Multiple sequence alignment - TraesCS3A01G361500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G361500 chr3A 100.000 3311 0 0 1 3311 609829970 609826660 0.000000e+00 6115.0
1 TraesCS3A01G361500 chr3B 94.731 1955 62 13 552 2492 620666501 620664574 0.000000e+00 3001.0
2 TraesCS3A01G361500 chr3D 95.734 1641 39 14 852 2492 466755429 466753820 0.000000e+00 2614.0
3 TraesCS3A01G361500 chr3D 93.134 335 14 4 543 870 466756303 466755971 1.790000e-132 483.0
4 TraesCS3A01G361500 chr3D 95.319 235 11 0 309 543 158288961 158288727 1.120000e-99 374.0
5 TraesCS3A01G361500 chr3D 79.216 255 31 17 3020 3260 33315487 33315241 1.230000e-34 158.0
6 TraesCS3A01G361500 chr3D 89.157 83 4 1 68 150 466756383 466756306 7.560000e-17 99.0
7 TraesCS3A01G361500 chr2A 97.710 524 8 4 2527 3048 48479868 48479347 0.000000e+00 898.0
8 TraesCS3A01G361500 chr2A 95.378 238 11 0 306 543 103130465 103130702 2.410000e-101 379.0
9 TraesCS3A01G361500 chr2A 95.359 237 11 0 307 543 733537711 733537475 8.670000e-101 377.0
10 TraesCS3A01G361500 chr2A 93.133 233 6 3 3045 3267 48479051 48478819 1.900000e-87 333.0
11 TraesCS3A01G361500 chr5B 95.088 509 22 1 957 1465 469546571 469546066 0.000000e+00 798.0
12 TraesCS3A01G361500 chr5B 96.914 162 4 1 1501 1661 469546076 469545915 1.510000e-68 270.0
13 TraesCS3A01G361500 chr5D 83.434 664 64 13 1137 1796 412235455 412234834 2.870000e-160 575.0
14 TraesCS3A01G361500 chr5D 94.894 235 12 0 309 543 129481345 129481579 5.220000e-98 368.0
15 TraesCS3A01G361500 chrUn 83.560 663 58 16 1137 1794 32057687 32057071 1.030000e-159 573.0
16 TraesCS3A01G361500 chrUn 94.937 237 12 0 308 544 374428039 374427803 4.040000e-99 372.0
17 TraesCS3A01G361500 chrUn 97.436 39 1 0 68 106 361785420 361785382 2.130000e-07 67.6
18 TraesCS3A01G361500 chrUn 97.436 39 1 0 68 106 366899804 366899766 2.130000e-07 67.6
19 TraesCS3A01G361500 chr4A 82.583 666 59 16 1137 1796 69984504 69983890 4.860000e-148 534.0
20 TraesCS3A01G361500 chr4A 95.319 235 11 0 309 543 99024490 99024256 1.120000e-99 374.0
21 TraesCS3A01G361500 chr4A 75.875 771 141 35 1556 2299 103785101 103785853 5.260000e-93 351.0
22 TraesCS3A01G361500 chr6D 82.229 664 63 23 1137 1796 82568237 82567625 3.790000e-144 521.0
23 TraesCS3A01G361500 chr6B 81.982 666 63 17 1137 1796 86649754 86649140 2.280000e-141 512.0
24 TraesCS3A01G361500 chr6B 81.307 658 66 19 1145 1796 86566257 86566863 6.430000e-132 481.0
25 TraesCS3A01G361500 chr7D 94.894 235 12 0 309 543 45145491 45145725 5.220000e-98 368.0
26 TraesCS3A01G361500 chr2B 94.167 240 14 0 304 543 571527981 571527742 1.880000e-97 366.0
27 TraesCS3A01G361500 chr2B 87.755 147 15 3 2527 2672 184405389 184405533 5.680000e-38 169.0
28 TraesCS3A01G361500 chr7A 94.492 236 11 2 309 543 721097171 721097405 2.430000e-96 363.0
29 TraesCS3A01G361500 chr4D 75.260 768 151 30 1556 2299 360913026 360912274 2.460000e-86 329.0
30 TraesCS3A01G361500 chr4B 74.805 770 151 31 1556 2299 446201227 446200475 1.150000e-79 307.0
31 TraesCS3A01G361500 chr1B 79.675 123 18 4 2568 2683 12123520 12123642 7.620000e-12 82.4
32 TraesCS3A01G361500 chr5A 97.436 39 1 0 68 106 396688733 396688771 2.130000e-07 67.6
33 TraesCS3A01G361500 chr5A 97.436 39 1 0 68 106 445209618 445209656 2.130000e-07 67.6
34 TraesCS3A01G361500 chr5A 97.436 39 1 0 68 106 445215086 445215124 2.130000e-07 67.6
35 TraesCS3A01G361500 chr5A 97.436 39 1 0 68 106 445219395 445219433 2.130000e-07 67.6
36 TraesCS3A01G361500 chr5A 97.436 39 1 0 68 106 445220845 445220883 2.130000e-07 67.6
37 TraesCS3A01G361500 chr5A 90.000 50 4 1 68 116 73823302 73823351 2.760000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G361500 chr3A 609826660 609829970 3310 True 6115.000000 6115 100.0000 1 3311 1 chr3A.!!$R1 3310
1 TraesCS3A01G361500 chr3B 620664574 620666501 1927 True 3001.000000 3001 94.7310 552 2492 1 chr3B.!!$R1 1940
2 TraesCS3A01G361500 chr3D 466753820 466756383 2563 True 1065.333333 2614 92.6750 68 2492 3 chr3D.!!$R3 2424
3 TraesCS3A01G361500 chr2A 48478819 48479868 1049 True 615.500000 898 95.4215 2527 3267 2 chr2A.!!$R2 740
4 TraesCS3A01G361500 chr5B 469545915 469546571 656 True 534.000000 798 96.0010 957 1661 2 chr5B.!!$R1 704
5 TraesCS3A01G361500 chr5D 412234834 412235455 621 True 575.000000 575 83.4340 1137 1796 1 chr5D.!!$R1 659
6 TraesCS3A01G361500 chrUn 32057071 32057687 616 True 573.000000 573 83.5600 1137 1794 1 chrUn.!!$R1 657
7 TraesCS3A01G361500 chr4A 69983890 69984504 614 True 534.000000 534 82.5830 1137 1796 1 chr4A.!!$R1 659
8 TraesCS3A01G361500 chr4A 103785101 103785853 752 False 351.000000 351 75.8750 1556 2299 1 chr4A.!!$F1 743
9 TraesCS3A01G361500 chr6D 82567625 82568237 612 True 521.000000 521 82.2290 1137 1796 1 chr6D.!!$R1 659
10 TraesCS3A01G361500 chr6B 86649140 86649754 614 True 512.000000 512 81.9820 1137 1796 1 chr6B.!!$R1 659
11 TraesCS3A01G361500 chr6B 86566257 86566863 606 False 481.000000 481 81.3070 1145 1796 1 chr6B.!!$F1 651
12 TraesCS3A01G361500 chr4D 360912274 360913026 752 True 329.000000 329 75.2600 1556 2299 1 chr4D.!!$R1 743
13 TraesCS3A01G361500 chr4B 446200475 446201227 752 True 307.000000 307 74.8050 1556 2299 1 chr4B.!!$R1 743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
675 676 0.038618 CTGTGGTAGTACTGCACGCA 60.039 55.0 13.26 12.8 0.0 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 3123 0.108138 GTACACGGCTGGAGATGCTT 60.108 55.0 0.0 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.852091 AATACGAATACGAGAGAGTAACTTTTT 57.148 29.630 0.00 0.00 42.66 1.94
47 48 6.695292 TTTTCCGACTCAAACGTTATAGAC 57.305 37.500 14.73 8.83 0.00 2.59
77 78 5.717078 TTTTGCGGGAGATATATAGACGT 57.283 39.130 0.00 0.00 0.00 4.34
117 118 9.378551 TGTTCACTCATTTCAATAGTACATACC 57.621 33.333 0.00 0.00 0.00 2.73
150 151 8.417106 TCTTAAAGTGAATGGAGTAGCTCATAG 58.583 37.037 0.00 0.00 31.08 2.23
151 152 5.543507 AAGTGAATGGAGTAGCTCATAGG 57.456 43.478 0.00 0.00 31.08 2.57
152 153 4.551671 AGTGAATGGAGTAGCTCATAGGT 58.448 43.478 0.00 0.00 31.08 3.08
153 154 4.586841 AGTGAATGGAGTAGCTCATAGGTC 59.413 45.833 0.00 0.00 31.08 3.85
154 155 3.898123 TGAATGGAGTAGCTCATAGGTCC 59.102 47.826 0.00 0.00 31.08 4.46
155 156 3.913370 ATGGAGTAGCTCATAGGTCCT 57.087 47.619 0.00 0.00 31.08 3.85
156 157 3.689872 TGGAGTAGCTCATAGGTCCTT 57.310 47.619 0.00 0.00 31.08 3.36
157 158 3.995636 TGGAGTAGCTCATAGGTCCTTT 58.004 45.455 0.00 0.00 31.08 3.11
158 159 4.362677 TGGAGTAGCTCATAGGTCCTTTT 58.637 43.478 0.00 0.00 31.08 2.27
159 160 4.783227 TGGAGTAGCTCATAGGTCCTTTTT 59.217 41.667 0.00 0.00 31.08 1.94
160 161 5.119694 GGAGTAGCTCATAGGTCCTTTTTG 58.880 45.833 0.00 0.00 31.08 2.44
161 162 5.338463 GGAGTAGCTCATAGGTCCTTTTTGT 60.338 44.000 0.00 0.00 31.08 2.83
162 163 6.128138 AGTAGCTCATAGGTCCTTTTTGTT 57.872 37.500 0.00 0.00 0.00 2.83
163 164 6.543735 AGTAGCTCATAGGTCCTTTTTGTTT 58.456 36.000 0.00 0.00 0.00 2.83
164 165 5.712152 AGCTCATAGGTCCTTTTTGTTTG 57.288 39.130 0.00 0.00 0.00 2.93
165 166 4.524328 AGCTCATAGGTCCTTTTTGTTTGG 59.476 41.667 0.00 0.00 0.00 3.28
166 167 4.321974 GCTCATAGGTCCTTTTTGTTTGGG 60.322 45.833 0.00 0.00 0.00 4.12
167 168 3.576550 TCATAGGTCCTTTTTGTTTGGGC 59.423 43.478 0.00 0.00 0.00 5.36
168 169 2.174685 AGGTCCTTTTTGTTTGGGCT 57.825 45.000 0.00 0.00 0.00 5.19
169 170 2.477245 AGGTCCTTTTTGTTTGGGCTT 58.523 42.857 0.00 0.00 0.00 4.35
