>input_sequence_21020
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---------GAGCGATACAAGTTGCCTGGCCCAAGATCGCCAAAGAAAGATTTGCCTTTCCCTCTCTCTGA--------C
ACCGCCGCTGGTGAATCGTCTTCAACCTCGGT---CTTCTTCCTCTTCCATGGCGCAGCTTTTGTGGCTGGCGCTCGGGG
TTCTTCTTCTGGCCAGCTCCGTGGCCGACGCGGCGACTGCCAACTACACCTTCACAGTACTTCTCTCTACCTTCTGTCCG
TCCATGCATAAGAGCTTTTATTCATTCAGTTCATCTCAAGTTCATAGATATAGAAGTTTTCGCAATATAGGAGAACTAGA
GAAACTTCGCCGTGTCCATACGTATATGCTCACATACGCCGGCTAGCGGCAACTTACATG------CTTGACTTACAGTG
GCTATTAAGATTTCAGAGTCAACTTATATGTTCAGAAAACAGAGAATGGATAGCCGATAGACCTGAAAATGTAGATAAAG
TTGATAGTTTATGTAGGATAGTTGATAGTTCTGTAGGAG--------------------AGTTCTATACCTGTTTTTCAT
GTATATGCCGCAAAATCTTCTG--------CTTCGCAATCGTGCATACAGTCCTACAAACCCTTGTCTGACGCCGTTGTT
CCTCTGCAATGCTGCCACCAGGTACAGAGCATGAAAATCAACCAGCTGTGCAACAGCACGGACATCATCGCGGTGAACGG
CCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGACGAGGTCGTCGTCGACGTGATCAACGCGTCGCCGTACAACT
TAACCATCCACTGGTAAAATCCTTACACCCCAGCTACAGAAAACTTTCAGTCTCTGAAACTCTGTTCTTCGAAAAACATA
GAGCCAACATAGAGCCGTTTGCAACCGTTCCAACGGCGGCGTGGGGCACACGCTGTGTGTCATCTAGCCTCTTGTTTTT-
GAATCAAGGTGGCATCTACCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGGCAGTTTAGTTTCTC---GGATTAG
TTTGTCTGACTATCTTAGCGCCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAAGGGAAGGTTCTGAAAATGACGCCC
TACCTTCCGAGGCACCGCCGTTCACTGTAGGCGACCTCATCTGAACACCCTCCAAGTGTGCTCACCGCAGTGTTCAGACG
GCCAAGTCTCGTTATCAGTACAAGTTTTTTTTGCAAATGTCGCCAATAGTACTACAAGTTTACAACAAAATGTAGACAAA
AGGATCACACAAAAAACAGCTAAACTTACCGGCCACTGTACTAGACAAACATTCA--------AACATATTTGTTTATGT
CTTTCACGCTGTCTTTTTTCCTCTGGCAAGGACAAGT--------------------GTGGTCGGCACTTGAGTCTGCCG
CCATGTGTTATCATTGGTGTGGTGCTGGGGATTTGAAT-------------TTAACTGATCTTTGGCGGCAGGCACGGCA
TTCTGCAGAAGCTGACGCCGTGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCGATCCAGCCCAACGGCACCTACACG
TACCGGTTCAACGTGACGGGGCACGAGGGCACGCTGTGGTGGCACGCGCACTCCTCCTTCCTCCGCGCCACCGTGTACGG
GCCCCTCATCATCCGCCCCCGCAACGGCACCGCCTACCCCTTCCCGGCGCCGGACCAAGAGGTCCCCGTCGTACTTGGTA
TAATCATAATCAATCACCACGCAGATCCCATTCCTGTCCATTGTCTGATAGTTCTATATTGATGGATGGATGGATGGGGA
GGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGGTCGGGACAGGCGAGTGGTGGAGCCAGAATGTTGTCGACGTCGAG
AAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCATCAACGGCCTCACAGGCCAGCTCTACCA
GTGCGCAAGTATGTATTACCGTCAG----------TTCTGTAACTTCAGGTGAAATTTACAG-CTGATGGTGATGTGTGA
CATGATTCATTTGGTTCGTACGATAGATGAGACGTTCACGGCGGTGGTGCAGCCGAACACGACGGTGCTGCTCCGGGTGA
TCAACGCGGCGCTCAACACGCACCTCTTCTTCAAGGTGGCTGGCCACAACTTCACGGTGGTGGCCGTGGACGCGTGCTAC
ACCGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGCGCTCGTCTACACGGCCGCCGCGCC
GGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCACGGACGCCTCGGACAGCGGCTCCC
TCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCCACGCCCGCCATGCCGGCCATGCCCAACAACTCGGAC
TCGACGGCGGCCAACGACTTCTACTCCGGGCTGCGGGGCGTTCCCGCGGCCGTGCCGTCGCCGGTGGACGTGAACATGAC
CATCCAGCTGGGGCTGGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCGTGAACGCGTTCGCGGCGGCCATGA
ACGGCGTGTCGTTCCGGCTGCCGACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGCAACGCGTCCGGGGTGTACACGGCC
GACTTCCCCGACGGCGTGCCGCCCAACGGCACGGCCATGGTGGAGGGCACCAAGGTGAGGAGCCTGCCGTACAACTCGAC
GGTGGAGGTCGTGCTGCAGAACCCGATGGTGTTCCCGTCGGAGAGCCACCCGATCCACCTCCACGGCTTCAACTTCTTCG
TGCTGGCGCAGGGGCTGGGCACCTTCGCCCCCGGCAACGCCAGCGCCTACAACCTGGTCGACCCCGTGGCCCGCAACACC
ATCGCCGTGCCCGCCGGGGGCTGGGCCGTCATCCGCTTCGTCGCCAATAACCCAGGTACTTTCTCCGTCCCT--------
-----------CTATTTCAGCCCAAACTATATGGGCCTTGATTCTAACAG----TGTTAATGATTCGGTGTTTGGGCTT-
-------GCAGGCATGTGGTTCTTCCACTGCCACCTGGACGCGCACGTCCCGATGGGGCTCGGGATGGTGTTCGCGGTGG
AGAACGGGACGACGGCCGACTCCATGCTGCCGCCGCCGCCGGCGGATCTGCCCGTGTGCTAGGGCACGCACGCAAGTTTC
CGGCGCGATTTCACCATGATCTTGCGTGCAAATTTACAGAATTATTTGTTCTTTGTGTGTGTGAAAAAACGCGAGGGGCG
