Multiple sequence alignment - TraesCS3A01G365300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G365300 chr3A 100.000 5369 0 0 1 5369 614676173 614681541 0.000000e+00 9915
1 TraesCS3A01G365300 chr3A 95.270 296 12 2 5074 5369 732734525 732734818 8.140000e-128 468
2 TraesCS3A01G365300 chr3A 88.202 178 18 3 4606 4782 291796841 291796666 5.450000e-50 209
3 TraesCS3A01G365300 chr3D 92.604 2231 104 25 2207 4416 472115204 472117394 0.000000e+00 3149
4 TraesCS3A01G365300 chr3D 91.033 2208 91 34 32 2165 472113033 472115207 0.000000e+00 2881
5 TraesCS3A01G365300 chr3D 92.459 305 19 3 5067 5369 170543168 170543470 2.970000e-117 433
6 TraesCS3A01G365300 chr3D 92.000 300 18 4 4771 5067 472118221 472118517 2.990000e-112 416
7 TraesCS3A01G365300 chr3D 92.040 201 11 5 4410 4608 472118025 472118222 1.470000e-70 278
8 TraesCS3A01G365300 chr3D 89.222 167 17 1 4607 4773 338547111 338547276 1.960000e-49 207
9 TraesCS3A01G365300 chr3D 82.778 180 23 5 3729 3907 472197790 472197962 2.590000e-33 154
10 TraesCS3A01G365300 chr3B 89.501 2486 119 56 2195 4601 627713431 627715853 0.000000e+00 3014
11 TraesCS3A01G365300 chr3B 89.344 2196 121 47 32 2169 627711299 627713439 0.000000e+00 2654
12 TraesCS3A01G365300 chr3B 91.830 306 13 6 4771 5067 627715852 627716154 2.990000e-112 416
13 TraesCS3A01G365300 chr3B 83.333 180 22 5 3729 3907 627742081 627742253 5.570000e-35 159
14 TraesCS3A01G365300 chr7A 94.613 297 14 2 5074 5369 36904846 36905141 4.900000e-125 459
15 TraesCS3A01G365300 chr7A 90.230 174 16 1 4599 4772 443397624 443397796 5.410000e-55 226
16 TraesCS3A01G365300 chr2B 93.289 298 18 1 5074 5369 122442627 122442330 6.380000e-119 438
17 TraesCS3A01G365300 chr2B 92.282 298 21 1 5074 5369 31605932 31605635 6.430000e-114 422
18 TraesCS3A01G365300 chr6B 93.000 300 19 1 5072 5369 173799724 173799425 2.300000e-118 436
19 TraesCS3A01G365300 chr6D 92.929 297 21 0 5073 5369 84236143 84236439 2.970000e-117 433
20 TraesCS3A01G365300 chr6D 90.361 166 15 1 4607 4772 458986329 458986165 3.260000e-52 217
21 TraesCS3A01G365300 chr6D 89.820 167 16 1 4607 4773 25766767 25766932 4.210000e-51 213
22 TraesCS3A01G365300 chr2D 92.308 299 21 1 5073 5369 309064635 309064337 1.790000e-114 424
23 TraesCS3A01G365300 chr2D 87.912 182 19 3 4592 4772 376861471 376861292 1.520000e-50 211
24 TraesCS3A01G365300 chr7B 92.517 294 20 1 5078 5369 231724368 231724075 2.310000e-113 420
25 TraesCS3A01G365300 chr7B 87.709 179 16 6 4597 4772 119169196 119169371 2.540000e-48 204
26 TraesCS3A01G365300 chr7D 89.759 166 15 2 4607 4772 84594087 84594250 1.520000e-50 211
27 TraesCS3A01G365300 chr1D 89.759 166 16 1 4607 4772 29153474 29153310 1.520000e-50 211


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G365300 chr3A 614676173 614681541 5368 False 9915 9915 100.00000 1 5369 1 chr3A.!!$F1 5368
1 TraesCS3A01G365300 chr3D 472113033 472118517 5484 False 1681 3149 91.91925 32 5067 4 chr3D.!!$F4 5035
2 TraesCS3A01G365300 chr3B 627711299 627716154 4855 False 2028 3014 90.22500 32 5067 3 chr3B.!!$F2 5035

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.039618 GCCCTCCAAACCCATCTTCA 59.960 55.0 0.00 0.00 0.0 3.02 F
233 234 0.109132 CCTCCATTTTTGTCCGCTGC 60.109 55.0 0.00 0.00 0.0 5.25 F
1024 1074 0.114168 ATACAAGTTGCCTGGCCCAA 59.886 50.0 17.53 1.07 0.0 4.12 F
1159 1220 0.326264 TTCTTCTTCTGGCCAGCTCC 59.674 55.0 28.91 0.00 0.0 4.70 F
2365 2492 0.657840 GTCTGCCGCCATGTGTTATC 59.342 55.0 0.00 0.00 0.0 1.75 F
3987 4169 0.388520 GATTCGGTGTTTGGGCTTGC 60.389 55.0 0.00 0.00 0.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1875 1970 0.108615 GGCTAGATGACACACAGCGT 60.109 55.000 0.0 0.0 40.13 5.07 R
1913 2009 1.136305 TGCGAACTAGGTAGATGCCAC 59.864 52.381 0.0 0.0 0.00 5.01 R
2670 2810 0.107703 GGGATCTGCGTGGTGATTGA 60.108 55.000 0.0 0.0 0.00 2.57 R
2723 2863 0.773305 CCTCCCCATCCATCCATCCA 60.773 60.000 0.0 0.0 0.00 3.41 R
4140 4322 0.040958 GATCATGGTGAAATCGCGCC 60.041 55.000 0.0 0.0 38.91 6.53 R
5305 6137 0.033796 TCCGGTGTCGTATCCTTCCT 60.034 55.000 0.0 0.0 33.95 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.059982 GGCTTTGCCCTCCAAACC 58.940 61.111 0.00 0.00 44.06 3.27
30 31 2.583441 GGCTTTGCCCTCCAAACCC 61.583 63.158 0.00 0.00 44.06 4.11
37 38 0.039618 GCCCTCCAAACCCATCTTCA 59.960 55.000 0.00 0.00 0.00 3.02
53 54 0.845102 TTCAGGTCCCTTTCCCCTCC 60.845 60.000 0.00 0.00 0.00 4.30
75 76 2.551459 GGTGTCATCTTATGCTGGATGC 59.449 50.000 0.00 0.00 39.14 3.91
130 131 4.844065 CGGTTATGCGTGCGTGCG 62.844 66.667 0.00 0.00 37.81 5.34
138 139 3.017656 GCGTGCGTGCGTCCAATTA 62.018 57.895 3.11 0.00 0.00 1.40
233 234 0.109132 CCTCCATTTTTGTCCGCTGC 60.109 55.000 0.00 0.00 0.00 5.25
333 334 4.260170 CCTCCTGGCATAGATAATTGAGC 58.740 47.826 0.00 0.00 0.00 4.26
340 341 4.177026 GCATAGATAATTGAGCGTCGGAT 58.823 43.478 0.00 0.00 0.00 4.18
352 353 4.634004 TGAGCGTCGGATCAAATTATTGTT 59.366 37.500 0.00 0.00 35.24 2.83
379 381 5.102953 TGATGATACTTCAAACCCCTCAG 57.897 43.478 0.00 0.00 34.96 3.35
386 388 1.440618 TCAAACCCCTCAGTGGCTAA 58.559 50.000 0.00 0.00 0.00 3.09
418 420 1.006102 GTGCGGATGGGATACTCGG 60.006 63.158 0.00 0.00 0.00 4.63
453 455 5.265191 ACTACACCTCAGCTTTGAGAGATA 58.735 41.667 4.59 0.00 38.13 1.98
491 493 0.548682 AGGGATCAGCAGGGACACTT 60.549 55.000 0.00 0.00 0.00 3.16
532 534 7.820578 TCCATTTTGGAATGCAGAAATTTTT 57.179 28.000 0.00 0.00 45.00 1.94
560 575 8.299570 CCCATCCAATTATTTAGCTAACATGAC 58.700 37.037 5.45 0.00 0.00 3.06
585 600 7.010183 ACAGTTCGTCAGAAAACAATATATCCG 59.990 37.037 0.00 0.00 38.23 4.18
587 602 4.748102 TCGTCAGAAAACAATATATCCGGC 59.252 41.667 0.00 0.00 0.00 6.13
589 604 3.496884 TCAGAAAACAATATATCCGGCGC 59.503 43.478 0.00 0.00 0.00 6.53
687 705 0.537188 ATGATTCGACGGTGCTCCTT 59.463 50.000 2.85 0.00 0.00 3.36
720 738 1.027357 CCCAGGATTGATTTCGGCAG 58.973 55.000 0.00 0.00 0.00 4.85
744 762 3.504863 CAAATCAAAGCCATCCACGAAG 58.495 45.455 0.00 0.00 0.00 3.79
763 782 4.627058 GAAGGAGCTAATTAGTCAGAGGC 58.373 47.826 13.91 0.00 0.00 4.70
764 783 3.922375 AGGAGCTAATTAGTCAGAGGCT 58.078 45.455 13.91 3.74 0.00 4.58
765 784 3.640967 AGGAGCTAATTAGTCAGAGGCTG 59.359 47.826 13.91 0.00 0.00 4.85
872 917 4.187498 GCTTTACGTCGCGTCGCC 62.187 66.667 24.76 5.57 41.54 5.54
1022 1072 1.376609 CGATACAAGTTGCCTGGCCC 61.377 60.000 17.53 6.79 0.00 5.80
1023 1073 0.323360 GATACAAGTTGCCTGGCCCA 60.323 55.000 17.53 0.00 0.00 5.36
1024 1074 0.114168 ATACAAGTTGCCTGGCCCAA 59.886 50.000 17.53 1.07 0.00 4.12
1066 1124 1.203523 CTTTCCCTCTCTCTGACACCG 59.796 57.143 0.00 0.00 0.00 4.94
1094 1152 1.616865 TGAATCGTCTTCAACCTCGGT 59.383 47.619 1.55 0.00 0.00 4.69
1099 1160 1.269998 CGTCTTCAACCTCGGTCTTCT 59.730 52.381 0.00 0.00 0.00 2.85
1102 1163 2.299297 TCTTCAACCTCGGTCTTCTTCC 59.701 50.000 0.00 0.00 0.00 3.46
1159 1220 0.326264 TTCTTCTTCTGGCCAGCTCC 59.674 55.000 28.91 0.00 0.00 4.70
1206 1267 4.857509 ACACCTTCACAGTACTTCTCTC 57.142 45.455 0.00 0.00 0.00 3.20
1215 1276 5.941058 TCACAGTACTTCTCTCTACCTTCTG 59.059 44.000 0.00 0.00 0.00 3.02
1234 1295 1.221414 GTCCGTCCATGCATAAGAGC 58.779 55.000 0.00 0.00 0.00 4.09
1256 1317 8.891720 AGAGCTTTTATTCATTCAGTTCATCTC 58.108 33.333 0.00 0.00 0.00 2.75
1283 1344 9.817809 AAGTTCATAGATATAGAAGTTTTCGCA 57.182 29.630 0.00 0.00 32.58 5.10
1284 1345 9.817809 AGTTCATAGATATAGAAGTTTTCGCAA 57.182 29.630 0.00 0.00 34.02 4.85
1311 1372 3.172824 GAGAACTAGAGAAACTTCGCCG 58.827 50.000 0.00 0.00 0.00 6.46
1314 1375 1.612463 ACTAGAGAAACTTCGCCGTGT 59.388 47.619 0.00 0.00 0.00 4.49
1320 1381 1.392510 GAAACTTCGCCGTGTCCATAC 59.607 52.381 0.00 0.00 0.00 2.39
1379 1446 4.286297 TGCTTGACTTACAGTGGCTATT 57.714 40.909 0.00 0.00 0.00 1.73
1384 1451 6.763610 GCTTGACTTACAGTGGCTATTAAGAT 59.236 38.462 0.00 0.00 0.00 2.40
1427 1494 6.372659 TGTTCAGAAAACAGAGAATGGATAGC 59.627 38.462 0.00 0.00 0.00 2.97
1505 1592 7.057894 AGTTCTGTAGGAGAGTTCTATACCTG 58.942 42.308 0.00 0.00 32.90 4.00
1523 1610 5.499139 ACCTGTTTTTCATGTATATGCCG 57.501 39.130 0.00 0.00 34.21 5.69
1529 1616 6.815641 TGTTTTTCATGTATATGCCGCAAAAT 59.184 30.769 0.00 0.00 34.21 1.82
1530 1617 7.009999 TGTTTTTCATGTATATGCCGCAAAATC 59.990 33.333 0.00 0.00 34.21 2.17
1535 1622 5.422666 TGTATATGCCGCAAAATCTTCTG 57.577 39.130 0.00 0.00 0.00 3.02
1564 1659 3.945981 TCGTGCATACAGTCCTACAAA 57.054 42.857 0.00 0.00 0.00 2.83
1580 1675 1.597027 AAACCCTTGTCTGACGCCG 60.597 57.895 2.98 0.00 0.00 6.46
1795 1890 3.503748 CCCCAGCTACAGAAAACTTTCAG 59.496 47.826 5.07 0.00 39.61 3.02
1797 1892 4.214332 CCCAGCTACAGAAAACTTTCAGTC 59.786 45.833 3.79 0.00 37.88 3.51
1913 2009 5.205759 AGCCTCTTGTTTTTGAATCAAGG 57.794 39.130 0.00 0.00 38.99 3.61
1923 2019 5.643379 TTTTGAATCAAGGTGGCATCTAC 57.357 39.130 0.00 0.00 0.00 2.59
1975 2074 3.390135 TGACAGGCAGTTTAGTTTCTCG 58.610 45.455 0.00 0.00 0.00 4.04
2001 2100 7.380065 GGATTAGTTTGTCTGACTATCTTAGCG 59.620 40.741 9.51 0.00 30.30 4.26
2157 2256 1.557651 GACGGCCAAGTCTCGTTATC 58.442 55.000 2.24 0.00 38.09 1.75