170 171 2.843730 AGGTCCTTTTTGTTTGGGCTTT 59.156 40.909 0.00 0.00 0.00 3.51
171 172 3.265737 AGGTCCTTTTTGTTTGGGCTTTT 59.734 39.130 0.00 0.00 0.00 2.27
172 173 3.376859 GGTCCTTTTTGTTTGGGCTTTTG 59.623 43.478 0.00 0.00 0.00 2.44
173 174 3.013219 TCCTTTTTGTTTGGGCTTTTGC 58.987 40.909 0.00 0.00 46.64 3.68
174 175 3.016031 CCTTTTTGTTTGGGCTTTTGCT 58.984 40.909 0.00 0.00 46.54 3.91
175 176 3.443329 CCTTTTTGTTTGGGCTTTTGCTT 59.557 39.130 0.00 0.00 46.54 3.91
176 177 4.438608 CCTTTTTGTTTGGGCTTTTGCTTC 60.439 41.667 0.00 0.00 46.54 3.86
177 178 3.625649 TTTGTTTGGGCTTTTGCTTCT 57.374 38.095 0.00 0.00 46.54 2.85
178 179 4.744795 TTTGTTTGGGCTTTTGCTTCTA 57.255 36.364 0.00 0.00 46.54 2.10
179 180 3.726291 TGTTTGGGCTTTTGCTTCTAC 57.274 42.857 0.00 0.00 46.54 2.59
180 181 3.295973 TGTTTGGGCTTTTGCTTCTACT 58.704 40.909 0.00 0.00 46.54 2.57
181 182 3.704061 TGTTTGGGCTTTTGCTTCTACTT 59.296 39.130 0.00 0.00 46.54 2.24
182 183 4.161377 TGTTTGGGCTTTTGCTTCTACTTT 59.839 37.500 0.00 0.00 46.54 2.66
183 184 5.116180 GTTTGGGCTTTTGCTTCTACTTTT 58.884 37.500 0.00 0.00 46.54 2.27
184 185 6.127310 TGTTTGGGCTTTTGCTTCTACTTTTA 60.127 34.615 0.00 0.00 46.54 1.52
185 186 6.664428 TTGGGCTTTTGCTTCTACTTTTAT 57.336 33.333 0.00 0.00 46.54 1.40
186 187 6.024552 TGGGCTTTTGCTTCTACTTTTATG 57.975 37.500 0.00 0.00 46.54 1.90
187 188 5.047377 TGGGCTTTTGCTTCTACTTTTATGG 60.047 40.000 0.00 0.00 46.54 2.74
188 189 4.864806 GGCTTTTGCTTCTACTTTTATGGC 59.135 41.667 0.00 0.00 46.54 4.40
189 190 5.336770 GGCTTTTGCTTCTACTTTTATGGCT 60.337 40.000 0.00 0.00 46.54 4.75
190 191 6.159293 GCTTTTGCTTCTACTTTTATGGCTT 58.841 36.000 0.00 0.00 43.35 4.35
191 192 6.646653 GCTTTTGCTTCTACTTTTATGGCTTT 59.353 34.615 0.00 0.00 43.35 3.51
192 193 7.171508 GCTTTTGCTTCTACTTTTATGGCTTTT 59.828 33.333 0.00 0.00 43.35 2.27
193 194 8.956533 TTTTGCTTCTACTTTTATGGCTTTTT 57.043 26.923 0.00 0.00 0.00 1.94
194 195 8.587952 TTTGCTTCTACTTTTATGGCTTTTTC 57.412 30.769 0.00 0.00 0.00 2.29
195 196 7.283625 TGCTTCTACTTTTATGGCTTTTTCA 57.716 32.000 0.00 0.00 0.00 2.69
196 197 7.145323 TGCTTCTACTTTTATGGCTTTTTCAC 58.855 34.615 0.00 0.00 0.00 3.18
197 198 7.014230 TGCTTCTACTTTTATGGCTTTTTCACT 59.986 33.333 0.00 0.00 0.00 3.41
198 199 7.867909 GCTTCTACTTTTATGGCTTTTTCACTT 59.132 33.333 0.00 0.00 0.00 3.16
199 200 9.750125 CTTCTACTTTTATGGCTTTTTCACTTT 57.250 29.630 0.00 0.00 0.00 2.66
200 201 9.528018 TTCTACTTTTATGGCTTTTTCACTTTG 57.472 29.630 0.00 0.00 0.00 2.77
201 202 8.908903 TCTACTTTTATGGCTTTTTCACTTTGA 58.091 29.630 0.00 0.00 0.00 2.69
202 203 9.696917 CTACTTTTATGGCTTTTTCACTTTGAT 57.303 29.630 0.00 0.00 0.00 2.57
203 204 8.593492 ACTTTTATGGCTTTTTCACTTTGATC 57.407 30.769 0.00 0.00 0.00 2.92
204 205 8.203485 ACTTTTATGGCTTTTTCACTTTGATCA 58.797 29.630 0.00 0.00 0.00 2.92
205 206 8.954950 TTTTATGGCTTTTTCACTTTGATCAA 57.045 26.923 3.38 3.38 0.00 2.57
206 207 8.954950 TTTATGGCTTTTTCACTTTGATCAAA 57.045 26.923 19.45 19.45 0.00 2.69
207 208 8.954950 TTATGGCTTTTTCACTTTGATCAAAA 57.045 26.923 20.82 4.71 0.00 2.44
208 209 7.862512 ATGGCTTTTTCACTTTGATCAAAAA 57.137 28.000 20.82 10.50 0.00 1.94
209 210 7.306205 TGGCTTTTTCACTTTGATCAAAAAG 57.694 32.000 20.82 19.07 43.84 2.27
211 212 7.390162 TGGCTTTTTCACTTTGATCAAAAAGTT 59.610 29.630 20.82 4.22 45.84 2.66
212 213 8.878769 GGCTTTTTCACTTTGATCAAAAAGTTA 58.121 29.630 20.82 6.25 45.84 2.24
240 241 6.176014 ACCTCCTATATAGGTGTTTGAAGC 57.824 41.667 25.06 0.00 45.78 3.86
241 242 5.071923 ACCTCCTATATAGGTGTTTGAAGCC 59.928 44.000 25.06 0.00 45.78 4.35
242 243 5.071788 CCTCCTATATAGGTGTTTGAAGCCA 59.928 44.000 25.06 3.87 44.02 4.75
243 244 6.409234 CCTCCTATATAGGTGTTTGAAGCCAA 60.409 42.308 25.06 3.69 44.02 4.52
244 245 6.964464 TCCTATATAGGTGTTTGAAGCCAAA 58.036 36.000 25.06 1.35 44.02 3.28
245 246 7.406916 TCCTATATAGGTGTTTGAAGCCAAAA 58.593 34.615 25.06 0.74 42.43 2.44
246 247 8.058847 TCCTATATAGGTGTTTGAAGCCAAAAT 58.941 33.333 25.06 0.00 42.43 1.82
247 248 9.349713 CCTATATAGGTGTTTGAAGCCAAAATA 57.650 33.333 19.30 0.00 39.87 1.40
253 254 8.831715 AGGTGTTTGAAGCCAAAATAAAATAG 57.168 30.769 0.00 0.00 43.18 1.73
254 255 7.387673 AGGTGTTTGAAGCCAAAATAAAATAGC 59.612 33.333 0.00 0.00 43.18 2.97
255 256 7.387673 GGTGTTTGAAGCCAAAATAAAATAGCT 59.612 33.333 0.00 0.00 43.18 3.32
256 257 8.223100 GTGTTTGAAGCCAAAATAAAATAGCTG 58.777 33.333 0.00 0.00 43.18 4.24
257 258 6.966435 TTGAAGCCAAAATAAAATAGCTGC 57.034 33.333 0.00 0.00 0.00 5.25
258 259 6.035368 TGAAGCCAAAATAAAATAGCTGCA 57.965 33.333 1.02 0.00 33.50 4.41
259 260 6.462500 TGAAGCCAAAATAAAATAGCTGCAA 58.538 32.000 1.02 0.00 32.99 4.08
260 261 6.933521 TGAAGCCAAAATAAAATAGCTGCAAA 59.066 30.769 1.02 0.00 32.99 3.68
261 262 7.443575 TGAAGCCAAAATAAAATAGCTGCAAAA 59.556 29.630 1.02 0.00 32.99 2.44
262 263 7.368480 AGCCAAAATAAAATAGCTGCAAAAG 57.632 32.000 1.02 0.00 0.00 2.27
276 277 4.474113 CTGCAAAAGCAAAAGCAAAAACA 58.526 34.783 0.00 0.00 36.44 2.83
277 278 4.225208 TGCAAAAGCAAAAGCAAAAACAC 58.775 34.783 0.00 0.00 33.48 3.32
278 279 4.225208 GCAAAAGCAAAAGCAAAAACACA 58.775 34.783 0.00 0.00 0.00 3.72
279 280 4.678742 GCAAAAGCAAAAGCAAAAACACAA 59.321 33.333 0.00 0.00 0.00 3.33
280 281 5.174579 GCAAAAGCAAAAGCAAAAACACAAA 59.825 32.000 0.00 0.00 0.00 2.83
281 282 6.570704 CAAAAGCAAAAGCAAAAACACAAAC 58.429 32.000 0.00 0.00 0.00 2.93
282 283 5.429957 AAGCAAAAGCAAAAACACAAACA 57.570 30.435 0.00 0.00 0.00 2.83
283 284 5.429957 AGCAAAAGCAAAAACACAAACAA 57.570 30.435 0.00 0.00 0.00 2.83
284 285 5.825507 AGCAAAAGCAAAAACACAAACAAA 58.174 29.167 0.00 0.00 0.00 2.83
285 286 5.685068 AGCAAAAGCAAAAACACAAACAAAC 59.315 32.000 0.00 0.00 0.00 2.93
286 287 5.456822 GCAAAAGCAAAAACACAAACAAACA 59.543 32.000 0.00 0.00 0.00 2.83
287 288 6.344858 GCAAAAGCAAAAACACAAACAAACAG 60.345 34.615 0.00 0.00 0.00 3.16
288 289 6.610741 AAAGCAAAAACACAAACAAACAGA 57.389 29.167 0.00 0.00 0.00 3.41
289 290 5.590104 AGCAAAAACACAAACAAACAGAC 57.410 34.783 0.00 0.00 0.00 3.51
290 291 5.053145 AGCAAAAACACAAACAAACAGACA 58.947 33.333 0.00 0.00 0.00 3.41
291 292 5.177327 AGCAAAAACACAAACAAACAGACAG 59.823 36.000 0.00 0.00 0.00 3.51
292 293 5.614449 GCAAAAACACAAACAAACAGACAGG 60.614 40.000 0.00 0.00 0.00 4.00
293 294 3.866883 AACACAAACAAACAGACAGGG 57.133 42.857 0.00 0.00 0.00 4.45
294 295 2.802719 ACACAAACAAACAGACAGGGT 58.197 42.857 0.00 0.00 0.00 4.34
295 296 2.491693 ACACAAACAAACAGACAGGGTG 59.508 45.455 0.00 0.00 0.00 4.61
296 297 2.752354 CACAAACAAACAGACAGGGTGA 59.248 45.455 0.00 0.00 0.00 4.02
297 298 3.381272 CACAAACAAACAGACAGGGTGAT 59.619 43.478 0.00 0.00 0.00 3.06
298 299 3.381272 ACAAACAAACAGACAGGGTGATG 59.619 43.478 0.00 0.00 0.00 3.07
299 300 3.576078 AACAAACAGACAGGGTGATGA 57.424 42.857 0.00 0.00 0.00 2.92
300 301 3.795688 ACAAACAGACAGGGTGATGAT 57.204 42.857 0.00 0.00 0.00 2.45
301 302 4.908601 ACAAACAGACAGGGTGATGATA 57.091 40.909 0.00 0.00 0.00 2.15
302 303 5.441718 ACAAACAGACAGGGTGATGATAT 57.558 39.130 0.00 0.00 0.00 1.63
303 304 5.431765 ACAAACAGACAGGGTGATGATATC 58.568 41.667 0.00 0.00 0.00 1.63
304 305 5.045651 ACAAACAGACAGGGTGATGATATCA 60.046 40.000 8.10 8.10 36.84 2.15
305 306 5.901413 AACAGACAGGGTGATGATATCAT 57.099 39.130 18.21 18.21 42.04 2.45
306 307 7.147497 ACAAACAGACAGGGTGATGATATCATA 60.147 37.037 18.19 4.72 42.04 2.15
307 308 7.379059 AACAGACAGGGTGATGATATCATAA 57.621 36.000 18.19 8.52 42.04 1.90
308 309 7.565190 ACAGACAGGGTGATGATATCATAAT 57.435 36.000 18.19 0.00 42.04 1.28