ACGGATCGGATTGTATACGTGTGCAGGGCCGTTGGTTGATTTGCCGCGCG--TGTCTACGGTGAACGTGTGCATGAATTG
GGTTTGGTGTAACAACGTTCTCTTTCTTTGGTGTAAATACCAATGATTATTCAATTTCAGAGGTTCTTTTCC--------
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>chr3A_1_TraesCS3A01G365300
CCGCCACATGATGGCTTTGCCCTCCAAACCCATCTTCAGGTCCCTTTCCCCTCCGGTGTCATCTTATGCTGGATGCGCCG
CTTGCTTATCTACACGGTTGGACGACCGTTGTTCGGTTATGCGTGCGTGCGTCCAATTAGGGTTGGGCGTGTTCCTGCAT
GCAGCCCCACAGGGGATTTTGCTGGTTCAGAAAGGCATAACTTGTGGGCATAATCCTCCATTTTTGTCCGCTGCCGACGT
GTTAAGCGCATCCGGCGGAATGTGTGTCAATGCAAGTGCTCTCTGGATTCGGCCATTTGGGGACCAAACCGCCTCCTGGC
ATAGATAATTGAGCGTCGGATCAAATTATTGTTTAGATGATGAT-ACTTCAAACCCCTCAGTGGCTAAGCTGCTAGTTCA
GGTGCGGATGGGATACTCGGGCTTGTACGCTACTACACCTCAGCTTTGAGAGATACTTTTATTGACACAAATGAGGGATC
AGCAGGGACACTTTGAGACATGTGATTAGTCCATTTTGGAATGCAGAAATTTTTTCCCATCCAATTATTTAGC-------
------TAACATGACAGTTCGTCAGAAAACAATATATCCGGCGCCC--AAAAGTAAAACTCCTGATTGCATCCGATGAAA
ACGGCATT-TTTCGCCGACGCGTCGCCATATGCCAGCCGGGAAAGATGATTCGACGGTGCTCCTTGGATATAGACCAGCC
CAGGATTGATTTCGGCAGTGCAAATCAAAGCCATCCACGAAG-GAGCTAATTAGTCAGAGGCTGGTCGACAGGCCGAGTG
GCATGAAAACCTCCCCATCAGACCCACCGGG-------------------------ACACCTAGATTACGAGCGTGTGAG
CGCGCGACATCGCTAGAAGCTTTACGTCGCG-TCGCCCGAATTTTAATGGGAAAAGAGGGGG-GCAAATATGCCAGTCGG
ACTGAGCTAC--AAGTGATTCCTCCCGGAGGAGGAGC-CCAAAAGCATCCCTATAGTATATATACCTATCGTGTTTCTTG
GAAGACTT-GAGCGATACAAGTTGCCTGGCCCAAGATCGCCAAAGAAAGATTTGCCTTTCCCTCTCTCTGA--------C
ACCGCCGCTGGTGAATCGTCTTCAACCTCGGT---CTTCTTCCTCTTCCATGGCGCAGCTTTTGTGGCTGGCGCTCGGGG
TTCTTCTTCTGGCCAGCTCCGTGGCCGACGCGGCGACTGCCAACTACACCTTCACAGTACTTCTCTCTACCTTCTGTCCG
TCCATGCATAAGAGCTTTTATTCATTCAGTTCATCTCAAGTTCATAGATATAGAAGTTTTCGCAATATAGGAGAACTAGA
GAAACTTCGCCGTGTCCATACGTATATGCTCACATACGCCGGCTAGCGGCAACTTACATG------CTTGACTTACAGTG
GCTATTAAGATTTCAGAGTCAACTTATATGTTCAGAAAACAGAGAATGGATAGCCGATAGACCTGAAAATGTAGATAAAG
TTGATAGTTTATGTAGGATAGTTGATAGTTCTGTAGGAG--------------------AGTTCTATACCTGTTTTTCAT
GTATATGCCGCAAAATCTTCTG--------CTTCGCAATCGTGCATACAGTCCTACAAACCCTTGTCTGACGCCGTTGTT
CCTCTGCAATGCTGCCACCAGGTACAGAGCATGAAAATCAACCAGCTGTGCAACAGCACGGACATCATCGCGGTGAACGG
CCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGACGAGGTCGTCGTCGACGTGATCAACGCGTCGCCGTACAACT
TAACCATCCACTGGTAAAATCCTTACACCCCAGCTACAGAAAACTTTCAGTCTCTGAAACTCTGTTCTTCGAAAAACATA
GAGCCAACATAGAGCCGTTTGCAACCGTTCCAACGGCGGCGTGGGGCACACGCTGTGTGTCATCTAGCCTCTTGTTTTT-
GAATCAAGGTGGCATCTACCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGGCAGTTTAGTTTCTC---GGATTAG
TTTGTCTGACTATCTTAGCGCCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAAGGGAAGGTTCTGAAAATGACGCCC
TACCTTCCGAGGCACCGCCGTTCACTGTAGGCGACCTCATCTGAACACCCTCCAAGTGTGCTCACCGCAGTGTTCAGACG
GCCAAGTCTCGTTATCAGTACAAGTTTTTTTTGCAAATGTCGCCAATAGTACTACAAGTTTACAACAAAATGTAGACAAA
AGGATCACACAAAAAACAGCTAAACTTACCGGCCACTGTACTAGACAAACATTCA--------AACATATTTGTTTATGT
CTTTCACGCTGTCTTTTTTCCTCTGGCAAGGACAAGT--------------------GTGGTCGGCACTTGAGTCTGCCG
CCATGTGTTATCATTGGTGTGGTGCTGGGGATTTGAAT-------------TTAACTGATCTTTGGCGGCAGGCACGGCA
TTCTGCAGAAGCTGACGCCGTGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCGATCCAGCCCAACGGCACCTACACG
TACCGGTTCAACGTGACGGGGCACGAGGGCACGCTGTGGTGGCACGCGCACTCCTCCTTCCTCCGCGCCACCGTGTACGG
GCCCCTCATCATCCGCCCCCGCAACGGCACCGCCTACCCCTTCCCGGCGCCGGACCAAGAGGTCCCCGTCGTACTTGGTA
TAATCATAATCAATCACCACGCAGATCCCATTCCTGTCCATTGTCTGATAGTTCTATATTGATGGATGGATGGATGGGGA
GGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGGTCGGGACAGGCGAGTGGTGGAGCCAGAATGTTGTCGACGTCGAG
AAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCATCAACGGCCTCACAGGCCAGCTCTACCA
GTGCGCAAGTATGTATTACCGTCAG----------TTCTGTAACTTCAGGTGAAATTTACAG-CTGATGGTGATGTGTGA
CATGATTCATTTGGTTCGTACGATAGATGAGACGTTCACGGCGGTGGTGCAGCCGAACACGACGGTGCTGCTCCGGGTGA