2159 2258 1.135083 ACGGCCAAGTCTCGTTATCAG 60.135 52.381 2.24 0.00 32.95 2.90
2161 2260 2.098607 CGGCCAAGTCTCGTTATCAGTA 59.901 50.000 2.24 0.00 0.00 2.74
2162 2261 3.445857 GGCCAAGTCTCGTTATCAGTAC 58.554 50.000 0.00 0.00 0.00 2.73
2163 2262 3.119245 GGCCAAGTCTCGTTATCAGTACA 60.119 47.826 0.00 0.00 0.00 2.90
2164 2263 4.491676 GCCAAGTCTCGTTATCAGTACAA 58.508 43.478 0.00 0.00 0.00 2.41
2165 2264 4.563184 GCCAAGTCTCGTTATCAGTACAAG 59.437 45.833 0.00 0.00 0.00 3.16
2166 2265 5.710984 CCAAGTCTCGTTATCAGTACAAGT 58.289 41.667 0.00 0.00 0.00 3.16
2167 2266 6.157211 CCAAGTCTCGTTATCAGTACAAGTT 58.843 40.000 0.00 0.00 0.00 2.66
2168 2267 6.645415 CCAAGTCTCGTTATCAGTACAAGTTT 59.355 38.462 0.00 0.00 0.00 2.66
2169 2268 7.170998 CCAAGTCTCGTTATCAGTACAAGTTTT 59.829 37.037 0.00 0.00 0.00 2.43
2170 2269 8.548721 CAAGTCTCGTTATCAGTACAAGTTTTT 58.451 33.333 0.00 0.00 0.00 1.94
2191 2290 3.932545 TTTGCAAATGTCGCCAATAGT 57.067 38.095 8.05 0.00 0.00 2.12
2192 2291 5.378292 TTTTGCAAATGTCGCCAATAGTA 57.622 34.783 13.65 0.00 0.00 1.82
2193 2292 4.349663 TTGCAAATGTCGCCAATAGTAC 57.650 40.909 0.00 0.00 0.00 2.73
2198 2297 5.064198 GCAAATGTCGCCAATAGTACTACAA 59.936 40.000 4.31 0.00 0.00 2.41
2260 2359 1.609841 GCTAAACTTACCGGCCACTGT 60.610 52.381 0.00 0.00 0.00 3.55
2329 2436 2.276732 TTTCCTCTGGCAAGGACAAG 57.723 50.000 15.16 0.00 45.20 3.16
2346 2473 1.069765 AGTGTGGTCGGCACTTGAG 59.930 57.895 0.00 0.00 43.87 3.02
2365 2492 0.657840 GTCTGCCGCCATGTGTTATC 59.342 55.000 0.00 0.00 0.00 1.75
2369 2496 1.404748 TGCCGCCATGTGTTATCATTG 59.595 47.619 0.00 0.00 0.00 2.82
2370 2497 1.269206 GCCGCCATGTGTTATCATTGG 60.269 52.381 0.00 2.76 34.75 3.16
2380 2507 2.819019 TGTTATCATTGGTGTGGTGCTG 59.181 45.455 0.00 0.00 0.00 4.41
2440 2580 3.485431 CTGCAGAAGCTGACGCCG 61.485 66.667 8.42 0.00 41.71 6.46
2563 2703 2.185608 GCGCACTCCTCCTTCCTC 59.814 66.667 0.30 0.00 0.00 3.71
2668 2808 5.183713 CCCCGTCGTACTTGGTATAATCATA 59.816 44.000 0.00 0.00 0.00 2.15
2669 2809 6.294675 CCCCGTCGTACTTGGTATAATCATAA 60.295 42.308 0.00 0.00 0.00 1.90
2670 2810 7.318141 CCCGTCGTACTTGGTATAATCATAAT 58.682 38.462 0.00 0.00 0.00 1.28
2687 2827 4.751600 TCATAATCAATCACCACGCAGATC 59.248 41.667 0.00 0.00 0.00 2.75
2705 2845 2.806945 TCCCATTCCTGTCCATTGTC 57.193 50.000 0.00 0.00 0.00 3.18
2713 2853 5.762179 TTCCTGTCCATTGTCTGATAGTT 57.238 39.130 0.00 0.00 0.00 2.24
2716 2856 6.194967 TCCTGTCCATTGTCTGATAGTTCTA 58.805 40.000 0.00 0.00 0.00 2.10
2721 2861 9.987272 TGTCCATTGTCTGATAGTTCTATATTG 57.013 33.333 0.00 0.00 0.00 1.90
2776 2916 0.921896 ATCCTGGTTGTGGATGAGGG 59.078 55.000 0.00 0.00 42.22 4.30
2886 3026 1.302431 CACCATCAACGGCCTCACA 60.302 57.895 0.00 0.00 0.00 3.58
2924 3064 3.117794 GCGCAAGTATGTATTACCGTCA 58.882 45.455 0.30 0.00 41.68 4.35
2925 3065 3.181774 GCGCAAGTATGTATTACCGTCAG 59.818 47.826 0.30 0.00 41.68 3.51
2991 3142 5.163903 TGACATGATTCATTTGGTTCGTACG 60.164 40.000 9.53 9.53 0.00 3.67
2992 3143 4.932799 ACATGATTCATTTGGTTCGTACGA 59.067 37.500 15.28 15.28 0.00 3.43
3090 3241 1.439543 ACCTCTTCTTCAAGGTGGCT 58.560 50.000 0.00 0.00 44.26 4.75
3376 3527 1.002250 CAACAACTCGGACTCGACGG 61.002 60.000 0.00 0.00 40.88 4.79
3678 3829 3.710722 AAGGTGAGGAGCCTGCCG 61.711 66.667 0.00 0.00 36.30 5.69
3897 4048 2.173669 CATCCGCTTCGTCGCCAAT 61.174 57.895 0.00 0.00 0.00 3.16
3909 4060 1.208776 GTCGCCAATAACCCAGGTACT 59.791 52.381 0.00 0.00 43.88 2.73
3912 4063 2.681344 CGCCAATAACCCAGGTACTTTC 59.319 50.000 0.00 0.00 34.60 2.62
3913 4064 3.621461 CGCCAATAACCCAGGTACTTTCT 60.621 47.826 0.00 0.00 34.60 2.52
3929 4099 4.094476 ACTTTCTCCGTCCCTCTATTTCA 58.906 43.478 0.00 0.00 0.00 2.69
3954 4124 5.712152 CCAAACTATATGGGCCTTGATTC 57.288 43.478 4.53 0.00 34.15 2.52
3972 4146 9.994432 CCTTGATTCTAACAGTGTTAATGATTC 57.006 33.333 16.26 15.10 0.00 2.52
3987 4169 0.388520 GATTCGGTGTTTGGGCTTGC 60.389 55.000 0.00 0.00 0.00 4.01
4121 4303 1.227380 GATCTGCCCGTGTGCTAGG 60.227 63.158 0.00 0.00 0.00 3.02
4152 4334 1.511254 GTTTCCGGCGCGATTTCAC 60.511 57.895 12.10 0.00 0.00 3.18
4183 4365 7.312154 TCTTGCGTGCAAATTTACAGAATTAT 58.688 30.769 8.80 0.00 35.33 1.28
4201 4383 8.533965 CAGAATTATTTGTTCTTTGTGTGTGTG 58.466 33.333 0.00 0.00 33.82 3.82
4262 4444 1.374125 GGGCCGTTGGTTGATTTGC 60.374 57.895 0.00 0.00 0.00 3.68
4263 4445 1.374125 GGCCGTTGGTTGATTTGCC 60.374 57.895 0.00 0.00 0.00 4.52
4264 4446 1.732683 GCCGTTGGTTGATTTGCCG 60.733 57.895 0.00 0.00 0.00 5.69
4272 4456 3.587342 TTGATTTGCCGCGCGTGTC 62.587 57.895 29.95 17.36 0.00 3.67
4372 4556 7.518188 TCAATTTCAGAGGTTCTTTTCCTACT 58.482 34.615 0.00 0.00 35.20 2.57
4373 4557 7.445402 TCAATTTCAGAGGTTCTTTTCCTACTG 59.555 37.037 0.00 0.00 35.20 2.74
4382 4566 5.480205 GTTCTTTTCCTACTGGAGGTGTAG 58.520 45.833 5.68 2.05 46.76 2.74
4388 4572 6.836714 TTCCTACTGGAGGTGTAGATACTA 57.163 41.667 5.68 0.00 46.76 1.82
4404 4588 8.088365 TGTAGATACTATACACATGATGGTTGC 58.912 37.037 0.00 0.00 0.00 4.17
4464 5284 6.485313 TCTTCCTTTGGTGTAAATATATGCCG 59.515 38.462 0.00 0.00 0.00 5.69
4506 5326 3.314357 TCGTATCCTTCTGACGGTGTATG 59.686 47.826 0.00 1.84 37.20 2.39
4507 5327 3.066342 CGTATCCTTCTGACGGTGTATGT 59.934 47.826 0.00 0.00 33.01 2.29
4519 5341 7.226128 TCTGACGGTGTATGTAGATACTTACAG 59.774 40.741 15.26 11.75 43.19 2.74
4617 5440 7.513560 AGTATCTATTATCTACTCCCTCCGT 57.486 40.000 0.00 0.00 0.00 4.69
4618 5441 7.931046 AGTATCTATTATCTACTCCCTCCGTT 58.069 38.462 0.00 0.00 0.00 4.44
4619 5442 8.048514 AGTATCTATTATCTACTCCCTCCGTTC 58.951 40.741 0.00 0.00 0.00 3.95
4620 5443 6.451292 TCTATTATCTACTCCCTCCGTTCT 57.549 41.667 0.00 0.00 0.00 3.01
4621 5444 6.850234 TCTATTATCTACTCCCTCCGTTCTT 58.150 40.000 0.00 0.00 0.00 2.52
4622 5445 7.982252 TCTATTATCTACTCCCTCCGTTCTTA 58.018 38.462 0.00 0.00 0.00 2.10
4623 5446 8.443176 TCTATTATCTACTCCCTCCGTTCTTAA 58.557 37.037 0.00 0.00 0.00 1.85
4624 5447 7.909485 ATTATCTACTCCCTCCGTTCTTAAA 57.091 36.000 0.00 0.00 0.00 1.52
4625 5448 7.909485 TTATCTACTCCCTCCGTTCTTAAAT 57.091 36.000 0.00 0.00 0.00 1.40
4626 5449 5.593679 TCTACTCCCTCCGTTCTTAAATG 57.406 43.478 0.00 0.00 0.00 2.32
4627 5450 5.021458 TCTACTCCCTCCGTTCTTAAATGT 58.979 41.667 0.00 0.00 0.00 2.71
4628 5451 6.189859 TCTACTCCCTCCGTTCTTAAATGTA 58.810 40.000 0.00 0.00 0.00 2.29
4629 5452 5.750352 ACTCCCTCCGTTCTTAAATGTAA 57.250 39.130 0.00 0.00 0.00 2.41
4630 5453 5.731591 ACTCCCTCCGTTCTTAAATGTAAG 58.268 41.667 0.00 0.00 38.50 2.34
4631 5454 5.247792 ACTCCCTCCGTTCTTAAATGTAAGT 59.752 40.000 2.53 0.00 38.33 2.24
4632 5455 5.727434 TCCCTCCGTTCTTAAATGTAAGTC 58.273 41.667 2.53 0.00 38.33 3.01
4633 5456 5.482878 TCCCTCCGTTCTTAAATGTAAGTCT 59.517 40.000 2.53 0.00 38.33 3.24
4634 5457 6.013984 TCCCTCCGTTCTTAAATGTAAGTCTT 60.014 38.462 2.53 0.00 38.33 3.01
4635 5458 6.653740 CCCTCCGTTCTTAAATGTAAGTCTTT 59.346 38.462 2.53 0.00 38.33 2.52
4636 5459 7.174426 CCCTCCGTTCTTAAATGTAAGTCTTTT 59.826 37.037 2.53 0.00 38.33 2.27
4637 5460 8.565416 CCTCCGTTCTTAAATGTAAGTCTTTTT 58.435 33.333 2.53 0.00 38.33 1.94
4664 5487 9.601217 AGATATTTCAAGTGGACTACAACATAC 57.399 33.333 0.00 0.00 0.00 2.39
4665 5488 6.721571 ATTTCAAGTGGACTACAACATACG 57.278 37.500 0.00 0.00 0.00 3.06
4666 5489 5.456548 TTCAAGTGGACTACAACATACGA 57.543 39.130 0.00 0.00 0.00 3.43
4667 5490 5.456548 TCAAGTGGACTACAACATACGAA 57.543 39.130 0.00 0.00 0.00 3.85
4668 5491 6.032956 TCAAGTGGACTACAACATACGAAT 57.967 37.500 0.00 0.00 0.00 3.34
4669 5492 5.867174 TCAAGTGGACTACAACATACGAATG 59.133 40.000 0.00 0.00 39.17 2.67
4671 5494 6.519679 AGTGGACTACAACATACGAATGTA 57.480 37.500 0.00 0.00 45.79 2.29
4672 5495 7.108841 AGTGGACTACAACATACGAATGTAT 57.891 36.000 0.00 0.00 45.79 2.29
4702 5525 9.774742 GACATATTTTAAAGTGTGGATTCACTC 57.225 33.333 5.55 1.32 46.25 3.51
4703 5526 9.295825 ACATATTTTAAAGTGTGGATTCACTCA 57.704 29.630 5.55 0.00 46.25 3.41
4708 5531 8.870160 TTTAAAGTGTGGATTCACTCATTTTG 57.130 30.769 5.55 0.00 46.25 2.44
4709 5532 4.510038 AGTGTGGATTCACTCATTTTGC 57.490 40.909 5.55 0.00 44.07 3.68
4710 5533 4.147321 AGTGTGGATTCACTCATTTTGCT 58.853 39.130 5.55 0.00 44.07 3.91
4711 5534 4.586001 AGTGTGGATTCACTCATTTTGCTT 59.414 37.500 5.55 0.00 44.07 3.91
4712 5535 4.919754 GTGTGGATTCACTCATTTTGCTTC 59.080 41.667 5.55 0.00 43.94 3.86
4713 5536 4.161333 GTGGATTCACTCATTTTGCTTCG 58.839 43.478 0.00 0.00 40.58 3.79
4714 5537 3.820467 TGGATTCACTCATTTTGCTTCGT 59.180 39.130 0.00 0.00 0.00 3.85
4715 5538 4.083324 TGGATTCACTCATTTTGCTTCGTC 60.083 41.667 0.00 0.00 0.00 4.20
4716 5539 4.154918 GGATTCACTCATTTTGCTTCGTCT 59.845 41.667 0.00 0.00 0.00 4.18
4717 5540 4.472691 TTCACTCATTTTGCTTCGTCTG 57.527 40.909 0.00 0.00 0.00 3.51
4718 5541 3.466836 TCACTCATTTTGCTTCGTCTGT 58.533 40.909 0.00 0.00 0.00 3.41
4719 5542 4.627058 TCACTCATTTTGCTTCGTCTGTA 58.373 39.130 0.00 0.00 0.00 2.74
4720 5543 4.686091 TCACTCATTTTGCTTCGTCTGTAG 59.314 41.667 0.00 0.00 0.00 2.74
4721 5544 3.997021 ACTCATTTTGCTTCGTCTGTAGG 59.003 43.478 0.00 0.00 0.00 3.18
4722 5545 2.742053 TCATTTTGCTTCGTCTGTAGGC 59.258 45.455 0.00 0.00 0.00 3.93