309 310 8.670521 ACAGACAGGGTGATGATATCATAATA 57.329 34.615 18.19 5.55 42.04 0.98
310 311 8.535335 ACAGACAGGGTGATGATATCATAATAC 58.465 37.037 18.19 15.86 42.04 1.89
311 312 8.756927 CAGACAGGGTGATGATATCATAATACT 58.243 37.037 18.19 10.26 42.04 2.12
312 313 8.976353 AGACAGGGTGATGATATCATAATACTC 58.024 37.037 18.19 16.07 42.04 2.59
313 314 8.083828 ACAGGGTGATGATATCATAATACTCC 57.916 38.462 18.19 14.37 42.04 3.85
314 315 7.126421 ACAGGGTGATGATATCATAATACTCCC 59.874 40.741 22.83 22.83 42.04 4.30
315 316 7.346698 CAGGGTGATGATATCATAATACTCCCT 59.653 40.741 25.22 25.22 42.04 4.20
316 317 7.566879 AGGGTGATGATATCATAATACTCCCTC 59.433 40.741 25.22 11.59 42.04 4.30
317 318 7.202047 GGGTGATGATATCATAATACTCCCTCC 60.202 44.444 22.93 16.06 42.04 4.30
318 319 7.429633 GTGATGATATCATAATACTCCCTCCG 58.570 42.308 18.19 0.00 42.04 4.63
319 320 7.068839 GTGATGATATCATAATACTCCCTCCGT 59.931 40.741 18.19 0.00 42.04 4.69
320 321 7.285629 TGATGATATCATAATACTCCCTCCGTC 59.714 40.741 18.19 1.93 36.57 4.79
321 322 6.490492 TGATATCATAATACTCCCTCCGTCA 58.510 40.000 0.00 0.00 0.00 4.35
322 323 6.377429 TGATATCATAATACTCCCTCCGTCAC 59.623 42.308 0.00 0.00 0.00 3.67
323 324 3.905968 TCATAATACTCCCTCCGTCACA 58.094 45.455 0.00 0.00 0.00 3.58
324 325 3.889538 TCATAATACTCCCTCCGTCACAG 59.110 47.826 0.00 0.00 0.00 3.66
325 326 2.233305 AATACTCCCTCCGTCACAGT 57.767 50.000 0.00 0.00 0.00 3.55
326 327 2.233305 ATACTCCCTCCGTCACAGTT 57.767 50.000 0.00 0.00 0.00 3.16
327 328 2.005370 TACTCCCTCCGTCACAGTTT 57.995 50.000 0.00 0.00 0.00 2.66
328 329 2.005370 ACTCCCTCCGTCACAGTTTA 57.995 50.000 0.00 0.00 0.00 2.01
329 330 1.893801 ACTCCCTCCGTCACAGTTTAG 59.106 52.381 0.00 0.00 0.00 1.85
330 331 2.168496 CTCCCTCCGTCACAGTTTAGA 58.832 52.381 0.00 0.00 0.00 2.10
331 332 2.561419 CTCCCTCCGTCACAGTTTAGAA 59.439 50.000 0.00 0.00 0.00 2.10
332 333 2.561419 TCCCTCCGTCACAGTTTAGAAG 59.439 50.000 0.00 0.00 0.00 2.85
333 334 2.353803 CCCTCCGTCACAGTTTAGAAGG 60.354 54.545 0.00 0.00 35.14 3.46
334 335 2.338500 CTCCGTCACAGTTTAGAAGGC 58.662 52.381 0.00 0.00 34.05 4.35
335 336 1.689813 TCCGTCACAGTTTAGAAGGCA 59.310 47.619 0.00 0.00 34.05 4.75
336 337 2.301870 TCCGTCACAGTTTAGAAGGCAT 59.698 45.455 0.00 0.00 34.05 4.40
337 338 3.512329 TCCGTCACAGTTTAGAAGGCATA 59.488 43.478 0.00 0.00 34.05 3.14
338 339 4.020928 TCCGTCACAGTTTAGAAGGCATAA 60.021 41.667 0.00 0.00 34.05 1.90
339 340 4.876107 CCGTCACAGTTTAGAAGGCATAAT 59.124 41.667 0.00 0.00 0.00 1.28
340 341 5.354234 CCGTCACAGTTTAGAAGGCATAATT 59.646 40.000 0.00 0.00 0.00 1.40
341 342 6.537301 CCGTCACAGTTTAGAAGGCATAATTA 59.463 38.462 0.00 0.00 0.00 1.40
342 343 7.065324 CCGTCACAGTTTAGAAGGCATAATTAA 59.935 37.037 0.00 0.00 0.00 1.40
343 344 8.447833 CGTCACAGTTTAGAAGGCATAATTAAA 58.552 33.333 0.00 0.00 0.00 1.52
349 350 9.301153 AGTTTAGAAGGCATAATTAAATTTGCG 57.699 29.630 0.00 0.00 35.95 4.85
350 351 9.083080 GTTTAGAAGGCATAATTAAATTTGCGT 57.917 29.630 0.00 1.46 35.95 5.24
351 352 8.627487 TTAGAAGGCATAATTAAATTTGCGTG 57.373 30.769 0.00 0.00 35.95 5.34
352 353 6.862209 AGAAGGCATAATTAAATTTGCGTGA 58.138 32.000 0.00 0.00 35.95 4.35
353 354 6.974622 AGAAGGCATAATTAAATTTGCGTGAG 59.025 34.615 0.00 0.00 35.95 3.51
354 355 6.207691 AGGCATAATTAAATTTGCGTGAGT 57.792 33.333 0.00 0.00 35.95 3.41
355 356 6.630071 AGGCATAATTAAATTTGCGTGAGTT 58.370 32.000 0.00 0.00 35.95 3.01
356 357 7.096551 AGGCATAATTAAATTTGCGTGAGTTT 58.903 30.769 0.00 0.00 35.95 2.66
357 358 7.275560 AGGCATAATTAAATTTGCGTGAGTTTC 59.724 33.333 0.00 0.00 35.95 2.78
358 359 7.391016 GCATAATTAAATTTGCGTGAGTTTCC 58.609 34.615 0.00 0.00 0.00 3.13
359 360 7.062839 GCATAATTAAATTTGCGTGAGTTTCCA 59.937 33.333 0.00 0.00 0.00 3.53
360 361 6.763303 AATTAAATTTGCGTGAGTTTCCAC 57.237 33.333 0.00 0.00 0.00 4.02
361 362 3.791973 AAATTTGCGTGAGTTTCCACA 57.208 38.095 0.00 0.00 36.89 4.17
362 363 3.791973 AATTTGCGTGAGTTTCCACAA 57.208 38.095 0.00 0.00 36.89 3.33
363 364 4.320608 AATTTGCGTGAGTTTCCACAAT 57.679 36.364 0.00 0.00 36.89 2.71
364 365 5.446143 AATTTGCGTGAGTTTCCACAATA 57.554 34.783 0.00 0.00 36.89 1.90
365 366 4.481930 TTTGCGTGAGTTTCCACAATAG 57.518 40.909 0.00 0.00 36.89 1.73
366 367 3.394674 TGCGTGAGTTTCCACAATAGA 57.605 42.857 0.00 0.00 36.89 1.98
367 368 3.064207 TGCGTGAGTTTCCACAATAGAC 58.936 45.455 0.00 0.00 36.89 2.59
368 369 3.064207 GCGTGAGTTTCCACAATAGACA 58.936 45.455 0.00 0.00 36.89 3.41
369 370 3.496884 GCGTGAGTTTCCACAATAGACAA 59.503 43.478 0.00 0.00 36.89 3.18
370 371 4.377431 GCGTGAGTTTCCACAATAGACAAG 60.377 45.833 0.00 0.00 36.89 3.16
371 372 4.152402 CGTGAGTTTCCACAATAGACAAGG 59.848 45.833 0.00 0.00 36.89 3.61
372 373 5.063880 GTGAGTTTCCACAATAGACAAGGT 58.936 41.667 0.00 0.00 37.04 3.50
373 374 5.531287 GTGAGTTTCCACAATAGACAAGGTT 59.469 40.000 0.00 0.00 37.04 3.50
374 375 6.039382 GTGAGTTTCCACAATAGACAAGGTTT 59.961 38.462 0.00 0.00 37.04 3.27
375 376 7.227910 GTGAGTTTCCACAATAGACAAGGTTTA 59.772 37.037 0.00 0.00 37.04 2.01
376 377 7.444183 TGAGTTTCCACAATAGACAAGGTTTAG 59.556 37.037 0.00 0.00 0.00 1.85
377 378 7.514721 AGTTTCCACAATAGACAAGGTTTAGA 58.485 34.615 0.00 0.00 0.00 2.10
378 379 7.661847 AGTTTCCACAATAGACAAGGTTTAGAG 59.338 37.037 0.00 0.00 0.00 2.43
379 380 5.488341 TCCACAATAGACAAGGTTTAGAGC 58.512 41.667 0.00 0.00 0.00 4.09
380 381 4.330074 CCACAATAGACAAGGTTTAGAGCG 59.670 45.833 0.00 0.00 0.00 5.03
381 382 3.933332 ACAATAGACAAGGTTTAGAGCGC 59.067 43.478 0.00 0.00 0.00 5.92
382 383 3.887621 ATAGACAAGGTTTAGAGCGCA 57.112 42.857 11.47 0.00 0.00 6.09
383 384 2.770164 AGACAAGGTTTAGAGCGCAT 57.230 45.000 11.47 0.00 0.00 4.73
384 385 3.059352 AGACAAGGTTTAGAGCGCATT 57.941 42.857 11.47 0.00 0.00 3.56
385 386 4.202245 AGACAAGGTTTAGAGCGCATTA 57.798 40.909 11.47 0.00 0.00 1.90
386 387 3.933332 AGACAAGGTTTAGAGCGCATTAC 59.067 43.478 11.47 0.00 0.00 1.89
387 388 3.670625 ACAAGGTTTAGAGCGCATTACA 58.329 40.909 11.47 0.00 0.00 2.41
388 389 4.261801 ACAAGGTTTAGAGCGCATTACAT 58.738 39.130 11.47 0.00 0.00 2.29
389 390 4.700213 ACAAGGTTTAGAGCGCATTACATT 59.300 37.500 11.47 1.02 0.00 2.71
390 391 5.183140 ACAAGGTTTAGAGCGCATTACATTT 59.817 36.000 11.47 0.00 0.00 2.32
391 392 6.373216 ACAAGGTTTAGAGCGCATTACATTTA 59.627 34.615 11.47 0.00 0.00 1.40
392 393 7.067008 ACAAGGTTTAGAGCGCATTACATTTAT 59.933 33.333 11.47 0.00 0.00 1.40
393 394 7.568199 AGGTTTAGAGCGCATTACATTTATT 57.432 32.000 11.47 0.00 0.00 1.40
394 395 7.996385 AGGTTTAGAGCGCATTACATTTATTT 58.004 30.769 11.47 0.00 0.00 1.40
395 396 8.129211 AGGTTTAGAGCGCATTACATTTATTTC 58.871 33.333 11.47 0.00 0.00 2.17
396 397 8.129211 GGTTTAGAGCGCATTACATTTATTTCT 58.871 33.333 11.47 0.58 0.00 2.52
399 400 9.542462 TTAGAGCGCATTACATTTATTTCTAGT 57.458 29.630 11.47 0.00 0.00 2.57
401 402 9.197694 AGAGCGCATTACATTTATTTCTAGTAG 57.802 33.333 11.47 0.00 0.00 2.57
402 403 7.797819 AGCGCATTACATTTATTTCTAGTAGC 58.202 34.615 11.47 0.00 0.00 3.58
403 404 7.657761 AGCGCATTACATTTATTTCTAGTAGCT 59.342 33.333 11.47 0.00 0.00 3.32
404 405 8.922676 GCGCATTACATTTATTTCTAGTAGCTA 58.077 33.333 0.30 0.00 0.00 3.32
417 418 9.790344 ATTTCTAGTAGCTAATTAGTACTCCGA 57.210 33.333 21.10 17.46 0.00 4.55
418 419 9.790344 TTTCTAGTAGCTAATTAGTACTCCGAT 57.210 33.333 21.10 8.68 0.00 4.18
439 440 9.914131 TCCGATATACTATTTCTATATGCATGC 57.086 33.333 11.82 11.82 0.00 4.06
440 441 8.854312 CCGATATACTATTTCTATATGCATGCG 58.146 37.037 14.09 0.00 0.00 4.73
441 442 9.399403 CGATATACTATTTCTATATGCATGCGT 57.601 33.333 18.07 18.07 0.00 5.24
