Multiple sequence alignment - TraesCS3A01G350500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G350500 chr3A 100.000 1671 0 0 876 2546 598989275 598987605 0.000000e+00 3086
1 TraesCS3A01G350500 chr3A 100.000 519 0 0 1 519 598990150 598989632 0.000000e+00 959
2 TraesCS3A01G350500 chr3D 91.304 1012 49 13 876 1875 456318606 456317622 0.000000e+00 1345
3 TraesCS3A01G350500 chr3D 88.868 521 21 12 1 519 456319193 456318708 7.790000e-170 606
4 TraesCS3A01G350500 chr3D 90.863 394 29 6 1875 2261 603950589 603950982 2.900000e-144 521
5 TraesCS3A01G350500 chr3D 95.833 264 11 0 2260 2523 17857963 17858226 6.510000e-116 427
6 TraesCS3A01G350500 chr3B 90.927 1025 41 22 876 1875 603374354 603375351 0.000000e+00 1330
7 TraesCS3A01G350500 chr3B 94.412 519 21 6 1 519 603373742 603374252 0.000000e+00 791
8 TraesCS3A01G350500 chr5A 93.878 392 20 3 1878 2265 503312654 503312263 2.820000e-164 588
9 TraesCS3A01G350500 chr5A 96.578 263 9 0 2261 2523 463746730 463746468 1.080000e-118 436
10 TraesCS3A01G350500 chr2A 93.367 392 23 2 1877 2265 70626252 70625861 6.110000e-161 577
11 TraesCS3A01G350500 chr2A 95.817 263 11 0 2261 2523 568585193 568584931 2.340000e-115 425
12 TraesCS3A01G350500 chr1A 91.133 406 29 7 1861 2261 339909712 339909309 6.190000e-151 544
13 TraesCS3A01G350500 chr1A 96.212 264 9 1 2261 2524 564453370 564453108 5.030000e-117 431
14 TraesCS3A01G350500 chr7D 90.428 397 33 4 1870 2261 529345742 529346138 3.750000e-143 518
15 TraesCS3A01G350500 chr7D 90.561 392 32 4 1875 2261 52453655 52454046 4.860000e-142 514
16 TraesCS3A01G350500 chrUn 90.331 393 34 4 1877 2265 159837149 159836757 1.750000e-141 512
17 TraesCS3A01G350500 chrUn 90.076 393 35 4 1877 2265 159906297 159905905 8.130000e-140 507
18 TraesCS3A01G350500 chr5D 90.306 392 33 4 1875 2261 350376833 350377224 2.260000e-140 508
19 TraesCS3A01G350500 chr5D 95.817 263 11 0 2261 2523 119267843 119267581 2.340000e-115 425
20 TraesCS3A01G350500 chr6D 97.358 265 7 0 2260 2524 434447426 434447162 3.860000e-123 451
21 TraesCS3A01G350500 chr4A 95.817 263 11 0 2261 2523 666841737 666841475 2.340000e-115 425
22 TraesCS3A01G350500 chr2D 95.817 263 11 0 2261 2523 87774956 87775218 2.340000e-115 425
23 TraesCS3A01G350500 chr4B 94.485 272 14 1 2261 2531 156531138 156530867 3.920000e-113 418


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G350500 chr3A 598987605 598990150 2545 True 2022.5 3086 100.0000 1 2546 2 chr3A.!!$R1 2545
1 TraesCS3A01G350500 chr3D 456317622 456319193 1571 True 975.5 1345 90.0860 1 1875 2 chr3D.!!$R1 1874
2 TraesCS3A01G350500 chr3B 603373742 603375351 1609 False 1060.5 1330 92.6695 1 1875 2 chr3B.!!$F1 1874

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 222 0.736053 GTTCCGTGGTTCTGTGCAAA 59.264 50.0 0.0 0.0 0.0 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 2214 0.029567 GTCGCTACTCACTCCGATGG 59.97 60.0 0.0 0.0 31.96 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.038557 TCCACTGAACCTTGCTAACTCC 59.961 50.000 0.00 0.00 0.00 3.85
42 43 2.285220 CGATGCCATACGAACTTTCTGG 59.715 50.000 0.00 0.00 0.00 3.86
43 44 3.531538 GATGCCATACGAACTTTCTGGA 58.468 45.455 0.00 0.00 0.00 3.86
86 87 2.362077 GCATGAAAACAGAACACCCAGT 59.638 45.455 0.00 0.00 0.00 4.00
99 100 3.287222 ACACCCAGTTTTATGCGCATAT 58.713 40.909 29.41 13.00 0.00 1.78
104 105 8.044309 ACACCCAGTTTTATGCGCATATATATA 58.956 33.333 29.41 12.61 0.00 0.86
105 106 8.335356 CACCCAGTTTTATGCGCATATATATAC 58.665 37.037 29.41 18.91 0.00 1.47
106 107 8.044309 ACCCAGTTTTATGCGCATATATATACA 58.956 33.333 29.41 11.11 0.00 2.29
107 108 9.056005 CCCAGTTTTATGCGCATATATATACAT 57.944 33.333 29.41 4.37 0.00 2.29
130 131 7.332678 ACATACAGATAACCTTACGGTGAAAAC 59.667 37.037 0.00 0.00 44.73 2.43
190 191 2.858745 TGGTTCCTTGCTTCAACTACC 58.141 47.619 0.00 0.00 0.00 3.18
196 197 1.195448 CTTGCTTCAACTACCAGCACG 59.805 52.381 0.00 0.00 43.24 5.34
221 222 0.736053 GTTCCGTGGTTCTGTGCAAA 59.264 50.000 0.00 0.00 0.00 3.68
242 243 1.522676 CAGCATCGTAATGGCGTACTG 59.477 52.381 0.00 0.00 33.19 2.74
422 424 1.815003 CTCCATGAACGCCATCGCA 60.815 57.895 0.00 0.00 39.84 5.10
458 460 2.867975 CACGTTGAATTACCCGGGATAC 59.132 50.000 32.02 13.81 0.00 2.24
1068 1078 2.087009 GGACGACGGCAACTTCTCG 61.087 63.158 1.63 0.00 31.42 4.04
1197 1207 2.956964 GCGACGCTTCCCATCTCG 60.957 66.667 13.73 0.00 0.00 4.04
1200 1210 0.736325 CGACGCTTCCCATCTCGTTT 60.736 55.000 0.00 0.00 35.12 3.60
1556 1566 1.142748 CTGTCTGATCGACCCTGCC 59.857 63.158 12.89 0.00 42.13 4.85
1557 1567 1.607801 CTGTCTGATCGACCCTGCCA 61.608 60.000 12.89 0.00 42.13 4.92
1558 1568 1.153549 GTCTGATCGACCCTGCCAC 60.154 63.158 6.47 0.00 36.62 5.01
1559 1569 1.609210 TCTGATCGACCCTGCCACA 60.609 57.895 0.00 0.00 0.00 4.17
1560 1570 1.153489 CTGATCGACCCTGCCACAG 60.153 63.158 0.00 0.00 0.00 3.66
1561 1571 1.892819 CTGATCGACCCTGCCACAGT 61.893 60.000 0.00 0.00 0.00 3.55
1565 1575 4.269523 GACCCTGCCACAGTGCCA 62.270 66.667 0.00 0.00 0.00 4.92
1591 1601 1.205064 CAGCAAGTTCGGAACTGCG 59.795 57.895 23.05 17.63 41.91 5.18
1625 1635 1.078848 GCGACTGACATTGGAGCCT 60.079 57.895 0.00 0.00 0.00 4.58
1626 1636 1.086634 GCGACTGACATTGGAGCCTC 61.087 60.000 0.00 0.00 0.00 4.70
1627 1637 0.803768 CGACTGACATTGGAGCCTCG 60.804 60.000 0.00 0.00 0.00 4.63
1645 1658 1.815003 GCCGCCAATTTCCATTGCC 60.815 57.895 0.00 0.00 38.88 4.52
1647 1660 1.616091 CCGCCAATTTCCATTGCCCT 61.616 55.000 0.00 0.00 38.88 5.19
1664 1688 1.672030 CTGACCGATGGCTGTTGCA 60.672 57.895 0.00 0.00 41.91 4.08
1665 1689 1.915614 CTGACCGATGGCTGTTGCAC 61.916 60.000 0.00 0.00 41.91 4.57
1668 1694 2.174107 CGATGGCTGTTGCACGTG 59.826 61.111 12.28 12.28 41.91 4.49
1698 1724 0.896923 TTCAGGCATGGTTGATTGGC 59.103 50.000 0.00 0.00 38.60 4.52
1720 1746 1.127951 GCGACGACGGATCATTTTTGT 59.872 47.619 9.67 0.00 40.15 2.83
1764 1792 8.050778 TGAACGGATCATTTTTGCTTAGTTAT 57.949 30.769 0.00 0.00 31.50 1.89
1768 1796 9.353999 ACGGATCATTTTTGCTTAGTTATTTTC 57.646 29.630 0.00 0.00 0.00 2.29
1770 1798 9.875691 GGATCATTTTTGCTTAGTTATTTTCCT 57.124 29.630 0.00 0.00 0.00 3.36
1773 1801 9.487790 TCATTTTTGCTTAGTTATTTTCCTTGG 57.512 29.630 0.00 0.00 0.00 3.61
1774 1802 9.271828 CATTTTTGCTTAGTTATTTTCCTTGGT 57.728 29.630 0.00 0.00 0.00 3.67
1775 1803 9.845740 ATTTTTGCTTAGTTATTTTCCTTGGTT 57.154 25.926 0.00 0.00 0.00 3.67
1832 1860 8.938801 TTGATATTGCCCACATCAATAATAGT 57.061 30.769 0.00 0.00 39.13 2.12