4723 5546 2.248280 TTTTGCTTCGTCTGTAGGCA 57.752 45.000 0.00 0.00 0.00 4.75
4724 5547 1.508632 TTTGCTTCGTCTGTAGGCAC 58.491 50.000 0.00 0.00 32.47 5.01
4725 5548 0.679505 TTGCTTCGTCTGTAGGCACT 59.320 50.000 0.00 0.00 46.37 4.40
4726 5549 0.679505 TGCTTCGTCTGTAGGCACTT 59.320 50.000 0.00 0.00 41.75 3.16
4727 5550 1.071605 GCTTCGTCTGTAGGCACTTG 58.928 55.000 0.00 0.00 41.75 3.16
4728 5551 1.605712 GCTTCGTCTGTAGGCACTTGT 60.606 52.381 0.00 0.00 41.75 3.16
4729 5552 2.755650 CTTCGTCTGTAGGCACTTGTT 58.244 47.619 0.00 0.00 41.75 2.83
4730 5553 2.148916 TCGTCTGTAGGCACTTGTTG 57.851 50.000 0.00 0.00 41.75 3.33
4731 5554 1.684450 TCGTCTGTAGGCACTTGTTGA 59.316 47.619 0.00 0.00 41.75 3.18
4732 5555 2.101750 TCGTCTGTAGGCACTTGTTGAA 59.898 45.455 0.00 0.00 41.75 2.69
4733 5556 2.869801 CGTCTGTAGGCACTTGTTGAAA 59.130 45.455 0.00 0.00 41.75 2.69
4734 5557 3.498397 CGTCTGTAGGCACTTGTTGAAAT 59.502 43.478 0.00 0.00 41.75 2.17
4735 5558 4.377431 CGTCTGTAGGCACTTGTTGAAATC 60.377 45.833 0.00 0.00 41.75 2.17
4736 5559 4.757149 GTCTGTAGGCACTTGTTGAAATCT 59.243 41.667 0.00 0.00 41.75 2.40
4737 5560 4.756642 TCTGTAGGCACTTGTTGAAATCTG 59.243 41.667 0.00 0.00 41.75 2.90
4738 5561 4.460263 TGTAGGCACTTGTTGAAATCTGT 58.540 39.130 0.00 0.00 41.75 3.41
4739 5562 5.616270 TGTAGGCACTTGTTGAAATCTGTA 58.384 37.500 0.00 0.00 41.75 2.74
4740 5563 6.058833 TGTAGGCACTTGTTGAAATCTGTAA 58.941 36.000 0.00 0.00 41.75 2.41
4741 5564 6.544197 TGTAGGCACTTGTTGAAATCTGTAAA 59.456 34.615 0.00 0.00 41.75 2.01
4742 5565 6.463995 AGGCACTTGTTGAAATCTGTAAAA 57.536 33.333 0.00 0.00 27.25 1.52
4743 5566 6.872920 AGGCACTTGTTGAAATCTGTAAAAA 58.127 32.000 0.00 0.00 27.25 1.94
4744 5567 6.980397 AGGCACTTGTTGAAATCTGTAAAAAG 59.020 34.615 0.00 0.00 27.25 2.27
4745 5568 6.200854 GGCACTTGTTGAAATCTGTAAAAAGG 59.799 38.462 0.00 0.00 0.00 3.11
4746 5569 6.978080 GCACTTGTTGAAATCTGTAAAAAGGA 59.022 34.615 0.00 0.00 0.00 3.36
4747 5570 7.653311 GCACTTGTTGAAATCTGTAAAAAGGAT 59.347 33.333 0.00 0.00 0.00 3.24
4748 5571 9.533253 CACTTGTTGAAATCTGTAAAAAGGATT 57.467 29.630 0.00 0.00 0.00 3.01
4769 5592 9.780186 AGGATTTATATTTAGAAACGAAGGGAG 57.220 33.333 0.00 0.00 0.00 4.30
4823 5646 0.108804 CAGATTGGCTGCTTGGCTTG 60.109 55.000 0.00 0.00 42.34 4.01
4847 5677 2.238521 GGAGGGCAACAACTTGAATGA 58.761 47.619 0.00 0.00 39.74 2.57
4861 5691 3.744238 TGAATGAGAGTTCGTCACCAA 57.256 42.857 0.00 0.00 0.00 3.67
4875 5705 2.031683 GTCACCAAAGGACAAAGTCGTG 59.968 50.000 0.00 0.00 35.36 4.35
4917 5747 2.612212 GACTTGCCTCGTGTTTCTTTCA 59.388 45.455 0.00 0.00 0.00 2.69
4922 5753 2.223479 GCCTCGTGTTTCTTTCAGCAAA 60.223 45.455 0.00 0.00 0.00 3.68
4999 5831 2.261215 GGCTATAGGCTGCATTGGC 58.739 57.895 18.61 0.00 41.46 4.52
5048 5880 8.130307 CATCAATACGATGTTGACAGAATACA 57.870 34.615 0.00 0.00 45.61 2.29
5049 5881 8.603181 CATCAATACGATGTTGACAGAATACAA 58.397 33.333 0.00 0.00 45.61 2.41
5050 5882 8.185003 TCAATACGATGTTGACAGAATACAAG 57.815 34.615 0.00 0.00 31.07 3.16
5095 5927 3.767287 CGAAAAAGACTTTCGCCCC 57.233 52.632 0.00 0.00 43.52 5.80
5096 5928 0.110373 CGAAAAAGACTTTCGCCCCG 60.110 55.000 0.00 0.00 43.52 5.73
5097 5929 0.949397 GAAAAAGACTTTCGCCCCGT 59.051 50.000 0.00 0.00 0.00 5.28
5098 5930 1.335810 GAAAAAGACTTTCGCCCCGTT 59.664 47.619 0.00 0.00 0.00 4.44
5099 5931 1.395635 AAAAGACTTTCGCCCCGTTT 58.604 45.000 0.00 0.00 0.00 3.60
5100 5932 1.395635 AAAGACTTTCGCCCCGTTTT 58.604 45.000 0.00 0.00 0.00 2.43
5101 5933 2.259266 AAGACTTTCGCCCCGTTTTA 57.741 45.000 0.00 0.00 0.00 1.52
5102 5934 2.484742 AGACTTTCGCCCCGTTTTAT 57.515 45.000 0.00 0.00 0.00 1.40
5103 5935 3.615224 AGACTTTCGCCCCGTTTTATA 57.385 42.857 0.00 0.00 0.00 0.98
5104 5936 4.146745 AGACTTTCGCCCCGTTTTATAT 57.853 40.909 0.00 0.00 0.00 0.86
5105 5937 5.280654 AGACTTTCGCCCCGTTTTATATA 57.719 39.130 0.00 0.00 0.00 0.86
5106 5938 5.861727 AGACTTTCGCCCCGTTTTATATAT 58.138 37.500 0.00 0.00 0.00 0.86
5107 5939 6.996509 AGACTTTCGCCCCGTTTTATATATA 58.003 36.000 0.00 0.00 0.00 0.86
5108 5940 7.444299 AGACTTTCGCCCCGTTTTATATATAA 58.556 34.615 0.81 0.81 0.00 0.98
5109 5941 7.933033 AGACTTTCGCCCCGTTTTATATATAAA 59.067 33.333 12.90 12.90 0.00 1.40
5110 5942 8.091385 ACTTTCGCCCCGTTTTATATATAAAG 57.909 34.615 15.65 7.49 34.13 1.85
5111 5943 6.484818 TTCGCCCCGTTTTATATATAAAGC 57.515 37.500 17.54 17.54 34.13 3.51
5112 5944 5.549347 TCGCCCCGTTTTATATATAAAGCA 58.451 37.500 23.58 8.55 34.42 3.91
5113 5945 6.174760 TCGCCCCGTTTTATATATAAAGCAT 58.825 36.000 23.58 0.00 34.42 3.79
5114 5946 6.314400 TCGCCCCGTTTTATATATAAAGCATC 59.686 38.462 23.58 13.19 34.42 3.91
5115 5947 6.483687 GCCCCGTTTTATATATAAAGCATCG 58.516 40.000 23.58 20.04 34.42 3.84
5116 5948 6.314400 GCCCCGTTTTATATATAAAGCATCGA 59.686 38.462 23.58 6.83 34.42 3.59
5117 5949 7.675637 GCCCCGTTTTATATATAAAGCATCGAC 60.676 40.741 23.58 14.87 34.42 4.20
5118 5950 7.201582 CCCCGTTTTATATATAAAGCATCGACC 60.202 40.741 23.58 6.55 34.42 4.79
5119 5951 7.332430 CCCGTTTTATATATAAAGCATCGACCA 59.668 37.037 23.58 5.13 34.42 4.02
5120 5952 8.714179 CCGTTTTATATATAAAGCATCGACCAA 58.286 33.333 23.58 4.56 34.42 3.67
5121 5953 9.525007 CGTTTTATATATAAAGCATCGACCAAC 57.475 33.333 23.58 12.81 34.42 3.77
5125 5957 9.549078 TTATATATAAAGCATCGACCAACAACA 57.451 29.630 2.56 0.00 0.00 3.33
5126 5958 2.774439 AAAGCATCGACCAACAACAC 57.226 45.000 0.00 0.00 0.00 3.32
5127 5959 0.951558 AAGCATCGACCAACAACACC 59.048 50.000 0.00 0.00 0.00 4.16
5128 5960 0.889186 AGCATCGACCAACAACACCC 60.889 55.000 0.00 0.00 0.00 4.61
5129 5961 1.862602 GCATCGACCAACAACACCCC 61.863 60.000 0.00 0.00 0.00 4.95
5130 5962 1.302192 ATCGACCAACAACACCCCG 60.302 57.895 0.00 0.00 0.00 5.73
5131 5963 1.760479 ATCGACCAACAACACCCCGA 61.760 55.000 0.00 0.00 0.00 5.14
5132 5964 2.248835 CGACCAACAACACCCCGAC 61.249 63.158 0.00 0.00 0.00 4.79
5133 5965 1.153127 GACCAACAACACCCCGACA 60.153 57.895 0.00 0.00 0.00 4.35
5134 5966 1.441732 GACCAACAACACCCCGACAC 61.442 60.000 0.00 0.00 0.00 3.67
5135 5967 1.452289 CCAACAACACCCCGACACA 60.452 57.895 0.00 0.00 0.00 3.72
5136 5968 1.032657 CCAACAACACCCCGACACAA 61.033 55.000 0.00 0.00 0.00 3.33
5137 5969 0.811915 CAACAACACCCCGACACAAA 59.188 50.000 0.00 0.00 0.00 2.83
5138 5970 1.407258 CAACAACACCCCGACACAAAT 59.593 47.619 0.00 0.00 0.00 2.32
5139 5971 1.028905 ACAACACCCCGACACAAATG 58.971 50.000 0.00 0.00 0.00 2.32
5140 5972 0.318614 CAACACCCCGACACAAATGC 60.319 55.000 0.00 0.00 0.00 3.56
5141 5973 0.753479 AACACCCCGACACAAATGCA 60.753 50.000 0.00 0.00 0.00 3.96
5142 5974 1.285641 CACCCCGACACAAATGCAC 59.714 57.895 0.00 0.00 0.00 4.57
5143 5975 2.258013 ACCCCGACACAAATGCACG 61.258 57.895 0.00 0.00 0.00 5.34
5144 5976 2.126888 CCCGACACAAATGCACGC 60.127 61.111 0.00 0.00 0.00 5.34
5145 5977 2.126888 CCGACACAAATGCACGCC 60.127 61.111 0.00 0.00 0.00 5.68
5146 5978 2.636462 CGACACAAATGCACGCCA 59.364 55.556 0.00 0.00 0.00 5.69
5147 5979 1.725625 CGACACAAATGCACGCCAC 60.726 57.895 0.00 0.00 0.00 5.01
5148 5980 1.371635 GACACAAATGCACGCCACC 60.372 57.895 0.00 0.00 0.00 4.61
5149 5981 2.069465 GACACAAATGCACGCCACCA 62.069 55.000 0.00 0.00 0.00 4.17
5150 5982 1.661197 CACAAATGCACGCCACCAC 60.661 57.895 0.00 0.00 0.00 4.16
5151 5983 2.124060 ACAAATGCACGCCACCACA 61.124 52.632 0.00 0.00 0.00 4.17
5152 5984 1.067084 CAAATGCACGCCACCACAA 59.933 52.632 0.00 0.00 0.00 3.33
5153 5985 1.067250 AAATGCACGCCACCACAAC 59.933 52.632 0.00 0.00 0.00 3.32
5154 5986 1.670949 AAATGCACGCCACCACAACA 61.671 50.000 0.00 0.00 0.00 3.33
5155 5987 2.348605 AATGCACGCCACCACAACAC 62.349 55.000 0.00 0.00 0.00 3.32
5156 5988 3.513438 GCACGCCACCACAACACA 61.513 61.111 0.00 0.00 0.00 3.72
5157 5989 2.407210 CACGCCACCACAACACAC 59.593 61.111 0.00 0.00 0.00 3.82
5158 5990 3.199190 ACGCCACCACAACACACG 61.199 61.111 0.00 0.00 0.00 4.49
5159 5991 4.605967 CGCCACCACAACACACGC 62.606 66.667 0.00 0.00 0.00 5.34
5160 5992 3.513438 GCCACCACAACACACGCA 61.513 61.111 0.00 0.00 0.00 5.24
5161 5993 2.407210 CCACCACAACACACGCAC 59.593 61.111 0.00 0.00 0.00 5.34
5162 5994 2.402572 CCACCACAACACACGCACA 61.403 57.895 0.00 0.00 0.00 4.57
5163 5995 1.226267 CACCACAACACACGCACAC 60.226 57.895 0.00 0.00 0.00 3.82
5164 5996 1.672682 ACCACAACACACGCACACA 60.673 52.632 0.00 0.00 0.00 3.72
5165 5997 1.226267 CCACAACACACGCACACAC 60.226 57.895 0.00 0.00 0.00 3.82
5166 5998 1.226267 CACAACACACGCACACACC 60.226 57.895 0.00 0.00 0.00 4.16
5167 5999 2.403378 ACAACACACGCACACACCC 61.403 57.895 0.00 0.00 0.00 4.61
5168 6000 2.045829 AACACACGCACACACCCA 60.046 55.556 0.00 0.00 0.00 4.51
5169 6001 1.675972 AACACACGCACACACCCAA 60.676 52.632 0.00 0.00 0.00 4.12
5170 6002 1.653094 AACACACGCACACACCCAAG 61.653 55.000 0.00 0.00 0.00 3.61
5171 6003 2.515991 ACACGCACACACCCAAGG 60.516 61.111 0.00 0.00 0.00 3.61
5172 6004 3.964875 CACGCACACACCCAAGGC 61.965 66.667 0.00 0.00 0.00 4.35
5173 6005 4.497984 ACGCACACACCCAAGGCA 62.498 61.111 0.00 0.00 0.00 4.75
5174 6006 3.215568 CGCACACACCCAAGGCAA 61.216 61.111 0.00 0.00 0.00 4.52
5175 6007 2.730094 GCACACACCCAAGGCAAG 59.270 61.111 0.00 0.00 0.00 4.01
