.110486 GAAGGAAACCTGAGGCACCA 59.890 55.000 0.00 0.00 32.13 4.17
567 2042 0.555769 AAGGAAACCTGAGGCACCAA 59.444 50.000 0.00 0.00 32.13 3.67
568 2043 0.555769 AGGAAACCTGAGGCACCAAA 59.444 50.000 0.00 0.00 29.57 3.28
569 2044 1.063266 AGGAAACCTGAGGCACCAAAA 60.063 47.619 0.00 0.00 29.57 2.44
570 2045 1.970640 GGAAACCTGAGGCACCAAAAT 59.029 47.619 0.00 0.00 0.00 1.82
571 2046 2.368548 GGAAACCTGAGGCACCAAAATT 59.631 45.455 0.00 0.00 0.00 1.82
572 2047 3.181455 GGAAACCTGAGGCACCAAAATTT 60.181 43.478 0.00 0.00 0.00 1.82
573 2048 3.751479 AACCTGAGGCACCAAAATTTC 57.249 42.857 0.00 0.00 0.00 2.17
574 2049 2.962859 ACCTGAGGCACCAAAATTTCT 58.037 42.857 0.00 0.00 0.00 2.52
575 2050 2.629617 ACCTGAGGCACCAAAATTTCTG 59.370 45.455 0.00 0.00 0.00 3.02
576 2051 2.611224 CCTGAGGCACCAAAATTTCTGC 60.611 50.000 6.83 6.83 0.00 4.26
577 2052 2.298163 CTGAGGCACCAAAATTTCTGCT 59.702 45.455 12.60 3.00 0.00 4.24
578 2053 3.495331 TGAGGCACCAAAATTTCTGCTA 58.505 40.909 12.60 1.88 0.00 3.49
579 2054 4.088634 TGAGGCACCAAAATTTCTGCTAT 58.911 39.130 12.60 5.14 0.00 2.97
580 2055 4.527816 TGAGGCACCAAAATTTCTGCTATT 59.472 37.500 12.60 3.15 0.00 1.73
581 2056 5.011943 TGAGGCACCAAAATTTCTGCTATTT 59.988 36.000 12.60 0.00 0.00 1.40
582 2057 5.868454 AGGCACCAAAATTTCTGCTATTTT 58.132 33.333 12.60 0.00 36.03 1.82
583 2058 5.702209 AGGCACCAAAATTTCTGCTATTTTG 59.298 36.000 11.96 11.96 45.70 2.44
589 2064 6.834876 CAAAATTTCTGCTATTTTGGAAGGC 58.165 36.000 11.34 0.00 43.89 4.35
590 2065 5.743636 AATTTCTGCTATTTTGGAAGGCA 57.256 34.783 0.00 0.00 0.00 4.75
591 2066 5.743636 ATTTCTGCTATTTTGGAAGGCAA 57.256 34.783 0.00 0.00 32.43 4.52
592 2067 5.743636 TTTCTGCTATTTTGGAAGGCAAT 57.256 34.783 0.00 0.00 32.43 3.56
593 2068 4.724074 TCTGCTATTTTGGAAGGCAATG 57.276 40.909 0.00 0.00 32.43 2.82
594 2069 3.119029 TCTGCTATTTTGGAAGGCAATGC 60.119 43.478 0.00 0.00 32.43 3.56
595 2070 2.833338 TGCTATTTTGGAAGGCAATGCT 59.167 40.909 4.82 0.00 0.00 3.79
596 2071 3.192466 GCTATTTTGGAAGGCAATGCTG 58.808 45.455 4.82 0.00 0.00 4.41
597 2072 3.368739 GCTATTTTGGAAGGCAATGCTGT 60.369 43.478 4.82 0.00 0.00 4.40
598 2073 2.529780 TTTTGGAAGGCAATGCTGTG 57.470 45.000 4.82 0.00 0.00 3.66
599 2074 0.680618 TTTGGAAGGCAATGCTGTGG 59.319 50.000 4.82 0.00 0.00 4.17
600 2075 1.818959 TTGGAAGGCAATGCTGTGGC 61.819 55.000 4.82 5.76 44.15 5.01
604 2079 2.993264 GGCAATGCTGTGGCCACT 60.993 61.111 34.75 13.76 46.92 4.00
605 2080 2.576832 GGCAATGCTGTGGCCACTT 61.577 57.895 34.75 19.13 46.92 3.16
606 2081 1.368579 GCAATGCTGTGGCCACTTT 59.631 52.632 34.75 19.97 37.74 2.66
607 2082 0.947180 GCAATGCTGTGGCCACTTTG 60.947 55.000 34.75 28.54 37.74 2.77
608 2083 0.390124 CAATGCTGTGGCCACTTTGT 59.610 50.000 34.75 16.76 37.74 2.83
609 2084 0.390124 AATGCTGTGGCCACTTTGTG 59.610 50.000 34.75 19.86 37.74 3.33
610 2085 0.467844 ATGCTGTGGCCACTTTGTGA 60.468 50.000 34.75 14.14 37.74 3.58
611 2086 1.360192 GCTGTGGCCACTTTGTGAC 59.640 57.895 34.75 13.38 35.23 3.67
612 2087 1.383456 GCTGTGGCCACTTTGTGACA 61.383 55.000 34.75 12.67 35.23 3.58
613 2088 1.102154 CTGTGGCCACTTTGTGACAA 58.898 50.000 34.75 11.86 35.23 3.18
614 2089 1.066002 CTGTGGCCACTTTGTGACAAG 59.934 52.381 34.75 17.53 35.23 3.16
615 2090 1.340502 TGTGGCCACTTTGTGACAAGA 60.341 47.619 34.75 8.78 35.23 3.02
616 2091 1.065551 GTGGCCACTTTGTGACAAGAC 59.934 52.381 29.12 0.00 35.23 3.01
617 2092 0.668535 GGCCACTTTGTGACAAGACC 59.331 55.000 0.00 0.00 35.23 3.85
618 2093 1.388547 GCCACTTTGTGACAAGACCA 58.611 50.000 0.00 0.00 35.23 4.02
619 2094 1.065551 GCCACTTTGTGACAAGACCAC 59.934 52.381 0.00 0.00 35.23 4.16
620 2095 2.364632 CCACTTTGTGACAAGACCACA 58.635 47.619 0.00 0.00 42.16 4.17
621 2096 2.355756 CCACTTTGTGACAAGACCACAG 59.644 50.000 0.00 0.00 44.22 3.66
622 2097 2.355756 CACTTTGTGACAAGACCACAGG 59.644 50.000 0.00 0.00 44.22 4.00
623 2098 1.949525 CTTTGTGACAAGACCACAGGG 59.050 52.381 0.00 0.00 44.22 4.45
624 2099 0.465460 TTGTGACAAGACCACAGGGC 60.465 55.000 0.00 0.00 44.22 5.19
625 2100 1.600916 GTGACAAGACCACAGGGCC 60.601 63.158 0.00 0.00 37.90 5.80
626 2101 2.075566 TGACAAGACCACAGGGCCA 61.076 57.895 6.18 0.00 37.90 5.36
627 2102 1.150536 GACAAGACCACAGGGCCAA 59.849 57.895 6.18 0.00 37.90 4.52
628 2103 0.467290 GACAAGACCACAGGGCCAAA 60.467 55.000 6.18 0.00 37.90 3.28
629 2104 0.755327 ACAAGACCACAGGGCCAAAC 60.755 55.000 6.18 0.00 37.90 2.93
630 2105 0.754957 CAAGACCACAGGGCCAAACA 60.755 55.000 6.18 0.00 37.90 2.83
631 2106 0.468029 AAGACCACAGGGCCAAACAG 60.468 55.000 6.18 0.00 37.90 3.16
632 2107 1.150536 GACCACAGGGCCAAACAGA 59.849 57.895 6.18 0.00 37.90 3.41
633 2108 0.251341 GACCACAGGGCCAAACAGAT 60.251 55.000 6.18 0.00 37.90 2.90
634 2109 0.251341 ACCACAGGGCCAAACAGATC 60.251 55.000 6.18 0.00 37.90 2.75
635 2110 0.251297 CCACAGGGCCAAACAGATCA 60.251 55.000 6.18 0.00 0.00 2.92
636 2111 1.617804 CCACAGGGCCAAACAGATCAT 60.618 52.381 6.18 0.00 0.00 2.45
637 2112 1.475280 CACAGGGCCAAACAGATCATG 59.525 52.381 6.18 0.00 0.00 3.07
638 2113 1.108776 CAGGGCCAAACAGATCATGG 58.891 55.000 6.18 0.00 37.29 3.66
639 2114 0.706433 AGGGCCAAACAGATCATGGT 59.294 50.000 6.18 0.00 36.57 3.55
640 2115 0.819582 GGGCCAAACAGATCATGGTG 59.180 55.000 4.39 0.00 36.57 4.17
641 2116 1.616725 GGGCCAAACAGATCATGGTGA 60.617 52.381 4.39 0.00 36.57 4.02
642 2117 1.747355 GGCCAAACAGATCATGGTGAG 59.253 52.381 0.00 0.00 36.57 3.51
643 2118 2.618816 GGCCAAACAGATCATGGTGAGA 60.619 50.000 0.00 0.00 36.57 3.27
644 2119 2.421424 GCCAAACAGATCATGGTGAGAC 59.579 50.000 0.00 0.00 36.57 3.36