TCAACGCGGCGCTCAACACGCACCTCTTCTTCAAGGTGGCTGGCCACAACTTCACGGTGGTGGCCGTGGACGCGTGCTAC
ACCGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGCGCTCGTCTACACGGCCGCCGCGCC
GGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCACGGACGCCTCGGACAGCGGCTCCC
TCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCCACGCCCGCCATGCCGGCCATGCCCAACAACTCGGAC
TCGACGGCGGCCAACGACTTCTACTCCGGGCTGCGGGGCGTTCCCGCGGCCGTGCCGTCGCCGGTGGACGTGAACATGAC
CATCCAGCTGGGGCTGGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCGTGAACGCGTTCGCGGCGGCCATGA
ACGGCGTGTCGTTCCGGCTGCCGACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGCAACGCGTCCGGGGTGTACACGGCC
GACTTCCCCGACGGCGTGCCGCCCAACGGCACGGCCATGGTGGAGGGCACCAAGGTGAGGAGCCTGCCGTACAACTCGAC
GGTGGAGGTCGTGCTGCAGAACCCGATGGTGTTCCCGTCGGAGAGCCACCCGATCCACCTCCACGGCTTCAACTTCTTCG
TGCTGGCGCAGGGGCTGGGCACCTTCGCCCCCGGCAACGCCAGCGCCTACAACCTGGTCGACCCCGTGGCCCGCAACACC
ATCGCCGTGCCCGCCGGGGGCTGGGCCGTCATCCGCTTCGTCGCCAATAACCCAGGTACTTTCTCCGTCCCT--------
-----------CTATTTCAGCCCAAACTATATGGGCCTTGATTCTAACAG----TGTTAATGATTCGGTGTTTGGGCTT-
-------GCAGGCATGTGGTTCTTCCACTGCCACCTGGACGCGCACGTCCCGATGGGGCTCGGGATGGTGTTCGCGGTGG
AGAACGGGACGACGGCCGACTCCATGCTGCCGCCGCCGCCGGCGGATCTGCCCGTGTGCTAGGGCACGCACGCAAGTTTC
CGGCGCGATTTCACCATGATCTTGCGTGCAAATTTACAGAATTATTTGTTCTTTGTGTGTGTGAAAAAACGCGAGGGGCG
ACGGATCGGATTGTATACGTGTGCAGGGCCGTTGGTTGATTTGCCGCGCG--TGTCTACGGTGAACGTGTGCATGAATTG
GGTTTGGTGTAACAACGTTCTCTTTCTTTGGTGTAAATACCAATGATTATTCAATTTCAGAGGTTCTTTTCCTACTGGAG
GTGTAGATACTATACACATGATGGTTGCATAC------------------------------------------------
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----------------------------CGTGCTGGTCGGAGTGCATGCATGACGTTCTCTTCCTTTGGTGTAAATATAT
GCCGACGATTGAACTTCAGAGGTTCGTATCCTTCTGACGGTGTATGTAGATACT--TACAGGATTGCATATTGT-ACTGA
TTGGAGTGCATGACGTTGGCGATCTTTGAATTTCAATACGTTGATTGAACCAGAGAGTATCTATTATCTACTCCCTCCGT
TCTTAAATGTAAGTCTTTTTAGATATTTCAAGTGGACTACAACATACGAATGTATGTAGACATATTTTAAAGTGTGGATT
CACTCATTTTGCTTCGTCTGTAGGCACTTGTTGAAATCTGTAAAAAGGATTTATATTTAGAAACGAAGGGAGTAGCGAGC
TGGATGAGATGCTACACATGCATCGGCAGATTGGCTGCTTGGCTTGCCT------GGAGGGCAACAACTTG-AATGAGAG
TTCGTCACCAAAGGACAAAGTCGTGTTAGTGACGACTTTGCTGCCGACTTGCCTCGTGTTTCTTTCAGC-AAATGCCGTC
GTCGGTAACGCGTTGCGCTGTTCATGC-GTAACCATCCACGCGGGTTTCCTAGGCTATAGGCTGCATTGGCCTTGACGTC
TTGTGAATACAAATCATCAATACGATGTTGACAGAATACAAGTATGAGAATATATAACATAGTATTATCGAAAAAGACTT
TCGCCCCGTTTTATATATAAAGCATCGACCAACAACACCCCGACACAAATGCACGCCACCACAACACACGCACACACCCA
AGGCAAGATACATAAGCGCTGAGTACAGCAACACCACCCCAAACTACAAGAGCAGTCGGGTCCTCGACCGTGAACACGAC
ACCGCGAAAAGATGAAGCTGCATATGACGAACCGTGGGCTTCAAGGCGGTGCCTTCAGGAAGGATACGACACCGGAGCGC
CGCCACGGCCCGACCTGAGAGTCAGAGTTTCCCCTAGAGC
>chr3D_32
-------------------------------ATCTTCGGGTCCCTTTCCCCT---GTGTCATCTTATGCTGGATGTGCCG
CTTGCTTATCTACACGGTTGGACGACCGTTGTTCGGTTATGCGTGCGTGCTTCCAATTTGGGTTGGGCGTGTTCCTGCAT
GCAGCCCCACAGGGGATTTTGCTGGTTCAGAAAGGCATAACTTGTGGGCATAATCCTCTACTTTTGTCCGCTGTCGACGT
GTTAAGCCCATCCGGCGGAATGTGTGTCAATGCAAGTGCTCTCTGGATTCGGCCATTTGGGGACCAAACCGCCTCCTGGC
ATAGATAATTGGGTGTCGGACCAAATTATTGTGTAGATGACAACAACTTCAAACCCCTCACTGGCTGGGCTGCTAGTTCA
GGTGCGGATGGGATACTCGTGCTTGTACGCTACTACACCTCAGCTTTGAGAGACGCTTTTATTGACACAAATGAGGGGTC
AGCAGGGACACTCTGAGACATGTGATTAGTCCATTTTGGAATGCAGAAATTTT-TCCCATCCAGTTATTTAGCTATGTTG
TCACGTTAGCATGATAGTTCGTCAGAAAACAATATATATCCTGTGCCGAAAAGTAAAACTCCTGATTGCATCCGATGAAA
ACGGCATTTTTTCGCCGACGCGTCGCCATATGCCAGCCGGGAAAGATGATTCGACGGTACTCCTCGAATATAGACCAGCC
CAGGATTGATTTCGGCACTGCAAATCAAAGCCATCCACGAGCT-AGCTAATTAGTCAGAGGACTGTCGACAGGCCGAGTG
GCATGAAAACCTCCCCATCAGACCCACCGGGCCGCATAAAACAATCCGGGTCATCAACACCTAGATTACGAGCGTGTGAG
CGCGCGACATCGCCAGAAGCTTTACGTCGCGATCGCGCGAATTTTAATGGGAAAAGAGGGGGCGCAAATATGCCAGTCGG