5176 6008 1.827789 GCACACACCCAAGGCAAGA 60.828 57.895 0.00 0.00 0.00 3.02
5177 6009 1.181098 GCACACACCCAAGGCAAGAT 61.181 55.000 0.00 0.00 0.00 2.40
5178 6010 1.886222 GCACACACCCAAGGCAAGATA 60.886 52.381 0.00 0.00 0.00 1.98
5179 6011 1.812571 CACACACCCAAGGCAAGATAC 59.187 52.381 0.00 0.00 0.00 2.24
5180 6012 1.423541 ACACACCCAAGGCAAGATACA 59.576 47.619 0.00 0.00 0.00 2.29
5181 6013 2.041620 ACACACCCAAGGCAAGATACAT 59.958 45.455 0.00 0.00 0.00 2.29
5182 6014 3.265737 ACACACCCAAGGCAAGATACATA 59.734 43.478 0.00 0.00 0.00 2.29
5183 6015 4.263727 ACACACCCAAGGCAAGATACATAA 60.264 41.667 0.00 0.00 0.00 1.90
5184 6016 4.336433 CACACCCAAGGCAAGATACATAAG 59.664 45.833 0.00 0.00 0.00 1.73
5185 6017 3.316308 CACCCAAGGCAAGATACATAAGC 59.684 47.826 0.00 0.00 0.00 3.09
5186 6018 2.549754 CCCAAGGCAAGATACATAAGCG 59.450 50.000 0.00 0.00 0.00 4.68
5187 6019 2.031682 CCAAGGCAAGATACATAAGCGC 60.032 50.000 0.00 0.00 0.00 5.92
5188 6020 2.874701 CAAGGCAAGATACATAAGCGCT 59.125 45.455 2.64 2.64 0.00 5.92
5189 6021 2.487934 AGGCAAGATACATAAGCGCTG 58.512 47.619 12.58 0.89 0.00 5.18
5190 6022 2.103094 AGGCAAGATACATAAGCGCTGA 59.897 45.455 12.58 2.35 0.00 4.26
5191 6023 2.478134 GGCAAGATACATAAGCGCTGAG 59.522 50.000 12.58 6.57 0.00 3.35
5192 6024 3.126831 GCAAGATACATAAGCGCTGAGT 58.873 45.455 12.58 12.96 0.00 3.41
5193 6025 4.299155 GCAAGATACATAAGCGCTGAGTA 58.701 43.478 12.58 14.90 0.00 2.59
5194 6026 4.149046 GCAAGATACATAAGCGCTGAGTAC 59.851 45.833 12.58 9.14 0.00 2.73
5195 6027 5.281727 CAAGATACATAAGCGCTGAGTACA 58.718 41.667 12.58 0.00 0.00 2.90
5196 6028 5.114785 AGATACATAAGCGCTGAGTACAG 57.885 43.478 12.58 0.00 45.91 2.74
5206 6038 1.512926 CTGAGTACAGCAACACCACC 58.487 55.000 0.00 0.00 37.33 4.61
5207 6039 0.107831 TGAGTACAGCAACACCACCC 59.892 55.000 0.00 0.00 0.00 4.61
5208 6040 0.605589 GAGTACAGCAACACCACCCC 60.606 60.000 0.00 0.00 0.00 4.95
5209 6041 1.149627 GTACAGCAACACCACCCCA 59.850 57.895 0.00 0.00 0.00 4.96
5210 6042 0.466555 GTACAGCAACACCACCCCAA 60.467 55.000 0.00 0.00 0.00 4.12
5211 6043 0.259065 TACAGCAACACCACCCCAAA 59.741 50.000 0.00 0.00 0.00 3.28
5212 6044 1.326951 ACAGCAACACCACCCCAAAC 61.327 55.000 0.00 0.00 0.00 2.93
5213 6045 1.042559 CAGCAACACCACCCCAAACT 61.043 55.000 0.00 0.00 0.00 2.66
5214 6046 0.553819 AGCAACACCACCCCAAACTA 59.446 50.000 0.00 0.00 0.00 2.24
5215 6047 0.671796 GCAACACCACCCCAAACTAC 59.328 55.000 0.00 0.00 0.00 2.73
5216 6048 2.024825 GCAACACCACCCCAAACTACA 61.025 52.381 0.00 0.00 0.00 2.74
5217 6049 2.379972 CAACACCACCCCAAACTACAA 58.620 47.619 0.00 0.00 0.00 2.41
5218 6050 2.358322 ACACCACCCCAAACTACAAG 57.642 50.000 0.00 0.00 0.00 3.16
5219 6051 1.847737 ACACCACCCCAAACTACAAGA 59.152 47.619 0.00 0.00 0.00 3.02
5220 6052 2.158667 ACACCACCCCAAACTACAAGAG 60.159 50.000 0.00 0.00 0.00 2.85
5221 6053 1.202891 ACCACCCCAAACTACAAGAGC 60.203 52.381 0.00 0.00 0.00 4.09
5222 6054 1.202879 CCACCCCAAACTACAAGAGCA 60.203 52.381 0.00 0.00 0.00 4.26
5223 6055 2.154462 CACCCCAAACTACAAGAGCAG 58.846 52.381 0.00 0.00 0.00 4.24
5224 6056 1.774856 ACCCCAAACTACAAGAGCAGT 59.225 47.619 0.00 0.00 0.00 4.40
5225 6057 2.224548 ACCCCAAACTACAAGAGCAGTC 60.225 50.000 0.00 0.00 0.00 3.51
5226 6058 2.069273 CCCAAACTACAAGAGCAGTCG 58.931 52.381 0.00 0.00 0.00 4.18
5227 6059 2.069273 CCAAACTACAAGAGCAGTCGG 58.931 52.381 0.00 0.00 0.00 4.79
5228 6060 2.069273 CAAACTACAAGAGCAGTCGGG 58.931 52.381 0.00 0.00 0.00 5.14
5229 6061 1.339097 AACTACAAGAGCAGTCGGGT 58.661 50.000 0.00 0.00 0.00 5.28
5230 6062 0.889306 ACTACAAGAGCAGTCGGGTC 59.111 55.000 0.00 0.00 44.43 4.46
5231 6063 0.173708 CTACAAGAGCAGTCGGGTCC 59.826 60.000 0.00 0.00 45.21 4.46
5232 6064 0.251653 TACAAGAGCAGTCGGGTCCT 60.252 55.000 0.00 0.00 45.21 3.85
5233 6065 1.216710 CAAGAGCAGTCGGGTCCTC 59.783 63.158 0.00 0.00 45.21 3.71
5234 6066 2.344203 AAGAGCAGTCGGGTCCTCG 61.344 63.158 0.00 0.00 45.21 4.63
5235 6067 2.750637 GAGCAGTCGGGTCCTCGA 60.751 66.667 0.00 0.00 38.08 4.04
5244 6076 3.045142 GGTCCTCGACCGTGAACA 58.955 61.111 0.00 0.00 43.14 3.18
5245 6077 1.372623 GGTCCTCGACCGTGAACAC 60.373 63.158 0.00 0.00 43.14 3.32
5255 6087 2.656007 GTGAACACGACACCGCGA 60.656 61.111 8.23 0.00 39.95 5.87
5256 6088 2.104530 TGAACACGACACCGCGAA 59.895 55.556 8.23 0.00 39.95 4.70
5257 6089 1.518792 TGAACACGACACCGCGAAA 60.519 52.632 8.23 0.00 39.95 3.46
5258 6090 1.082679 TGAACACGACACCGCGAAAA 61.083 50.000 8.23 0.00 39.95 2.29
5259 6091 0.382636 GAACACGACACCGCGAAAAG 60.383 55.000 8.23 0.00 39.95 2.27
5260 6092 0.806884 AACACGACACCGCGAAAAGA 60.807 50.000 8.23 0.00 39.95 2.52
5261 6093 0.599204 ACACGACACCGCGAAAAGAT 60.599 50.000 8.23 0.00 39.95 2.40
5262 6094 0.179250 CACGACACCGCGAAAAGATG 60.179 55.000 8.23 0.00 39.95 2.90
5263 6095 0.319211 ACGACACCGCGAAAAGATGA 60.319 50.000 8.23 0.00 39.95 2.92
5264 6096 0.787787 CGACACCGCGAAAAGATGAA 59.212 50.000 8.23 0.00 0.00 2.57
5265 6097 1.201812 CGACACCGCGAAAAGATGAAG 60.202 52.381 8.23 0.00 0.00 3.02
5266 6098 0.517316 ACACCGCGAAAAGATGAAGC 59.483 50.000 8.23 0.00 0.00 3.86
5267 6099 0.798776 CACCGCGAAAAGATGAAGCT 59.201 50.000 8.23 0.00 0.00 3.74
5268 6100 0.798776 ACCGCGAAAAGATGAAGCTG 59.201 50.000 8.23 0.00 0.00 4.24
5269 6101 0.522076 CCGCGAAAAGATGAAGCTGC 60.522 55.000 8.23 0.00 0.00 5.25
5270 6102 0.166597 CGCGAAAAGATGAAGCTGCA 59.833 50.000 0.00 0.00 0.00 4.41
5271 6103 1.202110 CGCGAAAAGATGAAGCTGCAT 60.202 47.619 6.99 6.99 0.00 3.96
5272 6104 2.030823 CGCGAAAAGATGAAGCTGCATA 59.969 45.455 7.34 0.00 0.00 3.14
5273 6105 3.303593 CGCGAAAAGATGAAGCTGCATAT 60.304 43.478 7.34 0.05 0.00 1.78
5274 6106 3.973135 GCGAAAAGATGAAGCTGCATATG 59.027 43.478 7.34 0.00 0.00 1.78
5275 6107 4.260907 GCGAAAAGATGAAGCTGCATATGA 60.261 41.667 7.34 0.00 0.00 2.15
5276 6108 5.203370 CGAAAAGATGAAGCTGCATATGAC 58.797 41.667 7.34 0.00 0.00 3.06
5277 6109 4.808077 AAAGATGAAGCTGCATATGACG 57.192 40.909 7.34 0.00 0.00 4.35
5278 6110 3.740631 AGATGAAGCTGCATATGACGA 57.259 42.857 7.34 0.00 0.00 4.20
5279 6111 4.063998 AGATGAAGCTGCATATGACGAA 57.936 40.909 7.34 0.00 0.00 3.85
5280 6112 3.806521 AGATGAAGCTGCATATGACGAAC 59.193 43.478 7.34 0.00 0.00 3.95
5281 6113 2.279741 TGAAGCTGCATATGACGAACC 58.720 47.619 6.97 0.00 0.00 3.62
5282 6114 1.258982 GAAGCTGCATATGACGAACCG 59.741 52.381 6.97 0.00 0.00 4.44
5283 6115 0.175760 AGCTGCATATGACGAACCGT 59.824 50.000 6.97 0.00 45.10 4.83
5284 6116 0.301687 GCTGCATATGACGAACCGTG 59.698 55.000 6.97 0.00 41.37 4.94
5285 6117 0.930310 CTGCATATGACGAACCGTGG 59.070 55.000 6.97 0.00 41.37 4.94
5286 6118 0.461163 TGCATATGACGAACCGTGGG 60.461 55.000 6.97 0.00 41.37 4.61
5287 6119 1.772063 GCATATGACGAACCGTGGGC 61.772 60.000 6.97 0.00 41.37 5.36
5288 6120 0.179084 CATATGACGAACCGTGGGCT 60.179 55.000 0.00 0.00 41.37 5.19
5289 6121 0.539986 ATATGACGAACCGTGGGCTT 59.460 50.000 0.00 0.00 41.37 4.35
5290 6122 0.108520 TATGACGAACCGTGGGCTTC 60.109 55.000 0.00 0.00 41.37 3.86
5291 6123 2.029964 GACGAACCGTGGGCTTCA 59.970 61.111 0.00 0.00 41.37 3.02
5292 6124 1.595929 GACGAACCGTGGGCTTCAA 60.596 57.895 0.00 0.00 41.37 2.69
5293 6125 1.566018 GACGAACCGTGGGCTTCAAG 61.566 60.000 0.00 0.00 41.37 3.02
5295 6127 2.597510 AACCGTGGGCTTCAAGGC 60.598 61.111 1.26 1.26 46.89 4.35
5299 6131 3.365265 GTGGGCTTCAAGGCGGTG 61.365 66.667 4.63 0.00 42.43 4.94
5310 6142 2.747855 GGCGGTGCCTTCAGGAAG 60.748 66.667 0.00 2.01 46.69 3.46
5321 6153 3.166489 CTTCAGGAAGGATACGACACC 57.834 52.381 1.01 0.00 46.39 4.16
5322 6154 1.100510 TCAGGAAGGATACGACACCG 58.899 55.000 0.00 0.00 46.39 4.94
5323 6155 0.102481 CAGGAAGGATACGACACCGG 59.898 60.000 0.00 0.00 46.39 5.28
5324 6156 0.033796 AGGAAGGATACGACACCGGA 60.034 55.000 9.46 0.00 46.39 5.14
5325 6157 0.384669 GGAAGGATACGACACCGGAG 59.615 60.000 9.46 1.26 46.39 4.63
5326 6158 0.248949 GAAGGATACGACACCGGAGC 60.249 60.000 9.46 0.00 46.39 4.70
5327 6159 2.001361 AAGGATACGACACCGGAGCG 62.001 60.000 9.46 11.45 46.39 5.03
5328 6160 2.654404 GATACGACACCGGAGCGC 60.654 66.667 9.46 0.00 40.78 5.92
5329 6161 4.203076 ATACGACACCGGAGCGCC 62.203 66.667 9.46 0.00 40.78 6.53
5349 6181 4.135153 CACGGCCCGACCTGAGAG 62.135 72.222 11.71 0.00 35.61 3.20
5350 6182 4.680537 ACGGCCCGACCTGAGAGT 62.681 66.667 11.71 0.00 35.61 3.24
5351 6183 3.827898 CGGCCCGACCTGAGAGTC 61.828 72.222 0.00 0.00 35.61 3.36
5352 6184 2.680352 GGCCCGACCTGAGAGTCA 60.680 66.667 0.00 0.00 36.52 3.41
5353 6185 2.716017 GGCCCGACCTGAGAGTCAG 61.716 68.421 0.00 0.00 43.91 3.51
5363 6195 2.704190 TGAGAGTCAGAGTTTCCCCT 57.296 50.000 0.00 0.00 0.00 4.79
5364 6196 3.827817 TGAGAGTCAGAGTTTCCCCTA 57.172 47.619 0.00 0.00 0.00 3.53
5365 6197 3.702792 TGAGAGTCAGAGTTTCCCCTAG 58.297 50.000 0.00 0.00 0.00 3.02
5366 6198 3.333980 TGAGAGTCAGAGTTTCCCCTAGA 59.666 47.826 0.00 0.00 0.00 2.43
5367 6199 3.951680 GAGAGTCAGAGTTTCCCCTAGAG 59.048 52.174 0.00 0.00 0.00 2.43
5368 6200 2.429250 GAGTCAGAGTTTCCCCTAGAGC 59.571 54.545 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 1.194121 ATGGGTTTGGAGGGCAAAGC 61.194 55.000 0.00 0.00 38.76 3.51