1848 1878 6.787085 ATAATAGTAAAACGAGCTGCATCC 57.213 37.500 1.02 0.00 0.00 3.51
1875 1905 3.297134 ACCCCGTTTGCATCATATCTT 57.703 42.857 0.00 0.00 0.00 2.40
1876 1906 3.631250 ACCCCGTTTGCATCATATCTTT 58.369 40.909 0.00 0.00 0.00 2.52
1877 1907 4.023291 ACCCCGTTTGCATCATATCTTTT 58.977 39.130 0.00 0.00 0.00 2.27
1878 1908 4.466015 ACCCCGTTTGCATCATATCTTTTT 59.534 37.500 0.00 0.00 0.00 1.94
1900 1930 3.658757 TTTTGAAAAGAGATTGCCCCG 57.341 42.857 0.00 0.00 0.00 5.73
1901 1931 1.544724 TTGAAAAGAGATTGCCCCGG 58.455 50.000 0.00 0.00 0.00 5.73
1902 1932 0.965363 TGAAAAGAGATTGCCCCGGC 60.965 55.000 0.00 0.00 42.35 6.13
1903 1933 1.667154 GAAAAGAGATTGCCCCGGCC 61.667 60.000 2.62 0.00 41.09 6.13
1904 1934 2.155197 AAAAGAGATTGCCCCGGCCT 62.155 55.000 0.00 0.00 41.09 5.19
1905 1935 2.558380 AAAGAGATTGCCCCGGCCTC 62.558 60.000 0.00 2.91 41.09 4.70
1906 1936 3.483869 GAGATTGCCCCGGCCTCT 61.484 66.667 0.00 5.47 41.09 3.69
1907 1937 3.764160 GAGATTGCCCCGGCCTCTG 62.764 68.421 11.46 0.00 41.09 3.35
1913 1943 4.113815 CCCCGGCCTCTGCATCAA 62.114 66.667 0.00 0.00 40.13 2.57
1914 1944 2.045045 CCCGGCCTCTGCATCAAA 60.045 61.111 0.00 0.00 40.13 2.69
1915 1945 1.678635 CCCGGCCTCTGCATCAAAA 60.679 57.895 0.00 0.00 40.13 2.44
1916 1946 1.250154 CCCGGCCTCTGCATCAAAAA 61.250 55.000 0.00 0.00 40.13 1.94
1917 1947 0.819582 CCGGCCTCTGCATCAAAAAT 59.180 50.000 0.00 0.00 40.13 1.82
1918 1948 2.023673 CCGGCCTCTGCATCAAAAATA 58.976 47.619 0.00 0.00 40.13 1.40
1919 1949 2.624838 CCGGCCTCTGCATCAAAAATAT 59.375 45.455 0.00 0.00 40.13 1.28
1920 1950 3.551454 CCGGCCTCTGCATCAAAAATATG 60.551 47.826 0.00 0.00 40.13 1.78
1930 1960 4.869215 CATCAAAAATATGCATACGGCCA 58.131 39.130 8.99 0.00 43.89 5.36
1931 1961 5.472148 CATCAAAAATATGCATACGGCCAT 58.528 37.500 8.99 0.00 43.89 4.40
1932 1962 5.119931 TCAAAAATATGCATACGGCCATC 57.880 39.130 8.99 0.00 43.89 3.51
1933 1963 4.826733 TCAAAAATATGCATACGGCCATCT 59.173 37.500 8.99 0.00 43.89 2.90
1934 1964 5.301551 TCAAAAATATGCATACGGCCATCTT 59.698 36.000 8.99 0.00 43.89 2.40
1935 1965 6.488344 TCAAAAATATGCATACGGCCATCTTA 59.512 34.615 8.99 0.00 43.89 2.10
1936 1966 7.176515 TCAAAAATATGCATACGGCCATCTTAT 59.823 33.333 8.99 0.00 43.89 1.73
1937 1967 7.466746 AAAATATGCATACGGCCATCTTATT 57.533 32.000 8.99 0.00 43.89 1.40
1938 1968 8.574251 AAAATATGCATACGGCCATCTTATTA 57.426 30.769 8.99 0.00 43.89 0.98
1939 1969 8.574251 AAATATGCATACGGCCATCTTATTAA 57.426 30.769 8.99 0.00 43.89 1.40
1940 1970 5.880054 ATGCATACGGCCATCTTATTAAC 57.120 39.130 2.24 0.00 43.89 2.01
1941 1971 4.069304 TGCATACGGCCATCTTATTAACC 58.931 43.478 2.24 0.00 43.89 2.85
1942 1972 4.069304 GCATACGGCCATCTTATTAACCA 58.931 43.478 2.24 0.00 36.11 3.67
1943 1973 4.517453 GCATACGGCCATCTTATTAACCAA 59.483 41.667 2.24 0.00 36.11 3.67
1944 1974 5.009210 GCATACGGCCATCTTATTAACCAAA 59.991 40.000 2.24 0.00 36.11 3.28
1945 1975 6.294508 GCATACGGCCATCTTATTAACCAAAT 60.295 38.462 2.24 0.00 36.11 2.32
1946 1976 7.094549 GCATACGGCCATCTTATTAACCAAATA 60.095 37.037 2.24 0.00 36.11 1.40
1947 1977 8.788806 CATACGGCCATCTTATTAACCAAATAA 58.211 33.333 2.24 0.00 37.64 1.40
1948 1978 7.648039 ACGGCCATCTTATTAACCAAATAAA 57.352 32.000 2.24 0.00 39.10 1.40
1949 1979 8.068892 ACGGCCATCTTATTAACCAAATAAAA 57.931 30.769 2.24 0.00 39.10 1.52
1950 1980 8.194769 ACGGCCATCTTATTAACCAAATAAAAG 58.805 33.333 2.24 0.00 39.10 2.27
1951 1981 8.410141 CGGCCATCTTATTAACCAAATAAAAGA 58.590 33.333 2.24 0.00 39.10 2.52
1963 1993 8.887036 AACCAAATAAAAGATCCAACAAGTTC 57.113 30.769 0.00 0.00 0.00 3.01
1964 1994 7.441836 ACCAAATAAAAGATCCAACAAGTTCC 58.558 34.615 0.00 0.00 0.00 3.62
1965 1995 7.070571 ACCAAATAAAAGATCCAACAAGTTCCA 59.929 33.333 0.00 0.00 0.00 3.53
1966 1996 7.930865 CCAAATAAAAGATCCAACAAGTTCCAA 59.069 33.333 0.00 0.00 0.00 3.53
1967 1997 9.323985 CAAATAAAAGATCCAACAAGTTCCAAA 57.676 29.630 0.00 0.00 0.00 3.28
1968 1998 9.546428 AAATAAAAGATCCAACAAGTTCCAAAG 57.454 29.630 0.00 0.00 0.00 2.77
1969 1999 6.544928 AAAAGATCCAACAAGTTCCAAAGT 57.455 33.333 0.00 0.00 0.00 2.66
1970 2000 5.774498 AAGATCCAACAAGTTCCAAAGTC 57.226 39.130 0.00 0.00 0.00 3.01
1971 2001 5.053978 AGATCCAACAAGTTCCAAAGTCT 57.946 39.130 0.00 0.00 0.00 3.24
1972 2002 5.066593 AGATCCAACAAGTTCCAAAGTCTC 58.933 41.667 0.00 0.00 0.00 3.36
1973 2003 3.551846 TCCAACAAGTTCCAAAGTCTCC 58.448 45.455 0.00 0.00 0.00 3.71
1974 2004 3.053991 TCCAACAAGTTCCAAAGTCTCCA 60.054 43.478 0.00 0.00 0.00 3.86
1975 2005 3.699038 CCAACAAGTTCCAAAGTCTCCAA 59.301 43.478 0.00 0.00 0.00 3.53
1976 2006 4.440112 CCAACAAGTTCCAAAGTCTCCAAC 60.440 45.833 0.00 0.00 0.00 3.77
1977 2007 4.236527 ACAAGTTCCAAAGTCTCCAACT 57.763 40.909 0.00 0.00 41.10 3.16
1978 2008 3.947834 ACAAGTTCCAAAGTCTCCAACTG 59.052 43.478 0.00 0.00 38.58 3.16
1979 2009 3.214696 AGTTCCAAAGTCTCCAACTGG 57.785 47.619 0.00 0.00 38.58 4.00
1980 2010 2.777692 AGTTCCAAAGTCTCCAACTGGA 59.222 45.455 0.00 0.00 43.08 3.86
1981 2011 3.202151 AGTTCCAAAGTCTCCAACTGGAA 59.798 43.478 0.00 0.00 44.91 3.53
1982 2012 3.943671 TCCAAAGTCTCCAACTGGAAA 57.056 42.857 0.00 0.00 44.91 3.13
1983 2013 4.243793 TCCAAAGTCTCCAACTGGAAAA 57.756 40.909 0.00 0.00 44.91 2.29
1984 2014 4.605183 TCCAAAGTCTCCAACTGGAAAAA 58.395 39.130 0.00 0.00 44.91 1.94
1985 2015 4.401202 TCCAAAGTCTCCAACTGGAAAAAC 59.599 41.667 0.00 0.00 44.91 2.43
1986 2016 4.402474 CCAAAGTCTCCAACTGGAAAAACT 59.598 41.667 0.00 1.71 44.91 2.66
1987 2017 5.343249 CAAAGTCTCCAACTGGAAAAACTG 58.657 41.667 0.00 0.00 44.91 3.16
1988 2018 4.503714 AGTCTCCAACTGGAAAAACTGA 57.496 40.909 0.00 0.00 44.91 3.41
1989 2019 4.855340 AGTCTCCAACTGGAAAAACTGAA 58.145 39.130 0.00 0.00 44.91 3.02
1990 2020 5.261216 AGTCTCCAACTGGAAAAACTGAAA 58.739 37.500 0.00 0.00 44.91 2.69
1991 2021 5.714806 AGTCTCCAACTGGAAAAACTGAAAA 59.285 36.000 0.00 0.00 44.91 2.29
1992 2022 6.036470 GTCTCCAACTGGAAAAACTGAAAAG 58.964 40.000 0.00 0.00 44.91 2.27
1993 2023 5.949354 TCTCCAACTGGAAAAACTGAAAAGA 59.051 36.000 0.00 0.00 44.91 2.52
1994 2024 6.607198 TCTCCAACTGGAAAAACTGAAAAGAT 59.393 34.615 0.00 0.00 44.91 2.40
1995 2025 7.777910 TCTCCAACTGGAAAAACTGAAAAGATA 59.222 33.333 0.00 0.00 44.91 1.98
1996 2026 7.940850 TCCAACTGGAAAAACTGAAAAGATAG 58.059 34.615 0.00 0.00 42.18 2.08
1997 2027 6.642540 CCAACTGGAAAAACTGAAAAGATAGC 59.357 38.462 0.00 0.00 37.39 2.97
1998 2028 7.428826 CAACTGGAAAAACTGAAAAGATAGCT 58.571 34.615 0.00 0.00 0.00 3.32