645 2120 3.678289 CCAAACAGATCATGGTGAGACA 58.322 45.455 0.00 0.00 0.00 3.41
646 2121 4.267536 CCAAACAGATCATGGTGAGACAT 58.732 43.478 0.00 0.00 0.00 3.06
647 2122 4.703575 CCAAACAGATCATGGTGAGACATT 59.296 41.667 0.00 0.00 0.00 2.71
648 2123 5.184479 CCAAACAGATCATGGTGAGACATTT 59.816 40.000 0.00 0.00 0.00 2.32
649 2124 6.320171 CAAACAGATCATGGTGAGACATTTC 58.680 40.000 0.00 0.00 0.00 2.17
650 2125 4.521146 ACAGATCATGGTGAGACATTTCC 58.479 43.478 0.00 0.00 0.00 3.13
651 2126 4.226846 ACAGATCATGGTGAGACATTTCCT 59.773 41.667 0.00 0.00 0.00 3.36
652 2127 5.426509 ACAGATCATGGTGAGACATTTCCTA 59.573 40.000 0.00 0.00 0.00 2.94
653 2128 5.990386 CAGATCATGGTGAGACATTTCCTAG 59.010 44.000 0.00 0.00 0.00 3.02
654 2129 5.664908 AGATCATGGTGAGACATTTCCTAGT 59.335 40.000 0.00 0.00 0.00 2.57
655 2130 6.841229 AGATCATGGTGAGACATTTCCTAGTA 59.159 38.462 0.00 0.00 0.00 1.82
656 2131 6.222038 TCATGGTGAGACATTTCCTAGTAC 57.778 41.667 0.00 0.00 0.00 2.73
657 2132 5.719563 TCATGGTGAGACATTTCCTAGTACA 59.280 40.000 0.00 0.00 0.00 2.90
658 2133 6.384015 TCATGGTGAGACATTTCCTAGTACAT 59.616 38.462 0.00 0.00 0.00 2.29
659 2134 6.222038 TGGTGAGACATTTCCTAGTACATC 57.778 41.667 0.00 0.00 0.00 3.06
660 2135 5.958380 TGGTGAGACATTTCCTAGTACATCT 59.042 40.000 0.00 0.00 0.00 2.90
661 2136 6.440647 TGGTGAGACATTTCCTAGTACATCTT 59.559 38.462 0.00 0.00 0.00 2.40
662 2137 6.981559 GGTGAGACATTTCCTAGTACATCTTC 59.018 42.308 0.00 0.00 0.00 2.87
663 2138 7.363880 GGTGAGACATTTCCTAGTACATCTTCA 60.364 40.741 0.00 0.00 0.00 3.02
664 2139 7.704472 GTGAGACATTTCCTAGTACATCTTCAG 59.296 40.741 0.00 0.00 0.00 3.02
665 2140 7.615757 TGAGACATTTCCTAGTACATCTTCAGA 59.384 37.037 0.00 0.00 0.00 3.27
666 2141 8.367660 AGACATTTCCTAGTACATCTTCAGAA 57.632 34.615 0.00 0.00 0.00 3.02
667 2142 8.816894 AGACATTTCCTAGTACATCTTCAGAAA 58.183 33.333 0.00 0.00 0.00 2.52
668 2143 9.606631 GACATTTCCTAGTACATCTTCAGAAAT 57.393 33.333 0.00 0.00 32.92 2.17
669 2144 9.606631 ACATTTCCTAGTACATCTTCAGAAATC 57.393 33.333 0.00 0.00 31.67 2.17
670 2145 9.050601 CATTTCCTAGTACATCTTCAGAAATCC 57.949 37.037 0.00 0.00 31.67 3.01
671 2146 6.732896 TCCTAGTACATCTTCAGAAATCCC 57.267 41.667 0.00 0.00 0.00 3.85
672 2147 6.444704 TCCTAGTACATCTTCAGAAATCCCT 58.555 40.000 0.00 0.00 0.00 4.20
673 2148 7.592736 TCCTAGTACATCTTCAGAAATCCCTA 58.407 38.462 0.00 0.00 0.00 3.53
674 2149 8.065627 TCCTAGTACATCTTCAGAAATCCCTAA 58.934 37.037 0.00 0.00 0.00 2.69
675 2150 8.364142 CCTAGTACATCTTCAGAAATCCCTAAG 58.636 40.741 0.00 0.00 0.00 2.18
676 2151 7.979786 AGTACATCTTCAGAAATCCCTAAGA 57.020 36.000 0.00 0.00 0.00 2.10
677 2152 8.380742 AGTACATCTTCAGAAATCCCTAAGAA 57.619 34.615 0.00 0.00 30.56 2.52
678 2153 8.826765 AGTACATCTTCAGAAATCCCTAAGAAA 58.173 33.333 0.00 0.00 30.56 2.52
679 2154 9.449719 GTACATCTTCAGAAATCCCTAAGAAAA 57.550 33.333 0.00 0.00 30.56 2.29
680 2155 8.341892 ACATCTTCAGAAATCCCTAAGAAAAC 57.658 34.615 0.00 0.00 30.56 2.43
681 2156 7.119846 ACATCTTCAGAAATCCCTAAGAAAACG 59.880 37.037 0.00 0.00 30.56 3.60
682 2157 5.411669 TCTTCAGAAATCCCTAAGAAAACGC 59.588 40.000 0.00 0.00 0.00 4.84
683 2158 4.647611 TCAGAAATCCCTAAGAAAACGCA 58.352 39.130 0.00 0.00 0.00 5.24
684 2159 4.695455 TCAGAAATCCCTAAGAAAACGCAG 59.305 41.667 0.00 0.00 0.00 5.18
685 2160 3.440522 AGAAATCCCTAAGAAAACGCAGC 59.559 43.478 0.00 0.00 0.00 5.25
686 2161 2.489938 ATCCCTAAGAAAACGCAGCA 57.510 45.000 0.00 0.00 0.00 4.41
687 2162 1.519408 TCCCTAAGAAAACGCAGCAC 58.481 50.000 0.00 0.00 0.00 4.40
688 2163 0.521735 CCCTAAGAAAACGCAGCACC 59.478 55.000 0.00 0.00 0.00 5.01
689 2164 1.234821 CCTAAGAAAACGCAGCACCA 58.765 50.000 0.00 0.00 0.00 4.17
690 2165 1.812571 CCTAAGAAAACGCAGCACCAT 59.187 47.619 0.00 0.00 0.00 3.55
691 2166 2.159517 CCTAAGAAAACGCAGCACCATC 60.160 50.000 0.00 0.00 0.00 3.51
692 2167 1.609208 AAGAAAACGCAGCACCATCT 58.391 45.000 0.00 0.00 0.00 2.90
693 2168 1.160137 AGAAAACGCAGCACCATCTC 58.840 50.000 0.00 0.00 0.00 2.75
694 2169 0.179215 GAAAACGCAGCACCATCTCG 60.179 55.000 0.00 0.00 0.00 4.04
695 2170 0.884704 AAAACGCAGCACCATCTCGT 60.885 50.000 0.00 0.00 34.63 4.18
696 2171 0.884704 AAACGCAGCACCATCTCGTT 60.885 50.000 0.00 0.00 43.93 3.85
697 2172 0.884704 AACGCAGCACCATCTCGTTT 60.885 50.000 0.00 0.00 39.91 3.60
698 2173 0.037697 ACGCAGCACCATCTCGTTTA 60.038 50.000 0.00 0.00 0.00 2.01
699 2174 1.075542 CGCAGCACCATCTCGTTTAA 58.924 50.000 0.00 0.00 0.00 1.52
700 2175 1.463056 CGCAGCACCATCTCGTTTAAA 59.537 47.619 0.00 0.00 0.00 1.52
701 2176 2.095969 CGCAGCACCATCTCGTTTAAAA 60.096 45.455 0.00 0.00 0.00 1.52
702 2177 3.608241 CGCAGCACCATCTCGTTTAAAAA 60.608 43.478 0.00 0.00 0.00 1.94
793 2278 1.983605 GACGGAACACATGTGTACTCG 59.016 52.381 30.75 30.12 44.13 4.18
794 2279 0.713883 CGGAACACATGTGTACTCGC 59.286 55.000 30.75 17.10 44.13 5.03
795 2280 1.790755 GGAACACATGTGTACTCGCA 58.209 50.000 30.75 0.00 44.13 5.10
796 2281 2.346803 GGAACACATGTGTACTCGCAT 58.653 47.619 30.75 14.17 44.13 4.73
797 2282 3.517602 GGAACACATGTGTACTCGCATA 58.482 45.455 30.75 0.00 44.13 3.14
798 2283 4.119862 GGAACACATGTGTACTCGCATAT 58.880 43.478 30.75 12.65 44.13 1.78
799 2284 4.025730 GGAACACATGTGTACTCGCATATG 60.026 45.833 30.75 0.00 44.13 1.78
806 2294 4.180817 TGTGTACTCGCATATGAGGTTTG 58.819 43.478 6.97 0.00 40.39 2.93
1828 3336 2.041216 GGTACCCTTGTCCACCTTGATT 59.959 50.000 0.00 0.00 0.00 2.57
2141 3654 9.072375 TCAACCAACAGTATTACAATCAATTGA 57.928 29.630 11.26 11.26 40.14 2.57
2191 3704 6.602803 TGTGATCAATTGCCATAACTGTACAT 59.397 34.615 0.00 0.00 0.00 2.29