445 446 7.818493 ACTATTTCTATATGCATGCGTAGTG 57.182 36.000 23.20 17.51 0.00 2.74
446 447 7.378966 ACTATTTCTATATGCATGCGTAGTGT 58.621 34.615 23.20 10.69 0.00 3.55
447 448 5.905480 TTTCTATATGCATGCGTAGTGTG 57.095 39.130 23.20 13.27 0.00 3.82
448 449 4.846779 TCTATATGCATGCGTAGTGTGA 57.153 40.909 23.20 15.02 0.00 3.58
449 450 5.195001 TCTATATGCATGCGTAGTGTGAA 57.805 39.130 23.20 2.26 0.00 3.18
450 451 5.783111 TCTATATGCATGCGTAGTGTGAAT 58.217 37.500 23.20 9.61 0.00 2.57
451 452 4.737353 ATATGCATGCGTAGTGTGAATG 57.263 40.909 23.20 0.00 0.00 2.67
452 453 0.447406 TGCATGCGTAGTGTGAATGC 59.553 50.000 14.09 0.00 43.08 3.56
453 454 0.729116 GCATGCGTAGTGTGAATGCT 59.271 50.000 0.00 0.00 40.34 3.79
454 455 1.933181 GCATGCGTAGTGTGAATGCTA 59.067 47.619 0.00 0.00 40.34 3.49
455 456 2.545526 GCATGCGTAGTGTGAATGCTAT 59.454 45.455 0.00 0.00 40.34 2.97
456 457 3.002656 GCATGCGTAGTGTGAATGCTATT 59.997 43.478 0.00 0.00 40.34 1.73
457 458 4.496341 GCATGCGTAGTGTGAATGCTATTT 60.496 41.667 0.00 0.00 40.34 1.40
458 459 5.572211 CATGCGTAGTGTGAATGCTATTTT 58.428 37.500 0.00 0.00 0.00 1.82
459 460 5.621197 TGCGTAGTGTGAATGCTATTTTT 57.379 34.783 0.00 0.00 0.00 1.94
477 478 3.517296 TTTTAGCCCATCTCACAACCA 57.483 42.857 0.00 0.00 0.00 3.67
478 479 3.517296 TTTAGCCCATCTCACAACCAA 57.483 42.857 0.00 0.00 0.00 3.67
479 480 3.737559 TTAGCCCATCTCACAACCAAT 57.262 42.857 0.00 0.00 0.00 3.16
480 481 4.853468 TTAGCCCATCTCACAACCAATA 57.147 40.909 0.00 0.00 0.00 1.90
481 482 3.287867 AGCCCATCTCACAACCAATAG 57.712 47.619 0.00 0.00 0.00 1.73
482 483 2.846206 AGCCCATCTCACAACCAATAGA 59.154 45.455 0.00 0.00 0.00 1.98
483 484 3.461085 AGCCCATCTCACAACCAATAGAT 59.539 43.478 0.00 0.00 0.00 1.98
484 485 4.660303 AGCCCATCTCACAACCAATAGATA 59.340 41.667 0.00 0.00 0.00 1.98
485 486 5.132648 AGCCCATCTCACAACCAATAGATAA 59.867 40.000 0.00 0.00 0.00 1.75
486 487 5.239525 GCCCATCTCACAACCAATAGATAAC 59.760 44.000 0.00 0.00 0.00 1.89
487 488 5.765182 CCCATCTCACAACCAATAGATAACC 59.235 44.000 0.00 0.00 0.00 2.85
488 489 6.356556 CCATCTCACAACCAATAGATAACCA 58.643 40.000 0.00 0.00 0.00 3.67
489 490 6.260936 CCATCTCACAACCAATAGATAACCAC 59.739 42.308 0.00 0.00 0.00 4.16
490 491 5.741011 TCTCACAACCAATAGATAACCACC 58.259 41.667 0.00 0.00 0.00 4.61
491 492 4.850680 TCACAACCAATAGATAACCACCC 58.149 43.478 0.00 0.00 0.00 4.61
492 493 4.289934 TCACAACCAATAGATAACCACCCA 59.710 41.667 0.00 0.00 0.00 4.51
493 494 4.640201 CACAACCAATAGATAACCACCCAG 59.360 45.833 0.00 0.00 0.00 4.45
494 495 4.207165 CAACCAATAGATAACCACCCAGG 58.793 47.826 0.00 0.00 45.67 4.45
503 504 4.874521 CCACCCAGGTCTCAGAGA 57.125 61.111 0.00 0.00 0.00 3.10
504 505 3.073228 CCACCCAGGTCTCAGAGAA 57.927 57.895 0.20 0.00 0.00 2.87
505 506 1.577736 CCACCCAGGTCTCAGAGAAT 58.422 55.000 0.20 0.00 0.00 2.40
506 507 1.912043 CCACCCAGGTCTCAGAGAATT 59.088 52.381 0.20 0.00 0.00 2.17
507 508 2.307098 CCACCCAGGTCTCAGAGAATTT 59.693 50.000 0.20 0.00 0.00 1.82
508 509 3.604582 CACCCAGGTCTCAGAGAATTTC 58.395 50.000 0.20 0.00 0.00 2.17
509 510 2.573915 ACCCAGGTCTCAGAGAATTTCC 59.426 50.000 0.20 0.00 0.00 3.13
510 511 2.573462 CCCAGGTCTCAGAGAATTTCCA 59.427 50.000 0.20 0.00 0.00 3.53
511 512 3.009473 CCCAGGTCTCAGAGAATTTCCAA 59.991 47.826 0.20 0.00 0.00 3.53
512 513 4.260170 CCAGGTCTCAGAGAATTTCCAAG 58.740 47.826 0.20 0.00 0.00 3.61
513 514 3.688673 CAGGTCTCAGAGAATTTCCAAGC 59.311 47.826 0.20 0.00 0.00 4.01
514 515 3.328931 AGGTCTCAGAGAATTTCCAAGCA 59.671 43.478 0.20 0.00 0.00 3.91
515 516 3.438434 GGTCTCAGAGAATTTCCAAGCAC 59.562 47.826 0.20 0.00 0.00 4.40
516 517 3.124297 GTCTCAGAGAATTTCCAAGCACG 59.876 47.826 0.20 0.00 0.00 5.34
517 518 3.070018 CTCAGAGAATTTCCAAGCACGT 58.930 45.455 0.00 0.00 0.00 4.49
518 519 3.067106 TCAGAGAATTTCCAAGCACGTC 58.933 45.455 0.00 0.00 0.00 4.34
519 520 3.070018 CAGAGAATTTCCAAGCACGTCT 58.930 45.455 0.00 0.00 0.00 4.18
520 521 3.499918 CAGAGAATTTCCAAGCACGTCTT 59.500 43.478 0.00 0.00 34.78 3.01
521 522 4.023707 CAGAGAATTTCCAAGCACGTCTTT 60.024 41.667 0.00 0.00 31.27 2.52
522 523 4.580580 AGAGAATTTCCAAGCACGTCTTTT 59.419 37.500 0.00 0.00 31.27 2.27
523 524 5.763204 AGAGAATTTCCAAGCACGTCTTTTA 59.237 36.000 0.00 0.00 31.27 1.52
524 525 6.262273 AGAGAATTTCCAAGCACGTCTTTTAA 59.738 34.615 0.00 0.00 31.27 1.52
525 526 6.801575 AGAATTTCCAAGCACGTCTTTTAAA 58.198 32.000 0.00 0.00 31.27 1.52
526 527 6.695713 AGAATTTCCAAGCACGTCTTTTAAAC 59.304 34.615 0.00 0.00 31.27 2.01
527 528 3.974871 TCCAAGCACGTCTTTTAAACC 57.025 42.857 0.00 0.00 31.27 3.27
528 529 2.288458 TCCAAGCACGTCTTTTAAACCG 59.712 45.455 0.00 0.00 31.27 4.44
529 530 2.032426 CCAAGCACGTCTTTTAAACCGT 59.968 45.455 0.00 0.00 31.27 4.83
557 558 5.011738 GGAGGGAGTATCATGGTTAAATCGA 59.988 44.000 0.00 0.00 36.25 3.59
558 559 6.295916 GGAGGGAGTATCATGGTTAAATCGAT 60.296 42.308 0.00 0.00 36.25 3.59
635 636 3.618698 GTGAGCTTCCACGAAAAGTTTC 58.381 45.455 0.00 0.00 0.00 2.78
661 662 8.107399 TCAATTACTCCGTAGATATACTGTGG 57.893 38.462 0.00 0.00 0.00 4.17
675 676 0.038618 CTGTGGTAGTACTGCACGCA 60.039 55.000 13.26 12.80 0.00 5.24
689 690 1.331756 GCACGCATTATTACTGCTGCT 59.668 47.619 16.06 0.00 39.01 4.24
871 1445 4.008933 ACTCCACTCGCCACTGCC 62.009 66.667 0.00 0.00 0.00 4.85
1039 1613 3.589654 TTCGCTTGCCTCGTCCTGG 62.590 63.158 0.00 0.00 0.00 4.45
1190 1764 3.432588 CCTCACCGTCTCGCTCGT 61.433 66.667 0.00 0.00 0.00 4.18
1308 1893 2.026590 AACGCGACGTCCTTTCGT 59.973 55.556 15.93 11.49 46.88 3.85
1475 2079 4.755614 GCTCGCGACGGACGTCTT 62.756 66.667 20.75 2.33 42.54 3.01
1698 2312 2.671682 GACCTGCCCACCTTCCTC 59.328 66.667 0.00 0.00 0.00 3.71
2325 2954 2.069273 CTCTGACGAGATTTGGCGTTT 58.931 47.619 0.00 0.00 41.34 3.60
2356 2985 5.517770 CACGGTGTAAATTAGCAGTAGTACC 59.482 44.000 0.00 0.00 0.00 3.34
2357 2986 5.420104 ACGGTGTAAATTAGCAGTAGTACCT 59.580 40.000 0.00 0.00 0.00 3.08
2358 2987 6.603201 ACGGTGTAAATTAGCAGTAGTACCTA 59.397 38.462 0.00 0.00 0.00 3.08
2404 3033 3.506067 TGTTAGACTGATCGAGCTGACAA 59.494 43.478 14.77 2.42 28.41 3.18
2443 3072 7.805083 ATGGCAATGAACCTATCTATCTACT 57.195 36.000 0.00 0.00 0.00 2.57
2444 3073 6.997655 TGGCAATGAACCTATCTATCTACTG 58.002 40.000 0.00 0.00 0.00 2.74
2445 3074 6.014242 TGGCAATGAACCTATCTATCTACTGG 60.014 42.308 0.00 0.00 0.00 4.00
2446 3075 6.402222 GCAATGAACCTATCTATCTACTGGG 58.598 44.000 0.00 0.00 0.00 4.45
2447 3076 6.211584 GCAATGAACCTATCTATCTACTGGGA 59.788 42.308 0.00 0.00 0.00 4.37
2448 3077 7.093112 GCAATGAACCTATCTATCTACTGGGAT 60.093 40.741 0.00 0.00 0.00 3.85
2449 3078 8.820831 CAATGAACCTATCTATCTACTGGGATT 58.179 37.037 0.00 0.00 0.00 3.01
2450 3079 8.602472 ATGAACCTATCTATCTACTGGGATTC 57.398 38.462 0.00 0.00 0.00 2.52
2474 3103 0.326143 AAGCTCCCTCTTCCTCCCTC 60.326 60.000 0.00 0.00 0.00 4.30
2476 3105 1.074850 CTCCCTCTTCCTCCCTCCC 60.075 68.421 0.00 0.00 0.00 4.30
2502 3131 5.607119 TTTTGACGTCCTAAAAGCATCTC 57.393 39.130 14.12 0.00 0.00 2.75
2503 3132 3.247006 TGACGTCCTAAAAGCATCTCC 57.753 47.619 14.12 0.00 0.00 3.71
2504 3133 2.565391 TGACGTCCTAAAAGCATCTCCA 59.435 45.455 14.12 0.00 0.00 3.86
2505 3134 3.190874 GACGTCCTAAAAGCATCTCCAG 58.809 50.000 3.51 0.00 0.00 3.86
2506 3135 1.936547 CGTCCTAAAAGCATCTCCAGC 59.063 52.381 0.00 0.00 0.00 4.85
2507 3136 2.293170 GTCCTAAAAGCATCTCCAGCC 58.707 52.381 0.00 0.00 0.00 4.85
2508 3137 1.134401 TCCTAAAAGCATCTCCAGCCG 60.134 52.381 0.00 0.00 0.00 5.52
2509 3138 1.407437 CCTAAAAGCATCTCCAGCCGT 60.407 52.381 0.00 0.00 0.00 5.68