14 15 0.897621 GATGGGTTTGGAGGGCAAAG 59.102 55.000 0.00 0.00 0.00 2.77
15 16 0.486879 AGATGGGTTTGGAGGGCAAA 59.513 50.000 0.00 0.00 0.00 3.68
16 17 0.486879 AAGATGGGTTTGGAGGGCAA 59.513 50.000 0.00 0.00 0.00 4.52
17 18 0.039618 GAAGATGGGTTTGGAGGGCA 59.960 55.000 0.00 0.00 0.00 5.36
18 19 0.039618 TGAAGATGGGTTTGGAGGGC 59.960 55.000 0.00 0.00 0.00 5.19
19 20 1.341383 CCTGAAGATGGGTTTGGAGGG 60.341 57.143 0.00 0.00 0.00 4.30
20 21 1.355720 ACCTGAAGATGGGTTTGGAGG 59.644 52.381 0.00 0.00 30.80 4.30
21 22 2.619074 GGACCTGAAGATGGGTTTGGAG 60.619 54.545 0.00 0.00 35.77 3.86
22 23 1.354368 GGACCTGAAGATGGGTTTGGA 59.646 52.381 0.00 0.00 35.77 3.53
23 24 1.616994 GGGACCTGAAGATGGGTTTGG 60.617 57.143 0.00 0.00 35.77 3.28
24 25 1.355720 AGGGACCTGAAGATGGGTTTG 59.644 52.381 0.00 0.00 35.77 2.93
25 26 1.760405 AGGGACCTGAAGATGGGTTT 58.240 50.000 0.00 0.00 35.77 3.27
26 27 1.760405 AAGGGACCTGAAGATGGGTT 58.240 50.000 0.00 0.00 35.77 4.11
27 28 1.636003 GAAAGGGACCTGAAGATGGGT 59.364 52.381 0.00 0.00 38.70 4.51
28 29 1.064389 GGAAAGGGACCTGAAGATGGG 60.064 57.143 0.00 0.00 0.00 4.00
29 30 1.064389 GGGAAAGGGACCTGAAGATGG 60.064 57.143 0.00 0.00 0.00 3.51
30 31 1.064389 GGGGAAAGGGACCTGAAGATG 60.064 57.143 0.00 0.00 0.00 2.90
37 38 2.285442 CGGAGGGGAAAGGGACCT 60.285 66.667 0.00 0.00 37.31 3.85
53 54 2.602257 TCCAGCATAAGATGACACCG 57.398 50.000 0.00 0.00 31.30 4.94
138 139 3.175710 AGGAACACGCCCAACCCT 61.176 61.111 0.00 0.00 0.00 4.34
233 234 1.343821 GATGCGCTTAACACGTCGG 59.656 57.895 9.73 0.00 0.00 4.79
333 334 8.547894 TCATCTAAACAATAATTTGATCCGACG 58.452 33.333 0.00 0.00 36.64 5.12
352 353 7.127186 TGAGGGGTTTGAAGTATCATCATCTAA 59.873 37.037 0.00 0.00 34.96 2.10
360 361 3.009033 CCACTGAGGGGTTTGAAGTATCA 59.991 47.826 0.00 0.00 0.00 2.15
361 362 3.610911 CCACTGAGGGGTTTGAAGTATC 58.389 50.000 0.00 0.00 0.00 2.24
363 364 1.073284 GCCACTGAGGGGTTTGAAGTA 59.927 52.381 1.17 0.00 38.09 2.24
379 381 2.275318 CTGAACTAGCAGCTTAGCCAC 58.725 52.381 0.00 0.00 34.23 5.01
386 388 1.079543 CGCACCTGAACTAGCAGCT 60.080 57.895 0.00 0.00 34.56 4.24
418 420 1.475682 AGGTGTAGTAGCGTACAAGCC 59.524 52.381 0.00 0.00 34.69 4.35
453 455 7.451255 TGATCCCTCATTTGTGTCAATAAAAGT 59.549 33.333 0.00 0.00 0.00 2.66
491 493 7.094248 CCAAAATGGACTAATCACATGTCTCAA 60.094 37.037 0.00 0.00 40.96 3.02
532 534 8.859090 CATGTTAGCTAAATAATTGGATGGGAA 58.141 33.333 7.99 0.00 0.00 3.97
542 544 8.718102 ACGAACTGTCATGTTAGCTAAATAAT 57.282 30.769 7.99 0.00 0.00 1.28
560 575 7.337718 CGGATATATTGTTTTCTGACGAACTG 58.662 38.462 0.00 0.00 0.00 3.16
585 600 1.336517 GGAGTTTTACTTTTGGGCGCC 60.337 52.381 21.18 21.18 0.00 6.53
587 602 2.882137 TCAGGAGTTTTACTTTTGGGCG 59.118 45.455 0.00 0.00 0.00 6.13
589 604 5.221422 TGCAATCAGGAGTTTTACTTTTGGG 60.221 40.000 0.00 0.00 0.00 4.12
687 705 1.507742 TCCTGGGCTGGTCTATATCCA 59.492 52.381 0.00 0.00 0.00 3.41
720 738 2.340337 GTGGATGGCTTTGATTTGCAC 58.660 47.619 0.00 0.00 0.00 4.57
744 762 3.244044 CCAGCCTCTGACTAATTAGCTCC 60.244 52.174 12.54 3.16 32.44 4.70
763 782 3.374402 ACTCGGCCTGTCGACCAG 61.374 66.667 14.12 10.30 41.15 4.00
764 783 3.680786 CACTCGGCCTGTCGACCA 61.681 66.667 14.12 0.01 35.18 4.02
765 784 4.436998 CCACTCGGCCTGTCGACC 62.437 72.222 14.12 0.00 35.18 4.79
850 894 1.787989 CGACGCGACGTAAAGCTTCTA 60.788 52.381 22.21 0.00 41.37 2.10
872 917 5.395214 CCCCTCTTTTCCCATTAAAATTCGG 60.395 44.000 0.00 0.00 0.00 4.30
1022 1072 4.325472 GCAAATCTTTCTTTGGCGATCTTG 59.675 41.667 0.00 0.00 36.76 3.02
1023 1073 4.488879 GCAAATCTTTCTTTGGCGATCTT 58.511 39.130 0.00 0.00 36.76 2.40
1024 1074 4.102035 GCAAATCTTTCTTTGGCGATCT 57.898 40.909 0.00 0.00 36.76 2.75
1066 1124 1.696832 GAAGACGATTCACCAGCGGC 61.697 60.000 0.00 0.00 0.00 6.53
1094 1152 1.208052 CGCCATGGAAGAGGAAGAAGA 59.792 52.381 18.40 0.00 0.00 2.87
1099 1160 1.078214 CTGCGCCATGGAAGAGGAA 60.078 57.895 18.40 0.00 0.00 3.36
1102 1163 1.310933 AAAGCTGCGCCATGGAAGAG 61.311 55.000 18.40 7.96 0.00 2.85
1206 1267 1.471676 GCATGGACGGACAGAAGGTAG 60.472 57.143 0.00 0.00 0.00 3.18
1215 1276 1.202580 AGCTCTTATGCATGGACGGAC 60.203 52.381 10.16 0.00 34.99 4.79
1270 1331 8.475639 AGTTCTCCTATATTGCGAAAACTTCTA 58.524 33.333 0.00 0.00 0.00 2.10
1272 1333 7.541122 AGTTCTCCTATATTGCGAAAACTTC 57.459 36.000 0.00 0.00 0.00 3.01
1273 1334 8.475639 TCTAGTTCTCCTATATTGCGAAAACTT 58.524 33.333 0.00 0.00 0.00 2.66
1274 1335 8.008513 TCTAGTTCTCCTATATTGCGAAAACT 57.991 34.615 0.00 0.00 0.00 2.66
1275 1336 8.136165 TCTCTAGTTCTCCTATATTGCGAAAAC 58.864 37.037 0.00 0.00 0.00 2.43
1279 1340 7.502895 AGTTTCTCTAGTTCTCCTATATTGCGA 59.497 37.037 0.00 0.00 0.00 5.10
1280 1341 7.653647 AGTTTCTCTAGTTCTCCTATATTGCG 58.346 38.462 0.00 0.00 0.00 4.85
1281 1342 9.471084 GAAGTTTCTCTAGTTCTCCTATATTGC 57.529 37.037 0.00 0.00 0.00 3.56
1282 1343 9.672086 CGAAGTTTCTCTAGTTCTCCTATATTG 57.328 37.037 0.00 0.00 0.00 1.90
1283 1344 8.354426 GCGAAGTTTCTCTAGTTCTCCTATATT 58.646 37.037 0.00 0.00 0.00 1.28
1284 1345 7.040271 GGCGAAGTTTCTCTAGTTCTCCTATAT 60.040 40.741 0.00 0.00 32.20 0.86
1285 1346 6.262720 GGCGAAGTTTCTCTAGTTCTCCTATA 59.737 42.308 0.00 0.00 32.20 1.31
1289 1350 3.513662 GGCGAAGTTTCTCTAGTTCTCC 58.486 50.000 0.00 0.00 0.00 3.71
1311 1372 4.866921 TGTGAGCATATACGTATGGACAC 58.133 43.478 18.37 19.19 38.49 3.67
1314 1375 5.875930 CGTATGTGAGCATATACGTATGGA 58.124 41.667 23.07 0.00 46.61 3.41
1384 1451 9.996554 TTCTGAACATATAAGTTGACTCTGAAA 57.003 29.630 0.00 0.00 0.00 2.69
1422 1489 5.542779 ACATTTTCAGGTCTATCGGCTATC 58.457 41.667 0.00 0.00 0.00 2.08
1427 1494 9.197694 CTTTATCTACATTTTCAGGTCTATCGG 57.802 37.037 0.00 0.00 0.00 4.18
1464 1531 9.303116 CCTACAGAACTATCAACTATCCTACAT 57.697 37.037 0.00 0.00 0.00 2.29
1465 1532 8.500238 TCCTACAGAACTATCAACTATCCTACA 58.500 37.037 0.00 0.00 0.00 2.74
1466 1533 8.921353 TCCTACAGAACTATCAACTATCCTAC 57.079 38.462 0.00 0.00 0.00 3.18
1467 1534 8.946248 TCTCCTACAGAACTATCAACTATCCTA 58.054 37.037 0.00 0.00 0.00 2.94
1468 1535 7.817440 TCTCCTACAGAACTATCAACTATCCT 58.183 38.462 0.00 0.00 0.00 3.24
1469 1536 7.722285 ACTCTCCTACAGAACTATCAACTATCC 59.278 40.741 0.00 0.00 0.00 2.59
1470 1537 8.685838 ACTCTCCTACAGAACTATCAACTATC 57.314 38.462 0.00 0.00 0.00 2.08
1471 1538 9.127277 GAACTCTCCTACAGAACTATCAACTAT 57.873 37.037 0.00 0.00 0.00 2.12
1472 1539 8.330247 AGAACTCTCCTACAGAACTATCAACTA 58.670 37.037 0.00 0.00 0.00 2.24
1473 1540 7.179269 AGAACTCTCCTACAGAACTATCAACT 58.821 38.462 0.00 0.00 0.00 3.16
1474 1541 7.399245 AGAACTCTCCTACAGAACTATCAAC 57.601 40.000 0.00 0.00 0.00 3.18
1476 1543 9.781633 GTATAGAACTCTCCTACAGAACTATCA 57.218 37.037 0.00 0.00 30.90 2.15
1477 1544 9.223099 GGTATAGAACTCTCCTACAGAACTATC 57.777 40.741 0.00 0.00 30.90 2.08
1478 1545 8.951541 AGGTATAGAACTCTCCTACAGAACTAT 58.048 37.037 0.00 0.00 32.07 2.12
1479 1546 8.212312 CAGGTATAGAACTCTCCTACAGAACTA 58.788 40.741 0.00 0.00 0.00 2.24
1480 1547 7.057894 CAGGTATAGAACTCTCCTACAGAACT 58.942 42.308 0.00 0.00 0.00 3.01
1481 1548 6.829811 ACAGGTATAGAACTCTCCTACAGAAC 59.170 42.308 0.00 0.00 0.00 3.01
1505 1592 6.639671 TTTTGCGGCATATACATGAAAAAC 57.360 33.333 2.28 0.00 33.67 2.43
1564 1659 2.803817 AACGGCGTCAGACAAGGGT 61.804 57.895 15.17 0.00 0.00 4.34
1580 1675 2.342910 CAGCATTGCAGAGGAACAAC 57.657 50.000 11.91 0.00 0.00 3.32
1645 1740 1.752501 CGTTCACCGCGATGATGTCC 61.753 60.000 2.71 0.00 0.00 4.02
1771 1866 2.568623 AGTTTTCTGTAGCTGGGGTG 57.431 50.000 0.00 0.00 0.00 4.61
1795 1890 4.861210 TCGAAGAACAGAGTTTCAGAGAC 58.139 43.478 0.00 0.00 0.00 3.36
1797 1892 6.589830 TTTTCGAAGAACAGAGTTTCAGAG 57.410 37.500 0.00 0.00 45.90 3.35
1875 1970 0.108615 GGCTAGATGACACACAGCGT 60.109 55.000 0.00 0.00 40.13 5.07
1913 2009 1.136305 TGCGAACTAGGTAGATGCCAC 59.864 52.381 0.00 0.00 0.00 5.01
1923 2019 1.272490 TCAACAGTCCTGCGAACTAGG 59.728 52.381 0.00 0.00 36.63 3.02
1975 2074 7.380065 CGCTAAGATAGTCAGACAAACTAATCC 59.620 40.741 2.66 0.00 33.19 3.01
2142 2241 4.106029 TGTACTGATAACGAGACTTGGC 57.894 45.455 0.00 0.00 0.00 4.52
2169 2268 4.626042 ACTATTGGCGACATTTGCAAAAA 58.374 34.783 17.19 4.25 42.32 1.94
2170 2269 4.250116 ACTATTGGCGACATTTGCAAAA 57.750 36.364 17.19 0.00 42.32 2.44
2171 2270 3.932545 ACTATTGGCGACATTTGCAAA 57.067 38.095 15.44 15.44 42.32 3.68
2172 2271 4.006989 AGTACTATTGGCGACATTTGCAA 58.993 39.130 0.00 0.00 42.32 4.08
2173 2272 3.605634 AGTACTATTGGCGACATTTGCA 58.394 40.909 0.00 0.00 42.32 4.08
2174 2273 4.569162 TGTAGTACTATTGGCGACATTTGC 59.431 41.667 5.75 0.00 42.32 3.68
2175 2274 6.312918 ACTTGTAGTACTATTGGCGACATTTG 59.687 38.462 5.75 0.00 42.32 2.32
2176 2275 6.403878 ACTTGTAGTACTATTGGCGACATTT 58.596 36.000 5.75 0.00 42.32 2.32
2177 2276 5.974108 ACTTGTAGTACTATTGGCGACATT 58.026 37.500 5.75 0.00 42.32 2.71
2178 2277 5.593679 ACTTGTAGTACTATTGGCGACAT 57.406 39.130 5.75 0.00 42.32 3.06
2179 2278 5.395682 AACTTGTAGTACTATTGGCGACA 57.604 39.130 5.75 0.00 39.83 4.35
2180 2279 6.808212 TGTAAACTTGTAGTACTATTGGCGAC 59.192 38.462 5.75 0.00 0.00 5.19
2181 2280 6.923012 TGTAAACTTGTAGTACTATTGGCGA 58.077 36.000 5.75 0.00 0.00 5.54