2227 3746 5.640783 TGTGATCAAATCTACAGAACTGCAG 59.359 40.000 13.48 13.48 0.00 4.41
2254 3773 1.135546 TGCAACCACTCACAACGTTTG 60.136 47.619 0.00 0.85 0.00 2.93
2383 4008 2.375146 GTGGTAAACATAAGGGCAGGG 58.625 52.381 0.00 0.00 0.00 4.45
2385 4010 1.567175 GGTAAACATAAGGGCAGGGGA 59.433 52.381 0.00 0.00 0.00 4.81
2386 4011 2.177016 GGTAAACATAAGGGCAGGGGAT 59.823 50.000 0.00 0.00 0.00 3.85
2423 4048 7.453393 AGATCACAGGAGAGAAAAACATACAA 58.547 34.615 0.00 0.00 0.00 2.41
2430 4062 8.877779 CAGGAGAGAAAAACATACAACTCTATG 58.122 37.037 0.00 0.00 35.34 2.23
2440 4072 3.521947 ACAACTCTATGTAAGGACGGC 57.478 47.619 0.00 0.00 0.00 5.68
2461 4093 4.099881 GGCATATTCCTTGGCAAAAGATGA 59.900 41.667 18.51 4.38 39.31 2.92
2462 4094 5.221581 GGCATATTCCTTGGCAAAAGATGAT 60.222 40.000 18.51 6.46 39.31 2.45
2467 4099 5.393068 TCCTTGGCAAAAGATGATCCTAT 57.607 39.130 0.00 0.00 0.00 2.57
2471 4103 5.114764 TGGCAAAAGATGATCCTATGACA 57.885 39.130 0.00 0.00 0.00 3.58
2537 4190 2.357637 CGAACCCAACAGAAACATGTGT 59.642 45.455 0.00 0.00 32.52 3.72
2543 4196 4.379813 CCCAACAGAAACATGTGTAGATGC 60.380 45.833 0.00 0.00 32.52 3.91
2550 4203 6.475402 CAGAAACATGTGTAGATGCGTATACA 59.525 38.462 9.31 9.31 30.04 2.29
2563 4216 5.849357 TGCGTATACAAACTTAACCACAG 57.151 39.130 3.32 0.00 0.00 3.66
2565 4218 5.636121 TGCGTATACAAACTTAACCACAGAG 59.364 40.000 3.32 0.00 0.00 3.35
2568 4221 7.329226 GCGTATACAAACTTAACCACAGAGTAA 59.671 37.037 3.32 0.00 0.00 2.24
2626 4284 7.012704 ACAAAATAATCACTAGCATGCACCTAG 59.987 37.037 21.98 15.15 38.55 3.02
2639 4297 1.673665 ACCTAGCAGCAGCAGCAAC 60.674 57.895 12.92 0.00 45.49 4.17
2640 4298 1.376942 CCTAGCAGCAGCAGCAACT 60.377 57.895 12.92 2.32 45.49 3.16
2642 4300 0.168348 CTAGCAGCAGCAGCAACTTG 59.832 55.000 12.92 0.00 45.49 3.16
2663 4321 2.861935 GCACAATTATCAGCATGCAACC 59.138 45.455 21.98 0.00 34.76 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 1.972075 TGGTACATGAACCGAACCTGA 59.028 47.619 0.00 0.00 42.91 3.86
82 83 8.786898 AAATGGAATTCGAATCTATGGTACATG 58.213 33.333 11.83 0.00 38.72 3.21
83 84 8.924511 AAATGGAATTCGAATCTATGGTACAT 57.075 30.769 11.83 4.13 38.72 2.29
84 85 9.268268 GTAAATGGAATTCGAATCTATGGTACA 57.732 33.333 11.83 1.58 38.44 2.90
85 86 9.490379 AGTAAATGGAATTCGAATCTATGGTAC 57.510 33.333 11.83 10.20 33.67 3.34
87 88 8.840321 CAAGTAAATGGAATTCGAATCTATGGT 58.160 33.333 11.83 0.00 33.67 3.55
88 89 9.056005 TCAAGTAAATGGAATTCGAATCTATGG 57.944 33.333 11.83 0.00 33.67 2.74
91 92 9.056005 CCATCAAGTAAATGGAATTCGAATCTA 57.944 33.333 11.83 3.78 45.51 1.98
92 93 7.469181 GCCATCAAGTAAATGGAATTCGAATCT 60.469 37.037 11.83 1.78 45.51 2.40
93 94 6.638468 GCCATCAAGTAAATGGAATTCGAATC 59.362 38.462 11.83 5.16 45.51 2.52
94 95 6.096705 TGCCATCAAGTAAATGGAATTCGAAT 59.903 34.615 4.39 4.39 45.51 3.34
95 96 5.417266 TGCCATCAAGTAAATGGAATTCGAA 59.583 36.000 0.00 0.00 45.51 3.71
96 97 4.946772 TGCCATCAAGTAAATGGAATTCGA 59.053 37.500 6.33 0.00 45.51 3.71
97 98 5.036737 GTGCCATCAAGTAAATGGAATTCG 58.963 41.667 6.33 0.00 45.51 3.34
98 99 6.038356 CAGTGCCATCAAGTAAATGGAATTC 58.962 40.000 6.33 0.00 45.51 2.17
100 101 5.018809 ACAGTGCCATCAAGTAAATGGAAT 58.981 37.500 6.33 0.00 45.51 3.01
102 103 4.009675 GACAGTGCCATCAAGTAAATGGA 58.990 43.478 6.33 0.00 45.51 3.41
105 106 5.278957 GGTTTGACAGTGCCATCAAGTAAAT 60.279 40.000 0.00 0.00 36.26 1.40
106 107 4.037446 GGTTTGACAGTGCCATCAAGTAAA 59.963 41.667 0.00 0.00 36.26 2.01
107 108 3.568007 GGTTTGACAGTGCCATCAAGTAA 59.432 43.478 0.00 0.00 36.26 2.24
109 110 1.956477 GGTTTGACAGTGCCATCAAGT 59.044 47.619 0.00 0.00 36.26 3.16
110 111 2.233271 AGGTTTGACAGTGCCATCAAG 58.767 47.619 0.00 0.00 36.26 3.02
111 112 2.363306 AGGTTTGACAGTGCCATCAA 57.637 45.000 0.00 0.00 33.03 2.57
112 113 3.719268 ATAGGTTTGACAGTGCCATCA 57.281 42.857 0.00 0.00 0.00 3.07
113 114 5.023533 TCTATAGGTTTGACAGTGCCATC 57.976 43.478 0.00 0.00 0.00 3.51
114 115 5.455326 GGATCTATAGGTTTGACAGTGCCAT 60.455 44.000 0.00 0.00 0.00 4.40
115 116 4.141711 GGATCTATAGGTTTGACAGTGCCA 60.142 45.833 0.00 0.00 0.00 4.92
117 118 5.053145 CAGGATCTATAGGTTTGACAGTGC 58.947 45.833 0.00 0.00 0.00 4.40
118 119 6.045318 CACAGGATCTATAGGTTTGACAGTG 58.955 44.000 0.00 0.00 0.00 3.66
120 121 5.053145 GCACAGGATCTATAGGTTTGACAG 58.947 45.833 0.00 0.00 0.00 3.51
122 123 4.101741 AGGCACAGGATCTATAGGTTTGAC 59.898 45.833 0.00 0.00 0.00 3.18
123 124 4.298626 AGGCACAGGATCTATAGGTTTGA 58.701 43.478 0.00 0.00 0.00 2.69
124 125 4.696479 AGGCACAGGATCTATAGGTTTG 57.304 45.455 0.00 0.00 0.00 2.93
125 126 4.284746 GCTAGGCACAGGATCTATAGGTTT 59.715 45.833 0.00 0.00 0.00 3.27
126 127 3.835395 GCTAGGCACAGGATCTATAGGTT 59.165 47.826 0.00 0.00 0.00 3.50
127 128 3.076785 AGCTAGGCACAGGATCTATAGGT 59.923 47.826 0.00 0.00 0.00 3.08
129 130 4.082300 CACAGCTAGGCACAGGATCTATAG 60.082 50.000 0.00 0.00 0.00 1.31
130 131 3.829026 CACAGCTAGGCACAGGATCTATA 59.171 47.826 0.00 0.00 0.00 1.31
132 133 2.034878 CACAGCTAGGCACAGGATCTA 58.965 52.381 0.00 0.00 0.00 1.98
134 135 0.539051 ACACAGCTAGGCACAGGATC 59.461 55.000 0.00 0.00 0.00 3.36
136 137 1.877576 CGACACAGCTAGGCACAGGA 61.878 60.000 0.00 0.00 0.00 3.86
137 138 1.446792 CGACACAGCTAGGCACAGG 60.447 63.158 0.00 0.00 0.00 4.00
140 141 1.536284 GGTATCGACACAGCTAGGCAC 60.536 57.143 0.00 0.00 0.00 5.01
141 142 0.744874 GGTATCGACACAGCTAGGCA 59.255 55.000 0.00 0.00 0.00 4.75
142 143 0.317938 CGGTATCGACACAGCTAGGC 60.318 60.000 0.00 0.00 39.00 3.93
143 144 0.317938 GCGGTATCGACACAGCTAGG 60.318 60.000 11.84 0.00 36.78 3.02