1999 2029 7.208225 ACTGGAAAAACTGAAAAGATAGCTC 57.792 36.000 0.00 0.00 0.00 4.09
2000 2030 6.772716 ACTGGAAAAACTGAAAAGATAGCTCA 59.227 34.615 0.00 0.00 0.00 4.26
2001 2031 6.970484 TGGAAAAACTGAAAAGATAGCTCAC 58.030 36.000 0.00 0.00 0.00 3.51
2002 2032 6.545666 TGGAAAAACTGAAAAGATAGCTCACA 59.454 34.615 0.00 0.00 0.00 3.58
2003 2033 6.858478 GGAAAAACTGAAAAGATAGCTCACAC 59.142 38.462 0.00 0.00 0.00 3.82
2004 2034 6.942532 AAAACTGAAAAGATAGCTCACACA 57.057 33.333 0.00 0.00 0.00 3.72
2005 2035 6.551385 AAACTGAAAAGATAGCTCACACAG 57.449 37.500 0.00 0.00 0.00 3.66
2006 2036 5.474578 ACTGAAAAGATAGCTCACACAGA 57.525 39.130 0.00 0.00 0.00 3.41
2017 2047 1.542915 CTCACACAGAGCCAAAATGGG 59.457 52.381 0.00 0.00 38.19 4.00
2030 2060 4.780815 CCAAAATGGGCTAGATACACAGA 58.219 43.478 0.00 0.00 32.67 3.41
2031 2061 4.576463 CCAAAATGGGCTAGATACACAGAC 59.424 45.833 0.00 0.00 32.67 3.51
2032 2062 5.431765 CAAAATGGGCTAGATACACAGACT 58.568 41.667 0.00 0.00 0.00 3.24
2033 2063 6.408092 CCAAAATGGGCTAGATACACAGACTA 60.408 42.308 0.00 0.00 32.67 2.59
2034 2064 6.412362 AAATGGGCTAGATACACAGACTAG 57.588 41.667 0.00 0.00 37.32 2.57
2041 2071 6.701145 CTAGATACACAGACTAGCCAAGAA 57.299 41.667 0.00 0.00 0.00 2.52
2042 2072 7.101652 CTAGATACACAGACTAGCCAAGAAA 57.898 40.000 0.00 0.00 0.00 2.52
2043 2073 6.360370 AGATACACAGACTAGCCAAGAAAA 57.640 37.500 0.00 0.00 0.00 2.29
2044 2074 6.402222 AGATACACAGACTAGCCAAGAAAAG 58.598 40.000 0.00 0.00 0.00 2.27
2045 2075 4.689612 ACACAGACTAGCCAAGAAAAGA 57.310 40.909 0.00 0.00 0.00 2.52
2046 2076 5.234466 ACACAGACTAGCCAAGAAAAGAT 57.766 39.130 0.00 0.00 0.00 2.40
2047 2077 4.999950 ACACAGACTAGCCAAGAAAAGATG 59.000 41.667 0.00 0.00 0.00 2.90
2048 2078 4.999950 CACAGACTAGCCAAGAAAAGATGT 59.000 41.667 0.00 0.00 0.00 3.06
2049 2079 5.121454 CACAGACTAGCCAAGAAAAGATGTC 59.879 44.000 0.00 0.00 0.00 3.06
2050 2080 5.221722 ACAGACTAGCCAAGAAAAGATGTCA 60.222 40.000 0.00 0.00 0.00 3.58
2051 2081 5.121454 CAGACTAGCCAAGAAAAGATGTCAC 59.879 44.000 0.00 0.00 0.00 3.67
2052 2082 4.973168 ACTAGCCAAGAAAAGATGTCACA 58.027 39.130 0.00 0.00 0.00 3.58
2053 2083 5.376625 ACTAGCCAAGAAAAGATGTCACAA 58.623 37.500 0.00 0.00 0.00 3.33
2054 2084 4.574599 AGCCAAGAAAAGATGTCACAAC 57.425 40.909 0.00 0.00 0.00 3.32
2055 2085 3.319122 AGCCAAGAAAAGATGTCACAACC 59.681 43.478 0.00 0.00 0.00 3.77
2056 2086 3.853307 GCCAAGAAAAGATGTCACAACCG 60.853 47.826 0.00 0.00 0.00 4.44
2057 2087 3.304659 CCAAGAAAAGATGTCACAACCGG 60.305 47.826 0.00 0.00 0.00 5.28
2058 2088 1.880027 AGAAAAGATGTCACAACCGGC 59.120 47.619 0.00 0.00 0.00 6.13
2059 2089 1.880027 GAAAAGATGTCACAACCGGCT 59.120 47.619 0.00 0.00 0.00 5.52
2060 2090 1.238439 AAAGATGTCACAACCGGCTG 58.762 50.000 0.00 0.62 0.00 4.85
2061 2091 0.606401 AAGATGTCACAACCGGCTGG 60.606 55.000 11.02 11.02 42.84 4.85
2062 2092 2.672996 ATGTCACAACCGGCTGGC 60.673 61.111 12.89 0.61 39.70 4.85
2063 2093 3.196207 ATGTCACAACCGGCTGGCT 62.196 57.895 12.89 0.00 39.70 4.75
2064 2094 1.836999 ATGTCACAACCGGCTGGCTA 61.837 55.000 12.89 0.00 39.70 3.93
2065 2095 1.302192 GTCACAACCGGCTGGCTAA 60.302 57.895 12.89 0.00 39.70 3.09
2066 2096 0.887387 GTCACAACCGGCTGGCTAAA 60.887 55.000 12.89 0.00 39.70 1.85
2067 2097 0.605319 TCACAACCGGCTGGCTAAAG 60.605 55.000 12.89 0.00 39.70 1.85
2068 2098 0.605319 CACAACCGGCTGGCTAAAGA 60.605 55.000 12.89 0.00 39.70 2.52
2069 2099 0.328258 ACAACCGGCTGGCTAAAGAT 59.672 50.000 12.89 0.00 39.70 2.40
2070 2100 1.557832 ACAACCGGCTGGCTAAAGATA 59.442 47.619 12.89 0.00 39.70 1.98
2071 2101 2.213499 CAACCGGCTGGCTAAAGATAG 58.787 52.381 12.89 0.00 39.70 2.08
2072 2102 1.789523 ACCGGCTGGCTAAAGATAGA 58.210 50.000 12.89 0.00 39.70 1.98
2073 2103 2.330216 ACCGGCTGGCTAAAGATAGAT 58.670 47.619 12.89 0.00 39.70 1.98
2074 2104 3.507411 ACCGGCTGGCTAAAGATAGATA 58.493 45.455 12.89 0.00 39.70 1.98
2075 2105 3.511934 ACCGGCTGGCTAAAGATAGATAG 59.488 47.826 12.89 0.00 39.70 2.08
2076 2106 3.118956 CCGGCTGGCTAAAGATAGATAGG 60.119 52.174 0.00 0.00 0.00 2.57
2077 2107 3.511934 CGGCTGGCTAAAGATAGATAGGT 59.488 47.826 0.00 0.00 0.00 3.08
2078 2108 4.705507 CGGCTGGCTAAAGATAGATAGGTA 59.294 45.833 0.00 0.00 0.00 3.08
2079 2109 5.185249 CGGCTGGCTAAAGATAGATAGGTAA 59.815 44.000 0.00 0.00 0.00 2.85
2080 2110 6.295123 CGGCTGGCTAAAGATAGATAGGTAAA 60.295 42.308 0.00 0.00 0.00 2.01
2081 2111 6.874664 GGCTGGCTAAAGATAGATAGGTAAAC 59.125 42.308 0.00 0.00 0.00 2.01
2082 2112 7.256368 GGCTGGCTAAAGATAGATAGGTAAACT 60.256 40.741 0.00 0.00 0.00 2.66
2083 2113 8.804204 GCTGGCTAAAGATAGATAGGTAAACTA 58.196 37.037 0.00 0.00 35.80 2.24
2105 2135 9.726438 AACTAATTGCCTATCCTATTACATGAC 57.274 33.333 0.00 0.00 0.00 3.06
2106 2136 8.035394 ACTAATTGCCTATCCTATTACATGACG 58.965 37.037 0.00 0.00 0.00 4.35
2107 2137 4.188247 TGCCTATCCTATTACATGACGC 57.812 45.455 0.00 0.00 0.00 5.19
2108 2138 3.056107 TGCCTATCCTATTACATGACGCC 60.056 47.826 0.00 0.00 0.00 5.68
2109 2139 3.056107 GCCTATCCTATTACATGACGCCA 60.056 47.826 0.00 0.00 0.00 5.69
2110 2140 4.383118 GCCTATCCTATTACATGACGCCAT 60.383 45.833 0.00 0.00 0.00 4.40
2111 2141 5.352284 CCTATCCTATTACATGACGCCATC 58.648 45.833 0.00 0.00 0.00 3.51
2112 2142 3.678056 TCCTATTACATGACGCCATCC 57.322 47.619 0.00 0.00 0.00 3.51
2113 2143 2.969262 TCCTATTACATGACGCCATCCA 59.031 45.455 0.00 0.00 0.00 3.41
2114 2144 3.389656 TCCTATTACATGACGCCATCCAA 59.610 43.478 0.00 0.00 0.00 3.53
2115 2145 4.133820 CCTATTACATGACGCCATCCAAA 58.866 43.478 0.00 0.00 0.00 3.28
2116 2146 4.024048 CCTATTACATGACGCCATCCAAAC 60.024 45.833 0.00 0.00 0.00 2.93
2117 2147 1.745232 TACATGACGCCATCCAAACC 58.255 50.000 0.00 0.00 0.00 3.27
2118 2148 1.305219 ACATGACGCCATCCAAACCG 61.305 55.000 0.00 0.00 0.00 4.44
2119 2149 1.748879 ATGACGCCATCCAAACCGG 60.749 57.895 0.00 0.00 0.00 5.28
2120 2150 2.359478 GACGCCATCCAAACCGGT 60.359 61.111 0.00 0.00 35.57 5.28
2121 2151 1.969589 GACGCCATCCAAACCGGTT 60.970 57.895 15.86 15.86 35.57 4.44
2122 2152 2.195123 GACGCCATCCAAACCGGTTG 62.195 60.000 23.08 14.70 36.94 3.77
2123 2153 1.969064 CGCCATCCAAACCGGTTGA 60.969 57.895 23.08 15.50 39.87 3.18
2124 2154 1.312371 CGCCATCCAAACCGGTTGAT 61.312 55.000 23.08 17.21 39.87 2.57
2125 2155 0.173255 GCCATCCAAACCGGTTGATG 59.827 55.000 28.41 28.41 39.87 3.07
2126 2156 1.832883 CCATCCAAACCGGTTGATGA 58.167 50.000 33.32 24.63 39.87 2.92
2127 2157 2.378038 CCATCCAAACCGGTTGATGAT 58.622 47.619 33.32 25.45 39.87 2.45
2128 2158 3.550820 CCATCCAAACCGGTTGATGATA 58.449 45.455 33.32 17.82 39.87 2.15