ACTGAGCTACGCAAGTGATTCCTCCCGGAGGAGGAGCGCCAAAAGCATCCCTATAGTATATATACCTATCGTGTTTCTTG
GAAGACTT-GAACGATACAAGTTGCCTGGCCAG-GATCGCCAAAGAAAGATTTGCCTTTCCCTCTCTCTGAGACTCTGAC
ACCACCGCCGGTGAATCGTCTTCAACCTCGGAATTCTTCCTCTTCTTCCATGGCGCAGCTTTTGTGGCTGGCGCTCGGGG
TTCTTCTCCTTGCCAGCTCGGTGGCCGACGCGGCGACTGCCAACTACACCTTCACAGTACTTCTCTTTACCTTCTCTCCG
TCCATGCATAAGCG-TTTTATTCATCCAGTTCATCTGAAGTTCATAGATAGAAGCTTTTCGCA---ATAAGAGAACTAGA
GAAACTTCGCCATGCCCATATGTACATGCTCACATACGCCGGCTAGCGGCAACTTACATAGGAGTACTTGACTTAGAGTG
GCTATCAAGAATTCAGAGTCAACTTATATGTTCAGAAAACGGAGAATGCATAGACGATAGACCTGAAAATGTAGATAAAG
TTGGTAA---------------------TTCTGTAGGAG--------------------AGTTCTATACCTATTTTTCTT
GCATATATGCCACCAAATCTATCTAGTATACTTTGCAATCGTGCATACAGTCCTACAAGCCCTTGTCTGACGCCTTTGTT
CCTCTGCAATGCTGCCACCAGGTACAGAGCATGAAAATCAACCAGCTGTGCAACAGCACTGACATCATCGCGGTGAACGG
CCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGACGAGGTGGTCGTCGATGTCATCAACGCGTCGCCGTACAACT
TAACCATCCACTGGTAAAATCCTTA-ACCCCAGCTACACAAAACTTTAAATGTCTGAAACTCTGTTCTTCGAAAAACATA
GAGCCAACATAGAGCCGTTTGCAACCGTTCCAACGGTGGCGTGGGGCACCTGCTGTGTGTCATCTAGCCTCTTGTTTTT-
GAATCAAGCTGGCATCTAGCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGGCAGTTTAGTTTCTG---AGATTAG
TTTGTCTGACTATCTTAGCACCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAAGGGAAGGCTGTGACAATGACGCCC
TACCTTCCGAGGCACCGCCGTTCACTGTAGGCGACCTCATCTGAACACCCTCCAAGTGTGCTCACTGCAGTGTTCAGACG
ACCAAGTCTCGTTATTATT---------------------------------------------ACAAAACGTAGCCAAA
AGGATCACACAAAAAACAGCTACACTTACCGGCCACTGCACTCGAGAAACATTCA--------AACATATTCGTTTCTGT
CTTTCACGCTGTCTGTTTTCCTCTGGCAAAGACAACTGTGGTCGGCATTAAGTGTCAGTGGTCGGCACTTGACTCTGCCG
CCATGTG--------------GTGCTAGGGATTTGAAT-------------TTAACTGATCTTTGGCGGCAGGCACGGCA
TCCTGCAGAAGCTGACGCCATGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCGATCCAGCCCAACGGCTCCTACACG
TACCGGTTCAACGTGACGGGGCACGAGGGCACACTGTGGTGGCACGCGCACTCCTCCTTCCTGCGCGCCACCGTGTACGG
GGCCCTCATCATCCGCCCCCGCAACGGCACCGCCTACCCCTTCCCGGCGCCGGACCAAGAGGTCCCCGTCGTACTTGGTA
ATCA----------------GCAGATACCATTCCTGTCCATTGTATGATAGTGCTGTATT--------GATGGATGGGGA
GGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGTTCCGGACAGGCGAGTGGTGGAGCCAGAATGTCGTCGACGTCGAG
AAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCATCAACGGCCTCACCGGCCAGCTCTACCA
GTGCGCAAGTATGTATTACCGTCTCAGGCCGTGAATTCTGTAACTGCAGGTGAAATTTTATGACTGATGCTGATGTGTGA
CATGATTCATTTGGTTCGTACTGTAGATGAGACGTTCACGGCGGTGGTGCAGCCCAACACGACGGTGCTGCTCCGGGTGA
TCAACGCCGCGCTCAACACGCACCTCTTCTTCAAGGTGGCCGGCCACAACTTCACGGTGGTGGCCGTGGACGCGTGCTAC
ACCGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGCGCTCGTCTACACGGGCGCCGCGCC
GGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCACGGACGCCTCCGACGGCGGCTCCG
TCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCCACGCCCGCCATGCCGGCCATGCCCAACAACTCGGAC
TCCACGACGGCCAACGACTTCTACTCCGGGCTGCGGGGCGTGCCCGCGGCGGTGCCGTCGCCGGTGGACGTGAACATGAC
CATCCAGCTGGGGCTCGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCGTGAACGCGTTCGCGGCGGCGATGA
ACGGCGTGTCGTTCCGGCTGCCCACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGCAACGCGTCCGGGGTGTACACAGCC
GACTTCCCCGACGGCGTGCCGCCCAACGGCACGGCCATGGTGGAGGGCACCAAGGTGAGGAGCCTGCCCTACAACTCGAC
GGTGGAGGTCGTGCTGCAGAACCCGATGGCGTTCCCGTCGGAGAGCCACCCGATCCACCTCCACGGCTTCAACTTCTTCG
TGCTGGCGCAGGGGCTCGGCACCTTCGCCCCGGGCAACGCCAGCGCCTACAACCTGGTCGACCCCGTGGCCCGCAACACC
ATCGCCGTCCCCGCCGGGGGCTGGGCCGTCATCCGCTTCGTCGCCAACAACCCAGGTATATAA-----CCCT--------
-----------CCATTTCGGCCCAAATGATATGGGCCTTGATTGATTTTGCCGCTGCTGATGATTTGGTGTTTGGGCTT-
-------GTAGGCATGTGGTTCTTTCACTGCCACCTGGACGCGCACGTCCCGATGGGGCTCGGGATGGTGTTCGCGGTGG
AGAACGGGACGACGGCCGACTCCATGCTGCCGCCGCCGCCGGCGGATCTGCCCGTGTGCTAGAGGACGCGCGCAAGTTTC
CAGCATGATTTCATCATGATCTTGCGTGCAAATTTACAGAATTAATCGTTCTTTGTGTGTGTAAAAAAACGCGAGGGGCG