145 146 1.731700 GGCGGTATCGACACAGCTA 59.268 57.895 18.14 0.00 45.37 3.32
146 147 2.494918 GGCGGTATCGACACAGCT 59.505 61.111 18.14 0.00 45.37 4.24
152 153 2.344025 ACTTTTGAAGGCGGTATCGAC 58.656 47.619 0.00 0.00 46.68 4.20
153 154 2.754946 ACTTTTGAAGGCGGTATCGA 57.245 45.000 0.00 0.00 39.00 3.59
154 155 3.255725 TGTACTTTTGAAGGCGGTATCG 58.744 45.455 0.00 0.00 39.81 2.92
155 156 5.180680 ACTTTGTACTTTTGAAGGCGGTATC 59.819 40.000 0.00 0.00 0.00 2.24
157 158 4.453751 ACTTTGTACTTTTGAAGGCGGTA 58.546 39.130 0.00 0.00 0.00 4.02
158 159 3.284617 ACTTTGTACTTTTGAAGGCGGT 58.715 40.909 0.00 0.00 0.00 5.68
159 160 3.982576 ACTTTGTACTTTTGAAGGCGG 57.017 42.857 0.00 0.00 0.00 6.13
161 162 5.891451 ACTCAACTTTGTACTTTTGAAGGC 58.109 37.500 0.00 0.00 0.00 4.35
162 163 7.083875 TGACTCAACTTTGTACTTTTGAAGG 57.916 36.000 0.00 0.00 0.00 3.46
163 164 9.573133 AAATGACTCAACTTTGTACTTTTGAAG 57.427 29.630 0.00 0.00 0.00 3.02
169 170 9.965824 CCAAATAAATGACTCAACTTTGTACTT 57.034 29.630 0.00 0.00 0.00 2.24
171 172 8.573035 TCCCAAATAAATGACTCAACTTTGTAC 58.427 33.333 0.00 0.00 0.00 2.90
174 175 6.582295 CGTCCCAAATAAATGACTCAACTTTG 59.418 38.462 0.00 0.00 0.00 2.77
175 176 6.294508 CCGTCCCAAATAAATGACTCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
178 179 4.698304 TCCGTCCCAAATAAATGACTCAAC 59.302 41.667 0.00 0.00 0.00 3.18
179 180 4.912586 TCCGTCCCAAATAAATGACTCAA 58.087 39.130 0.00 0.00 0.00 3.02
180 181 4.513442 CTCCGTCCCAAATAAATGACTCA 58.487 43.478 0.00 0.00 0.00 3.41
181 182 3.877508 CCTCCGTCCCAAATAAATGACTC 59.122 47.826 0.00 0.00 0.00 3.36
182 183 3.371595 CCCTCCGTCCCAAATAAATGACT 60.372 47.826 0.00 0.00 0.00 3.41
183 184 2.949644 CCCTCCGTCCCAAATAAATGAC 59.050 50.000 0.00 0.00 0.00 3.06
185 186 3.214328 CTCCCTCCGTCCCAAATAAATG 58.786 50.000 0.00 0.00 0.00 2.32
186 187 2.850568 ACTCCCTCCGTCCCAAATAAAT 59.149 45.455 0.00 0.00 0.00 1.40
188 189 1.961133 ACTCCCTCCGTCCCAAATAA 58.039 50.000 0.00 0.00 0.00 1.40
189 190 2.292389 TGTACTCCCTCCGTCCCAAATA 60.292 50.000 0.00 0.00 0.00 1.40
192 193 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
194 195 0.396695 TCATGTACTCCCTCCGTCCC 60.397 60.000 0.00 0.00 0.00 4.46
195 196 0.745468 GTCATGTACTCCCTCCGTCC 59.255 60.000 0.00 0.00 0.00 4.79
218 1693 4.388577 AATACTGCCACTTCCTTCCTTT 57.611 40.909 0.00 0.00 0.00 3.11
257 1732 2.801342 GCTTCTCCTAGCATTGACCTCG 60.801 54.545 0.00 0.00 40.89 4.63
260 1735 2.998316 AGCTTCTCCTAGCATTGACC 57.002 50.000 0.00 0.00 43.68 4.02
264 1739 6.241645 ACTAAACAAAGCTTCTCCTAGCATT 58.758 36.000 0.00 0.00 43.68 3.56
277 1752 3.125316 ACGATGCAGCTACTAAACAAAGC 59.875 43.478 0.00 0.00 36.48 3.51
281 1756 5.902681 AGATTACGATGCAGCTACTAAACA 58.097 37.500 0.00 0.00 0.00 2.83
294 1769 5.015733 GCACGAGTTTCAAAGATTACGATG 58.984 41.667 0.00 0.00 0.00 3.84
324 1799 2.041485 TGGAAGATTGTGGGCTTCATGA 59.959 45.455 0.00 0.00 41.69 3.07
326 1801 2.309755 TCTGGAAGATTGTGGGCTTCAT 59.690 45.455 0.00 0.00 38.67 2.57
327 1802 1.704628 TCTGGAAGATTGTGGGCTTCA 59.295 47.619 0.00 0.00 38.67 3.02
349 1824 5.389516 GCAACTTTATTTCGAGCGAAAGAGA 60.390 40.000 20.60 12.19 45.66 3.10
351 1826 4.212425 TGCAACTTTATTTCGAGCGAAAGA 59.788 37.500 20.60 14.91 45.66 2.52
352 1827 4.318332 GTGCAACTTTATTTCGAGCGAAAG 59.682 41.667 20.60 11.19 45.66 2.62
353 1828 4.215965 GTGCAACTTTATTTCGAGCGAAA 58.784 39.130 18.74 18.74 46.37 3.46
354 1829 3.663233 CGTGCAACTTTATTTCGAGCGAA 60.663 43.478 0.55 0.55 31.75 4.70
355 1830 2.159894 CGTGCAACTTTATTTCGAGCGA 60.160 45.455 0.00 0.00 31.75 4.93
358 1833 5.511088 ACTACGTGCAACTTTATTTCGAG 57.489 39.130 0.00 0.00 31.75 4.04
359 1834 7.405469 TTTACTACGTGCAACTTTATTTCGA 57.595 32.000 0.00 0.00 31.75 3.71
360 1835 8.478527 TTTTTACTACGTGCAACTTTATTTCG 57.521 30.769 0.00 0.00 31.75 3.46
382 1857 8.682936 ATGATACTAGATGCCGATTTCTTTTT 57.317 30.769 0.00 0.00 0.00 1.94
383 1858 7.933577 TGATGATACTAGATGCCGATTTCTTTT 59.066 33.333 0.00 0.00 0.00 2.27
384 1859 7.386299 GTGATGATACTAGATGCCGATTTCTTT 59.614 37.037 0.00 0.00 0.00 2.52
385 1860 6.870965 GTGATGATACTAGATGCCGATTTCTT 59.129 38.462 0.00 0.00 0.00 2.52
386 1861 6.015095 TGTGATGATACTAGATGCCGATTTCT 60.015 38.462 0.00 0.00 0.00 2.52
387 1862 6.159293 TGTGATGATACTAGATGCCGATTTC 58.841 40.000 0.00 0.00 0.00 2.17
388 1863 6.101650 TGTGATGATACTAGATGCCGATTT 57.898 37.500 0.00 0.00 0.00 2.17
389 1864 5.718146 CTGTGATGATACTAGATGCCGATT 58.282 41.667 0.00 0.00 0.00 3.34
390 1865 4.381398 GCTGTGATGATACTAGATGCCGAT 60.381 45.833 0.00 0.00 0.00 4.18
391 1866 3.057245 GCTGTGATGATACTAGATGCCGA 60.057 47.826 0.00 0.00 0.00 5.54
392 1867 3.249091 GCTGTGATGATACTAGATGCCG 58.751 50.000 0.00 0.00 0.00 5.69
393 1868 4.263018 TGCTGTGATGATACTAGATGCC 57.737 45.455 0.00 0.00 0.00 4.40
394 1869 5.930569 TCATTGCTGTGATGATACTAGATGC 59.069 40.000 0.00 0.00 0.00 3.91
395 1870 7.958053 TTCATTGCTGTGATGATACTAGATG 57.042 36.000 0.00 0.00 33.82 2.90
396 1871 7.989170 TGTTTCATTGCTGTGATGATACTAGAT 59.011 33.333 0.00 0.00 36.81 1.98
397 1872 7.330262 TGTTTCATTGCTGTGATGATACTAGA 58.670 34.615 0.00 0.00 36.81 2.43
398 1873 7.543947 TGTTTCATTGCTGTGATGATACTAG 57.456 36.000 12.83 0.00 36.81 2.57
399 1874 7.920160 TTGTTTCATTGCTGTGATGATACTA 57.080 32.000 12.83 6.71 36.81 1.82
400 1875 6.822667 TTGTTTCATTGCTGTGATGATACT 57.177 33.333 12.83 0.00 36.81 2.12
401 1876 6.034256 GCTTTGTTTCATTGCTGTGATGATAC 59.966 38.462 0.00 0.00 36.57 2.24
402 1877 6.094719 GCTTTGTTTCATTGCTGTGATGATA 58.905 36.000 0.00 0.00 33.82 2.15