2129 2159 4.144297 CCATCCAAACCGGTTGATGATAT 58.856 43.478 33.32 18.90 39.87 1.63
2130 2160 4.216257 CCATCCAAACCGGTTGATGATATC 59.784 45.833 33.32 0.00 39.87 1.63
2131 2161 3.815809 TCCAAACCGGTTGATGATATCC 58.184 45.455 23.08 0.00 39.87 2.59
2132 2162 3.458118 TCCAAACCGGTTGATGATATCCT 59.542 43.478 23.08 0.00 39.87 3.24
2133 2163 3.565482 CCAAACCGGTTGATGATATCCTG 59.435 47.826 23.08 10.93 39.87 3.86
2134 2164 4.450976 CAAACCGGTTGATGATATCCTGA 58.549 43.478 23.08 0.00 39.87 3.86
2135 2165 4.342862 AACCGGTTGATGATATCCTGAG 57.657 45.455 21.56 0.00 0.00 3.35
2136 2166 2.037772 ACCGGTTGATGATATCCTGAGC 59.962 50.000 0.00 0.00 0.00 4.26
2137 2167 2.301296 CCGGTTGATGATATCCTGAGCT 59.699 50.000 0.00 0.00 0.00 4.09
2138 2168 3.511540 CCGGTTGATGATATCCTGAGCTA 59.488 47.826 0.00 0.00 0.00 3.32
2139 2169 4.489810 CGGTTGATGATATCCTGAGCTAC 58.510 47.826 0.00 0.00 0.00 3.58
2140 2170 4.619394 CGGTTGATGATATCCTGAGCTACC 60.619 50.000 0.00 0.75 0.00 3.18
2141 2171 4.284490 GGTTGATGATATCCTGAGCTACCA 59.716 45.833 0.00 0.00 0.00 3.25
2142 2172 5.046014 GGTTGATGATATCCTGAGCTACCAT 60.046 44.000 0.00 0.00 0.00 3.55
2143 2173 5.929058 TGATGATATCCTGAGCTACCATC 57.071 43.478 0.00 0.00 0.00 3.51
2144 2174 5.587861 TGATGATATCCTGAGCTACCATCT 58.412 41.667 0.00 0.00 32.70 2.90
2145 2175 5.655974 TGATGATATCCTGAGCTACCATCTC 59.344 44.000 0.00 0.00 32.70 2.75
2146 2176 4.348486 TGATATCCTGAGCTACCATCTCC 58.652 47.826 0.00 0.00 0.00 3.71
2147 2177 2.022718 ATCCTGAGCTACCATCTCCC 57.977 55.000 0.00 0.00 0.00 4.30
2148 2178 0.636647 TCCTGAGCTACCATCTCCCA 59.363 55.000 0.00 0.00 0.00 4.37
2149 2179 1.008327 TCCTGAGCTACCATCTCCCAA 59.992 52.381 0.00 0.00 0.00 4.12
2150 2180 1.139853 CCTGAGCTACCATCTCCCAAC 59.860 57.143 0.00 0.00 0.00 3.77
2151 2181 0.824109 TGAGCTACCATCTCCCAACG 59.176 55.000 0.00 0.00 0.00 4.10
2152 2182 0.105039 GAGCTACCATCTCCCAACGG 59.895 60.000 0.00 0.00 0.00 4.44
2153 2183 0.325296 AGCTACCATCTCCCAACGGA 60.325 55.000 0.00 0.00 36.45 4.69
2154 2184 0.179081 GCTACCATCTCCCAACGGAC 60.179 60.000 0.00 0.00 33.32 4.79
2155 2185 1.191535 CTACCATCTCCCAACGGACA 58.808 55.000 0.00 0.00 33.32 4.02
2156 2186 1.137086 CTACCATCTCCCAACGGACAG 59.863 57.143 0.00 0.00 33.32 3.51
2157 2187 0.544357 ACCATCTCCCAACGGACAGA 60.544 55.000 0.00 0.00 33.32 3.41
2158 2188 0.833287 CCATCTCCCAACGGACAGAT 59.167 55.000 0.00 0.00 33.32 2.90
2159 2189 1.202580 CCATCTCCCAACGGACAGATC 60.203 57.143 0.00 0.00 33.32 2.75
2160 2190 1.123928 ATCTCCCAACGGACAGATCC 58.876 55.000 0.00 0.00 42.28 3.36
2161 2191 0.252057 TCTCCCAACGGACAGATCCA 60.252 55.000 0.00 0.00 46.67 3.41
2162 2192 0.176680 CTCCCAACGGACAGATCCAG 59.823 60.000 0.00 0.00 46.67 3.86
2163 2193 0.544357 TCCCAACGGACAGATCCAGT 60.544 55.000 0.00 0.00 46.67 4.00
2164 2194 1.191535 CCCAACGGACAGATCCAGTA 58.808 55.000 0.00 0.00 46.67 2.74
2165 2195 1.553248 CCCAACGGACAGATCCAGTAA 59.447 52.381 0.00 0.00 46.67 2.24
2166 2196 2.618053 CCAACGGACAGATCCAGTAAC 58.382 52.381 0.00 0.00 46.67 2.50
2167 2197 2.618053 CAACGGACAGATCCAGTAACC 58.382 52.381 0.00 0.00 46.67 2.85
2168 2198 1.933021 ACGGACAGATCCAGTAACCA 58.067 50.000 0.00 0.00 46.67 3.67
2169 2199 2.253610 ACGGACAGATCCAGTAACCAA 58.746 47.619 0.00 0.00 46.67 3.67
2170 2200 2.635915 ACGGACAGATCCAGTAACCAAA 59.364 45.455 0.00 0.00 46.67 3.28
2171 2201 3.263425 ACGGACAGATCCAGTAACCAAAT 59.737 43.478 0.00 0.00 46.67 2.32
2172 2202 3.623060 CGGACAGATCCAGTAACCAAATG 59.377 47.826 0.00 0.00 46.67 2.32
2173 2203 3.378427 GGACAGATCCAGTAACCAAATGC 59.622 47.826 0.00 0.00 45.47 3.56
2174 2204 4.265073 GACAGATCCAGTAACCAAATGCT 58.735 43.478 0.00 0.00 0.00 3.79
2175 2205 4.265073 ACAGATCCAGTAACCAAATGCTC 58.735 43.478 0.00 0.00 0.00 4.26
2176 2206 4.018960 ACAGATCCAGTAACCAAATGCTCT 60.019 41.667 0.00 0.00 0.00 4.09
2177 2207 4.574013 CAGATCCAGTAACCAAATGCTCTC 59.426 45.833 0.00 0.00 0.00 3.20
2178 2208 4.472833 AGATCCAGTAACCAAATGCTCTCT 59.527 41.667 0.00 0.00 0.00 3.10
2179 2209 3.942829 TCCAGTAACCAAATGCTCTCTG 58.057 45.455 0.00 0.00 0.00 3.35
2180 2210 3.012518 CCAGTAACCAAATGCTCTCTGG 58.987 50.000 0.00 0.00 35.90 3.86
2181 2211 2.421424 CAGTAACCAAATGCTCTCTGGC 59.579 50.000 0.00 0.00 33.19 4.85
2182 2212 1.745653 GTAACCAAATGCTCTCTGGCC 59.254 52.381 0.00 0.00 33.19 5.36
2183 2213 0.407139 AACCAAATGCTCTCTGGCCT 59.593 50.000 3.32 0.00 33.19 5.19
2184 2214 0.034670 ACCAAATGCTCTCTGGCCTC 60.035 55.000 3.32 0.00 33.19 4.70
2185 2215 0.750911 CCAAATGCTCTCTGGCCTCC 60.751 60.000 3.32 0.00 0.00 4.30
2186 2216 0.034767 CAAATGCTCTCTGGCCTCCA 60.035 55.000 3.32 0.00 0.00 3.86
2187 2217 0.924823 AAATGCTCTCTGGCCTCCAT 59.075 50.000 3.32 0.00 30.82 3.41
2188 2218 0.473326 AATGCTCTCTGGCCTCCATC 59.527 55.000 3.32 0.00 30.82 3.51
2189 2219 1.756408 ATGCTCTCTGGCCTCCATCG 61.756 60.000 3.32 0.00 30.82 3.84
2190 2220 3.136750 CTCTCTGGCCTCCATCGG 58.863 66.667 3.32 0.00 30.82 4.18
2191 2221 1.456518 CTCTCTGGCCTCCATCGGA 60.457 63.158 3.32 0.00 30.82 4.55
2201 2231 0.309302 CTCCATCGGAGTGAGTAGCG 59.691 60.000 1.64 0.00 44.25 4.26
2202 2232 0.107361 TCCATCGGAGTGAGTAGCGA 60.107 55.000 0.00 0.00 0.00 4.93
2203 2233 0.029567 CCATCGGAGTGAGTAGCGAC 59.970 60.000 0.00 0.00 0.00 5.19
2204 2234 0.029567 CATCGGAGTGAGTAGCGACC 59.970 60.000 0.00 0.00 0.00 4.79
2205 2235 0.393944 ATCGGAGTGAGTAGCGACCA 60.394 55.000 0.00 0.00 0.00 4.02
2206 2236 1.136984 CGGAGTGAGTAGCGACCAC 59.863 63.158 9.46 9.46 0.00 4.16
2207 2237 1.136984 GGAGTGAGTAGCGACCACG 59.863 63.158 11.00 0.00 42.93 4.94
2208 2238 1.303799 GGAGTGAGTAGCGACCACGA 61.304 60.000 11.00 0.00 42.66 4.35
2209 2239 0.520404 GAGTGAGTAGCGACCACGAA 59.480 55.000 11.00 0.00 42.66 3.85
2210 2240 0.240411 AGTGAGTAGCGACCACGAAC 59.760 55.000 11.00 0.00 42.66 3.95
2211 2241 1.063951 GTGAGTAGCGACCACGAACG 61.064 60.000 0.00 0.00 42.66 3.95
2212 2242 1.513586 GAGTAGCGACCACGAACGG 60.514 63.158 0.00 0.00 42.66 4.44
2213 2243 1.915614 GAGTAGCGACCACGAACGGA 61.916 60.000 0.00 0.00 42.66 4.69
2214 2244 1.138247 GTAGCGACCACGAACGGAT 59.862 57.895 0.00 0.00 42.66 4.18
2215 2245 0.864797 GTAGCGACCACGAACGGATC 60.865 60.000 0.00 0.00 42.66 3.36
2216 2246 1.307355 TAGCGACCACGAACGGATCA 61.307 55.000 0.00 0.00 42.66 2.92
2217 2247 2.442188 GCGACCACGAACGGATCAC 61.442 63.158 0.00 0.00 42.66 3.06
2218 2248 1.211969 CGACCACGAACGGATCACT 59.788 57.895 0.00 0.00 42.66 3.41
2219 2249 1.071019 CGACCACGAACGGATCACTG 61.071 60.000 0.00 0.00 42.66 3.66