2182 2281 7.450627 GTTGTAAACTTGTAGTACTATTGGCG 58.549 38.462 5.75 0.00 45.32 5.69
2212 2311 7.397892 TTTTTGTGTGATCCTTTTGTCTACA 57.602 32.000 0.00 0.00 0.00 2.74
2290 2397 4.900635 AAAAAGACAGCGTGAAAGACAT 57.099 36.364 0.00 0.00 0.00 3.06
2323 2430 2.110213 TGCCGACCACACTTGTCC 59.890 61.111 0.00 0.00 0.00 4.02
2346 2473 0.657840 GATAACACATGGCGGCAGAC 59.342 55.000 19.29 0.00 0.00 3.51
2365 2492 2.277591 CCCCAGCACCACACCAATG 61.278 63.158 0.00 0.00 0.00 2.82
2369 2496 1.228862 AAATCCCCAGCACCACACC 60.229 57.895 0.00 0.00 0.00 4.16
2370 2497 0.539438 TCAAATCCCCAGCACCACAC 60.539 55.000 0.00 0.00 0.00 3.82
2380 2507 7.765819 CCAAAGATCAGTTAAATTCAAATCCCC 59.234 37.037 0.00 0.00 0.00 4.81
2422 2562 2.047844 GGCGTCAGCTTCTGCAGA 60.048 61.111 13.74 13.74 44.37 4.26
2668 2808 2.292267 GGATCTGCGTGGTGATTGATT 58.708 47.619 0.00 0.00 0.00 2.57
2669 2809 1.475751 GGGATCTGCGTGGTGATTGAT 60.476 52.381 0.00 0.00 0.00 2.57
2670 2810 0.107703 GGGATCTGCGTGGTGATTGA 60.108 55.000 0.00 0.00 0.00 2.57
2677 2817 0.816825 CAGGAATGGGATCTGCGTGG 60.817 60.000 0.00 0.00 0.00 4.94
2687 2827 2.025981 TCAGACAATGGACAGGAATGGG 60.026 50.000 0.00 0.00 0.00 4.00
2713 2853 6.102174 CCCATCCATCCATCCATCAATATAGA 59.898 42.308 0.00 0.00 0.00 1.98
2716 2856 4.078805 CCCCATCCATCCATCCATCAATAT 60.079 45.833 0.00 0.00 0.00 1.28
2721 2861 1.284198 CTCCCCATCCATCCATCCATC 59.716 57.143 0.00 0.00 0.00 3.51
2722 2862 1.379776 CTCCCCATCCATCCATCCAT 58.620 55.000 0.00 0.00 0.00 3.41
2723 2863 0.773305 CCTCCCCATCCATCCATCCA 60.773 60.000 0.00 0.00 0.00 3.41
2724 2864 0.773700 ACCTCCCCATCCATCCATCC 60.774 60.000 0.00 0.00 0.00 3.51
2776 2916 4.436998 CCACTCGCCTGTCCCGAC 62.437 72.222 0.00 0.00 0.00 4.79
2808 2948 1.864862 GTCCTTCTCGACGTCGACA 59.135 57.895 34.97 24.05 44.22 4.35
2886 3026 2.664081 GCACTGGTAGAGCTGGCCT 61.664 63.158 3.32 0.00 0.00 5.19
2925 3065 8.617809 TGTAAATTTCACCTGAAGTTACAGAAC 58.382 33.333 15.59 5.07 39.15 3.01
2991 3142 2.386249 GCCGTGAACGTCTCATCTATC 58.614 52.381 1.75 0.00 36.14 2.08
2992 3143 1.268589 CGCCGTGAACGTCTCATCTAT 60.269 52.381 1.75 0.00 36.14 1.98
3024 3175 2.658707 GAGCAGCACCGTCGTGTTC 61.659 63.158 0.00 0.00 42.39 3.18
3090 3241 1.821759 CACCGTGAAGTTGTGGCCA 60.822 57.895 0.00 0.00 0.00 5.36
3376 3527 1.077089 GAGTAGAAGTCGTTGGCCGC 61.077 60.000 0.00 0.00 36.19 6.53
3552 3703 1.875813 CAGGAGCGACATCTGCGTC 60.876 63.158 0.00 0.00 37.44 5.19
3678 3829 0.109412 CCTCCACCGTCGAGTTGTAC 60.109 60.000 0.00 0.00 0.00 2.90
3719 3870 3.379445 GGCTCTCCGACGGGAACA 61.379 66.667 15.25 0.00 43.27 3.18
3897 4048 2.827921 GACGGAGAAAGTACCTGGGTTA 59.172 50.000 0.00 0.00 0.00 2.85
3909 4060 3.118738 GCTGAAATAGAGGGACGGAGAAA 60.119 47.826 0.00 0.00 0.00 2.52
3912 4063 1.069358 GGCTGAAATAGAGGGACGGAG 59.931 57.143 0.00 0.00 0.00 4.63
3913 4064 1.120530 GGCTGAAATAGAGGGACGGA 58.879 55.000 0.00 0.00 0.00 4.69
3954 4124 6.721571 ACACCGAATCATTAACACTGTTAG 57.278 37.500 1.95 0.00 0.00 2.34
3972 4146 2.336088 CTGCAAGCCCAAACACCG 59.664 61.111 0.00 0.00 0.00 4.94
3987 4169 3.344703 TGGAAGAACCACATGCCTG 57.655 52.632 0.00 0.00 44.64 4.85
4121 4303 2.725815 GAAACTTGCGTGCGTGCC 60.726 61.111 0.00 0.00 0.00 5.01
4140 4322 0.040958 GATCATGGTGAAATCGCGCC 60.041 55.000 0.00 0.00 38.91 6.53
4152 4334 2.572191 ATTTGCACGCAAGATCATGG 57.428 45.000 4.43 0.00 43.62 3.66
4220 4402 2.977829 CACACGTATACAATCCGATCCG 59.022 50.000 3.32 0.00 0.00 4.18
4221 4403 2.729882 GCACACGTATACAATCCGATCC 59.270 50.000 3.32 0.00 0.00 3.36
4222 4404 3.377439 TGCACACGTATACAATCCGATC 58.623 45.455 3.32 0.00 0.00 3.69
4223 4405 3.381045 CTGCACACGTATACAATCCGAT 58.619 45.455 3.32 0.00 0.00 4.18
4224 4406 2.480587 CCTGCACACGTATACAATCCGA 60.481 50.000 3.32 0.00 0.00 4.55
4287 4471 2.837532 ACACCAAACCCAATTCATGC 57.162 45.000 0.00 0.00 0.00 4.06
4372 4556 7.523415 TCATGTGTATAGTATCTACACCTCCA 58.477 38.462 11.84 0.00 45.37 3.86
4373 4557 7.997773 TCATGTGTATAGTATCTACACCTCC 57.002 40.000 11.84 0.00 45.37 4.30
4382 4566 7.912056 ATGCAACCATCATGTGTATAGTATC 57.088 36.000 0.00 0.00 0.00 2.24
4412 5232 3.503363 GCATGCACTCCGACCAGC 61.503 66.667 14.21 0.00 0.00 4.85
4416 5236 1.717937 GTCATGCATGCACTCCGAC 59.282 57.895 25.37 21.58 0.00 4.79
4464 5284 3.365220 CGAACCTCTGAAGTTCAATCGTC 59.635 47.826 16.85 0.86 43.07 4.20
4506 5326 9.712305 ACAATATGCAATCCTGTAAGTATCTAC 57.288 33.333 0.00 0.00 0.00 2.59
4519 5341 6.488006 ACTCCAATCAGTACAATATGCAATCC 59.512 38.462 0.00 0.00 0.00 3.01
4601 5424 7.343833 ACATTTAAGAACGGAGGGAGTAGATAA 59.656 37.037 0.00 0.00 0.00 1.75
4606 5429 6.438425 ACTTACATTTAAGAACGGAGGGAGTA 59.562 38.462 5.64 0.00 37.49 2.59
4607 5430 5.247792 ACTTACATTTAAGAACGGAGGGAGT 59.752 40.000 5.64 0.00 37.49 3.85
4608 5431 5.731591 ACTTACATTTAAGAACGGAGGGAG 58.268 41.667 5.64 0.00 37.49 4.30
4609 5432 5.482878 AGACTTACATTTAAGAACGGAGGGA 59.517 40.000 5.64 0.00 37.49 4.20
4610 5433 5.731591 AGACTTACATTTAAGAACGGAGGG 58.268 41.667 5.64 0.00 37.49 4.30
4611 5434 7.668525 AAAGACTTACATTTAAGAACGGAGG 57.331 36.000 5.64 0.00 37.49 4.30
4638 5461 9.601217 GTATGTTGTAGTCCACTTGAAATATCT 57.399 33.333 0.00 0.00 0.00 1.98
4639 5462 8.540492 CGTATGTTGTAGTCCACTTGAAATATC 58.460 37.037 0.00 0.00 0.00 1.63
4640 5463 8.255206 TCGTATGTTGTAGTCCACTTGAAATAT 58.745 33.333 0.00 0.00 0.00 1.28
4641 5464 7.604549 TCGTATGTTGTAGTCCACTTGAAATA 58.395 34.615 0.00 0.00 0.00 1.40
4642 5465 6.460781 TCGTATGTTGTAGTCCACTTGAAAT 58.539 36.000 0.00 0.00 0.00 2.17
4643 5466 5.845103 TCGTATGTTGTAGTCCACTTGAAA 58.155 37.500 0.00 0.00 0.00 2.69
4644 5467 5.456548 TCGTATGTTGTAGTCCACTTGAA 57.543 39.130 0.00 0.00 0.00 2.69
4645 5468 5.456548 TTCGTATGTTGTAGTCCACTTGA 57.543 39.130 0.00 0.00 0.00 3.02
4646 5469 5.637810 ACATTCGTATGTTGTAGTCCACTTG 59.362 40.000 1.31 0.00 42.29 3.16
4647 5470 5.790593 ACATTCGTATGTTGTAGTCCACTT 58.209 37.500 1.31 0.00 42.29 3.16
4648 5471 5.401531 ACATTCGTATGTTGTAGTCCACT 57.598 39.130 1.31 0.00 42.29 4.00
4649 5472 7.161829 CATACATTCGTATGTTGTAGTCCAC 57.838 40.000 13.12 0.00 46.70 4.02
4689 5512 4.510038 AGCAAAATGAGTGAATCCACAC 57.490 40.909 0.00 0.00 45.54 3.82
4690 5513 4.320421 CGAAGCAAAATGAGTGAATCCACA 60.320 41.667 0.00 0.00 45.54 4.17
4691 5514 4.161333 CGAAGCAAAATGAGTGAATCCAC 58.839 43.478 0.00 0.00 43.50 4.02
4692 5515 3.820467 ACGAAGCAAAATGAGTGAATCCA 59.180 39.130 0.00 0.00 0.00 3.41
4693 5516 4.154918 AGACGAAGCAAAATGAGTGAATCC 59.845 41.667 0.00 0.00 0.00 3.01
4694 5517 5.084722 CAGACGAAGCAAAATGAGTGAATC 58.915 41.667 0.00 0.00 0.00 2.52
4695 5518 4.516698 ACAGACGAAGCAAAATGAGTGAAT 59.483 37.500 0.00 0.00 0.00 2.57
4696 5519 3.876914 ACAGACGAAGCAAAATGAGTGAA 59.123 39.130 0.00 0.00 0.00 3.18
4697 5520 3.466836 ACAGACGAAGCAAAATGAGTGA 58.533 40.909 0.00 0.00 0.00 3.41
4698 5521 3.885484 ACAGACGAAGCAAAATGAGTG 57.115 42.857 0.00 0.00 0.00 3.51
4699 5522 3.997021 CCTACAGACGAAGCAAAATGAGT 59.003 43.478 0.00 0.00 0.00 3.41
4700 5523 3.181516 GCCTACAGACGAAGCAAAATGAG 60.182 47.826 0.00 0.00 0.00 2.90
4701 5524 2.742053 GCCTACAGACGAAGCAAAATGA 59.258 45.455 0.00 0.00 0.00 2.57
4702 5525 2.483877 TGCCTACAGACGAAGCAAAATG 59.516 45.455 0.00 0.00 0.00 2.32
4703 5526 2.484264 GTGCCTACAGACGAAGCAAAAT 59.516 45.455 0.00 0.00 34.79 1.82
4704 5527 1.871039 GTGCCTACAGACGAAGCAAAA 59.129 47.619 0.00 0.00 34.79 2.44
4705 5528 1.070134 AGTGCCTACAGACGAAGCAAA 59.930 47.619 0.00 0.00 34.79 3.68
4706 5529 0.679505 AGTGCCTACAGACGAAGCAA 59.320 50.000 0.00 0.00 34.79 3.91
4707 5530 0.679505 AAGTGCCTACAGACGAAGCA 59.320 50.000 0.00 0.00 0.00 3.91
4708 5531 1.071605 CAAGTGCCTACAGACGAAGC 58.928 55.000 0.00 0.00 0.00 3.86
4709 5532 2.440539 ACAAGTGCCTACAGACGAAG 57.559 50.000 0.00 0.00 0.00 3.79
4710 5533 2.101750 TCAACAAGTGCCTACAGACGAA 59.898 45.455 0.00 0.00 0.00 3.85
4711 5534 1.684450 TCAACAAGTGCCTACAGACGA 59.316 47.619 0.00 0.00 0.00 4.20
4712 5535 2.148916 TCAACAAGTGCCTACAGACG 57.851 50.000 0.00 0.00 0.00 4.18
4713 5536 4.757149 AGATTTCAACAAGTGCCTACAGAC 59.243 41.667 0.00 0.00 0.00 3.51
4714 5537 4.756642 CAGATTTCAACAAGTGCCTACAGA 59.243 41.667 0.00 0.00 0.00 3.41
4715 5538 4.516698 ACAGATTTCAACAAGTGCCTACAG 59.483 41.667 0.00 0.00 0.00 2.74
4716 5539 4.460263 ACAGATTTCAACAAGTGCCTACA 58.540 39.130 0.00 0.00 0.00 2.74
4717 5540 6.554334 TTACAGATTTCAACAAGTGCCTAC 57.446 37.500 0.00 0.00 0.00 3.18
4718 5541 7.575414 TTTTACAGATTTCAACAAGTGCCTA 57.425 32.000 0.00 0.00 0.00 3.93
4719 5542 6.463995 TTTTACAGATTTCAACAAGTGCCT 57.536 33.333 0.00 0.00 0.00 4.75
4720 5543 6.200854 CCTTTTTACAGATTTCAACAAGTGCC 59.799 38.462 0.00 0.00 0.00 5.01
4721 5544 6.978080 TCCTTTTTACAGATTTCAACAAGTGC 59.022 34.615 0.00 0.00 0.00 4.40
4722 5545 9.533253 AATCCTTTTTACAGATTTCAACAAGTG 57.467 29.630 0.00 0.00 0.00 3.16
4743 5566 9.780186 CTCCCTTCGTTTCTAAATATAAATCCT 57.220 33.333 0.00 0.00 0.00 3.24
4744 5567 9.557061 ACTCCCTTCGTTTCTAAATATAAATCC 57.443 33.333 0.00 0.00 0.00 3.01
4747 5570 9.538508 GCTACTCCCTTCGTTTCTAAATATAAA 57.461 33.333 0.00 0.00 0.00 1.40