403 1878 4.927425 GCTTTGTTTCATTGCTGTGATGAT 59.073 37.500 0.00 0.00 33.82 2.45
404 1879 4.202131 TGCTTTGTTTCATTGCTGTGATGA 60.202 37.500 0.00 0.00 0.00 2.92
405 1880 4.052608 TGCTTTGTTTCATTGCTGTGATG 58.947 39.130 0.00 0.00 0.00 3.07
406 1881 4.325028 TGCTTTGTTTCATTGCTGTGAT 57.675 36.364 0.00 0.00 0.00 3.06
407 1882 3.797451 TGCTTTGTTTCATTGCTGTGA 57.203 38.095 0.00 0.00 0.00 3.58
408 1883 3.302870 GCTTGCTTTGTTTCATTGCTGTG 60.303 43.478 0.00 0.00 0.00 3.66
409 1884 2.867975 GCTTGCTTTGTTTCATTGCTGT 59.132 40.909 0.00 0.00 0.00 4.40
410 1885 2.867368 TGCTTGCTTTGTTTCATTGCTG 59.133 40.909 0.00 0.00 0.00 4.41
411 1886 3.182341 TGCTTGCTTTGTTTCATTGCT 57.818 38.095 0.00 0.00 0.00 3.91
412 1887 3.063725 TGTTGCTTGCTTTGTTTCATTGC 59.936 39.130 0.00 0.00 0.00 3.56
413 1888 4.784079 GCTGTTGCTTGCTTTGTTTCATTG 60.784 41.667 0.00 0.00 36.03 2.82
414 1889 3.310501 GCTGTTGCTTGCTTTGTTTCATT 59.689 39.130 0.00 0.00 36.03 2.57
415 1890 2.867975 GCTGTTGCTTGCTTTGTTTCAT 59.132 40.909 0.00 0.00 36.03 2.57
416 1891 2.270047 GCTGTTGCTTGCTTTGTTTCA 58.730 42.857 0.00 0.00 36.03 2.69
417 1892 2.270047 TGCTGTTGCTTGCTTTGTTTC 58.730 42.857 0.00 0.00 40.48 2.78
418 1893 2.383368 TGCTGTTGCTTGCTTTGTTT 57.617 40.000 0.00 0.00 40.48 2.83
419 1894 2.383368 TTGCTGTTGCTTGCTTTGTT 57.617 40.000 0.00 0.00 40.48 2.83
420 1895 2.159071 TGATTGCTGTTGCTTGCTTTGT 60.159 40.909 0.00 0.00 40.48 2.83
421 1896 2.475818 TGATTGCTGTTGCTTGCTTTG 58.524 42.857 0.00 0.00 40.48 2.77
422 1897 2.894763 TGATTGCTGTTGCTTGCTTT 57.105 40.000 0.00 0.00 40.48 3.51
423 1898 2.894763 TTGATTGCTGTTGCTTGCTT 57.105 40.000 0.00 0.00 40.48 3.91
424 1899 2.750948 CTTTGATTGCTGTTGCTTGCT 58.249 42.857 0.00 0.00 40.48 3.91
425 1900 1.193874 GCTTTGATTGCTGTTGCTTGC 59.806 47.619 0.00 0.00 40.48 4.01
426 1901 2.220133 GTGCTTTGATTGCTGTTGCTTG 59.780 45.455 0.00 0.00 40.48 4.01
427 1902 2.476821 GTGCTTTGATTGCTGTTGCTT 58.523 42.857 0.00 0.00 40.48 3.91
428 1903 1.269936 GGTGCTTTGATTGCTGTTGCT 60.270 47.619 0.00 0.00 40.48 3.91
429 1904 1.142474 GGTGCTTTGATTGCTGTTGC 58.858 50.000 0.00 0.00 40.20 4.17
430 1905 2.034939 TGAGGTGCTTTGATTGCTGTTG 59.965 45.455 0.00 0.00 0.00 3.33
431 1906 2.309613 TGAGGTGCTTTGATTGCTGTT 58.690 42.857 0.00 0.00 0.00 3.16
432 1907 1.985473 TGAGGTGCTTTGATTGCTGT 58.015 45.000 0.00 0.00 0.00 4.40
433 1908 2.490509 TGATGAGGTGCTTTGATTGCTG 59.509 45.455 0.00 0.00 0.00 4.41
434 1909 2.753452 CTGATGAGGTGCTTTGATTGCT 59.247 45.455 0.00 0.00 0.00 3.91
435 1910 2.734492 GCTGATGAGGTGCTTTGATTGC 60.734 50.000 0.00 0.00 0.00 3.56
436 1911 2.477357 CGCTGATGAGGTGCTTTGATTG 60.477 50.000 0.00 0.00 0.00 2.67
437 1912 1.741706 CGCTGATGAGGTGCTTTGATT 59.258 47.619 0.00 0.00 0.00 2.57
438 1913 1.376543 CGCTGATGAGGTGCTTTGAT 58.623 50.000 0.00 0.00 0.00 2.57
439 1914 0.674581 CCGCTGATGAGGTGCTTTGA 60.675 55.000 0.00 0.00 0.00 2.69
440 1915 1.651240 CCCGCTGATGAGGTGCTTTG 61.651 60.000 0.00 0.00 0.00 2.77
441 1916 1.377725 CCCGCTGATGAGGTGCTTT 60.378 57.895 0.00 0.00 0.00 3.51
442 1917 2.270205 CCCGCTGATGAGGTGCTT 59.730 61.111 0.00 0.00 0.00 3.91
443 1918 3.005539 ACCCGCTGATGAGGTGCT 61.006 61.111 0.00 0.00 30.97 4.40
444 1919 2.821366 CACCCGCTGATGAGGTGC 60.821 66.667 0.00 0.00 44.21 5.01
446 1921 4.101448 GGCACCCGCTGATGAGGT 62.101 66.667 0.00 0.00 38.60 3.85
462 1937 3.567579 TTTCTCCTTGCAGCCCCGG 62.568 63.158 0.00 0.00 0.00 5.73
463 1938 2.034066 TTTCTCCTTGCAGCCCCG 59.966 61.111 0.00 0.00 0.00 5.73
464 1939 0.827507 TTGTTTCTCCTTGCAGCCCC 60.828 55.000 0.00 0.00 0.00 5.80
465 1940 0.600057 CTTGTTTCTCCTTGCAGCCC 59.400 55.000 0.00 0.00 0.00 5.19
466 1941 1.609208 TCTTGTTTCTCCTTGCAGCC 58.391 50.000 0.00 0.00 0.00 4.85
467 1942 2.606551 GCTTCTTGTTTCTCCTTGCAGC 60.607 50.000 0.00 0.00 0.00 5.25
468 1943 2.883386 AGCTTCTTGTTTCTCCTTGCAG 59.117 45.455 0.00 0.00 0.00 4.41
469 1944 2.936202 AGCTTCTTGTTTCTCCTTGCA 58.064 42.857 0.00 0.00 0.00 4.08
470 1945 3.438434 CCTAGCTTCTTGTTTCTCCTTGC 59.562 47.826 0.00 0.00 0.00 4.01
471 1946 4.646572 ACCTAGCTTCTTGTTTCTCCTTG 58.353 43.478 0.00 0.00 0.00 3.61
472 1947 4.263112 GGACCTAGCTTCTTGTTTCTCCTT 60.263 45.833 0.00 0.00 0.00 3.36
473 1948 3.262151 GGACCTAGCTTCTTGTTTCTCCT 59.738 47.826 0.00 0.00 0.00 3.69
474 1949 3.601435 GGACCTAGCTTCTTGTTTCTCC 58.399 50.000 0.00 0.00 0.00 3.71
475 1950 3.254892 CGGACCTAGCTTCTTGTTTCTC 58.745 50.000 0.00 0.00 0.00 2.87
476 1951 2.028020 CCGGACCTAGCTTCTTGTTTCT 60.028 50.000 0.00 0.00 0.00 2.52
477 1952 2.289506 ACCGGACCTAGCTTCTTGTTTC 60.290 50.000 9.46 0.00 0.00 2.78
478 1953 1.697982 ACCGGACCTAGCTTCTTGTTT 59.302 47.619 9.46 0.00 0.00 2.83
479 1954 1.002087 CACCGGACCTAGCTTCTTGTT 59.998 52.381 9.46 0.00 0.00 2.83
480 1955 0.608640 CACCGGACCTAGCTTCTTGT 59.391 55.000 9.46 0.00 0.00 3.16
481 1956 0.741221 GCACCGGACCTAGCTTCTTG 60.741 60.000 9.46 0.00 0.00 3.02
482 1957 1.192146 TGCACCGGACCTAGCTTCTT 61.192 55.000 9.46 0.00 0.00 2.52
483 1958 1.608717 CTGCACCGGACCTAGCTTCT 61.609 60.000 9.46 0.00 0.00 2.85
484 1959 1.153549 CTGCACCGGACCTAGCTTC 60.154 63.158 9.46 0.00 0.00 3.86
485 1960 2.660064 CCTGCACCGGACCTAGCTT 61.660 63.158 9.46 0.00 0.00 3.74
486 1961 3.077556 CCTGCACCGGACCTAGCT 61.078 66.667 9.46 0.00 0.00 3.32
487 1962 3.391382 ACCTGCACCGGACCTAGC 61.391 66.667 9.46 4.43 0.00 3.42
488 1963 2.579201 CACCTGCACCGGACCTAG 59.421 66.667 9.46 0.06 0.00 3.02
489 1964 3.000819 CCACCTGCACCGGACCTA 61.001 66.667 9.46 0.00 0.00 3.08
494 1969 3.185299 TTACCACCACCTGCACCGG 62.185 63.158 0.00 0.00 0.00 5.28