2510 3139 1.667724 CTAAAAGCATCTCCAGCCGTG 59.332 52.381 0.00 0.00 0.00 4.94
2511 3140 0.250901 AAAAGCATCTCCAGCCGTGT 60.251 50.000 0.00 0.00 0.00 4.49
2512 3141 0.613260 AAAGCATCTCCAGCCGTGTA 59.387 50.000 0.00 0.00 0.00 2.90
2513 3142 0.108138 AAGCATCTCCAGCCGTGTAC 60.108 55.000 0.00 0.00 0.00 2.90
2514 3143 1.878522 GCATCTCCAGCCGTGTACG 60.879 63.158 0.00 0.00 39.44 3.67
2515 3144 1.807226 CATCTCCAGCCGTGTACGA 59.193 57.895 5.91 0.00 43.02 3.43
2516 3145 0.172578 CATCTCCAGCCGTGTACGAA 59.827 55.000 5.91 0.00 43.02 3.85
2517 3146 0.456221 ATCTCCAGCCGTGTACGAAG 59.544 55.000 5.91 0.00 43.02 3.79
2518 3147 1.805945 CTCCAGCCGTGTACGAAGC 60.806 63.158 5.91 1.82 43.02 3.86
2519 3148 2.048597 CCAGCCGTGTACGAAGCA 60.049 61.111 5.91 0.00 43.02 3.91
2520 3149 2.380410 CCAGCCGTGTACGAAGCAC 61.380 63.158 5.91 0.00 43.02 4.40
2521 3150 2.048503 AGCCGTGTACGAAGCACC 60.049 61.111 5.91 0.00 43.02 5.01
2522 3151 3.475774 GCCGTGTACGAAGCACCG 61.476 66.667 5.91 0.00 43.02 4.94
2523 3152 2.256158 CCGTGTACGAAGCACCGA 59.744 61.111 5.91 0.00 43.02 4.69
2524 3153 1.153901 CCGTGTACGAAGCACCGAT 60.154 57.895 5.91 0.00 43.02 4.18
2525 3154 1.410737 CCGTGTACGAAGCACCGATG 61.411 60.000 5.91 0.00 43.02 3.84
2552 3181 2.302952 CGGCATCACTGATACGGCG 61.303 63.158 4.80 4.80 39.29 6.46
2563 3192 4.038042 CACTGATACGGCGATATGGGATAT 59.962 45.833 16.62 0.00 0.00 1.63
2566 3195 1.568504 ACGGCGATATGGGATATGGT 58.431 50.000 16.62 0.00 0.00 3.55
2794 3423 3.954904 ACGTCAACAGAGTGATAGCCTAT 59.045 43.478 0.00 0.00 0.00 2.57
2905 3534 1.271102 AGACTCGAGTTGGCTCAGTTC 59.729 52.381 21.08 2.30 41.71 3.01
3171 4100 8.137210 TCTTTTCTTTTTAAATCGCAAAAGGG 57.863 30.769 15.27 0.00 39.50 3.95
3207 4137 3.265070 GAGTATCGAAGCCGTATCGTT 57.735 47.619 0.00 0.00 40.99 3.85
3260 4198 3.304391 GCAGTTTTTGAAGTATCGGTGCA 60.304 43.478 0.00 0.00 0.00 4.57
3267 4205 2.052157 GAAGTATCGGTGCATCGTAGC 58.948 52.381 20.53 10.23 0.00 3.58
3268 4206 0.314302 AGTATCGGTGCATCGTAGCC 59.686 55.000 20.53 6.14 0.00 3.93
3269 4207 0.031585 GTATCGGTGCATCGTAGCCA 59.968 55.000 20.53 0.00 0.00 4.75
3270 4208 0.313987 TATCGGTGCATCGTAGCCAG 59.686 55.000 20.53 0.00 0.00 4.85
3271 4209 2.978452 ATCGGTGCATCGTAGCCAGC 62.978 60.000 20.53 0.00 0.00 4.85
3272 4210 2.897350 GGTGCATCGTAGCCAGCC 60.897 66.667 0.00 0.00 0.00 4.85
3273 4211 3.264897 GTGCATCGTAGCCAGCCG 61.265 66.667 0.00 0.00 0.00 5.52
3274 4212 3.770040 TGCATCGTAGCCAGCCGT 61.770 61.111 0.00 0.00 0.00 5.68
3275 4213 3.264897 GCATCGTAGCCAGCCGTG 61.265 66.667 0.00 0.00 0.00 4.94
3276 4214 3.264897 CATCGTAGCCAGCCGTGC 61.265 66.667 0.00 0.00 0.00 5.34
3277 4215 4.530857 ATCGTAGCCAGCCGTGCC 62.531 66.667 0.00 0.00 0.00 5.01
3280 4218 4.410400 GTAGCCAGCCGTGCCCTT 62.410 66.667 0.00 0.00 0.00 3.95
3281 4219 2.685743 TAGCCAGCCGTGCCCTTA 60.686 61.111 0.00 0.00 0.00 2.69
3282 4220 2.731571 TAGCCAGCCGTGCCCTTAG 61.732 63.158 0.00 0.00 0.00 2.18
3284 4222 3.399181 CCAGCCGTGCCCTTAGGA 61.399 66.667 0.00 0.00 33.47 2.94
3285 4223 2.668632 CAGCCGTGCCCTTAGGAA 59.331 61.111 0.00 0.00 33.47 3.36
3286 4224 1.450312 CAGCCGTGCCCTTAGGAAG 60.450 63.158 0.00 0.00 33.47 3.46
3293 4231 2.758207 GCCCTTAGGAAGGCCTCCC 61.758 68.421 5.23 0.58 46.81 4.30
3294 4232 1.307866 CCCTTAGGAAGGCCTCCCA 60.308 63.158 12.16 0.00 46.81 4.37
3295 4233 1.636769 CCCTTAGGAAGGCCTCCCAC 61.637 65.000 12.16 0.00 46.81 4.61
3296 4234 1.522569 CTTAGGAAGGCCTCCCACG 59.477 63.158 12.16 0.00 46.81 4.94
3297 4235 1.229400 TTAGGAAGGCCTCCCACGT 60.229 57.895 12.16 5.29 46.81 4.49
3298 4236 1.550130 TTAGGAAGGCCTCCCACGTG 61.550 60.000 12.16 9.08 46.81 4.49
3299 4237 2.449967 TAGGAAGGCCTCCCACGTGA 62.450 60.000 19.30 0.00 46.81 4.35
3300 4238 2.670148 GGAAGGCCTCCCACGTGAT 61.670 63.158 19.30 0.00 38.44 3.06
3301 4239 1.299976 GAAGGCCTCCCACGTGATT 59.700 57.895 19.30 0.00 0.00 2.57
3302 4240 0.322546 GAAGGCCTCCCACGTGATTT 60.323 55.000 19.30 0.09 0.00 2.17
3303 4241 0.112412 AAGGCCTCCCACGTGATTTT 59.888 50.000 19.30 0.00 0.00 1.82
3304 4242 0.112412 AGGCCTCCCACGTGATTTTT 59.888 50.000 19.30 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.852091 AAAAAGTTACTCTCTCGTATTCGTATT 57.148 29.630 0.00 0.00 38.33 1.89
23 24 6.129115 CGTCTATAACGTTTGAGTCGGAAAAA 60.129 38.462 5.91 0.00 46.42 1.94
24 25 5.343058 CGTCTATAACGTTTGAGTCGGAAAA 59.657 40.000 5.91 0.00 46.42 2.29
25 26 4.853196 CGTCTATAACGTTTGAGTCGGAAA 59.147 41.667 5.91 0.00 46.42 3.13
26 27 4.406069 CGTCTATAACGTTTGAGTCGGAA 58.594 43.478 5.91 0.00 46.42 4.30
27 28 4.007282 CGTCTATAACGTTTGAGTCGGA 57.993 45.455 5.91 0.00 46.42 4.55
54 55 6.092955 ACGTCTATATATCTCCCGCAAAAA 57.907 37.500 0.00 0.00 0.00 1.94
55 56 5.717078 ACGTCTATATATCTCCCGCAAAA 57.283 39.130 0.00 0.00 0.00 2.44
56 57 7.400599 AATACGTCTATATATCTCCCGCAAA 57.599 36.000 0.00 0.00 0.00 3.68
57 58 7.400599 AAATACGTCTATATATCTCCCGCAA 57.599 36.000 0.00 0.00 0.00 4.85
58 59 7.400599 AAAATACGTCTATATATCTCCCGCA 57.599 36.000 0.00 0.00 0.00 5.69
59 60 8.619546 ACTAAAATACGTCTATATATCTCCCGC 58.380 37.037 0.00 0.00 0.00 6.13
60 61 9.932699 CACTAAAATACGTCTATATATCTCCCG 57.067 37.037 0.00 0.00 0.00 5.14
73 74 9.737025 GAGTGAACAAATACACTAAAATACGTC 57.263 33.333 0.00 0.00 45.54 4.34
150 151 3.275617 AAAGCCCAAACAAAAAGGACC 57.724 42.857 0.00 0.00 0.00 4.46
151 152 3.181501 GCAAAAGCCCAAACAAAAAGGAC 60.182 43.478 0.00 0.00 0.00 3.85
152 153 3.013219 GCAAAAGCCCAAACAAAAAGGA 58.987 40.909 0.00 0.00 0.00 3.36
153 154 3.016031 AGCAAAAGCCCAAACAAAAAGG 58.984 40.909 0.00 0.00 0.00 3.11
154 155 4.395854 AGAAGCAAAAGCCCAAACAAAAAG 59.604 37.500 0.00 0.00 0.00 2.27
155 156 4.331108 AGAAGCAAAAGCCCAAACAAAAA 58.669 34.783 0.00 0.00 0.00 1.94
156 157 3.949132 AGAAGCAAAAGCCCAAACAAAA 58.051 36.364 0.00 0.00 0.00 2.44
157 158 3.625649 AGAAGCAAAAGCCCAAACAAA 57.374 38.095 0.00 0.00 0.00 2.83
158 159 3.704061 AGTAGAAGCAAAAGCCCAAACAA 59.296 39.130 0.00 0.00 0.00 2.83
159 160 3.295973 AGTAGAAGCAAAAGCCCAAACA 58.704 40.909 0.00 0.00 0.00 2.83
160 161 4.322080 AAGTAGAAGCAAAAGCCCAAAC 57.678 40.909 0.00 0.00 0.00 2.93
161 162 5.351948 AAAAGTAGAAGCAAAAGCCCAAA 57.648 34.783 0.00 0.00 0.00 3.28
162 163 6.454795 CATAAAAGTAGAAGCAAAAGCCCAA 58.545 36.000 0.00 0.00 0.00 4.12
163 164 5.047377 CCATAAAAGTAGAAGCAAAAGCCCA 60.047 40.000 0.00 0.00 0.00 5.36
164 165 5.410924 CCATAAAAGTAGAAGCAAAAGCCC 58.589 41.667 0.00 0.00 0.00 5.19
165 166 4.864806 GCCATAAAAGTAGAAGCAAAAGCC 59.135 41.667 0.00 0.00 0.00 4.35
166 167 5.714047 AGCCATAAAAGTAGAAGCAAAAGC 58.286 37.500 0.00 0.00 0.00 3.51
167 168 8.593492 AAAAGCCATAAAAGTAGAAGCAAAAG 57.407 30.769 0.00 0.00 0.00 2.27
168 169 8.956533 AAAAAGCCATAAAAGTAGAAGCAAAA 57.043 26.923 0.00 0.00 0.00 2.44
169 170 8.200792 TGAAAAAGCCATAAAAGTAGAAGCAAA 58.799 29.630 0.00 0.00 0.00 3.68
170 171 7.651704 GTGAAAAAGCCATAAAAGTAGAAGCAA 59.348 33.333 0.00 0.00 0.00 3.91
171 172 7.014230 AGTGAAAAAGCCATAAAAGTAGAAGCA 59.986 33.333 0.00 0.00 0.00 3.91
172 173 7.371159 AGTGAAAAAGCCATAAAAGTAGAAGC 58.629 34.615 0.00 0.00 0.00 3.86
173 174 9.750125 AAAGTGAAAAAGCCATAAAAGTAGAAG 57.250 29.630 0.00 0.00 0.00 2.85
174 175 9.528018 CAAAGTGAAAAAGCCATAAAAGTAGAA 57.472 29.630 0.00 0.00 0.00 2.10
175 176 8.908903 TCAAAGTGAAAAAGCCATAAAAGTAGA 58.091 29.630 0.00 0.00 0.00 2.59
176 177 9.696917 ATCAAAGTGAAAAAGCCATAAAAGTAG 57.303 29.630 0.00 0.00 0.00 2.57
177 178 9.691362 GATCAAAGTGAAAAAGCCATAAAAGTA 57.309 29.630 0.00 0.00 0.00 2.24