4748 5571 7.864379 CGCTACTCCCTTCGTTTCTAAATATAA 59.136 37.037 0.00 0.00 0.00 0.98
4749 5572 7.229306 TCGCTACTCCCTTCGTTTCTAAATATA 59.771 37.037 0.00 0.00 0.00 0.86
4750 5573 6.040166 TCGCTACTCCCTTCGTTTCTAAATAT 59.960 38.462 0.00 0.00 0.00 1.28
4751 5574 5.357878 TCGCTACTCCCTTCGTTTCTAAATA 59.642 40.000 0.00 0.00 0.00 1.40
4752 5575 4.159135 TCGCTACTCCCTTCGTTTCTAAAT 59.841 41.667 0.00 0.00 0.00 1.40
4753 5576 3.507233 TCGCTACTCCCTTCGTTTCTAAA 59.493 43.478 0.00 0.00 0.00 1.85
4754 5577 3.084039 TCGCTACTCCCTTCGTTTCTAA 58.916 45.455 0.00 0.00 0.00 2.10
4755 5578 2.681848 CTCGCTACTCCCTTCGTTTCTA 59.318 50.000 0.00 0.00 0.00 2.10
4756 5579 1.473278 CTCGCTACTCCCTTCGTTTCT 59.527 52.381 0.00 0.00 0.00 2.52
4757 5580 1.910688 CTCGCTACTCCCTTCGTTTC 58.089 55.000 0.00 0.00 0.00 2.78
4758 5581 0.108756 GCTCGCTACTCCCTTCGTTT 60.109 55.000 0.00 0.00 0.00 3.60
4759 5582 0.966370 AGCTCGCTACTCCCTTCGTT 60.966 55.000 0.00 0.00 0.00 3.85
4760 5583 1.378778 AGCTCGCTACTCCCTTCGT 60.379 57.895 0.00 0.00 0.00 3.85
4761 5584 1.064946 CAGCTCGCTACTCCCTTCG 59.935 63.158 0.00 0.00 0.00 3.79
4762 5585 1.038130 TCCAGCTCGCTACTCCCTTC 61.038 60.000 0.00 0.00 0.00 3.46
4763 5586 0.397816 ATCCAGCTCGCTACTCCCTT 60.398 55.000 0.00 0.00 0.00 3.95
4764 5587 1.112315 CATCCAGCTCGCTACTCCCT 61.112 60.000 0.00 0.00 0.00 4.20
4765 5588 1.109920 TCATCCAGCTCGCTACTCCC 61.110 60.000 0.00 0.00 0.00 4.30
4766 5589 0.313672 CTCATCCAGCTCGCTACTCC 59.686 60.000 0.00 0.00 0.00 3.85
4767 5590 1.313772 TCTCATCCAGCTCGCTACTC 58.686 55.000 0.00 0.00 0.00 2.59
4768 5591 1.612950 CATCTCATCCAGCTCGCTACT 59.387 52.381 0.00 0.00 0.00 2.57
4769 5592 1.934399 GCATCTCATCCAGCTCGCTAC 60.934 57.143 0.00 0.00 0.00 3.58
4847 5677 1.760613 TGTCCTTTGGTGACGAACTCT 59.239 47.619 0.00 0.00 35.46 3.24
4861 5691 4.117685 GTCACTAACACGACTTTGTCCTT 58.882 43.478 0.00 0.00 0.00 3.36
4875 5705 1.194772 GGCAGCAAAGTCGTCACTAAC 59.805 52.381 0.00 0.00 30.14 2.34
4950 5781 1.364721 CGTGGATGGTTACGCATGAA 58.635 50.000 0.00 0.00 33.25 2.57
4994 5826 1.202758 TCACAAGACGTCAAGGCCAAT 60.203 47.619 19.50 0.00 0.00 3.16
4999 5831 5.666969 TTTGTATTCACAAGACGTCAAGG 57.333 39.130 19.50 8.92 45.17 3.61
5078 5910 0.949397 ACGGGGCGAAAGTCTTTTTC 59.051 50.000 0.00 0.00 34.89 2.29
5079 5911 1.395635 AACGGGGCGAAAGTCTTTTT 58.604 45.000 0.00 0.00 34.89 1.94
5080 5912 1.395635 AAACGGGGCGAAAGTCTTTT 58.604 45.000 0.00 0.00 34.89 2.27
5081 5913 1.395635 AAAACGGGGCGAAAGTCTTT 58.604 45.000 0.00 0.00 34.89 2.52
5082 5914 2.259266 TAAAACGGGGCGAAAGTCTT 57.741 45.000 0.00 0.00 34.89 3.01
5083 5915 2.484742 ATAAAACGGGGCGAAAGTCT 57.515 45.000 0.00 0.00 34.89 3.24
5084 5916 7.656707 TTATATATAAAACGGGGCGAAAGTC 57.343 36.000 2.56 0.00 0.00 3.01
5085 5917 7.308169 GCTTTATATATAAAACGGGGCGAAAGT 60.308 37.037 16.69 0.00 32.39 2.66
5086 5918 7.019418 GCTTTATATATAAAACGGGGCGAAAG 58.981 38.462 16.69 5.83 32.39 2.62
5087 5919 6.485984 TGCTTTATATATAAAACGGGGCGAAA 59.514 34.615 16.69 1.77 32.39 3.46
5088 5920 5.996513 TGCTTTATATATAAAACGGGGCGAA 59.003 36.000 16.69 2.32 32.39 4.70
5089 5921 5.549347 TGCTTTATATATAAAACGGGGCGA 58.451 37.500 16.69 6.81 32.39 5.54
5090 5922 5.866335 TGCTTTATATATAAAACGGGGCG 57.134 39.130 16.69 6.67 32.39 6.13
5091 5923 6.314400 TCGATGCTTTATATATAAAACGGGGC 59.686 38.462 16.69 15.63 32.39 5.80
5092 5924 7.201582 GGTCGATGCTTTATATATAAAACGGGG 60.202 40.741 16.69 7.83 32.39 5.73
5093 5925 7.332430 TGGTCGATGCTTTATATATAAAACGGG 59.668 37.037 16.69 8.13 32.39 5.28
5094 5926 8.246908 TGGTCGATGCTTTATATATAAAACGG 57.753 34.615 16.69 8.42 32.39 4.44
5095 5927 9.525007 GTTGGTCGATGCTTTATATATAAAACG 57.475 33.333 16.69 17.23 32.39 3.60
5099 5931 9.549078 TGTTGTTGGTCGATGCTTTATATATAA 57.451 29.630 0.81 0.81 0.00 0.98
5100 5932 8.984764 GTGTTGTTGGTCGATGCTTTATATATA 58.015 33.333 0.00 0.00 0.00 0.86
5101 5933 7.041372 GGTGTTGTTGGTCGATGCTTTATATAT 60.041 37.037 0.00 0.00 0.00 0.86
5102 5934 6.259167 GGTGTTGTTGGTCGATGCTTTATATA 59.741 38.462 0.00 0.00 0.00 0.86
5103 5935 5.065988 GGTGTTGTTGGTCGATGCTTTATAT 59.934 40.000 0.00 0.00 0.00 0.86
5104 5936 4.393680 GGTGTTGTTGGTCGATGCTTTATA 59.606 41.667 0.00 0.00 0.00 0.98
5105 5937 3.190535 GGTGTTGTTGGTCGATGCTTTAT 59.809 43.478 0.00 0.00 0.00 1.40
5106 5938 2.550606 GGTGTTGTTGGTCGATGCTTTA 59.449 45.455 0.00 0.00 0.00 1.85
5107 5939 1.336755 GGTGTTGTTGGTCGATGCTTT 59.663 47.619 0.00 0.00 0.00 3.51
5108 5940 0.951558 GGTGTTGTTGGTCGATGCTT 59.048 50.000 0.00 0.00 0.00 3.91
5109 5941 0.889186 GGGTGTTGTTGGTCGATGCT 60.889 55.000 0.00 0.00 0.00 3.79
5110 5942 1.579429 GGGTGTTGTTGGTCGATGC 59.421 57.895 0.00 0.00 0.00 3.91
5111 5943 1.573829 CGGGGTGTTGTTGGTCGATG 61.574 60.000 0.00 0.00 0.00 3.84
5112 5944 1.302192 CGGGGTGTTGTTGGTCGAT 60.302 57.895 0.00 0.00 0.00 3.59
5113 5945 2.109387 CGGGGTGTTGTTGGTCGA 59.891 61.111 0.00 0.00 0.00 4.20
5114 5946 2.109387 TCGGGGTGTTGTTGGTCG 59.891 61.111 0.00 0.00 0.00 4.79
5115 5947 1.153127 TGTCGGGGTGTTGTTGGTC 60.153 57.895 0.00 0.00 0.00 4.02
5116 5948 1.452470 GTGTCGGGGTGTTGTTGGT 60.452 57.895 0.00 0.00 0.00 3.67
5117 5949 1.032657 TTGTGTCGGGGTGTTGTTGG 61.033 55.000 0.00 0.00 0.00 3.77
5118 5950 0.811915 TTTGTGTCGGGGTGTTGTTG 59.188 50.000 0.00 0.00 0.00 3.33
5119 5951 1.407258 CATTTGTGTCGGGGTGTTGTT 59.593 47.619 0.00 0.00 0.00 2.83
5120 5952 1.028905 CATTTGTGTCGGGGTGTTGT 58.971 50.000 0.00 0.00 0.00 3.32
5121 5953 0.318614 GCATTTGTGTCGGGGTGTTG 60.319 55.000 0.00 0.00 0.00 3.33
5122 5954 0.753479 TGCATTTGTGTCGGGGTGTT 60.753 50.000 0.00 0.00 0.00 3.32
5123 5955 1.152860 TGCATTTGTGTCGGGGTGT 60.153 52.632 0.00 0.00 0.00 4.16
5124 5956 1.285641 GTGCATTTGTGTCGGGGTG 59.714 57.895 0.00 0.00 0.00 4.61
5125 5957 2.258013 CGTGCATTTGTGTCGGGGT 61.258 57.895 0.00 0.00 0.00 4.95
5126 5958 2.560861 CGTGCATTTGTGTCGGGG 59.439 61.111 0.00 0.00 0.00 5.73
5127 5959 2.126888 GCGTGCATTTGTGTCGGG 60.127 61.111 0.00 0.00 0.00 5.14
5128 5960 2.126888 GGCGTGCATTTGTGTCGG 60.127 61.111 0.00 0.00 0.00 4.79
5129 5961 1.725625 GTGGCGTGCATTTGTGTCG 60.726 57.895 0.00 0.00 0.00 4.35
5130 5962 1.371635 GGTGGCGTGCATTTGTGTC 60.372 57.895 0.00 0.00 0.00 3.67
5131 5963 2.124060 TGGTGGCGTGCATTTGTGT 61.124 52.632 0.00 0.00 0.00 3.72
5132 5964 1.661197 GTGGTGGCGTGCATTTGTG 60.661 57.895 0.00 0.00 0.00 3.33
5133 5965 1.670949 TTGTGGTGGCGTGCATTTGT 61.671 50.000 0.00 0.00 0.00 2.83
5134 5966 1.067084 TTGTGGTGGCGTGCATTTG 59.933 52.632 0.00 0.00 0.00 2.32
5135 5967 1.067250 GTTGTGGTGGCGTGCATTT 59.933 52.632 0.00 0.00 0.00 2.32
5136 5968 2.124060 TGTTGTGGTGGCGTGCATT 61.124 52.632 0.00 0.00 0.00 3.56
5137 5969 2.518112 TGTTGTGGTGGCGTGCAT 60.518 55.556 0.00 0.00 0.00 3.96
5138 5970 3.513438 GTGTTGTGGTGGCGTGCA 61.513 61.111 0.00 0.00 0.00 4.57
5139 5971 3.513438 TGTGTTGTGGTGGCGTGC 61.513 61.111 0.00 0.00 0.00 5.34
5140 5972 2.407210 GTGTGTTGTGGTGGCGTG 59.593 61.111 0.00 0.00 0.00 5.34
5141 5973 3.199190 CGTGTGTTGTGGTGGCGT 61.199 61.111 0.00 0.00 0.00 5.68
5142 5974 4.605967 GCGTGTGTTGTGGTGGCG 62.606 66.667 0.00 0.00 0.00 5.69
5143 5975 3.513438 TGCGTGTGTTGTGGTGGC 61.513 61.111 0.00 0.00 0.00 5.01
5144 5976 2.402572 TGTGCGTGTGTTGTGGTGG 61.403 57.895 0.00 0.00 0.00 4.61
5145 5977 1.226267 GTGTGCGTGTGTTGTGGTG 60.226 57.895 0.00 0.00 0.00 4.17
5146 5978 1.672682 TGTGTGCGTGTGTTGTGGT 60.673 52.632 0.00 0.00 0.00 4.16
5147 5979 1.226267 GTGTGTGCGTGTGTTGTGG 60.226 57.895 0.00 0.00 0.00 4.17
5148 5980 1.226267 GGTGTGTGCGTGTGTTGTG 60.226 57.895 0.00 0.00 0.00 3.33
5149 5981 2.403378 GGGTGTGTGCGTGTGTTGT 61.403 57.895 0.00 0.00 0.00 3.32
5150 5982 1.927608 TTGGGTGTGTGCGTGTGTTG 61.928 55.000 0.00 0.00 0.00 3.33
5151 5983 1.653094 CTTGGGTGTGTGCGTGTGTT 61.653 55.000 0.00 0.00 0.00 3.32
5152 5984 2.045829 TTGGGTGTGTGCGTGTGT 60.046 55.556 0.00 0.00 0.00 3.72
5153 5985 2.715005 CTTGGGTGTGTGCGTGTG 59.285 61.111 0.00 0.00 0.00 3.82
5154 5986 2.515991 CCTTGGGTGTGTGCGTGT 60.516 61.111 0.00 0.00 0.00 4.49
5155 5987 3.964875 GCCTTGGGTGTGTGCGTG 61.965 66.667 0.00 0.00 0.00 5.34
5156 5988 4.497984 TGCCTTGGGTGTGTGCGT 62.498 61.111 0.00 0.00 0.00 5.24
5157 5989 3.198236 CTTGCCTTGGGTGTGTGCG 62.198 63.158 0.00 0.00 0.00 5.34
5158 5990 1.181098 ATCTTGCCTTGGGTGTGTGC 61.181 55.000 0.00 0.00 0.00 4.57
5159 5991 1.812571 GTATCTTGCCTTGGGTGTGTG 59.187 52.381 0.00 0.00 0.00 3.82
5160 5992 1.423541 TGTATCTTGCCTTGGGTGTGT 59.576 47.619 0.00 0.00 0.00 3.72
5161 5993 2.198827 TGTATCTTGCCTTGGGTGTG 57.801 50.000 0.00 0.00 0.00 3.82
5162 5994 4.526970 CTTATGTATCTTGCCTTGGGTGT 58.473 43.478 0.00 0.00 0.00 4.16
5163 5995 3.316308 GCTTATGTATCTTGCCTTGGGTG 59.684 47.826 0.00 0.00 0.00 4.61
5164 5996 3.555966 GCTTATGTATCTTGCCTTGGGT 58.444 45.455 0.00 0.00 0.00 4.51
5165 5997 2.549754 CGCTTATGTATCTTGCCTTGGG 59.450 50.000 0.00 0.00 0.00 4.12
5166 5998 2.031682 GCGCTTATGTATCTTGCCTTGG 60.032 50.000 0.00 0.00 0.00 3.61
5167 5999 2.874701 AGCGCTTATGTATCTTGCCTTG 59.125 45.455 2.64 0.00 0.00 3.61
5168 6000 2.874701 CAGCGCTTATGTATCTTGCCTT 59.125 45.455 7.50 0.00 0.00 4.35