495 1970 1.964373 GTTACCACCACCTGCACCG 60.964 63.158 0.00 0.00 0.00 4.94
496 1971 0.466555 TTGTTACCACCACCTGCACC 60.467 55.000 0.00 0.00 0.00 5.01
497 1972 0.951558 CTTGTTACCACCACCTGCAC 59.048 55.000 0.00 0.00 0.00 4.57
498 1973 0.821711 GCTTGTTACCACCACCTGCA 60.822 55.000 0.00 0.00 0.00 4.41
499 1974 0.537371 AGCTTGTTACCACCACCTGC 60.537 55.000 0.00 0.00 0.00 4.85
500 1975 2.038557 AGTAGCTTGTTACCACCACCTG 59.961 50.000 0.00 0.00 0.00 4.00
501 1976 2.335933 AGTAGCTTGTTACCACCACCT 58.664 47.619 0.00 0.00 0.00 4.00
502 1977 2.812011 CAAGTAGCTTGTTACCACCACC 59.188 50.000 0.00 0.00 36.79 4.61
513 1988 8.366671 ACAAGAAAAGTACTACAAGTAGCTTG 57.633 34.615 7.14 11.68 45.85 4.01
514 1989 8.202137 TGACAAGAAAAGTACTACAAGTAGCTT 58.798 33.333 7.14 1.53 36.66 3.74
515 1990 7.723324 TGACAAGAAAAGTACTACAAGTAGCT 58.277 34.615 7.14 0.00 36.66 3.32
516 1991 7.116519 CCTGACAAGAAAAGTACTACAAGTAGC 59.883 40.741 7.14 0.00 36.66 3.58
517 1992 8.142551 ACCTGACAAGAAAAGTACTACAAGTAG 58.857 37.037 0.00 5.72 39.04 2.57
518 1993 8.015185 ACCTGACAAGAAAAGTACTACAAGTA 57.985 34.615 0.00 0.00 0.00 2.24
519 1994 6.885922 ACCTGACAAGAAAAGTACTACAAGT 58.114 36.000 0.00 0.00 0.00 3.16
520 1995 7.494625 TCAACCTGACAAGAAAAGTACTACAAG 59.505 37.037 0.00 0.00 0.00 3.16
521 1996 7.332557 TCAACCTGACAAGAAAAGTACTACAA 58.667 34.615 0.00 0.00 0.00 2.41
522 1997 6.880484 TCAACCTGACAAGAAAAGTACTACA 58.120 36.000 0.00 0.00 0.00 2.74
523 1998 7.208080 TCTCAACCTGACAAGAAAAGTACTAC 58.792 38.462 0.00 0.00 0.00 2.73
524 1999 7.356089 TCTCAACCTGACAAGAAAAGTACTA 57.644 36.000 0.00 0.00 0.00 1.82
525 2000 6.235231 TCTCAACCTGACAAGAAAAGTACT 57.765 37.500 0.00 0.00 0.00 2.73
526 2001 6.017852 CCTTCTCAACCTGACAAGAAAAGTAC 60.018 42.308 0.00 0.00 25.68 2.73
527 2002 6.055588 CCTTCTCAACCTGACAAGAAAAGTA 58.944 40.000 0.00 0.00 25.68 2.24
528 2003 4.884164 CCTTCTCAACCTGACAAGAAAAGT 59.116 41.667 0.00 0.00 25.68 2.66
529 2004 5.126067 TCCTTCTCAACCTGACAAGAAAAG 58.874 41.667 0.00 0.00 25.68 2.27
530 2005 5.110814 TCCTTCTCAACCTGACAAGAAAA 57.889 39.130 0.00 0.00 25.68 2.29
531 2006 4.771114 TCCTTCTCAACCTGACAAGAAA 57.229 40.909 0.00 0.00 25.68 2.52
532 2007 4.771114 TTCCTTCTCAACCTGACAAGAA 57.229 40.909 0.00 0.00 25.68 2.52
533 2008 4.451900 GTTTCCTTCTCAACCTGACAAGA 58.548 43.478 0.00 0.00 25.68 3.02
534 2009 3.565902 GGTTTCCTTCTCAACCTGACAAG 59.434 47.826 0.00 0.00 39.62 3.16
535 2010 3.551846 GGTTTCCTTCTCAACCTGACAA 58.448 45.455 0.00 0.00 39.62 3.18
536 2011 3.208747 GGTTTCCTTCTCAACCTGACA 57.791 47.619 0.00 0.00 39.62 3.58
541 2016 2.784347 CCTCAGGTTTCCTTCTCAACC 58.216 52.381 0.00 0.00 42.61 3.77
542 2017 2.155279 GCCTCAGGTTTCCTTCTCAAC 58.845 52.381 0.00 0.00 0.00 3.18
543 2018 1.774254 TGCCTCAGGTTTCCTTCTCAA 59.226 47.619 0.00 0.00 0.00 3.02
544 2019 1.072331 GTGCCTCAGGTTTCCTTCTCA 59.928 52.381 0.00 0.00 0.00 3.27
545 2020 1.611936 GGTGCCTCAGGTTTCCTTCTC 60.612 57.143 0.00 0.00 0.00 2.87
546 2021 0.402121 GGTGCCTCAGGTTTCCTTCT 59.598 55.000 0.00 0.00 0.00 2.85
547 2022 0.110486 TGGTGCCTCAGGTTTCCTTC 59.890 55.000 0.00 0.00 0.00 3.46
548 2023 0.555769 TTGGTGCCTCAGGTTTCCTT 59.444 50.000 0.00 0.00 0.00 3.36
549 2024 0.555769 TTTGGTGCCTCAGGTTTCCT 59.444 50.000 0.00 0.00 0.00 3.36
550 2025 1.408969 TTTTGGTGCCTCAGGTTTCC 58.591 50.000 0.00 0.00 0.00 3.13
551 2026 3.751479 AATTTTGGTGCCTCAGGTTTC 57.249 42.857 0.00 0.00 0.00 2.78
552 2027 3.711190 AGAAATTTTGGTGCCTCAGGTTT 59.289 39.130 0.00 0.00 0.00 3.27
553 2028 3.070015 CAGAAATTTTGGTGCCTCAGGTT 59.930 43.478 0.00 0.00 0.00 3.50
554 2029 2.629617 CAGAAATTTTGGTGCCTCAGGT 59.370 45.455 0.00 0.00 0.00 4.00
555 2030 2.611224 GCAGAAATTTTGGTGCCTCAGG 60.611 50.000 9.02 0.00 0.00 3.86
556 2031 2.298163 AGCAGAAATTTTGGTGCCTCAG 59.702 45.455 14.21 0.00 36.54 3.35
557 2032 2.318908 AGCAGAAATTTTGGTGCCTCA 58.681 42.857 14.21 0.00 36.54 3.86
558 2033 4.725790 ATAGCAGAAATTTTGGTGCCTC 57.274 40.909 14.21 0.00 36.54 4.70
559 2034 5.488262 AAATAGCAGAAATTTTGGTGCCT 57.512 34.783 14.21 7.44 36.54 4.75
560 2035 5.930405 CAAAATAGCAGAAATTTTGGTGCC 58.070 37.500 14.21 0.00 44.75 5.01
565 2040 6.427547 TGCCTTCCAAAATAGCAGAAATTTTG 59.572 34.615 12.22 12.22 46.60 2.44
566 2041 6.532826 TGCCTTCCAAAATAGCAGAAATTTT 58.467 32.000 0.00 0.00 37.08 1.82
567 2042 6.112927 TGCCTTCCAAAATAGCAGAAATTT 57.887 33.333 0.00 0.00 0.00 1.82
568 2043 5.743636 TGCCTTCCAAAATAGCAGAAATT 57.256 34.783 0.00 0.00 0.00 1.82
569 2044 5.743636 TTGCCTTCCAAAATAGCAGAAAT 57.256 34.783 0.00 0.00 34.45 2.17
570 2045 5.481105 CATTGCCTTCCAAAATAGCAGAAA 58.519 37.500 0.00 0.00 36.92 2.52
571 2046 4.621274 GCATTGCCTTCCAAAATAGCAGAA 60.621 41.667 0.00 0.00 36.92 3.02
572 2047 3.119029 GCATTGCCTTCCAAAATAGCAGA 60.119 43.478 0.00 0.00 36.92 4.26
573 2048 3.118884 AGCATTGCCTTCCAAAATAGCAG 60.119 43.478 4.70 0.00 36.92 4.24
574 2049 2.833338 AGCATTGCCTTCCAAAATAGCA 59.167 40.909 4.70 0.00 36.92 3.49
575 2050 3.192466 CAGCATTGCCTTCCAAAATAGC 58.808 45.455 4.70 0.00 36.92 2.97
576 2051 4.178540 CACAGCATTGCCTTCCAAAATAG 58.821 43.478 4.70 0.00 36.92 1.73
577 2052 3.055963 CCACAGCATTGCCTTCCAAAATA 60.056 43.478 4.70 0.00 36.92 1.40
578 2053 2.289819 CCACAGCATTGCCTTCCAAAAT 60.290 45.455 4.70 0.00 36.92 1.82
579 2054 1.070445 CCACAGCATTGCCTTCCAAAA 59.930 47.619 4.70 0.00 36.92 2.44
580 2055 0.680618 CCACAGCATTGCCTTCCAAA 59.319 50.000 4.70 0.00 36.92 3.28
581 2056 1.818959 GCCACAGCATTGCCTTCCAA 61.819 55.000 4.70 0.00 39.53 3.53