178 179 8.203485 TGATCAAAGTGAAAAAGCCATAAAAGT 58.797 29.630 0.00 0.00 0.00 2.66
179 180 8.592105 TGATCAAAGTGAAAAAGCCATAAAAG 57.408 30.769 0.00 0.00 0.00 2.27
180 181 8.954950 TTGATCAAAGTGAAAAAGCCATAAAA 57.045 26.923 5.45 0.00 0.00 1.52
181 182 8.954950 TTTGATCAAAGTGAAAAAGCCATAAA 57.045 26.923 16.91 0.00 0.00 1.40
182 183 8.954950 TTTTGATCAAAGTGAAAAAGCCATAA 57.045 26.923 19.64 0.00 0.00 1.90
183 184 8.954950 TTTTTGATCAAAGTGAAAAAGCCATA 57.045 26.923 19.64 0.00 0.00 2.74
184 185 7.553760 ACTTTTTGATCAAAGTGAAAAAGCCAT 59.446 29.630 19.64 3.22 43.88 4.40
185 186 6.878389 ACTTTTTGATCAAAGTGAAAAAGCCA 59.122 30.769 19.64 0.00 43.88 4.75
186 187 7.307493 ACTTTTTGATCAAAGTGAAAAAGCC 57.693 32.000 19.64 0.00 43.88 4.35
214 215 7.556635 GCTTCAAACACCTATATAGGAGGTTTT 59.443 37.037 31.33 21.24 45.40 2.43
215 216 7.054751 GCTTCAAACACCTATATAGGAGGTTT 58.945 38.462 31.53 30.48 45.40 3.27
216 217 6.409349 GGCTTCAAACACCTATATAGGAGGTT 60.409 42.308 31.53 27.65 45.40 3.50
218 219 5.071788 TGGCTTCAAACACCTATATAGGAGG 59.928 44.000 31.53 23.85 46.63 4.30
219 220 6.174720 TGGCTTCAAACACCTATATAGGAG 57.825 41.667 31.53 26.03 46.63 3.69
220 221 6.569127 TTGGCTTCAAACACCTATATAGGA 57.431 37.500 31.53 8.51 46.63 2.94
221 222 7.639113 TTTTGGCTTCAAACACCTATATAGG 57.361 36.000 24.74 24.74 42.96 2.57
227 228 9.921637 CTATTTTATTTTGGCTTCAAACACCTA 57.078 29.630 0.00 0.00 39.77 3.08
228 229 7.387673 GCTATTTTATTTTGGCTTCAAACACCT 59.612 33.333 0.00 0.00 39.77 4.00
229 230 7.387673 AGCTATTTTATTTTGGCTTCAAACACC 59.612 33.333 0.00 0.00 39.77 4.16
230 231 8.223100 CAGCTATTTTATTTTGGCTTCAAACAC 58.777 33.333 0.00 0.00 39.77 3.32
231 232 7.095271 GCAGCTATTTTATTTTGGCTTCAAACA 60.095 33.333 0.00 0.00 39.77 2.83
232 233 7.095271 TGCAGCTATTTTATTTTGGCTTCAAAC 60.095 33.333 0.00 0.00 39.77 2.93
233 234 6.933521 TGCAGCTATTTTATTTTGGCTTCAAA 59.066 30.769 0.00 0.00 38.47 2.69
234 235 6.462500 TGCAGCTATTTTATTTTGGCTTCAA 58.538 32.000 0.00 0.00 0.00 2.69
235 236 6.035368 TGCAGCTATTTTATTTTGGCTTCA 57.965 33.333 0.00 0.00 0.00 3.02
236 237 6.966435 TTGCAGCTATTTTATTTTGGCTTC 57.034 33.333 0.00 0.00 0.00 3.86
237 238 7.573656 GCTTTTGCAGCTATTTTATTTTGGCTT 60.574 33.333 0.00 0.00 46.27 4.35
238 239 6.128200 GCTTTTGCAGCTATTTTATTTTGGCT 60.128 34.615 0.00 0.00 46.27 4.75
239 240 6.023435 GCTTTTGCAGCTATTTTATTTTGGC 58.977 36.000 0.00 0.00 46.27 4.52
263 264 6.909357 TCTGTTTGTTTGTGTTTTTGCTTTTG 59.091 30.769 0.00 0.00 0.00 2.44
264 265 6.909895 GTCTGTTTGTTTGTGTTTTTGCTTTT 59.090 30.769 0.00 0.00 0.00 2.27
265 266 6.037610 TGTCTGTTTGTTTGTGTTTTTGCTTT 59.962 30.769 0.00 0.00 0.00 3.51
266 267 5.525378 TGTCTGTTTGTTTGTGTTTTTGCTT 59.475 32.000 0.00 0.00 0.00 3.91
267 268 5.053145 TGTCTGTTTGTTTGTGTTTTTGCT 58.947 33.333 0.00 0.00 0.00 3.91
268 269 5.335827 TGTCTGTTTGTTTGTGTTTTTGC 57.664 34.783 0.00 0.00 0.00 3.68
269 270 5.107143 CCCTGTCTGTTTGTTTGTGTTTTTG 60.107 40.000 0.00 0.00 0.00 2.44
270 271 4.994217 CCCTGTCTGTTTGTTTGTGTTTTT 59.006 37.500 0.00 0.00 0.00 1.94
271 272 4.039852 ACCCTGTCTGTTTGTTTGTGTTTT 59.960 37.500 0.00 0.00 0.00 2.43
272 273 3.576550 ACCCTGTCTGTTTGTTTGTGTTT 59.423 39.130 0.00 0.00 0.00 2.83
273 274 3.056891 CACCCTGTCTGTTTGTTTGTGTT 60.057 43.478 0.00 0.00 0.00 3.32
274 275 2.491693 CACCCTGTCTGTTTGTTTGTGT 59.508 45.455 0.00 0.00 0.00 3.72
275 276 2.752354 TCACCCTGTCTGTTTGTTTGTG 59.248 45.455 0.00 0.00 0.00 3.33
276 277 3.080300 TCACCCTGTCTGTTTGTTTGT 57.920 42.857 0.00 0.00 0.00 2.83
277 278 3.631686 TCATCACCCTGTCTGTTTGTTTG 59.368 43.478 0.00 0.00 0.00 2.93
278 279 3.897239 TCATCACCCTGTCTGTTTGTTT 58.103 40.909 0.00 0.00 0.00 2.83
279 280 3.576078 TCATCACCCTGTCTGTTTGTT 57.424 42.857 0.00 0.00 0.00 2.83
280 281 3.795688 ATCATCACCCTGTCTGTTTGT 57.204 42.857 0.00 0.00 0.00 2.83
281 282 5.430886 TGATATCATCACCCTGTCTGTTTG 58.569 41.667 0.00 0.00 33.59 2.93
282 283 5.698741 TGATATCATCACCCTGTCTGTTT 57.301 39.130 0.00 0.00 33.59 2.83
283 284 5.901413 ATGATATCATCACCCTGTCTGTT 57.099 39.130 12.62 0.00 43.01 3.16
284 285 7.565190 ATTATGATATCATCACCCTGTCTGT 57.435 36.000 21.42 0.00 43.01 3.41
285 286 8.756927 AGTATTATGATATCATCACCCTGTCTG 58.243 37.037 21.42 0.00 43.01 3.51
286 287 8.907829 AGTATTATGATATCATCACCCTGTCT 57.092 34.615 21.42 8.02 43.01 3.41
287 288 8.200792 GGAGTATTATGATATCATCACCCTGTC 58.799 40.741 21.42 10.59 43.01 3.51
288 289 7.126421 GGGAGTATTATGATATCATCACCCTGT 59.874 40.741 21.42 0.00 43.01 4.00
289 290 7.346698 AGGGAGTATTATGATATCATCACCCTG 59.653 40.741 26.07 0.00 43.01 4.45
290 291 7.434201 AGGGAGTATTATGATATCATCACCCT 58.566 38.462 23.39 23.39 43.01 4.34
291 292 7.202047 GGAGGGAGTATTATGATATCATCACCC 60.202 44.444 21.42 21.06 43.01 4.61
292 293 7.470702 CGGAGGGAGTATTATGATATCATCACC 60.471 44.444 21.42 14.09 43.01 4.02
293 294 7.068839 ACGGAGGGAGTATTATGATATCATCAC 59.931 40.741 21.42 16.57 43.01 3.06
294 295 7.126061 ACGGAGGGAGTATTATGATATCATCA 58.874 38.462 21.42 11.70 44.55 3.07
295 296 7.285629 TGACGGAGGGAGTATTATGATATCATC 59.714 40.741 21.42 7.30 37.76 2.92
296 297 7.068839 GTGACGGAGGGAGTATTATGATATCAT 59.931 40.741 21.50 21.50 40.22 2.45
297 298 6.377429 GTGACGGAGGGAGTATTATGATATCA 59.623 42.308 8.10 8.10 0.00 2.15
298 299 6.377429 TGTGACGGAGGGAGTATTATGATATC 59.623 42.308 0.00 0.00 0.00 1.63
299 300 6.253758 TGTGACGGAGGGAGTATTATGATAT 58.746 40.000 0.00 0.00 0.00 1.63
300 301 5.637127 TGTGACGGAGGGAGTATTATGATA 58.363 41.667 0.00 0.00 0.00 2.15
301 302 4.480115 TGTGACGGAGGGAGTATTATGAT 58.520 43.478 0.00 0.00 0.00 2.45
302 303 3.889538 CTGTGACGGAGGGAGTATTATGA 59.110 47.826 0.00 0.00 0.00 2.15
303 304 3.637229 ACTGTGACGGAGGGAGTATTATG 59.363 47.826 0.00 0.00 0.00 1.90
304 305 3.912248 ACTGTGACGGAGGGAGTATTAT 58.088 45.455 0.00 0.00 0.00 1.28
305 306 3.377253 ACTGTGACGGAGGGAGTATTA 57.623 47.619 0.00 0.00 0.00 0.98
306 307 2.233305 ACTGTGACGGAGGGAGTATT 57.767 50.000 0.00 0.00 0.00 1.89
307 308 2.233305 AACTGTGACGGAGGGAGTAT 57.767 50.000 0.00 0.00 0.00 2.12
308 309 2.005370 AAACTGTGACGGAGGGAGTA 57.995 50.000 0.00 0.00 0.00 2.59
309 310 1.893801 CTAAACTGTGACGGAGGGAGT 59.106 52.381 0.00 0.00 0.00 3.85
310 311 2.168496 TCTAAACTGTGACGGAGGGAG 58.832 52.381 0.00 0.00 0.00 4.30
311 312 2.297698 TCTAAACTGTGACGGAGGGA 57.702 50.000 0.00 0.00 0.00 4.20
312 313 2.353803 CCTTCTAAACTGTGACGGAGGG 60.354 54.545 0.00 0.00 0.00 4.30
313 314 2.931320 GCCTTCTAAACTGTGACGGAGG 60.931 54.545 0.00 0.00 0.00 4.30
314 315 2.288825 TGCCTTCTAAACTGTGACGGAG 60.289 50.000 0.00 0.00 0.00 4.63
315 316 1.689813 TGCCTTCTAAACTGTGACGGA 59.310 47.619 0.00 0.00 0.00 4.69
316 317 2.163818 TGCCTTCTAAACTGTGACGG 57.836 50.000 0.00 0.00 0.00 4.79
317 318 6.422776 AATTATGCCTTCTAAACTGTGACG 57.577 37.500 0.00 0.00 0.00 4.35
323 324 9.301153 CGCAAATTTAATTATGCCTTCTAAACT 57.699 29.630 14.34 0.00 35.41 2.66
324 325 9.083080 ACGCAAATTTAATTATGCCTTCTAAAC 57.917 29.630 14.34 0.00 35.41 2.01
325 326 9.081997 CACGCAAATTTAATTATGCCTTCTAAA 57.918 29.630 14.34 0.00 35.41 1.85
326 327 8.462811 TCACGCAAATTTAATTATGCCTTCTAA 58.537 29.630 14.34 0.00 35.41 2.10
327 328 7.990917 TCACGCAAATTTAATTATGCCTTCTA 58.009 30.769 14.34 1.14 35.41 2.10
328 329 6.862209 TCACGCAAATTTAATTATGCCTTCT 58.138 32.000 14.34 0.18 35.41 2.85
329 330 6.751888 ACTCACGCAAATTTAATTATGCCTTC 59.248 34.615 14.34 0.00 35.41 3.46
330 331 6.630071 ACTCACGCAAATTTAATTATGCCTT 58.370 32.000 14.34 4.69 35.41 4.35
331 332 6.207691 ACTCACGCAAATTTAATTATGCCT 57.792 33.333 14.34 5.52 35.41 4.75