A-----CGGATTGTATACGTGTGCAGGGCCGTTGGTTGATTTGT--CGCGCGTGTTTACGGTGAACGTG-ACATGAATTG
GGTTTGGTGTAACAACGTTCTCTTTCTTTGGTGTAAATACCA---ATTATTCAATTTCAGAGGTTCATTTCCTACC-GAG
GTGTACATACTGTACACATGATGATTGAATACGTACTGTACTGATCGAAGTGCATTTTTTTTCAAAAGGGGATCTCCTCG
GCCTCTGCATCAGAATGATGCATACGGCCATCTTATTAACGAAATAAAAGGTTCCAACAAGGTTTCAAAGTCTCCGACTG
AAAAGAAATAAAAAGACAGCTCACACAGAGCTAAAGAGGCTGAGCACACAGACTAACCAAGATAAGACGCCACAACCGGC
TGGCTAAAAATAGATAGGTAAACTAATTGCCTATCCTATTAGATGACCGCCATCCAAACCGGTTGAAGATATCCCGAGCT
ACCATCTCCCAGCGGATAGATCCAGTAACCAAATGCTCCCTGGCCTCCATCGGAGTGAGTAGCGACCATGAACGGATCAC
GGCCGTGGCTCGGAAAATAACCTGCAAAAAATGAATACGTGATATTCTGTTAAAGACCAAATCATTTCTGCAAGTCCAGA
TAGTCCACAACAAAGCGCAAACTCCAACACGAATATGTCTCGCTAATTCAGGCTCAATCCCAGTGAGCCATGTCCCAAAT
AACATAGTGACAGAATTCGGTGGAGTAATATTAAAAGCAATGTGGACCCTCCGCCAAAGTACTCTGGCAAACGGGCAATC
AAAAAAGAGACGTTTGATCGTCTCGTCTCGTCCTGATCGGAGTGCATGCATGACGTTCTCTT-CTTTGGTGTAAATATAT
GCCAACGATTGAACTTCAGAGGTTCGTATCCTTCTGACGGTGTATAATAGATACC--ACAAGATTGCATACTGTAACTGA
TTGGAGTGCATGGCGTTGGCG-TCTTTGAATTTCAATACGTTGATTGAATCGGAGAGTATCTACTATC------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGCGAGC
TGGATAAGATGCTAGGCATGCATCGGCAGATTGGCTGCTTGGCTCACCT------GGAGGGCAACAACTTGAAATGCGAG
TTCGTCACCAGAGGACAAAGTCGTCTCAGTGACGACTTTGCTGCCGACTTGCCTCGTGTTTCTTTCTGCGAAGTGCCGTC
GTCGGTAACGCGTTGCGCTGCTCATGCAGTAACCATCCACGCGGGTTTCGTACGCTATAGGCTGCTTTGGTCTTGACGTC
TTGTGAATACAAATCATCAATATGACGTTGACAGAATAC---TATGAGAATATATAAC----------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr3B_32
-------------------------------ATCTTTGGGTCCCTTTCCCCTCGGGTGTCATCTTATGCTGGATGTGCCG
CTTGCTTATCTACACGGTTGGACGACCGTTGTTCGGTTATGCGTGC----TTCCAATTTGGGTTGGGCGTCCC------T
GCAGCCCAACAGGAGATTTTGTTTGTTCGGAAAGGTATAACTTGTGGGCATAATCCTCCATTTTTGTCCGCTGTTGACGT
GTTAAGCGTATCCGACGGAATGTGTATCAATGCAAGTGCTCTCTGGATTTAGCCATTTGGG-ACCAAACCGCCTTCTGGC
ATAGATAATTGAGTGTCGGACCAAATTATTGTGCACATGACAACAACTTCAAAGCCCTCACTGGCCAGGCTGCTAGTTCA
GGTGCGGATGGGATACTCGCGCTTGTACGCTACTACACCTCAGCTTTGAGAGATGCTTTCATTGACCCAAACGAGGGATC
AGCAGGGACACTCTGAGACATGTGATTAGTCCATTTTGGAATGCAGAAATTTC-TCCCATCCAGTTATTTAGCTATGTTG
TCACGTTAACATGATAGTTCGTCAGAAAACAATATATCCTGTGTCC--AAAAGTAAAACTCCTGATTGCATCCGATGAAA
ACGGCATT-TTTCGCCGACGTGTCGCCATATGCCAGCCGAGAAAGATGATTCGACGGTGCTCCTCGGATATAGAC-----
CAGGATTGATTTCGGCACTGCAAATCAAACCTATCCACGAAACGAGCTAATTATTCAGAGGACTGTCGACAAGCCGAGTG
GCATAAAAACCTCCCCATCAGACCCACCGGGCCGCATAAAACAATCCGGGTCATCAACACCTAGATTACGAGCGTGTGAG
CGCGCGACATCGCCAGAAGCTTTACGTCGCGGTCGCGCAAATTTAAATGGGAAAAGAGGGGGC--AAATATGCCAGTCGG
ACTGAGCTACGCAAGTGATTCCTCCC---GGAGGAGCGCCAAAAGCATCCCTATAGTATATATACCTATCGTGTTTCTTG
GAAGACTTTGAGCAATACAAGTTGCCCGGTCAG-GATCGCCAAAGAAAGATTTGCCTTTCCCTCTCTCTGA--------C
ACCACCGCTGGTGAATCGTCTTCAACCTCGGC---CTTCCTCTTCTTCCATGGCGCAGCTTTTGTGGCTGGCGCTCGGGG
TTCTTCTTCTGGCCAGCTCGGTGGCAGACGCGGCGACTGCCAATTACACGTTCACAGTACTTCTCTTTACCTTCTCTCCG
TCCATGCATAAGAG-TTTTATTCATTCAGTTCATCTGAAGTTCATAGATAGAAGCTTTTCGCA---ATAAGTGAACTAGA
GCAACTTCGCCATGCCCATATGTATATGCTCACATACGCCGGCTAGCGGCAACTTACATG------CTTGACTTACAGTG
GCTATCTAGAATTCAGAGTCAACCTATATGTTCAGAAAACAGAGA------------TAGACCTGAAAATGTAGATAAAG
TTGATAG---------------------TTCTGTAGGAGAGTTGATAGTCATGCAGGACAGTTCTATACCTATTTTTCAT
GTATATGCCACAAAAATCTCTACTTG--TACTTCGGAATCGTGTATACAGTCCTACAAGCCCTTGTCTGACGTCTTTGTT
CCTCTGTAATGCTGCCACCAGGTGCAGAGCATGAAAATTAACCAGCTGTGCAACAGCACTGACATCATTGCGGTGAACGG
CCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGATGAGGTGGTCGTCGATGTGATCAACGCGTCGCCGTACAACT
TAACCATCCACTGGTAAAATCCTTATACCCCAGCTACAGAAAACTTTCAATGTCTGAAACTCTGTTCTTCGAAAAACATA
GAGCC-----------GTCTGCAACCGTTCCAACGGCGGCGTGGGGTACCCGC----TGTCATCTAGCCTCTTGTTTTTT
GAATCAAGCTGTCATCTAGCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGGCAGTTTAGTTTCTCAGAAGATTAG
TTTGTCTGACTATCTTAGCACCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAAGGGAAGGTTCTGAAAATGACACCC
TACCTTCCGAGGCACCGCCGTTAACTGTAGGTGACCTCATCTTAACACCCTCCAAGTGTGCACACCGCAGTGTTCAGACG
ACCAAGTCTCGTCATTACAG--------------------------------TACACGTTTACAACAAAACGTAGCCAAA
AGGATCACACAAAAAACAGCTAAACTTACCGGCTACCCATTCAAACATATATATTTTTAGGATAACATATTTGTTTCTGT
CTTTCACGCTGTCTTTTTTCCTCTGGCAAAGACAACTGAGGTCGGCACTAAGTTTCAGTGGTCGGCACTTGACTCTGCCG
CCATCTGTTATGATT--TGTGGTGCTAGGGATTCAAATTTAACTGAAAAAATTAACTGATCTTTGGCGGCAGGCACGGCA
TACTCCAGAAGCTGACGCCATGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCGATCCAGCCCAACGGCTCCTACACG
TACCGGTTCAACGTGACGGGGCACGAGGGCACGCTGTGGTGGCACGCGCACTCCTCCTTCCTGCGCGCCACCGTGTACGG
CCCCCTCATCATCCGCCCCCGGAACGGCACCGCCTACCCCTTCCCGGCGCCGGACCAAGAGGTCCCCGTCGTACTTGGTA
TAATCAT---CAATCAACACGCATATACCATTCCTGTCCATTGCTCGATAGTATATT-------GATGGATGGATGGGGA
GGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGTTTGGGACAGGCGAGTGGTGGAGCCAGAATGTCGTCGACGTCGAG
AAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCGTTAACGGCCTCACCGGCCAGCTCTACCA
GTGCGCAAGTATGTAACGCG---TCAGACGGTGAATTCTGTAACTTCAGGTGAAATTTACAG-CTGATGGTGATGTGTGA
CATCATTAATTTGGTTCC----GTAGATGAGACGTTCACGGCGGTGGTGCAGCCCAACACGACGGTGCTGCTCCGGGTGA
TCAACGCCGCGCTCAACACGCACCTCTTCTTCAAGGTGGCCGGCCACAACTTCACGGTGGTGGCCGTGGACGCCTGCTAC
ACGGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGCGCTCGTCTATACGGGCGCCGCGCC
GGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCACGGACGCCTCCGACGGCGGCTCCG
TCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCGACGCCCGCCATGCCCACTATGCCGAACAACTCGGAC
TCGACGACGGCCAACGACTTCTACTTCGGGCTGCGGGGCCTGCCCGCGGCCGTGCCGTCGCCGGTGGACGTGAACATGAC
CATCCAGCTGGGGCTGGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCGTGAACGCCTTCGCAGCGGCGATGA
ACGGGGTCTCGTTCCGCCTGCCCACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGCAACGCGTCCGGGGTGTACACCGCC
GACTTCCCCGACGGCGTGCCACCCAACGGCACGGCCATGGTGGAGGGCACCAAGGTGAGGAGCCTGCCCTACAACTCCAC
GGTGGAGATCGTGCTGCAGAACCCTATGGCCTTCCCGTCGGAGAGCCACCCGATCCACCTCCACGGCTTCAACTTCTTCG
TTCTGGCGCAGGGGCTCGGCACCTTCGCCCCGGGCAACACCAGCGCCTACAACCTGGTCGACCCCGTGGCCCGCAACACC
ATCGCCGTGCCCGCCGGAGGCTGGGCCGTCATCCGCTTCGTCGCCAACAACCCAGGTACCGTTACCGTGCTTTCCATACA
TACGTTTCTCCCTATTTCGGCCCAAACTATATGGGCCTTGATTTTAACAG----TGTTAATAATTTGATGTTTGGGCTTT
GACGCGTGTAGGCATGTGGTTCTTCCACTGCCACCTGGACGCGCACGTTCCGATGGGGCTCGGGATGGTGTTCGCGGTGG
AGAACGGGACGACGGCCGACTCCATGCTGCCTCCGCCGCCGGCTGATCTGCCCATGTGCTAGAGCACGCAAGTTTCCA--
--GCGCGATTTCGTCATGATCCTGCGTGCAAGTTTACAGATTTAATTGTTCTTTGTGTGTGTAAAAAAACGCGAGAGGCG
A-----CGGAGCGTATACGTGTGCAGGGCCGTTGGTTGATTTGT--CGCG--TGTTTACGGTGAACGTGTACATGAATTG
GGTTTGGTGTAACAACGTTCTCTTTCTTTGGTGTAAATACCAA--ATGATTCAATTTCAGAGGTTCATTTCCTACC-GAG
TACT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GTACTGATCGGCGTGCATGCATGACGTTCTCTTCCTTTGGTGTAACTATAT
GCCAACGATCGAACTTCAGAGGTTCGTATCATTCTGACGGTGCATAAAGATACTAGTACACGATTGCATATCGT-ACTGA
TTGGAGTGCATGACGATGGC-ATCTTTGAATTTCAATACGTTGATTGATCGGAGAA--------TATC------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGCGAGC
TGGATGAGATGCTACACATGCATCGGCAGATTGGCTGCTTGGCTTACCTGGAGCTGGAGGGCAACAACTTGAAATGCGAG
CTCGTCACCAGAGGACAAAGTCGTCTTAGTGACGACTTTGCTGCCGACTTGCCTCCTGTTTCTTTCTGCAAAGTGCCGTC
GTCGGTAACGCGTTGCGCTGCTCATGCAGTACCCATCCACGCGGGTTTCCTAGGCTATAGGCTGCTTTGGTCTTGACGTC
TTGTGAATACAAATCATCAATACGATGTTGACAGAATAC---TACGAGAATATGTAAC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------------S---------------------S----
--------------------------------------------------S-------S---------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
-------------S------S-----------S-------SS-S----------------S------S------------