5169 6001 2.103094 TCAGCGCTTATGTATCTTGCCT 59.897 45.455 7.50 0.00 0.00 4.75
5170 6002 2.478134 CTCAGCGCTTATGTATCTTGCC 59.522 50.000 7.50 0.00 0.00 4.52
5171 6003 3.126831 ACTCAGCGCTTATGTATCTTGC 58.873 45.455 7.50 0.00 0.00 4.01
5172 6004 5.281727 TGTACTCAGCGCTTATGTATCTTG 58.718 41.667 7.50 0.00 0.00 3.02
5173 6005 5.515797 TGTACTCAGCGCTTATGTATCTT 57.484 39.130 7.50 0.00 0.00 2.40
5174 6006 5.114785 CTGTACTCAGCGCTTATGTATCT 57.885 43.478 7.50 0.00 34.79 1.98
5187 6019 1.512926 GGTGGTGTTGCTGTACTCAG 58.487 55.000 0.00 0.00 43.87 3.35
5188 6020 0.107831 GGGTGGTGTTGCTGTACTCA 59.892 55.000 0.00 0.00 0.00 3.41
5189 6021 0.605589 GGGGTGGTGTTGCTGTACTC 60.606 60.000 0.00 0.00 0.00 2.59
5190 6022 1.349542 TGGGGTGGTGTTGCTGTACT 61.350 55.000 0.00 0.00 0.00 2.73
5191 6023 0.466555 TTGGGGTGGTGTTGCTGTAC 60.467 55.000 0.00 0.00 0.00 2.90
5192 6024 0.259065 TTTGGGGTGGTGTTGCTGTA 59.741 50.000 0.00 0.00 0.00 2.74
5193 6025 1.000993 TTTGGGGTGGTGTTGCTGT 59.999 52.632 0.00 0.00 0.00 4.40
5194 6026 1.042559 AGTTTGGGGTGGTGTTGCTG 61.043 55.000 0.00 0.00 0.00 4.41
5195 6027 0.553819 TAGTTTGGGGTGGTGTTGCT 59.446 50.000 0.00 0.00 0.00 3.91
5196 6028 0.671796 GTAGTTTGGGGTGGTGTTGC 59.328 55.000 0.00 0.00 0.00 4.17
5197 6029 2.060050 TGTAGTTTGGGGTGGTGTTG 57.940 50.000 0.00 0.00 0.00 3.33
5198 6030 2.242708 TCTTGTAGTTTGGGGTGGTGTT 59.757 45.455 0.00 0.00 0.00 3.32
5199 6031 1.847737 TCTTGTAGTTTGGGGTGGTGT 59.152 47.619 0.00 0.00 0.00 4.16
5200 6032 2.504367 CTCTTGTAGTTTGGGGTGGTG 58.496 52.381 0.00 0.00 0.00 4.17
5201 6033 1.202891 GCTCTTGTAGTTTGGGGTGGT 60.203 52.381 0.00 0.00 0.00 4.16
5202 6034 1.202879 TGCTCTTGTAGTTTGGGGTGG 60.203 52.381 0.00 0.00 0.00 4.61
5203 6035 2.154462 CTGCTCTTGTAGTTTGGGGTG 58.846 52.381 0.00 0.00 0.00 4.61
5204 6036 1.774856 ACTGCTCTTGTAGTTTGGGGT 59.225 47.619 0.00 0.00 35.63 4.95
5205 6037 2.427506 GACTGCTCTTGTAGTTTGGGG 58.572 52.381 0.00 0.00 39.21 4.96
5206 6038 2.069273 CGACTGCTCTTGTAGTTTGGG 58.931 52.381 0.00 0.00 39.21 4.12
5207 6039 2.069273 CCGACTGCTCTTGTAGTTTGG 58.931 52.381 0.00 0.00 39.21 3.28
5208 6040 2.069273 CCCGACTGCTCTTGTAGTTTG 58.931 52.381 0.00 0.00 39.21 2.93
5209 6041 1.692519 ACCCGACTGCTCTTGTAGTTT 59.307 47.619 0.00 0.00 39.21 2.66
5210 6042 1.272769 GACCCGACTGCTCTTGTAGTT 59.727 52.381 0.00 0.00 39.21 2.24
5211 6043 0.889306 GACCCGACTGCTCTTGTAGT 59.111 55.000 0.00 0.00 41.76 2.73
5212 6044 0.173708 GGACCCGACTGCTCTTGTAG 59.826 60.000 0.00 0.00 0.00 2.74
5213 6045 0.251653 AGGACCCGACTGCTCTTGTA 60.252 55.000 0.00 0.00 0.00 2.41
5214 6046 1.534235 AGGACCCGACTGCTCTTGT 60.534 57.895 0.00 0.00 0.00 3.16
5215 6047 1.216710 GAGGACCCGACTGCTCTTG 59.783 63.158 0.00 0.00 0.00 3.02
5216 6048 2.344203 CGAGGACCCGACTGCTCTT 61.344 63.158 0.00 0.00 0.00 2.85
5217 6049 2.752238 CGAGGACCCGACTGCTCT 60.752 66.667 0.00 0.00 0.00 4.09
5218 6050 2.750637 TCGAGGACCCGACTGCTC 60.751 66.667 1.45 0.00 33.14 4.26
5228 6060 1.728426 CGTGTTCACGGTCGAGGAC 60.728 63.158 16.17 0.00 0.00 3.85
5229 6061 1.893335 TCGTGTTCACGGTCGAGGA 60.893 57.895 22.02 1.65 0.00 3.71
5230 6062 1.728426 GTCGTGTTCACGGTCGAGG 60.728 63.158 22.02 0.00 33.09 4.63
5231 6063 1.009335 TGTCGTGTTCACGGTCGAG 60.009 57.895 22.02 0.00 33.09 4.04
5232 6064 1.298563 GTGTCGTGTTCACGGTCGA 60.299 57.895 22.02 3.33 0.00 4.20
5233 6065 2.297912 GGTGTCGTGTTCACGGTCG 61.298 63.158 22.02 0.46 36.76 4.79
5234 6066 2.297912 CGGTGTCGTGTTCACGGTC 61.298 63.158 22.02 16.19 36.76 4.79
5235 6067 2.278989 CGGTGTCGTGTTCACGGT 60.279 61.111 22.02 0.00 36.76 4.83
5236 6068 3.698463 GCGGTGTCGTGTTCACGG 61.698 66.667 22.02 9.22 38.53 4.94
5237 6069 4.042060 CGCGGTGTCGTGTTCACG 62.042 66.667 17.57 17.57 41.47 4.35
5238 6070 1.754436 TTTCGCGGTGTCGTGTTCAC 61.754 55.000 6.13 0.00 45.94 3.18
5239 6071 1.082679 TTTTCGCGGTGTCGTGTTCA 61.083 50.000 6.13 0.00 45.94 3.18
5240 6072 0.382636 CTTTTCGCGGTGTCGTGTTC 60.383 55.000 6.13 0.00 45.94 3.18
5241 6073 0.806884 TCTTTTCGCGGTGTCGTGTT 60.807 50.000 6.13 0.00 45.94 3.32
5242 6074 0.599204 ATCTTTTCGCGGTGTCGTGT 60.599 50.000 6.13 0.00 45.94 4.49
5244 6076 0.319211 TCATCTTTTCGCGGTGTCGT 60.319 50.000 6.13 0.00 38.89 4.34
5245 6077 0.787787 TTCATCTTTTCGCGGTGTCG 59.212 50.000 6.13 0.00 39.81 4.35
5246 6078 1.464189 GCTTCATCTTTTCGCGGTGTC 60.464 52.381 6.13 0.00 0.00 3.67
5247 6079 0.517316 GCTTCATCTTTTCGCGGTGT 59.483 50.000 6.13 0.00 0.00 4.16
5248 6080 0.798776 AGCTTCATCTTTTCGCGGTG 59.201 50.000 6.13 0.00 0.00 4.94
5249 6081 0.798776 CAGCTTCATCTTTTCGCGGT 59.201 50.000 6.13 0.00 0.00 5.68
5250 6082 0.522076 GCAGCTTCATCTTTTCGCGG 60.522 55.000 6.13 0.00 0.00 6.46
5251 6083 0.166597 TGCAGCTTCATCTTTTCGCG 59.833 50.000 0.00 0.00 0.00 5.87
5252 6084 2.556534 ATGCAGCTTCATCTTTTCGC 57.443 45.000 0.00 0.00 0.00 4.70
5253 6085 5.203370 GTCATATGCAGCTTCATCTTTTCG 58.797 41.667 0.88 0.00 0.00 3.46
5254 6086 5.007039 TCGTCATATGCAGCTTCATCTTTTC 59.993 40.000 0.88 0.00 0.00 2.29
5255 6087 4.877823 TCGTCATATGCAGCTTCATCTTTT 59.122 37.500 0.88 0.00 0.00 2.27
5256 6088 4.445453 TCGTCATATGCAGCTTCATCTTT 58.555 39.130 0.88 0.00 0.00 2.52
5257 6089 4.063998 TCGTCATATGCAGCTTCATCTT 57.936 40.909 0.88 0.00 0.00 2.40
5258 6090 3.740631 TCGTCATATGCAGCTTCATCT 57.259 42.857 0.88 0.00 0.00 2.90
5259 6091 3.059325 GGTTCGTCATATGCAGCTTCATC 60.059 47.826 0.88 0.00 0.00 2.92
5260 6092 2.874701 GGTTCGTCATATGCAGCTTCAT 59.125 45.455 3.83 3.83 0.00 2.57
5261 6093 2.279741 GGTTCGTCATATGCAGCTTCA 58.720 47.619 0.00 0.00 0.00 3.02
5262 6094 1.258982 CGGTTCGTCATATGCAGCTTC 59.741 52.381 0.00 0.00 0.00 3.86
5263 6095 1.290203 CGGTTCGTCATATGCAGCTT 58.710 50.000 0.00 0.00 0.00 3.74
5264 6096 0.175760 ACGGTTCGTCATATGCAGCT 59.824 50.000 0.00 0.00 33.69 4.24
5265 6097 0.301687 CACGGTTCGTCATATGCAGC 59.698 55.000 0.00 0.00 38.32 5.25
5266 6098 0.930310 CCACGGTTCGTCATATGCAG 59.070 55.000 0.00 0.00 38.32 4.41
5267 6099 0.461163 CCCACGGTTCGTCATATGCA 60.461 55.000 0.00 0.00 38.32 3.96
5268 6100 1.772063 GCCCACGGTTCGTCATATGC 61.772 60.000 0.00 0.00 38.32 3.14
5269 6101 0.179084 AGCCCACGGTTCGTCATATG 60.179 55.000 0.00 0.00 38.32 1.78
5270 6102 0.539986 AAGCCCACGGTTCGTCATAT 59.460 50.000 0.00 0.00 38.32 1.78
5271 6103 0.108520 GAAGCCCACGGTTCGTCATA 60.109 55.000 0.00 0.00 38.32 2.15
5272 6104 1.375523 GAAGCCCACGGTTCGTCAT 60.376 57.895 0.00 0.00 38.32 3.06
5273 6105 2.029964 GAAGCCCACGGTTCGTCA 59.970 61.111 0.00 0.00 38.32 4.35
5277 6109 2.626780 GCCTTGAAGCCCACGGTTC 61.627 63.158 2.05 0.00 45.00 3.62
5278 6110 2.597510 GCCTTGAAGCCCACGGTT 60.598 61.111 2.05 0.00 36.61 4.44
5282 6114 3.365265 CACCGCCTTGAAGCCCAC 61.365 66.667 0.00 0.00 0.00 4.61
5301 6133 2.479730 CGGTGTCGTATCCTTCCTGAAG 60.480 54.545 0.00 0.00 38.14 3.02
5302 6134 1.475280 CGGTGTCGTATCCTTCCTGAA 59.525 52.381 0.00 0.00 0.00 3.02
5303 6135 1.100510 CGGTGTCGTATCCTTCCTGA 58.899 55.000 0.00 0.00 0.00 3.86
5304 6136 0.102481 CCGGTGTCGTATCCTTCCTG 59.898 60.000 0.00 0.00 33.95 3.86
5305 6137 0.033796 TCCGGTGTCGTATCCTTCCT 60.034 55.000 0.00 0.00 33.95 3.36
5306 6138 0.384669 CTCCGGTGTCGTATCCTTCC 59.615 60.000 0.00 0.00 33.95 3.46
5307 6139 0.248949 GCTCCGGTGTCGTATCCTTC 60.249 60.000 0.00 0.00 33.95 3.46
5308 6140 1.814527 GCTCCGGTGTCGTATCCTT 59.185 57.895 0.00 0.00 33.95 3.36
5309 6141 2.478890 CGCTCCGGTGTCGTATCCT 61.479 63.158 0.00 0.00 33.95 3.24
5310 6142 2.025727 CGCTCCGGTGTCGTATCC 59.974 66.667 0.00 0.00 33.95 2.59
5311 6143 2.654404 GCGCTCCGGTGTCGTATC 60.654 66.667 17.24 2.92 33.95 2.24
5312 6144 4.203076 GGCGCTCCGGTGTCGTAT 62.203 66.667 7.64 0.00 33.95 3.06
5332 6164 4.135153 CTCTCAGGTCGGGCCGTG 62.135 72.222 27.32 17.39 43.70 4.94
5333 6165 4.680537 ACTCTCAGGTCGGGCCGT 62.681 66.667 27.32 3.11 43.70 5.68
5334 6166 3.827898 GACTCTCAGGTCGGGCCG 61.828 72.222 22.51 22.51 43.70 6.13
5335 6167 2.680352 TGACTCTCAGGTCGGGCC 60.680 66.667 0.00 0.00 38.91 5.80
5336 6168 1.662438 CTCTGACTCTCAGGTCGGGC 61.662 65.000 0.00 0.00 44.39 6.13
5337 6169 0.322997 ACTCTGACTCTCAGGTCGGG 60.323 60.000 0.00 0.00 44.39 5.14
5338 6170 1.540267 AACTCTGACTCTCAGGTCGG 58.460 55.000 0.00 0.00 44.39 4.79
5339 6171 2.094957 GGAAACTCTGACTCTCAGGTCG 60.095 54.545 0.00 0.00 44.39 4.79
5340 6172 2.232696 GGGAAACTCTGACTCTCAGGTC 59.767 54.545 0.00 0.00 44.39 3.85
5341 6173 2.252714 GGGAAACTCTGACTCTCAGGT 58.747 52.381 0.00 0.00 44.39 4.00
5342 6174 1.552792 GGGGAAACTCTGACTCTCAGG 59.447 57.143 0.00 0.00 44.39 3.86
5343 6175 2.534990 AGGGGAAACTCTGACTCTCAG 58.465 52.381 0.00 0.00 42.28 3.35
5344 6176 2.704190 AGGGGAAACTCTGACTCTCA 57.296 50.000 0.00 0.00 42.28 3.27
5345 6177 3.951680 CTCTAGGGGAAACTCTGACTCTC 59.048 52.174 0.00 0.00 44.95 3.20
5346 6178 3.880117 GCTCTAGGGGAAACTCTGACTCT 60.880 52.174 0.00 0.00 44.95 3.24
5347 6179 2.429250 GCTCTAGGGGAAACTCTGACTC 59.571 54.545 0.00 0.00 44.95 3.36
5348 6180 2.462723 GCTCTAGGGGAAACTCTGACT 58.537 52.381 0.00 0.00 44.95 3.41
5349 6181 2.971660 GCTCTAGGGGAAACTCTGAC 57.028 55.000 0.00 0.00 44.95 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.