2220 2250 0.038526 GACCACGAACGGATCACTGT 60.039 55.000 0.00 0.00 37.19 3.55
2221 2251 0.038526 ACCACGAACGGATCACTGTC 60.039 55.000 0.00 0.00 34.15 3.51
2222 2252 1.071019 CCACGAACGGATCACTGTCG 61.071 60.000 0.00 0.37 34.15 4.35
2223 2253 0.386858 CACGAACGGATCACTGTCGT 60.387 55.000 7.03 7.03 38.55 4.34
2224 2254 0.386858 ACGAACGGATCACTGTCGTG 60.387 55.000 10.84 0.00 42.59 4.35
2225 2255 1.071019 CGAACGGATCACTGTCGTGG 61.071 60.000 0.00 0.00 41.53 4.94
2226 2256 1.352156 GAACGGATCACTGTCGTGGC 61.352 60.000 0.00 0.00 41.53 5.01
2227 2257 1.816863 AACGGATCACTGTCGTGGCT 61.817 55.000 0.00 0.00 41.53 4.75
2228 2258 1.517257 CGGATCACTGTCGTGGCTC 60.517 63.158 0.00 0.00 41.53 4.70
2229 2259 1.517257 GGATCACTGTCGTGGCTCG 60.517 63.158 1.94 1.94 41.53 5.03
2230 2260 1.506718 GATCACTGTCGTGGCTCGA 59.493 57.895 7.67 7.67 46.83 4.04
2240 2270 3.048337 TCGTGGCTCGAAAAATAACCT 57.952 42.857 9.46 0.00 45.98 3.50
2241 2271 2.739913 TCGTGGCTCGAAAAATAACCTG 59.260 45.455 9.46 0.00 45.98 4.00
2242 2272 2.727916 CGTGGCTCGAAAAATAACCTGC 60.728 50.000 2.21 0.00 42.86 4.85
2243 2273 2.227865 GTGGCTCGAAAAATAACCTGCA 59.772 45.455 0.00 0.00 0.00 4.41
2244 2274 2.887783 TGGCTCGAAAAATAACCTGCAA 59.112 40.909 0.00 0.00 0.00 4.08
2245 2275 3.319405 TGGCTCGAAAAATAACCTGCAAA 59.681 39.130 0.00 0.00 0.00 3.68
2246 2276 4.202161 TGGCTCGAAAAATAACCTGCAAAA 60.202 37.500 0.00 0.00 0.00 2.44
2247 2277 4.747605 GGCTCGAAAAATAACCTGCAAAAA 59.252 37.500 0.00 0.00 0.00 1.94
2248 2278 5.107491 GGCTCGAAAAATAACCTGCAAAAAG 60.107 40.000 0.00 0.00 0.00 2.27
2249 2279 5.462068 GCTCGAAAAATAACCTGCAAAAAGT 59.538 36.000 0.00 0.00 0.00 2.66
2250 2280 6.639279 GCTCGAAAAATAACCTGCAAAAAGTA 59.361 34.615 0.00 0.00 0.00 2.24
2251 2281 7.168469 GCTCGAAAAATAACCTGCAAAAAGTAA 59.832 33.333 0.00 0.00 0.00 2.24
2252 2282 8.928270 TCGAAAAATAACCTGCAAAAAGTAAA 57.072 26.923 0.00 0.00 0.00 2.01
2253 2283 9.535878 TCGAAAAATAACCTGCAAAAAGTAAAT 57.464 25.926 0.00 0.00 0.00 1.40
2257 2287 9.752961 AAAATAACCTGCAAAAAGTAAATACGT 57.247 25.926 0.00 0.00 0.00 3.57
2258 2288 8.736751 AATAACCTGCAAAAAGTAAATACGTG 57.263 30.769 0.00 0.00 0.00 4.49
2259 2289 6.380095 AACCTGCAAAAAGTAAATACGTGA 57.620 33.333 0.00 0.00 0.00 4.35
2260 2290 6.569179 ACCTGCAAAAAGTAAATACGTGAT 57.431 33.333 0.00 0.00 0.00 3.06
2261 2291 7.675962 ACCTGCAAAAAGTAAATACGTGATA 57.324 32.000 0.00 0.00 0.00 2.15
2262 2292 7.524065 ACCTGCAAAAAGTAAATACGTGATAC 58.476 34.615 0.00 0.00 0.00 2.24
2263 2293 7.389607 ACCTGCAAAAAGTAAATACGTGATACT 59.610 33.333 0.00 0.85 0.00 2.12
2264 2294 7.903431 CCTGCAAAAAGTAAATACGTGATACTC 59.097 37.037 0.00 0.00 0.00 2.59
2265 2295 7.745015 TGCAAAAAGTAAATACGTGATACTCC 58.255 34.615 0.00 0.00 0.00 3.85
2266 2296 7.148373 TGCAAAAAGTAAATACGTGATACTCCC 60.148 37.037 0.00 0.00 0.00 4.30
2267 2297 7.065443 GCAAAAAGTAAATACGTGATACTCCCT 59.935 37.037 0.00 0.00 0.00 4.20
2268 2298 8.601476 CAAAAAGTAAATACGTGATACTCCCTC 58.399 37.037 0.00 0.00 0.00 4.30
2269 2299 6.402456 AAGTAAATACGTGATACTCCCTCC 57.598 41.667 0.00 0.00 0.00 4.30
2270 2300 4.518211 AGTAAATACGTGATACTCCCTCCG 59.482 45.833 0.00 0.00 0.00 4.63
2271 2301 2.653234 ATACGTGATACTCCCTCCGT 57.347 50.000 0.00 0.00 0.00 4.69
2272 2302 1.959042 TACGTGATACTCCCTCCGTC 58.041 55.000 0.00 0.00 0.00 4.79
2273 2303 0.750911 ACGTGATACTCCCTCCGTCC 60.751 60.000 0.00 0.00 0.00 4.79
2274 2304 1.783031 CGTGATACTCCCTCCGTCCG 61.783 65.000 0.00 0.00 0.00 4.79
2275 2305 0.750911 GTGATACTCCCTCCGTCCGT 60.751 60.000 0.00 0.00 0.00 4.69
2276 2306 0.750546 TGATACTCCCTCCGTCCGTG 60.751 60.000 0.00 0.00 0.00 4.94
2277 2307 0.465097 GATACTCCCTCCGTCCGTGA 60.465 60.000 0.00 0.00 0.00 4.35
2278 2308 0.033796 ATACTCCCTCCGTCCGTGAA 60.034 55.000 0.00 0.00 0.00 3.18
2279 2309 0.033796 TACTCCCTCCGTCCGTGAAT 60.034 55.000 0.00 0.00 0.00 2.57
2280 2310 0.033796 ACTCCCTCCGTCCGTGAATA 60.034 55.000 0.00 0.00 0.00 1.75
2281 2311 1.108776 CTCCCTCCGTCCGTGAATAA 58.891 55.000 0.00 0.00 0.00 1.40
2282 2312 1.067212 CTCCCTCCGTCCGTGAATAAG 59.933 57.143 0.00 0.00 0.00 1.73
2283 2313 0.822164 CCCTCCGTCCGTGAATAAGT 59.178 55.000 0.00 0.00 0.00 2.24
2284 2314 1.470979 CCCTCCGTCCGTGAATAAGTG 60.471 57.143 0.00 0.00 0.00 3.16
2285 2315 1.203994 CCTCCGTCCGTGAATAAGTGT 59.796 52.381 0.00 0.00 0.00 3.55
2286 2316 2.424601 CCTCCGTCCGTGAATAAGTGTA 59.575 50.000 0.00 0.00 0.00 2.90
2287 2317 3.432782 CTCCGTCCGTGAATAAGTGTAC 58.567 50.000 0.00 0.00 0.00 2.90
2288 2318 3.084039 TCCGTCCGTGAATAAGTGTACT 58.916 45.455 0.00 0.00 0.00 2.73
2289 2319 3.507233 TCCGTCCGTGAATAAGTGTACTT 59.493 43.478 2.51 2.51 39.85 2.24
2290 2320 3.855950 CCGTCCGTGAATAAGTGTACTTC 59.144 47.826 0.00 0.00 37.40 3.01
2291 2321 4.380233 CCGTCCGTGAATAAGTGTACTTCT 60.380 45.833 0.00 0.00 37.40 2.85
2292 2322 5.163723 CCGTCCGTGAATAAGTGTACTTCTA 60.164 44.000 0.00 0.00 37.40 2.10
2293 2323 5.964168 CGTCCGTGAATAAGTGTACTTCTAG 59.036 44.000 0.00 0.00 37.40 2.43
2294 2324 5.742926 GTCCGTGAATAAGTGTACTTCTAGC 59.257 44.000 0.00 0.00 37.40 3.42
2295 2325 5.651139 TCCGTGAATAAGTGTACTTCTAGCT 59.349 40.000 0.00 0.00 37.40 3.32
2296 2326 6.152323 TCCGTGAATAAGTGTACTTCTAGCTT 59.848 38.462 0.00 0.00 37.40 3.74
2297 2327 6.812160 CCGTGAATAAGTGTACTTCTAGCTTT 59.188 38.462 0.00 0.00 37.40 3.51
2298 2328 7.331193 CCGTGAATAAGTGTACTTCTAGCTTTT 59.669 37.037 0.00 0.00 37.40 2.27
2299 2329 8.162880 CGTGAATAAGTGTACTTCTAGCTTTTG 58.837 37.037 0.00 0.00 37.40 2.44
2300 2330 8.989980 GTGAATAAGTGTACTTCTAGCTTTTGT 58.010 33.333 0.00 0.00 37.40 2.83
2301 2331 9.204570 TGAATAAGTGTACTTCTAGCTTTTGTC 57.795 33.333 0.00 0.00 37.40 3.18
2302 2332 8.549338 AATAAGTGTACTTCTAGCTTTTGTCC 57.451 34.615 0.00 0.00 37.40 4.02
2303 2333 5.810080 AGTGTACTTCTAGCTTTTGTCCT 57.190 39.130 0.00 0.00 0.00 3.85
2304 2334 6.912951 AGTGTACTTCTAGCTTTTGTCCTA 57.087 37.500 0.00 0.00 0.00 2.94
2305 2335 6.926313 AGTGTACTTCTAGCTTTTGTCCTAG 58.074 40.000 0.00 0.00 33.88 3.02
2306 2336 6.071278 AGTGTACTTCTAGCTTTTGTCCTAGG 60.071 42.308 0.82 0.82 33.50 3.02
2307 2337 5.778750 TGTACTTCTAGCTTTTGTCCTAGGT 59.221 40.000 9.08 0.00 33.50 3.08
2308 2338 5.408880 ACTTCTAGCTTTTGTCCTAGGTC 57.591 43.478 9.08 3.43 33.50 3.85
2309 2339 4.838986 ACTTCTAGCTTTTGTCCTAGGTCA 59.161 41.667 9.08 6.65 33.50 4.02
2310 2340 5.307196 ACTTCTAGCTTTTGTCCTAGGTCAA 59.693 40.000 16.29 16.29 33.50 3.18
2311 2341 5.818678 TCTAGCTTTTGTCCTAGGTCAAA 57.181 39.130 24.62 24.62 33.50 2.69