582 2057 2.277591 GCCACAGCATTGCCTTCCA 61.278 57.895 4.70 0.00 39.53 3.53
583 2058 2.575461 GCCACAGCATTGCCTTCC 59.425 61.111 4.70 0.00 39.53 3.46
584 2059 2.277591 TGGCCACAGCATTGCCTTC 61.278 57.895 0.00 0.00 45.56 3.46
585 2060 2.203669 TGGCCACAGCATTGCCTT 60.204 55.556 0.00 0.00 45.56 4.35
586 2061 2.993264 GTGGCCACAGCATTGCCT 60.993 61.111 31.23 0.00 45.56 4.75
587 2062 2.103339 AAAGTGGCCACAGCATTGCC 62.103 55.000 36.39 7.42 45.56 4.52
588 2063 0.947180 CAAAGTGGCCACAGCATTGC 60.947 55.000 36.39 8.24 42.56 3.56
589 2064 0.390124 ACAAAGTGGCCACAGCATTG 59.610 50.000 36.39 31.11 42.56 2.82
590 2065 0.390124 CACAAAGTGGCCACAGCATT 59.610 50.000 36.39 21.81 42.56 3.56
591 2066 0.467844 TCACAAAGTGGCCACAGCAT 60.468 50.000 36.39 17.11 42.56 3.79
592 2067 1.077140 TCACAAAGTGGCCACAGCA 60.077 52.632 36.39 13.69 42.56 4.41
593 2068 1.360192 GTCACAAAGTGGCCACAGC 59.640 57.895 36.39 11.57 31.24 4.40
594 2069 1.066002 CTTGTCACAAAGTGGCCACAG 59.934 52.381 36.39 26.36 37.35 3.66
595 2070 1.102154 CTTGTCACAAAGTGGCCACA 58.898 50.000 36.39 13.24 37.35 4.17
596 2071 1.065551 GTCTTGTCACAAAGTGGCCAC 59.934 52.381 29.22 29.22 37.35 5.01
597 2072 1.388547 GTCTTGTCACAAAGTGGCCA 58.611 50.000 0.00 0.00 37.35 5.36
598 2073 0.668535 GGTCTTGTCACAAAGTGGCC 59.331 55.000 0.00 0.00 37.35 5.36
599 2074 1.065551 GTGGTCTTGTCACAAAGTGGC 59.934 52.381 0.00 0.00 38.79 5.01
600 2075 2.355756 CTGTGGTCTTGTCACAAAGTGG 59.644 50.000 0.00 0.00 43.45 4.00
601 2076 2.355756 CCTGTGGTCTTGTCACAAAGTG 59.644 50.000 0.00 0.00 43.45 3.16
602 2077 2.643551 CCTGTGGTCTTGTCACAAAGT 58.356 47.619 0.00 0.00 43.45 2.66
603 2078 1.949525 CCCTGTGGTCTTGTCACAAAG 59.050 52.381 0.00 0.00 43.45 2.77
604 2079 2.021723 GCCCTGTGGTCTTGTCACAAA 61.022 52.381 0.00 0.00 43.45 2.83
605 2080 0.465460 GCCCTGTGGTCTTGTCACAA 60.465 55.000 0.00 0.00 43.45 3.33
606 2081 1.148273 GCCCTGTGGTCTTGTCACA 59.852 57.895 0.00 0.00 42.11 3.58
607 2082 1.600916 GGCCCTGTGGTCTTGTCAC 60.601 63.158 0.00 0.00 31.67 3.67
608 2083 1.640593 TTGGCCCTGTGGTCTTGTCA 61.641 55.000 0.00 0.00 37.08 3.58
609 2084 0.467290 TTTGGCCCTGTGGTCTTGTC 60.467 55.000 0.00 0.00 37.08 3.18
610 2085 0.755327 GTTTGGCCCTGTGGTCTTGT 60.755 55.000 0.00 0.00 37.08 3.16
611 2086 0.754957 TGTTTGGCCCTGTGGTCTTG 60.755 55.000 0.00 0.00 37.08 3.02
612 2087 0.468029 CTGTTTGGCCCTGTGGTCTT 60.468 55.000 0.00 0.00 37.08 3.01
613 2088 1.151450 CTGTTTGGCCCTGTGGTCT 59.849 57.895 0.00 0.00 37.08 3.85
614 2089 0.251341 ATCTGTTTGGCCCTGTGGTC 60.251 55.000 0.00 0.00 36.51 4.02
615 2090 0.251341 GATCTGTTTGGCCCTGTGGT 60.251 55.000 0.00 0.00 0.00 4.16
616 2091 0.251297 TGATCTGTTTGGCCCTGTGG 60.251 55.000 0.00 0.00 0.00 4.17
617 2092 1.475280 CATGATCTGTTTGGCCCTGTG 59.525 52.381 0.00 0.00 0.00 3.66
618 2093 1.617804 CCATGATCTGTTTGGCCCTGT 60.618 52.381 0.00 0.00 0.00 4.00
619 2094 1.108776 CCATGATCTGTTTGGCCCTG 58.891 55.000 0.00 0.00 0.00 4.45
620 2095 0.706433 ACCATGATCTGTTTGGCCCT 59.294 50.000 0.00 0.00 33.66 5.19
621 2096 0.819582 CACCATGATCTGTTTGGCCC 59.180 55.000 0.00 0.00 33.66 5.80
622 2097 1.747355 CTCACCATGATCTGTTTGGCC 59.253 52.381 0.00 0.00 33.66 5.36
623 2098 2.421424 GTCTCACCATGATCTGTTTGGC 59.579 50.000 0.00 0.00 33.66 4.52
624 2099 3.678289 TGTCTCACCATGATCTGTTTGG 58.322 45.455 0.00 0.00 36.56 3.28
625 2100 5.892160 AATGTCTCACCATGATCTGTTTG 57.108 39.130 0.00 0.00 0.00 2.93
626 2101 5.416952 GGAAATGTCTCACCATGATCTGTTT 59.583 40.000 0.00 0.00 0.00 2.83
627 2102 4.946157 GGAAATGTCTCACCATGATCTGTT 59.054 41.667 0.00 0.00 0.00 3.16
628 2103 4.226846 AGGAAATGTCTCACCATGATCTGT 59.773 41.667 0.00 0.00 0.00 3.41
629 2104 4.778579 AGGAAATGTCTCACCATGATCTG 58.221 43.478 0.00 0.00 0.00 2.90
630 2105 5.664908 ACTAGGAAATGTCTCACCATGATCT 59.335 40.000 0.00 0.00 0.00 2.75
631 2106 5.923204 ACTAGGAAATGTCTCACCATGATC 58.077 41.667 0.00 0.00 0.00 2.92
632 2107 5.965033 ACTAGGAAATGTCTCACCATGAT 57.035 39.130 0.00 0.00 0.00 2.45
633 2108 5.719563 TGTACTAGGAAATGTCTCACCATGA 59.280 40.000 0.00 0.00 0.00 3.07
634 2109 5.977635 TGTACTAGGAAATGTCTCACCATG 58.022 41.667 0.00 0.00 0.00 3.66
635 2110 6.613271 AGATGTACTAGGAAATGTCTCACCAT 59.387 38.462 0.00 0.00 0.00 3.55
636 2111 5.958380 AGATGTACTAGGAAATGTCTCACCA 59.042 40.000 0.00 0.00 0.00 4.17
637 2112 6.472686 AGATGTACTAGGAAATGTCTCACC 57.527 41.667 0.00 0.00 0.00 4.02
638 2113 7.548097 TGAAGATGTACTAGGAAATGTCTCAC 58.452 38.462 0.00 0.00 0.00 3.51
639 2114 7.615757 TCTGAAGATGTACTAGGAAATGTCTCA 59.384 37.037 0.00 0.00 0.00 3.27
640 2115 8.001881 TCTGAAGATGTACTAGGAAATGTCTC 57.998 38.462 0.00 0.00 0.00 3.36
641 2116 7.962995 TCTGAAGATGTACTAGGAAATGTCT 57.037 36.000 0.00 0.00 0.00 3.41
642 2117 9.606631 ATTTCTGAAGATGTACTAGGAAATGTC 57.393 33.333 0.00 0.00 34.00 3.06
643 2118 9.606631 GATTTCTGAAGATGTACTAGGAAATGT 57.393 33.333 0.00 0.00 34.64 2.71
644 2119 9.050601 GGATTTCTGAAGATGTACTAGGAAATG 57.949 37.037 0.00 0.00 34.64 2.32
645 2120 8.214364 GGGATTTCTGAAGATGTACTAGGAAAT 58.786 37.037 0.00 0.00 35.79 2.17
646 2121 7.403231 AGGGATTTCTGAAGATGTACTAGGAAA 59.597 37.037 0.00 0.00 0.00 3.13
647 2122 6.903534 AGGGATTTCTGAAGATGTACTAGGAA 59.096 38.462 0.00 0.00 0.00 3.36
648 2123 6.444704 AGGGATTTCTGAAGATGTACTAGGA 58.555 40.000 0.00 0.00 0.00 2.94
649 2124 6.739331 AGGGATTTCTGAAGATGTACTAGG 57.261 41.667 0.00 0.00 0.00 3.02
650 2125 9.137459 TCTTAGGGATTTCTGAAGATGTACTAG 57.863 37.037 0.00 0.00 0.00 2.57
651 2126 9.488762 TTCTTAGGGATTTCTGAAGATGTACTA 57.511 33.333 0.00 0.00 0.00 1.82