-------------------S----------------------------------S-------------------------
------------S----------------------------------------S---------S----------------
--------------S------------------------S-S-S------------------------------------
----------------------------------------------------------------S---------------
-----------------S-----------------------S-------------------SSS----------------
--------------------------------------------------------------------------------
-------------S----------------------S-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------SSS----------------------------------------------
---S---------------------------S-------S--S-------------------------------------
-------------------S----------------------------------------------S--------S----
--------------S---------------------S-------------S-SSSS---SSSSSSS---S----------
-----------S--S-----S-----------------------------------------------------------
-----S----S-------------------------------------S----S--------------------------
-------SSSSSSSSSSSSSSSSSSSSS-------------------------------------------S--------
---------S-----SS----S------------------------------------S---------------S-----
-----------------------------------------------------------S--------------------
---------------------------------------------S--------S-------------------------
-------------------------S-----------------------S-S----------------------------
-------------------------------------------------S------------------------------
--------S---------S------------------------------------------------------S------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
S--------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------------S----S----
--------------------------------------S-------------------------------------S---
-----------------------------S-----S------------------------------------S-------
-----------S---SS---------S-----------------------------------------------------
-S-----------------S---------------------------------------------------S--------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------SSS------S---------S-----------------S-------S--S----SSSS----------------
-----------------------------------S-------------------------------S------------
-----------------------------------------------------------------S--------------
-----------------------SS-------------------------------------------------------
---------------------SS-------------------------------S-------------------------
-------S--------------------------------S---------------------------------------
----------------------------------------------------------------------S---------
------------------------------------------------------------------S---S--------S
--------------------------------------------------------------------------------
------S----------------------------------S--------------------------------------
---------------------------------------------------------------------------S----
----------------------S-----------------------------------------------------S---
--------------------------------------------------------------------S-----------
-----------------------------S--------------------------------------------------
----------------S--------------S------------------------------------------------
-----------------------------------------------S-----------S--SS----------------
------------------S------------------------S---------------------S--------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-S-----------S------------------------------S-----------------S-----------------