332 333 6.885735 AACTCACGCAAATTTAATTATGCC 57.114 33.333 14.34 3.67 35.41 4.40
333 334 7.062839 TGGAAACTCACGCAAATTTAATTATGC 59.937 33.333 11.80 11.80 35.49 3.14
334 335 8.372521 GTGGAAACTCACGCAAATTTAATTATG 58.627 33.333 0.00 0.00 0.00 1.90
335 336 8.085296 TGTGGAAACTCACGCAAATTTAATTAT 58.915 29.630 0.00 0.00 40.31 1.28
336 337 7.426410 TGTGGAAACTCACGCAAATTTAATTA 58.574 30.769 0.00 0.00 40.31 1.40
337 338 6.276847 TGTGGAAACTCACGCAAATTTAATT 58.723 32.000 0.00 0.00 40.31 1.40
338 339 5.837437 TGTGGAAACTCACGCAAATTTAAT 58.163 33.333 0.00 0.00 40.31 1.40
339 340 5.250235 TGTGGAAACTCACGCAAATTTAA 57.750 34.783 0.00 0.00 40.31 1.52
340 341 4.902443 TGTGGAAACTCACGCAAATTTA 57.098 36.364 0.00 0.00 40.31 1.40
341 342 3.791973 TGTGGAAACTCACGCAAATTT 57.208 38.095 0.00 0.00 40.31 1.82
342 343 3.791973 TTGTGGAAACTCACGCAAATT 57.208 38.095 0.00 0.00 40.31 1.82
343 344 4.759693 TCTATTGTGGAAACTCACGCAAAT 59.240 37.500 0.00 0.00 40.07 2.32
344 345 4.024387 GTCTATTGTGGAAACTCACGCAAA 60.024 41.667 0.00 0.00 40.07 3.68
345 346 3.496884 GTCTATTGTGGAAACTCACGCAA 59.503 43.478 0.00 0.00 40.31 4.85
346 347 3.064207 GTCTATTGTGGAAACTCACGCA 58.936 45.455 0.00 0.00 40.31 5.24
347 348 3.064207 TGTCTATTGTGGAAACTCACGC 58.936 45.455 0.00 0.00 40.31 5.34
348 349 4.152402 CCTTGTCTATTGTGGAAACTCACG 59.848 45.833 0.00 0.00 40.31 4.35
349 350 5.063880 ACCTTGTCTATTGTGGAAACTCAC 58.936 41.667 0.00 0.00 38.09 3.51
350 351 5.304686 ACCTTGTCTATTGTGGAAACTCA 57.695 39.130 0.00 0.00 0.00 3.41
351 352 6.635030 AAACCTTGTCTATTGTGGAAACTC 57.365 37.500 0.00 0.00 0.00 3.01
352 353 7.514721 TCTAAACCTTGTCTATTGTGGAAACT 58.485 34.615 0.00 0.00 0.00 2.66
353 354 7.573283 GCTCTAAACCTTGTCTATTGTGGAAAC 60.573 40.741 0.00 0.00 0.00 2.78
354 355 6.430000 GCTCTAAACCTTGTCTATTGTGGAAA 59.570 38.462 0.00 0.00 0.00 3.13
355 356 5.938125 GCTCTAAACCTTGTCTATTGTGGAA 59.062 40.000 0.00 0.00 0.00 3.53
356 357 5.488341 GCTCTAAACCTTGTCTATTGTGGA 58.512 41.667 0.00 0.00 0.00 4.02
357 358 4.330074 CGCTCTAAACCTTGTCTATTGTGG 59.670 45.833 0.00 0.00 0.00 4.17
358 359 4.201724 GCGCTCTAAACCTTGTCTATTGTG 60.202 45.833 0.00 0.00 0.00 3.33
359 360 3.933332 GCGCTCTAAACCTTGTCTATTGT 59.067 43.478 0.00 0.00 0.00 2.71
360 361 3.932710 TGCGCTCTAAACCTTGTCTATTG 59.067 43.478 9.73 0.00 0.00 1.90
361 362 4.202245 TGCGCTCTAAACCTTGTCTATT 57.798 40.909 9.73 0.00 0.00 1.73
362 363 3.887621 TGCGCTCTAAACCTTGTCTAT 57.112 42.857 9.73 0.00 0.00 1.98
363 364 3.887621 ATGCGCTCTAAACCTTGTCTA 57.112 42.857 9.73 0.00 0.00 2.59
364 365 2.770164 ATGCGCTCTAAACCTTGTCT 57.230 45.000 9.73 0.00 0.00 3.41
365 366 3.682858 TGTAATGCGCTCTAAACCTTGTC 59.317 43.478 9.73 0.00 0.00 3.18
366 367 3.670625 TGTAATGCGCTCTAAACCTTGT 58.329 40.909 9.73 0.00 0.00 3.16
367 368 4.882671 ATGTAATGCGCTCTAAACCTTG 57.117 40.909 9.73 0.00 0.00 3.61
368 369 5.897377 AAATGTAATGCGCTCTAAACCTT 57.103 34.783 9.73 0.00 0.00 3.50
369 370 7.568199 AATAAATGTAATGCGCTCTAAACCT 57.432 32.000 9.73 0.00 0.00 3.50
370 371 8.129211 AGAAATAAATGTAATGCGCTCTAAACC 58.871 33.333 9.73 0.00 0.00 3.27
373 374 9.542462 ACTAGAAATAAATGTAATGCGCTCTAA 57.458 29.630 9.73 0.00 0.00 2.10
375 376 9.197694 CTACTAGAAATAAATGTAATGCGCTCT 57.802 33.333 9.73 0.00 0.00 4.09
376 377 7.952637 GCTACTAGAAATAAATGTAATGCGCTC 59.047 37.037 9.73 0.00 0.00 5.03
377 378 7.657761 AGCTACTAGAAATAAATGTAATGCGCT 59.342 33.333 9.73 0.00 0.00 5.92
378 379 7.797819 AGCTACTAGAAATAAATGTAATGCGC 58.202 34.615 0.00 0.00 0.00 6.09
391 392 9.790344 TCGGAGTACTAATTAGCTACTAGAAAT 57.210 33.333 19.17 0.00 0.00 2.17
392 393 9.790344 ATCGGAGTACTAATTAGCTACTAGAAA 57.210 33.333 19.17 11.04 0.00 2.52
413 414 9.914131 GCATGCATATAGAAATAGTATATCGGA 57.086 33.333 14.21 0.00 0.00 4.55
414 415 8.854312 CGCATGCATATAGAAATAGTATATCGG 58.146 37.037 19.57 0.00 0.00 4.18
415 416 9.399403 ACGCATGCATATAGAAATAGTATATCG 57.601 33.333 19.57 0.00 0.00 2.92
419 420 9.521503 CACTACGCATGCATATAGAAATAGTAT 57.478 33.333 19.57 0.00 0.00 2.12
420 421 8.520351 ACACTACGCATGCATATAGAAATAGTA 58.480 33.333 19.57 6.04 0.00 1.82
421 422 7.329471 CACACTACGCATGCATATAGAAATAGT 59.671 37.037 19.57 5.11 0.00 2.12
422 423 7.542130 TCACACTACGCATGCATATAGAAATAG 59.458 37.037 19.57 6.89 0.00 1.73
423 424 7.375053 TCACACTACGCATGCATATAGAAATA 58.625 34.615 19.57 3.27 0.00 1.40
424 425 6.223120 TCACACTACGCATGCATATAGAAAT 58.777 36.000 19.57 4.78 0.00 2.17
425 426 5.596845 TCACACTACGCATGCATATAGAAA 58.403 37.500 19.57 0.00 0.00 2.52
426 427 5.195001 TCACACTACGCATGCATATAGAA 57.805 39.130 19.57 2.99 0.00 2.10
427 428 4.846779 TCACACTACGCATGCATATAGA 57.153 40.909 19.57 3.38 0.00 1.98
428 429 5.669602 GCATTCACACTACGCATGCATATAG 60.670 44.000 19.57 17.15 40.06 1.31
429 430 4.152223 GCATTCACACTACGCATGCATATA 59.848 41.667 19.57 5.83 40.06 0.86
430 431 3.058708 GCATTCACACTACGCATGCATAT 60.059 43.478 19.57 4.84 40.06 1.78
431 432 2.287644 GCATTCACACTACGCATGCATA 59.712 45.455 19.57 5.77 40.06 3.14
432 433 1.064505 GCATTCACACTACGCATGCAT 59.935 47.619 19.57 4.54 40.06 3.96
433 434 0.447406 GCATTCACACTACGCATGCA 59.553 50.000 19.57 0.00 40.06 3.96
434 435 0.729116 AGCATTCACACTACGCATGC 59.271 50.000 7.91 7.91 40.53 4.06
435 436 4.801147 AATAGCATTCACACTACGCATG 57.199 40.909 0.00 0.00 0.00 4.06
436 437 5.818136 AAAATAGCATTCACACTACGCAT 57.182 34.783 0.00 0.00 0.00 4.73
437 438 5.621197 AAAAATAGCATTCACACTACGCA 57.379 34.783 0.00 0.00 0.00 5.24
456 457 3.838565 TGGTTGTGAGATGGGCTAAAAA 58.161 40.909 0.00 0.00 0.00 1.94
457 458 3.517296 TGGTTGTGAGATGGGCTAAAA 57.483 42.857 0.00 0.00 0.00 1.52
458 459 3.517296 TTGGTTGTGAGATGGGCTAAA 57.483 42.857 0.00 0.00 0.00 1.85
459 460 3.737559 ATTGGTTGTGAGATGGGCTAA 57.262 42.857 0.00 0.00 0.00 3.09
460 461 4.037222 TCTATTGGTTGTGAGATGGGCTA 58.963 43.478 0.00 0.00 0.00 3.93
461 462 2.846206 TCTATTGGTTGTGAGATGGGCT 59.154 45.455 0.00 0.00 0.00 5.19
462 463 3.281727 TCTATTGGTTGTGAGATGGGC 57.718 47.619 0.00 0.00 0.00 5.36
463 464 5.765182 GGTTATCTATTGGTTGTGAGATGGG 59.235 44.000 0.00 0.00 31.25 4.00
464 465 6.260936 GTGGTTATCTATTGGTTGTGAGATGG 59.739 42.308 0.00 0.00 31.25 3.51
465 466 6.260936 GGTGGTTATCTATTGGTTGTGAGATG 59.739 42.308 0.00 0.00 31.25 2.90
466 467 6.357367 GGTGGTTATCTATTGGTTGTGAGAT 58.643 40.000 0.00 0.00 33.32 2.75
467 468 5.338871 GGGTGGTTATCTATTGGTTGTGAGA 60.339 44.000 0.00 0.00 0.00 3.27
468 469 4.881850 GGGTGGTTATCTATTGGTTGTGAG 59.118 45.833 0.00 0.00 0.00 3.51
469 470 4.289934 TGGGTGGTTATCTATTGGTTGTGA 59.710 41.667 0.00 0.00 0.00 3.58
470 471 4.594970 TGGGTGGTTATCTATTGGTTGTG 58.405 43.478 0.00 0.00 0.00 3.33
471 472 4.325030 CCTGGGTGGTTATCTATTGGTTGT 60.325 45.833 0.00 0.00 0.00 3.32
472 473 4.207165 CCTGGGTGGTTATCTATTGGTTG 58.793 47.826 0.00 0.00 0.00 3.77
473 474 4.519906 CCTGGGTGGTTATCTATTGGTT 57.480 45.455 0.00 0.00 0.00 3.67
486 487 1.577736 ATTCTCTGAGACCTGGGTGG 58.422 55.000 6.92 0.00 42.93 4.61
487 488 3.604582 GAAATTCTCTGAGACCTGGGTG 58.395 50.000 6.92 0.00 0.00 4.61
488 489 2.573915 GGAAATTCTCTGAGACCTGGGT 59.426 50.000 6.92 0.00 0.00 4.51
489 490 2.573462 TGGAAATTCTCTGAGACCTGGG 59.427 50.000 6.92 0.00 0.00 4.45
490 491 3.988976 TGGAAATTCTCTGAGACCTGG 57.011 47.619 6.92 0.00 0.00 4.45
491 492 3.688673 GCTTGGAAATTCTCTGAGACCTG 59.311 47.826 6.92 4.53 0.00 4.00
492 493 3.328931 TGCTTGGAAATTCTCTGAGACCT 59.671 43.478 6.92 0.00 0.00 3.85
493 494 3.438434 GTGCTTGGAAATTCTCTGAGACC 59.562 47.826 6.92 6.00 0.00 3.85