2312 2342 5.794894 TCTAGCTTTTGTCCTAGGTCAAAG 58.205 41.667 26.12 21.95 35.40 2.77
2313 2343 4.439253 AGCTTTTGTCCTAGGTCAAAGT 57.561 40.909 26.12 16.26 35.40 2.66
2314 2344 4.793201 AGCTTTTGTCCTAGGTCAAAGTT 58.207 39.130 26.12 18.27 35.40 2.66
2315 2345 5.201243 AGCTTTTGTCCTAGGTCAAAGTTT 58.799 37.500 26.12 16.27 35.40 2.66
2316 2346 5.656859 AGCTTTTGTCCTAGGTCAAAGTTTT 59.343 36.000 26.12 14.96 35.40 2.43
2317 2347 6.831868 AGCTTTTGTCCTAGGTCAAAGTTTTA 59.168 34.615 26.12 15.04 35.40 1.52
2318 2348 7.013369 AGCTTTTGTCCTAGGTCAAAGTTTTAG 59.987 37.037 26.12 21.91 35.40 1.85
2319 2349 7.012989 GCTTTTGTCCTAGGTCAAAGTTTTAGA 59.987 37.037 26.12 13.94 35.40 2.10
2320 2350 8.810990 TTTTGTCCTAGGTCAAAGTTTTAGAA 57.189 30.769 26.12 12.21 35.40 2.10
2321 2351 7.797038 TTGTCCTAGGTCAAAGTTTTAGAAC 57.203 36.000 17.67 0.18 35.97 3.01
2334 2364 6.775594 AGTTTTAGAACTTTGACCAGCTTT 57.224 33.333 0.00 0.00 43.48 3.51
2335 2365 7.875327 AGTTTTAGAACTTTGACCAGCTTTA 57.125 32.000 0.00 0.00 43.48 1.85
2336 2366 8.465273 AGTTTTAGAACTTTGACCAGCTTTAT 57.535 30.769 0.00 0.00 43.48 1.40
2337 2367 9.569122 AGTTTTAGAACTTTGACCAGCTTTATA 57.431 29.630 0.00 0.00 43.48 0.98
2338 2368 9.827411 GTTTTAGAACTTTGACCAGCTTTATAG 57.173 33.333 0.00 0.00 32.91 1.31
2339 2369 8.561738 TTTAGAACTTTGACCAGCTTTATAGG 57.438 34.615 0.00 0.00 0.00 2.57
2340 2370 6.374417 AGAACTTTGACCAGCTTTATAGGA 57.626 37.500 0.00 0.00 0.00 2.94
2341 2371 6.779860 AGAACTTTGACCAGCTTTATAGGAA 58.220 36.000 0.00 0.00 0.00 3.36
2342 2372 7.231467 AGAACTTTGACCAGCTTTATAGGAAA 58.769 34.615 0.00 0.00 0.00 3.13
2343 2373 7.724061 AGAACTTTGACCAGCTTTATAGGAAAA 59.276 33.333 0.00 0.00 0.00 2.29
2344 2374 7.833285 ACTTTGACCAGCTTTATAGGAAAAA 57.167 32.000 0.00 0.00 0.00 1.94
2345 2375 7.886338 ACTTTGACCAGCTTTATAGGAAAAAG 58.114 34.615 12.96 12.96 37.08 2.27
2346 2376 7.505923 ACTTTGACCAGCTTTATAGGAAAAAGT 59.494 33.333 13.78 13.78 37.08 2.66
2347 2377 8.927675 TTTGACCAGCTTTATAGGAAAAAGTA 57.072 30.769 0.00 0.00 36.52 2.24
2348 2378 7.916914 TGACCAGCTTTATAGGAAAAAGTAC 57.083 36.000 0.00 0.00 36.52 2.73
2349 2379 7.686434 TGACCAGCTTTATAGGAAAAAGTACT 58.314 34.615 0.00 0.00 36.52 2.73
2350 2380 8.818860 TGACCAGCTTTATAGGAAAAAGTACTA 58.181 33.333 0.00 0.00 36.52 1.82
2351 2381 9.315525 GACCAGCTTTATAGGAAAAAGTACTAG 57.684 37.037 0.00 0.00 36.52 2.57
2352 2382 7.769507 ACCAGCTTTATAGGAAAAAGTACTAGC 59.230 37.037 0.00 0.00 36.52 3.42
2353 2383 7.769044 CCAGCTTTATAGGAAAAAGTACTAGCA 59.231 37.037 0.00 0.00 36.52 3.49
2354 2384 9.331282 CAGCTTTATAGGAAAAAGTACTAGCAT 57.669 33.333 0.00 0.00 36.52 3.79
2355 2385 9.907229 AGCTTTATAGGAAAAAGTACTAGCATT 57.093 29.630 0.00 0.00 36.52 3.56
2363 2393 8.947115 AGGAAAAAGTACTAGCATTTATGACAC 58.053 33.333 0.00 0.00 0.00 3.67
2364 2394 8.947115 GGAAAAAGTACTAGCATTTATGACACT 58.053 33.333 0.00 0.00 0.00 3.55
2476 2506 9.665719 AGTTGGTCAAAATTACAAAACTTTGAT 57.334 25.926 9.12 0.00 39.32 2.57
2490 2520 9.435688 ACAAAACTTTGATTTAAGACAAAAGCT 57.564 25.926 9.12 0.00 40.55 3.74
2499 2529 9.772973 TGATTTAAGACAAAAGCTAGAAGTACA 57.227 29.630 0.00 0.00 0.00 2.90
2501 2531 9.780186 ATTTAAGACAAAAGCTAGAAGTACACT 57.220 29.630 0.00 0.00 0.00 3.55
2502 2532 9.609346 TTTAAGACAAAAGCTAGAAGTACACTT 57.391 29.630 0.00 0.00 39.23 3.16
2505 2535 9.780186 AAGACAAAAGCTAGAAGTACACTTATT 57.220 29.630 0.00 0.00 36.11 1.40
2506 2536 9.425577 AGACAAAAGCTAGAAGTACACTTATTC 57.574 33.333 0.00 0.00 36.11 1.75
2507 2537 8.240883 ACAAAAGCTAGAAGTACACTTATTCG 57.759 34.615 0.00 0.00 36.11 3.34
2508 2538 6.889019 AAAGCTAGAAGTACACTTATTCGC 57.111 37.500 0.00 0.00 36.11 4.70
2509 2539 4.599047 AGCTAGAAGTACACTTATTCGCG 58.401 43.478 0.00 0.00 36.11 5.87
2510 2540 3.729716 GCTAGAAGTACACTTATTCGCGG 59.270 47.826 6.13 0.00 36.11 6.46
2511 2541 4.497006 GCTAGAAGTACACTTATTCGCGGA 60.497 45.833 6.13 0.00 36.11 5.54
2512 2542 3.767278 AGAAGTACACTTATTCGCGGAC 58.233 45.455 6.13 0.00 36.11 4.79
2513 2543 2.184385 AGTACACTTATTCGCGGACG 57.816 50.000 6.13 0.00 42.01 4.79
2514 2544 1.194495 GTACACTTATTCGCGGACGG 58.806 55.000 6.13 0.00 40.63 4.79
2515 2545 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
2516 2546 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63
2517 2547 0.870307 CACTTATTCGCGGACGGAGG 60.870 60.000 6.13 0.00 40.63 4.30
2518 2548 1.299926 CTTATTCGCGGACGGAGGG 60.300 63.158 6.13 0.00 40.63 4.30
2519 2549 1.731433 CTTATTCGCGGACGGAGGGA 61.731 60.000 6.13 0.00 40.63 4.20
2520 2550 1.731433 TTATTCGCGGACGGAGGGAG 61.731 60.000 6.13 0.00 40.63 4.30
2521 2551 2.898920 TATTCGCGGACGGAGGGAGT 62.899 60.000 6.13 0.00 40.63 3.85
2522 2552 2.898920 ATTCGCGGACGGAGGGAGTA 62.899 60.000 6.13 0.00 40.63 2.59
2523 2553 2.898920 TTCGCGGACGGAGGGAGTAT 62.899 60.000 6.13 0.00 40.63 2.12
2524 2554 2.487532 CGCGGACGGAGGGAGTATT 61.488 63.158 0.00 0.00 34.97 1.89
2525 2555 1.363080 GCGGACGGAGGGAGTATTC 59.637 63.158 0.00 0.00 0.00 1.75
2526 2556 1.108132 GCGGACGGAGGGAGTATTCT 61.108 60.000 0.00 0.00 0.00 2.40
2527 2557 0.669077 CGGACGGAGGGAGTATTCTG 59.331 60.000 0.00 0.00 0.00 3.02
2528 2558 1.777941 GGACGGAGGGAGTATTCTGT 58.222 55.000 0.00 0.00 35.69 3.41
2529 2559 2.108970 GGACGGAGGGAGTATTCTGTT 58.891 52.381 0.00 0.00 33.23 3.16
2530 2560 3.294214 GGACGGAGGGAGTATTCTGTTA 58.706 50.000 0.00 0.00 33.23 2.41
2531 2561 3.703052 GGACGGAGGGAGTATTCTGTTAA 59.297 47.826 0.00 0.00 33.23 2.01
2532 2562 4.161001 GGACGGAGGGAGTATTCTGTTAAA 59.839 45.833 0.00 0.00 33.23 1.52
2533 2563 5.337813 GGACGGAGGGAGTATTCTGTTAAAA 60.338 44.000 0.00 0.00 33.23 1.52
2534 2564 6.117975 ACGGAGGGAGTATTCTGTTAAAAA 57.882 37.500 0.00 0.00 28.71 1.94
2535 2565 5.936372 ACGGAGGGAGTATTCTGTTAAAAAC 59.064 40.000 0.00 0.00 28.71 2.43
2536 2566 6.171213 CGGAGGGAGTATTCTGTTAAAAACT 58.829 40.000 0.00 0.00 0.00 2.66
2537 2567 7.038799 ACGGAGGGAGTATTCTGTTAAAAACTA 60.039 37.037 0.00 0.00 28.71 2.24
2538 2568 7.820872 CGGAGGGAGTATTCTGTTAAAAACTAA 59.179 37.037 0.00 0.00 0.00 2.24
2539 2569 9.511272 GGAGGGAGTATTCTGTTAAAAACTAAA 57.489 33.333 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.285220 CCAGAAAGTTCGTATGGCATCG 59.715 50.000 1.65 8.13 0.00 3.84
42 43 6.148976 TGCGTGTACTCCATACATATACTCTC 59.851 42.308 0.00 0.00 45.59 3.20
43 44 6.002082 TGCGTGTACTCCATACATATACTCT 58.998 40.000 0.00 0.00 45.59 3.24
130 131 4.315803 GGATTAATCAGTGTATGGGGTCG 58.684 47.826 17.07 0.00 0.00 4.79