-SSSSS-------------------------------------SSS---------S--------------S---------
-------------------------------------------SS---------------------S--------SS---
-----S-----S-----------S---S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---S--------------------------------------------
---S-----------------------------------------SS-------------S-------------------
---------------------------------------------------S-----------S----SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---------------------------------------------S------------------------------S---
----------S-------------S-----------------------------------------S-----S-------
--------------------S--------------------------------------------S----S---------
---------------------------------------SSS----------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_38
------------------GCCCTCCAAACCCATCTTCA------------------------------------------
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>reverse_1970
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-------------------------------------------------ACGCTGTGTGTCATCTAGCC-----------
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>forward_234
--------------------------------------------------------------------------------
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------------------------------------------------------CCTCCATTTTTGTCCGCTGC------
--------------------------------------------------------------------------------
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>reverse_2009
--------------------------------------------------------------------------------
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--------GTGGCATCTACCTAGTTCGCA---------------------------------------------------
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>forward_1074
--------------------------------------------------------------------------------
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--------------ATACAAGTTGCCTGGCCCAA----------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2810
--------------------------------------------------------------------------------
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---------TCAATCACCACGCAGATCCC---------------------------------------------------
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>forward_1220
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TTCTTCTTCTGGCCAGCTCC------------------------------------------------------------
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>reverse_2863
--------------------------------------------------------------------------------
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--------------------------------------------------------------TGGATGGATGGATGGGGA
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_2492
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GTCTGCCG
CCATGTGTTATC--------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_4322
--------------------------------------------------------------------------------
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-GGCGCGATTTCACCATGATC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>forward_4169
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GATTCGGTGTT
TGGGCTTGC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_6137
--------------------------------------------------------------------------------
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--------------------------------------------------------AGGAAGGATACGACACCGGA----
----------------------------------------