652 2127 7.979786 TCTTAGGGATTTCTGAAGATGTACT 57.020 36.000 0.00 0.00 0.00 2.73
653 2128 9.449719 TTTTCTTAGGGATTTCTGAAGATGTAC 57.550 33.333 0.00 0.00 0.00 2.90
654 2129 9.449719 GTTTTCTTAGGGATTTCTGAAGATGTA 57.550 33.333 0.00 0.00 0.00 2.29
655 2130 7.119846 CGTTTTCTTAGGGATTTCTGAAGATGT 59.880 37.037 0.00 0.00 0.00 3.06
656 2131 7.467623 CGTTTTCTTAGGGATTTCTGAAGATG 58.532 38.462 0.00 0.00 0.00 2.90
657 2132 6.094186 GCGTTTTCTTAGGGATTTCTGAAGAT 59.906 38.462 0.00 0.00 0.00 2.40
658 2133 5.411669 GCGTTTTCTTAGGGATTTCTGAAGA 59.588 40.000 0.00 0.00 0.00 2.87
659 2134 5.181245 TGCGTTTTCTTAGGGATTTCTGAAG 59.819 40.000 0.00 0.00 0.00 3.02
660 2135 5.067273 TGCGTTTTCTTAGGGATTTCTGAA 58.933 37.500 0.00 0.00 0.00 3.02
661 2136 4.647611 TGCGTTTTCTTAGGGATTTCTGA 58.352 39.130 0.00 0.00 0.00 3.27
662 2137 4.672801 GCTGCGTTTTCTTAGGGATTTCTG 60.673 45.833 0.00 0.00 0.00 3.02
663 2138 3.440522 GCTGCGTTTTCTTAGGGATTTCT 59.559 43.478 0.00 0.00 0.00 2.52
664 2139 3.190535 TGCTGCGTTTTCTTAGGGATTTC 59.809 43.478 0.00 0.00 0.00 2.17
665 2140 3.057526 GTGCTGCGTTTTCTTAGGGATTT 60.058 43.478 0.00 0.00 0.00 2.17
666 2141 2.488153 GTGCTGCGTTTTCTTAGGGATT 59.512 45.455 0.00 0.00 0.00 3.01
667 2142 2.084546 GTGCTGCGTTTTCTTAGGGAT 58.915 47.619 0.00 0.00 0.00 3.85
668 2143 1.519408 GTGCTGCGTTTTCTTAGGGA 58.481 50.000 0.00 0.00 0.00 4.20
669 2144 0.521735 GGTGCTGCGTTTTCTTAGGG 59.478 55.000 0.00 0.00 0.00 3.53
670 2145 1.234821 TGGTGCTGCGTTTTCTTAGG 58.765 50.000 0.00 0.00 0.00 2.69
671 2146 2.744202 AGATGGTGCTGCGTTTTCTTAG 59.256 45.455 0.00 0.00 0.00 2.18
672 2147 2.742053 GAGATGGTGCTGCGTTTTCTTA 59.258 45.455 0.00 0.00 0.00 2.10
673 2148 1.537202 GAGATGGTGCTGCGTTTTCTT 59.463 47.619 0.00 0.00 0.00 2.52
674 2149 1.160137 GAGATGGTGCTGCGTTTTCT 58.840 50.000 0.00 0.00 0.00 2.52
675 2150 0.179215 CGAGATGGTGCTGCGTTTTC 60.179 55.000 0.00 0.00 0.00 2.29
676 2151 0.884704 ACGAGATGGTGCTGCGTTTT 60.885 50.000 0.00 0.00 0.00 2.43
677 2152 0.884704 AACGAGATGGTGCTGCGTTT 60.885 50.000 0.00 0.00 41.74 3.60
678 2153 0.884704 AAACGAGATGGTGCTGCGTT 60.885 50.000 0.00 0.00 45.71 4.84
679 2154 0.037697 TAAACGAGATGGTGCTGCGT 60.038 50.000 0.00 0.00 36.68 5.24
680 2155 1.075542 TTAAACGAGATGGTGCTGCG 58.924 50.000 0.00 0.00 0.00 5.18
681 2156 3.552604 TTTTAAACGAGATGGTGCTGC 57.447 42.857 0.00 0.00 0.00 5.25
699 2174 4.416620 TCATGAAACGCGTTTGAGTTTTT 58.583 34.783 39.09 14.95 46.18 1.94
700 2175 4.022464 TCATGAAACGCGTTTGAGTTTT 57.978 36.364 39.09 16.15 46.18 2.43
702 2177 3.684103 TTCATGAAACGCGTTTGAGTT 57.316 38.095 39.09 17.78 40.00 3.01
703 2178 3.249799 TCATTCATGAAACGCGTTTGAGT 59.750 39.130 39.09 24.77 33.08 3.41
704 2179 3.809234 TCATTCATGAAACGCGTTTGAG 58.191 40.909 39.09 26.47 33.08 3.02
705 2180 3.887339 TCATTCATGAAACGCGTTTGA 57.113 38.095 39.09 32.33 33.08 2.69
770 2255 1.796459 GTACACATGTGTTCCGTCACC 59.204 52.381 34.66 10.43 41.83 4.02
793 2278 7.706159 TCATACAATGTTCAAACCTCATATGC 58.294 34.615 0.00 0.00 0.00 3.14
794 2279 7.859377 GCTCATACAATGTTCAAACCTCATATG 59.141 37.037 0.00 0.00 0.00 1.78
795 2280 7.557358 TGCTCATACAATGTTCAAACCTCATAT 59.443 33.333 0.00 0.00 0.00 1.78
796 2281 6.883756 TGCTCATACAATGTTCAAACCTCATA 59.116 34.615 0.00 0.00 0.00 2.15
797 2282 5.711506 TGCTCATACAATGTTCAAACCTCAT 59.288 36.000 0.00 0.00 0.00 2.90
798 2283 5.069318 TGCTCATACAATGTTCAAACCTCA 58.931 37.500 0.00 0.00 0.00 3.86
799 2284 5.392380 CCTGCTCATACAATGTTCAAACCTC 60.392 44.000 0.00 0.00 0.00 3.85
806 2294 8.243426 TGTAATTTTCCTGCTCATACAATGTTC 58.757 33.333 0.00 0.00 0.00 3.18
1690 3193 1.893808 CAAGTGGCGTGCAGTCCTT 60.894 57.895 5.83 0.00 0.00 3.36
1828 3336 3.407967 GGCAATGTCCTCCCCGGA 61.408 66.667 0.73 0.00 40.30 5.14
2207 3720 5.171339 ACCTGCAGTTCTGTAGATTTGAT 57.829 39.130 13.81 0.00 0.00 2.57
2242 3761 0.100325 TGCTTGCCAAACGTTGTGAG 59.900 50.000 0.00 0.00 0.00 3.51
2254 3773 1.662122 GCATTTGCTGTTATGCTTGCC 59.338 47.619 0.00 0.00 42.91 4.52
2383 4008 9.442047 CTCCTGTGATCTTAATTATTGGTATCC 57.558 37.037 0.00 0.00 0.00 2.59
2386 4011 9.434275 TCTCTCCTGTGATCTTAATTATTGGTA 57.566 33.333 0.00 0.00 0.00 3.25
2399 4024 7.389053 AGTTGTATGTTTTTCTCTCCTGTGATC 59.611 37.037 0.00 0.00 0.00 2.92
2423 4048 5.047235 GGAATATGCCGTCCTTACATAGAGT 60.047 44.000 0.00 0.00 30.31 3.24
2435 4067 1.388547 TTGCCAAGGAATATGCCGTC 58.611 50.000 0.00 0.00 0.00 4.79
2440 4072 6.267014 AGGATCATCTTTTGCCAAGGAATATG 59.733 38.462 0.00 0.00 0.00 1.78
2450 4082 7.934855 ATATGTCATAGGATCATCTTTTGCC 57.065 36.000 0.00 0.00 0.00 4.52
2467 4099 9.799106 TCTGTGAATCTAGATCTGTATATGTCA 57.201 33.333 5.51 0.00 0.00 3.58
2471 4103 9.252635 TGCATCTGTGAATCTAGATCTGTATAT 57.747 33.333 5.51 0.00 31.53 0.86
2488 4120 9.926751 CTTTAGTTATTGTAGATTGCATCTGTG 57.073 33.333 8.40 0.00 40.51 3.66
2502 4134 6.056884 TGTTGGGTTCGTCTTTAGTTATTGT 58.943 36.000 0.00 0.00 0.00 2.71
2537 4190 7.321908 TGTGGTTAAGTTTGTATACGCATCTA 58.678 34.615 0.00 0.00 0.00 1.98
2543 4196 8.746922 TTACTCTGTGGTTAAGTTTGTATACG 57.253 34.615 0.00 0.00 0.00 3.06
2568 4221 2.067365 ACTGGCGTTCCTTCCTTTTT 57.933 45.000 0.00 0.00 0.00 1.94
2626 4284 2.733593 GCAAGTTGCTGCTGCTGC 60.734 61.111 20.71 22.51 40.96 5.25
2639 4297 3.776340 TGCATGCTGATAATTGTGCAAG 58.224 40.909 20.33 0.00 39.36 4.01
2640 4298 3.870633 TGCATGCTGATAATTGTGCAA 57.129 38.095 20.33 0.00 39.36 4.08
2642 4300 2.861935 GGTTGCATGCTGATAATTGTGC 59.138 45.455 20.33 0.00 0.00 4.57
2645 4303 3.804786 TGGGTTGCATGCTGATAATTG 57.195 42.857 20.33 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.