190 191 3.114616 CGGAACCAGAGCGTGCTG 61.115 66.667 0.00 0.42 35.66 4.41
196 197 0.951040 CAGAACCACGGAACCAGAGC 60.951 60.000 0.00 0.00 0.00 4.09
221 222 1.136305 AGTACGCCATTACGATGCTGT 59.864 47.619 0.00 0.00 36.70 4.40
422 424 4.664677 GTGGCAGCGACTGTCCGT 62.665 66.667 0.00 0.00 34.88 4.69
458 460 0.319211 TACAGGTTTGACGAGTGCCG 60.319 55.000 0.00 0.00 45.44 5.69
1197 1207 1.206610 GACGAGGAGGGGTAGGAAAAC 59.793 57.143 0.00 0.00 0.00 2.43
1200 1210 1.077212 CGACGAGGAGGGGTAGGAA 60.077 63.158 0.00 0.00 0.00 3.36
1419 1429 2.847234 TCCGGGTGGAAGCAGTGT 60.847 61.111 0.00 0.00 42.85 3.55
1625 1635 1.510383 CAATGGAAATTGGCGGCGA 59.490 52.632 12.98 0.00 0.00 5.54
1626 1636 2.166579 GCAATGGAAATTGGCGGCG 61.167 57.895 0.51 0.51 32.43 6.46
1627 1637 1.815003 GGCAATGGAAATTGGCGGC 60.815 57.895 0.00 0.00 44.98 6.53
1645 1658 2.401766 GCAACAGCCATCGGTCAGG 61.402 63.158 0.00 0.00 0.00 3.86
1647 1660 1.965930 GTGCAACAGCCATCGGTCA 60.966 57.895 0.00 0.00 36.32 4.02
1664 1688 3.269347 GAACACTGGCACGCACGT 61.269 61.111 0.00 0.00 0.00 4.49
1665 1689 3.227372 CTGAACACTGGCACGCACG 62.227 63.158 0.00 0.00 0.00 5.34
1668 1694 4.030452 GCCTGAACACTGGCACGC 62.030 66.667 11.98 0.00 44.38 5.34
1698 1724 1.418342 AAAATGATCCGTCGTCGCCG 61.418 55.000 0.00 0.00 35.54 6.46
1705 1731 5.108385 ACACTCAACAAAAATGATCCGTC 57.892 39.130 0.00 0.00 0.00 4.79
1706 1732 5.514274 AACACTCAACAAAAATGATCCGT 57.486 34.783 0.00 0.00 0.00 4.69
1707 1733 6.826893 AAAACACTCAACAAAAATGATCCG 57.173 33.333 0.00 0.00 0.00 4.18
1734 1762 5.222631 AGCAAAAATGATCCGTTCAAAGAC 58.777 37.500 0.00 0.00 38.03 3.01
1764 1792 8.592809 ACTGATATGCAAATTAACCAAGGAAAA 58.407 29.630 0.00 0.00 0.00 2.29
1768 1796 7.099266 TCACTGATATGCAAATTAACCAAGG 57.901 36.000 0.00 0.00 0.00 3.61
1770 1798 7.701539 ACTCACTGATATGCAAATTAACCAA 57.298 32.000 0.00 0.00 0.00 3.67
1771 1799 7.701539 AACTCACTGATATGCAAATTAACCA 57.298 32.000 0.00 0.00 0.00 3.67
1772 1800 8.986477 AAAACTCACTGATATGCAAATTAACC 57.014 30.769 0.00 0.00 0.00 2.85
1775 1803 9.767684 CGTAAAAACTCACTGATATGCAAATTA 57.232 29.630 0.00 0.00 0.00 1.40
1776 1804 7.754924 CCGTAAAAACTCACTGATATGCAAATT 59.245 33.333 0.00 0.00 0.00 1.82
1777 1805 7.250569 CCGTAAAAACTCACTGATATGCAAAT 58.749 34.615 0.00 0.00 0.00 2.32
1778 1806 6.348950 CCCGTAAAAACTCACTGATATGCAAA 60.349 38.462 0.00 0.00 0.00 3.68
1779 1807 5.123186 CCCGTAAAAACTCACTGATATGCAA 59.877 40.000 0.00 0.00 0.00 4.08
1780 1808 4.634004 CCCGTAAAAACTCACTGATATGCA 59.366 41.667 0.00 0.00 0.00 3.96
1781 1809 4.495844 GCCCGTAAAAACTCACTGATATGC 60.496 45.833 0.00 0.00 0.00 3.14
1782 1810 4.260212 CGCCCGTAAAAACTCACTGATATG 60.260 45.833 0.00 0.00 0.00 1.78
1783 1811 3.869246 CGCCCGTAAAAACTCACTGATAT 59.131 43.478 0.00 0.00 0.00 1.63
1832 1860 2.356135 GGAAGGATGCAGCTCGTTTTA 58.644 47.619 0.22 0.00 0.00 1.52
1848 1878 0.034477 ATGCAAACGGGGTAGGGAAG 60.034 55.000 0.00 0.00 0.00 3.46
1879 1909 3.244044 CCGGGGCAATCTCTTTTCAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
1880 1910 2.298729 CCGGGGCAATCTCTTTTCAAAA 59.701 45.455 0.00 0.00 0.00 2.44
1881 1911 1.892474 CCGGGGCAATCTCTTTTCAAA 59.108 47.619 0.00 0.00 0.00 2.69
1882 1912 1.544724 CCGGGGCAATCTCTTTTCAA 58.455 50.000 0.00 0.00 0.00 2.69
1883 1913 0.965363 GCCGGGGCAATCTCTTTTCA 60.965 55.000 2.18 0.00 41.49 2.69
1884 1914 1.667154 GGCCGGGGCAATCTCTTTTC 61.667 60.000 16.76 0.00 44.11 2.29
1885 1915 1.682344 GGCCGGGGCAATCTCTTTT 60.682 57.895 16.76 0.00 44.11 2.27
1886 1916 2.043953 GGCCGGGGCAATCTCTTT 60.044 61.111 16.76 0.00 44.11 2.52
1887 1917 3.017581 AGGCCGGGGCAATCTCTT 61.018 61.111 23.67 0.00 44.11 2.85
1888 1918 3.483869 GAGGCCGGGGCAATCTCT 61.484 66.667 23.67 0.00 44.11 3.10
1889 1919 3.483869 AGAGGCCGGGGCAATCTC 61.484 66.667 23.67 11.29 44.11 2.75
1890 1920 3.801997 CAGAGGCCGGGGCAATCT 61.802 66.667 23.67 14.61 44.11 2.40
1896 1926 3.643595 TTTGATGCAGAGGCCGGGG 62.644 63.158 2.18 0.00 40.13 5.73
1897 1927 1.250154 TTTTTGATGCAGAGGCCGGG 61.250 55.000 2.18 0.00 40.13 5.73
1898 1928 0.819582 ATTTTTGATGCAGAGGCCGG 59.180 50.000 0.00 0.00 40.13 6.13
1899 1929 3.635331 CATATTTTTGATGCAGAGGCCG 58.365 45.455 0.00 0.00 40.13 6.13
1908 1938 4.869215 TGGCCGTATGCATATTTTTGATG 58.131 39.130 10.16 0.00 43.89 3.07
1909 1939 5.477984 AGATGGCCGTATGCATATTTTTGAT 59.522 36.000 10.16 0.00 43.89 2.57
1910 1940 4.826733 AGATGGCCGTATGCATATTTTTGA 59.173 37.500 10.16 0.00 43.89 2.69
1911 1941 5.125100 AGATGGCCGTATGCATATTTTTG 57.875 39.130 10.16 0.00 43.89 2.44
1912 1942 5.789643 AAGATGGCCGTATGCATATTTTT 57.210 34.783 10.16 0.00 43.89 1.94
1913 1943 7.466746 AATAAGATGGCCGTATGCATATTTT 57.533 32.000 10.16 0.00 43.89 1.82
1914 1944 8.458843 GTTAATAAGATGGCCGTATGCATATTT 58.541 33.333 10.16 0.00 43.89 1.40
1915 1945 7.067008 GGTTAATAAGATGGCCGTATGCATATT 59.933 37.037 10.16 0.00 43.89 1.28
1916 1946 6.542370 GGTTAATAAGATGGCCGTATGCATAT 59.458 38.462 10.16 0.00 43.89 1.78
1917 1947 5.878116 GGTTAATAAGATGGCCGTATGCATA 59.122 40.000 1.16 1.16 43.89 3.14
1918 1948 4.700213 GGTTAATAAGATGGCCGTATGCAT 59.300 41.667 3.79 3.79 43.89 3.96
1919 1949 4.069304 GGTTAATAAGATGGCCGTATGCA 58.931 43.478 0.00 0.00 43.89 3.96
1920 1950 4.069304 TGGTTAATAAGATGGCCGTATGC 58.931 43.478 0.00 0.00 40.16 3.14
1921 1951 6.627395 TTTGGTTAATAAGATGGCCGTATG 57.373 37.500 0.00 0.00 0.00 2.39
1922 1952 8.927675 TTATTTGGTTAATAAGATGGCCGTAT 57.072 30.769 0.00 0.00 34.53 3.06
1923 1953 8.749026 TTTATTTGGTTAATAAGATGGCCGTA 57.251 30.769 0.00 0.00 39.29 4.02
1924 1954 7.648039 TTTATTTGGTTAATAAGATGGCCGT 57.352 32.000 0.00 0.00 39.29 5.68
1925 1955 8.410141 TCTTTTATTTGGTTAATAAGATGGCCG 58.590 33.333 0.00 0.00 39.29 6.13
1937 1967 9.974980 GAACTTGTTGGATCTTTTATTTGGTTA 57.025 29.630 0.00 0.00 0.00 2.85
1938 1968 7.931407 GGAACTTGTTGGATCTTTTATTTGGTT 59.069 33.333 0.00 0.00 0.00 3.67
1939 1969 7.070571 TGGAACTTGTTGGATCTTTTATTTGGT 59.929 33.333 0.00 0.00 0.00 3.67
1940 1970 7.441017 TGGAACTTGTTGGATCTTTTATTTGG 58.559 34.615 0.00 0.00 0.00 3.28
1941 1971 8.885494 TTGGAACTTGTTGGATCTTTTATTTG 57.115 30.769 0.00 0.00 0.00 2.32
1942 1972 9.546428 CTTTGGAACTTGTTGGATCTTTTATTT 57.454 29.630 0.00 0.00 0.00 1.40
1943 1973 8.704668 ACTTTGGAACTTGTTGGATCTTTTATT 58.295 29.630 0.00 0.00 0.00 1.40
1944 1974 8.250143 ACTTTGGAACTTGTTGGATCTTTTAT 57.750 30.769 0.00 0.00 0.00 1.40
1945 1975 7.559897 AGACTTTGGAACTTGTTGGATCTTTTA 59.440 33.333 0.00 0.00 0.00 1.52