494 495 3.124297 CGTGCTTGGAAATTCTCTGAGAC 59.876 47.826 6.92 0.00 0.00 3.36
495 496 3.244215 ACGTGCTTGGAAATTCTCTGAGA 60.244 43.478 2.58 2.58 0.00 3.27
496 497 3.070018 ACGTGCTTGGAAATTCTCTGAG 58.930 45.455 0.00 0.00 0.00 3.35
497 498 3.067106 GACGTGCTTGGAAATTCTCTGA 58.933 45.455 0.00 0.00 0.00 3.27
498 499 3.070018 AGACGTGCTTGGAAATTCTCTG 58.930 45.455 0.00 0.00 0.00 3.35
499 500 3.409026 AGACGTGCTTGGAAATTCTCT 57.591 42.857 0.00 0.00 0.00 3.10
500 501 4.489679 AAAGACGTGCTTGGAAATTCTC 57.510 40.909 0.00 0.00 36.80 2.87
501 502 4.918810 AAAAGACGTGCTTGGAAATTCT 57.081 36.364 0.00 0.00 36.80 2.40
502 503 6.074516 GGTTTAAAAGACGTGCTTGGAAATTC 60.075 38.462 0.00 0.00 36.80 2.17
503 504 5.751509 GGTTTAAAAGACGTGCTTGGAAATT 59.248 36.000 0.00 0.00 36.80 1.82
504 505 5.286438 GGTTTAAAAGACGTGCTTGGAAAT 58.714 37.500 0.00 0.00 36.80 2.17
505 506 4.674475 GGTTTAAAAGACGTGCTTGGAAA 58.326 39.130 0.00 0.00 36.80 3.13
506 507 3.242804 CGGTTTAAAAGACGTGCTTGGAA 60.243 43.478 0.00 0.00 36.80 3.53
507 508 2.288458 CGGTTTAAAAGACGTGCTTGGA 59.712 45.455 0.00 0.00 36.80 3.53
508 509 2.032426 ACGGTTTAAAAGACGTGCTTGG 59.968 45.455 11.50 0.00 38.24 3.61
509 510 3.328237 ACGGTTTAAAAGACGTGCTTG 57.672 42.857 11.50 0.00 38.24 4.01
527 528 1.001268 CATGATACTCCCTCCGTCACG 60.001 57.143 0.00 0.00 0.00 4.35
528 529 1.341531 CCATGATACTCCCTCCGTCAC 59.658 57.143 0.00 0.00 0.00 3.67
529 530 1.063190 ACCATGATACTCCCTCCGTCA 60.063 52.381 0.00 0.00 0.00 4.35
530 531 1.705873 ACCATGATACTCCCTCCGTC 58.294 55.000 0.00 0.00 0.00 4.79
531 532 2.176247 AACCATGATACTCCCTCCGT 57.824 50.000 0.00 0.00 0.00 4.69
532 533 4.682778 TTTAACCATGATACTCCCTCCG 57.317 45.455 0.00 0.00 0.00 4.63
533 534 5.011738 TCGATTTAACCATGATACTCCCTCC 59.988 44.000 0.00 0.00 0.00 4.30
534 535 6.097915 TCGATTTAACCATGATACTCCCTC 57.902 41.667 0.00 0.00 0.00 4.30
535 536 6.572509 CGATCGATTTAACCATGATACTCCCT 60.573 42.308 10.26 0.00 0.00 4.20
536 537 5.577164 CGATCGATTTAACCATGATACTCCC 59.423 44.000 10.26 0.00 0.00 4.30
537 538 6.157211 ACGATCGATTTAACCATGATACTCC 58.843 40.000 24.34 0.00 0.00 3.85
538 539 7.639162 AACGATCGATTTAACCATGATACTC 57.361 36.000 24.34 0.00 0.00 2.59
539 540 9.537192 TTAAACGATCGATTTAACCATGATACT 57.463 29.630 24.34 0.00 0.00 2.12
574 575 2.224305 CCGGTAGGCCTCCTCTATTTTG 60.224 54.545 9.68 0.00 34.61 2.44
635 636 8.237949 CCACAGTATATCTACGGAGTAATTGAG 58.762 40.741 0.00 0.00 45.13 3.02
654 655 1.200716 GCGTGCAGTACTACCACAGTA 59.799 52.381 19.76 0.00 38.80 2.74
655 656 0.038526 GCGTGCAGTACTACCACAGT 60.039 55.000 19.76 0.00 41.62 3.55
661 662 5.332355 GCAGTAATAATGCGTGCAGTACTAC 60.332 44.000 11.56 11.56 31.96 2.73
675 676 6.414732 TGAGGTTTACAGCAGCAGTAATAAT 58.585 36.000 10.90 0.96 32.07 1.28
689 690 0.602638 CGCCAGTGCTGAGGTTTACA 60.603 55.000 0.02 0.00 34.43 2.41
823 825 2.745100 CGACTGACGGACGGAGGA 60.745 66.667 0.00 0.00 38.46 3.71
881 1455 4.805768 TTTATGGGGTGGCGGCCG 62.806 66.667 24.05 24.05 0.00 6.13
882 1456 1.744320 GATTTTATGGGGTGGCGGCC 61.744 60.000 13.32 13.32 0.00 6.13
883 1457 1.739667 GATTTTATGGGGTGGCGGC 59.260 57.895 0.00 0.00 0.00 6.53
884 1458 0.396417 TGGATTTTATGGGGTGGCGG 60.396 55.000 0.00 0.00 0.00 6.13
1025 1599 2.125912 CGACCAGGACGAGGCAAG 60.126 66.667 5.25 0.00 0.00 4.01
1698 2312 2.813908 GGCGTGTAGTTGAGCGGG 60.814 66.667 0.00 0.00 0.00 6.13
1731 2345 1.449778 GAAGTAGGGGAGCGGCAAC 60.450 63.158 1.45 0.00 0.00 4.17
2088 2708 2.365635 TACAGCAGCCTCTCCCCC 60.366 66.667 0.00 0.00 0.00 5.40
2325 2954 4.081031 TGCTAATTTACACCGTGGATGGTA 60.081 41.667 3.03 0.00 41.38 3.25
2356 2985 4.106197 GAGAAAGATGTGGCACGTACTAG 58.894 47.826 13.23 0.00 0.00 2.57
2357 2986 3.119245 GGAGAAAGATGTGGCACGTACTA 60.119 47.826 13.23 0.00 0.00 1.82
2358 2987 2.353803 GGAGAAAGATGTGGCACGTACT 60.354 50.000 13.23 8.68 0.00 2.73
2404 3033 6.876155 TCATTGCCATATTTACATGCAAACT 58.124 32.000 0.00 0.00 30.95 2.66
2443 3072 2.311287 GGAGCTTCCCAGAATCCCA 58.689 57.895 0.00 0.00 0.00 4.37
2492 3121 0.250901 ACACGGCTGGAGATGCTTTT 60.251 50.000 0.00 0.00 0.00 2.27
2493 3122 0.613260 TACACGGCTGGAGATGCTTT 59.387 50.000 0.00 0.00 0.00 3.51
2494 3123 0.108138 GTACACGGCTGGAGATGCTT 60.108 55.000 0.00 0.00 0.00 3.91
2495 3124 1.517832 GTACACGGCTGGAGATGCT 59.482 57.895 0.00 0.00 0.00 3.79
2496 3125 1.878522 CGTACACGGCTGGAGATGC 60.879 63.158 0.00 0.00 35.37 3.91
2497 3126 0.172578 TTCGTACACGGCTGGAGATG 59.827 55.000 1.39 0.00 40.29 2.90
2498 3127 0.456221 CTTCGTACACGGCTGGAGAT 59.544 55.000 1.39 0.00 40.29 2.75
2499 3128 1.880894 CTTCGTACACGGCTGGAGA 59.119 57.895 1.39 0.00 40.29 3.71
2500 3129 1.805945 GCTTCGTACACGGCTGGAG 60.806 63.158 1.39 0.00 40.29 3.86
2501 3130 2.260434 GCTTCGTACACGGCTGGA 59.740 61.111 1.39 0.00 40.29 3.86
2502 3131 2.048597 TGCTTCGTACACGGCTGG 60.049 61.111 1.39 0.00 40.29 4.85
2503 3132 2.380410 GGTGCTTCGTACACGGCTG 61.380 63.158 1.39 0.00 38.98 4.85
2504 3133 2.048503 GGTGCTTCGTACACGGCT 60.049 61.111 1.39 0.00 38.98 5.52
2505 3134 3.475774 CGGTGCTTCGTACACGGC 61.476 66.667 1.39 0.00 38.98 5.68
2506 3135 1.153901 ATCGGTGCTTCGTACACGG 60.154 57.895 1.39 0.00 38.98 4.94
2507 3136 1.988409 CATCGGTGCTTCGTACACG 59.012 57.895 0.00 0.00 38.98 4.49
2518 3147 1.949133 CCGTATCGGTGCATCGGTG 60.949 63.158 21.08 0.38 42.73 4.94
2519 3148 2.415843 CCGTATCGGTGCATCGGT 59.584 61.111 21.08 16.43 42.73 4.69
2538 3167 2.166459 CCCATATCGCCGTATCAGTGAT 59.834 50.000 11.12 11.12 38.07 3.06
2539 3168 1.544246 CCCATATCGCCGTATCAGTGA 59.456 52.381 0.00 0.00 0.00 3.41
2540 3169 1.544246 TCCCATATCGCCGTATCAGTG 59.456 52.381 0.00 0.00 0.00 3.66
2543 3172 3.320826 CCATATCCCATATCGCCGTATCA 59.679 47.826 0.00 0.00 0.00 2.15
2544 3173 3.321111 ACCATATCCCATATCGCCGTATC 59.679 47.826 0.00 0.00 0.00 2.24
2545 3174 3.305720 ACCATATCCCATATCGCCGTAT 58.694 45.455 0.00 0.00 0.00 3.06
2566 3195 9.622004 TCGCCGTATTGATGTTTTTAAAAATTA 57.378 25.926 16.02 9.32 0.00 1.40
2639 3268 9.642312 CTCATTTCACACATTCTATTATGTTCG 57.358 33.333 0.00 0.00 36.64 3.95
2660 3289 4.870636 TGGGCCAGTATTTTGATCTCATT 58.129 39.130 0.00 0.00 0.00 2.57
2794 3423 4.083110 GCTGAGAGAAATAGCTGCACAAAA 60.083 41.667 1.02 0.00 34.70 2.44
3131 4059 8.520835 AAAAGAAAAGAAAGAAATGCCGATAC 57.479 30.769 0.00 0.00 0.00 2.24
3171 4100 4.096081 CGATACTCGTATCCCCAAGTATCC 59.904 50.000 13.07 0.84 43.81 2.59
3194 4124 1.967908 CGATACGAACGATACGGCTTC 59.032 52.381 0.14 0.00 34.93 3.86
3260 4198 4.530857 GGCACGGCTGGCTACGAT 62.531 66.667 0.00 0.00 39.91 3.73
3267 4205 2.876368 CTTCCTAAGGGCACGGCTGG 62.876 65.000 0.00 0.00 0.00 4.85
3268 4206 1.450312 CTTCCTAAGGGCACGGCTG 60.450 63.158 0.00 0.00 0.00 4.85
3269 4207 2.670148 CCTTCCTAAGGGCACGGCT 61.670 63.158 0.00 0.00 45.27 5.52
3270 4208 2.124695 CCTTCCTAAGGGCACGGC 60.125 66.667 0.00 0.00 45.27 5.68
3278 4216 1.265454 ACGTGGGAGGCCTTCCTAAG 61.265 60.000 31.09 22.35 44.46 2.18
3279 4217 1.229400 ACGTGGGAGGCCTTCCTAA 60.229 57.895 31.09 9.12 44.46 2.69
3280 4218 1.987855 CACGTGGGAGGCCTTCCTA 60.988 63.158 31.09 16.57 44.46 2.94
3282 4220 2.198304 AATCACGTGGGAGGCCTTCC 62.198 60.000 25.07 25.07 46.00 3.46
3283 4221 0.322546 AAATCACGTGGGAGGCCTTC 60.323 55.000 17.00 3.67 0.00 3.46
3284 4222 0.112412 AAAATCACGTGGGAGGCCTT 59.888 50.000 17.00 0.00 0.00 4.35
3285 4223 0.112412 AAAAATCACGTGGGAGGCCT 59.888 50.000 17.00 3.86 0.00 5.19
3286 4224 2.653557 AAAAATCACGTGGGAGGCC 58.346 52.632 17.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.