1946 1976 6.381133 AGACTTTGGAACTTGTTGGATCTTTT 59.619 34.615 0.00 0.00 0.00 2.27
1947 1977 5.893824 AGACTTTGGAACTTGTTGGATCTTT 59.106 36.000 0.00 0.00 0.00 2.52
1948 1978 5.449553 AGACTTTGGAACTTGTTGGATCTT 58.550 37.500 0.00 0.00 0.00 2.40
1949 1979 5.053978 AGACTTTGGAACTTGTTGGATCT 57.946 39.130 0.00 0.00 0.00 2.75
1950 1980 4.216472 GGAGACTTTGGAACTTGTTGGATC 59.784 45.833 0.00 0.00 0.00 3.36
1951 1981 4.145052 GGAGACTTTGGAACTTGTTGGAT 58.855 43.478 0.00 0.00 0.00 3.41
1952 1982 3.053991 TGGAGACTTTGGAACTTGTTGGA 60.054 43.478 0.00 0.00 0.00 3.53
1953 1983 3.287222 TGGAGACTTTGGAACTTGTTGG 58.713 45.455 0.00 0.00 0.00 3.77
1954 1984 4.399303 AGTTGGAGACTTTGGAACTTGTTG 59.601 41.667 0.00 0.00 33.92 3.33
1955 1985 4.399303 CAGTTGGAGACTTTGGAACTTGTT 59.601 41.667 0.00 0.00 36.10 2.83
1956 1986 3.947834 CAGTTGGAGACTTTGGAACTTGT 59.052 43.478 0.00 0.00 36.10 3.16
1957 1987 3.316308 CCAGTTGGAGACTTTGGAACTTG 59.684 47.826 0.00 0.00 36.10 3.16
1958 1988 3.202151 TCCAGTTGGAGACTTTGGAACTT 59.798 43.478 0.00 0.00 39.78 2.66
1959 1989 2.777692 TCCAGTTGGAGACTTTGGAACT 59.222 45.455 0.00 0.00 39.78 3.01
1960 1990 3.208747 TCCAGTTGGAGACTTTGGAAC 57.791 47.619 0.00 0.00 39.78 3.62
1961 1991 3.943671 TTCCAGTTGGAGACTTTGGAA 57.056 42.857 0.51 0.39 46.36 3.53
1962 1992 3.943671 TTTCCAGTTGGAGACTTTGGA 57.056 42.857 0.51 0.00 46.36 3.53
1963 1993 4.402474 AGTTTTTCCAGTTGGAGACTTTGG 59.598 41.667 0.51 0.00 46.36 3.28
1964 1994 5.125417 TCAGTTTTTCCAGTTGGAGACTTTG 59.875 40.000 0.51 0.48 46.36 2.77
1965 1995 5.261216 TCAGTTTTTCCAGTTGGAGACTTT 58.739 37.500 0.51 0.00 46.36 2.66
1966 1996 4.855340 TCAGTTTTTCCAGTTGGAGACTT 58.145 39.130 0.51 0.00 46.36 3.01
1967 1997 4.503714 TCAGTTTTTCCAGTTGGAGACT 57.496 40.909 0.51 4.87 46.36 3.24
1968 1998 5.576447 TTTCAGTTTTTCCAGTTGGAGAC 57.424 39.130 0.51 2.80 46.36 3.36
1969 1999 5.949354 TCTTTTCAGTTTTTCCAGTTGGAGA 59.051 36.000 0.51 0.00 46.36 3.71
1970 2000 6.207691 TCTTTTCAGTTTTTCCAGTTGGAG 57.792 37.500 0.51 0.00 46.36 3.86
1971 2001 6.790232 ATCTTTTCAGTTTTTCCAGTTGGA 57.210 33.333 0.00 0.00 43.73 3.53
1972 2002 6.642540 GCTATCTTTTCAGTTTTTCCAGTTGG 59.357 38.462 0.00 0.00 0.00 3.77
1973 2003 7.428826 AGCTATCTTTTCAGTTTTTCCAGTTG 58.571 34.615 0.00 0.00 0.00 3.16
1974 2004 7.285401 TGAGCTATCTTTTCAGTTTTTCCAGTT 59.715 33.333 0.00 0.00 0.00 3.16
1975 2005 6.772716 TGAGCTATCTTTTCAGTTTTTCCAGT 59.227 34.615 0.00 0.00 0.00 4.00
1976 2006 7.080724 GTGAGCTATCTTTTCAGTTTTTCCAG 58.919 38.462 0.00 0.00 0.00 3.86
1977 2007 6.545666 TGTGAGCTATCTTTTCAGTTTTTCCA 59.454 34.615 0.00 0.00 0.00 3.53
1978 2008 6.858478 GTGTGAGCTATCTTTTCAGTTTTTCC 59.142 38.462 0.00 0.00 0.00 3.13
1979 2009 7.417612 TGTGTGAGCTATCTTTTCAGTTTTTC 58.582 34.615 0.00 0.00 0.00 2.29
1980 2010 7.283127 TCTGTGTGAGCTATCTTTTCAGTTTTT 59.717 33.333 0.00 0.00 0.00 1.94
1981 2011 6.767902 TCTGTGTGAGCTATCTTTTCAGTTTT 59.232 34.615 0.00 0.00 0.00 2.43
1982 2012 6.291377 TCTGTGTGAGCTATCTTTTCAGTTT 58.709 36.000 0.00 0.00 0.00 2.66
1983 2013 5.858381 TCTGTGTGAGCTATCTTTTCAGTT 58.142 37.500 0.00 0.00 0.00 3.16
1984 2014 5.474578 TCTGTGTGAGCTATCTTTTCAGT 57.525 39.130 0.00 0.00 0.00 3.41
1997 2027 1.542915 CCCATTTTGGCTCTGTGTGAG 59.457 52.381 0.00 0.00 45.33 3.51
1998 2028 1.619654 CCCATTTTGGCTCTGTGTGA 58.380 50.000 0.00 0.00 35.79 3.58
2008 2038 4.576463 GTCTGTGTATCTAGCCCATTTTGG 59.424 45.833 0.00 0.00 37.25 3.28
2009 2039 5.431765 AGTCTGTGTATCTAGCCCATTTTG 58.568 41.667 0.00 0.00 0.00 2.44
2010 2040 5.700402 AGTCTGTGTATCTAGCCCATTTT 57.300 39.130 0.00 0.00 0.00 1.82
2011 2041 5.221541 GCTAGTCTGTGTATCTAGCCCATTT 60.222 44.000 10.99 0.00 46.04 2.32
2012 2042 4.282195 GCTAGTCTGTGTATCTAGCCCATT 59.718 45.833 10.99 0.00 46.04 3.16
2013 2043 3.829601 GCTAGTCTGTGTATCTAGCCCAT 59.170 47.826 10.99 0.00 46.04 4.00
2014 2044 3.223435 GCTAGTCTGTGTATCTAGCCCA 58.777 50.000 10.99 0.00 46.04 5.36
2015 2045 3.926821 GCTAGTCTGTGTATCTAGCCC 57.073 52.381 10.99 0.00 46.04 5.19
2018 2048 6.701145 TTCTTGGCTAGTCTGTGTATCTAG 57.299 41.667 0.00 0.00 35.60 2.43
2019 2049 7.396339 TCTTTTCTTGGCTAGTCTGTGTATCTA 59.604 37.037 0.00 0.00 0.00 1.98
2020 2050 6.211584 TCTTTTCTTGGCTAGTCTGTGTATCT 59.788 38.462 0.00 0.00 0.00 1.98
2021 2051 6.398918 TCTTTTCTTGGCTAGTCTGTGTATC 58.601 40.000 0.00 0.00 0.00 2.24
2022 2052 6.360370 TCTTTTCTTGGCTAGTCTGTGTAT 57.640 37.500 0.00 0.00 0.00 2.29
2023 2053 5.801531 TCTTTTCTTGGCTAGTCTGTGTA 57.198 39.130 0.00 0.00 0.00 2.90
2024 2054 4.689612 TCTTTTCTTGGCTAGTCTGTGT 57.310 40.909 0.00 0.00 0.00 3.72
2025 2055 4.999950 ACATCTTTTCTTGGCTAGTCTGTG 59.000 41.667 0.00 0.00 0.00 3.66
2026 2056 5.221722 TGACATCTTTTCTTGGCTAGTCTGT 60.222 40.000 0.00 0.00 0.00 3.41
2027 2057 5.121454 GTGACATCTTTTCTTGGCTAGTCTG 59.879 44.000 0.00 0.00 0.00 3.51
2028 2058 5.221722 TGTGACATCTTTTCTTGGCTAGTCT 60.222 40.000 0.00 0.00 0.00 3.24
2029 2059 4.997395 TGTGACATCTTTTCTTGGCTAGTC 59.003 41.667 0.00 0.00 0.00 2.59
2030 2060 4.973168 TGTGACATCTTTTCTTGGCTAGT 58.027 39.130 0.00 0.00 0.00 2.57
2031 2061 5.335191 GGTTGTGACATCTTTTCTTGGCTAG 60.335 44.000 0.00 0.00 0.00 3.42
2032 2062 4.518970 GGTTGTGACATCTTTTCTTGGCTA 59.481 41.667 0.00 0.00 0.00 3.93
2033 2063 3.319122 GGTTGTGACATCTTTTCTTGGCT 59.681 43.478 0.00 0.00 0.00 4.75
2034 2064 3.642705 GGTTGTGACATCTTTTCTTGGC 58.357 45.455 0.00 0.00 0.00 4.52
2035 2065 3.304659 CCGGTTGTGACATCTTTTCTTGG 60.305 47.826 0.00 0.00 0.00 3.61
2036 2066 3.853307 GCCGGTTGTGACATCTTTTCTTG 60.853 47.826 1.90 0.00 0.00 3.02
2037 2067 2.293399 GCCGGTTGTGACATCTTTTCTT 59.707 45.455 1.90 0.00 0.00 2.52
2038 2068 1.880027 GCCGGTTGTGACATCTTTTCT 59.120 47.619 1.90 0.00 0.00 2.52
2039 2069 1.880027 AGCCGGTTGTGACATCTTTTC 59.120 47.619 1.90 0.00 0.00 2.29
2040 2070 1.608590 CAGCCGGTTGTGACATCTTTT 59.391 47.619 10.61 0.00 0.00 2.27
2041 2071 1.238439 CAGCCGGTTGTGACATCTTT 58.762 50.000 10.61 0.00 0.00 2.52
2042 2072 0.606401 CCAGCCGGTTGTGACATCTT 60.606 55.000 17.69 0.00 0.00 2.40
2043 2073 1.003355 CCAGCCGGTTGTGACATCT 60.003 57.895 17.69 0.00 0.00 2.90
2044 2074 2.690778 GCCAGCCGGTTGTGACATC 61.691 63.158 17.69 0.00 33.28 3.06
2045 2075 1.836999 TAGCCAGCCGGTTGTGACAT 61.837 55.000 17.69 0.78 33.28 3.06
2046 2076 2.046009 TTAGCCAGCCGGTTGTGACA 62.046 55.000 17.69 0.00 33.28 3.58
2047 2077 0.887387 TTTAGCCAGCCGGTTGTGAC 60.887 55.000 17.69 6.34 33.28 3.67
2048 2078 0.605319 CTTTAGCCAGCCGGTTGTGA 60.605 55.000 17.69 0.00 33.28 3.58
2049 2079 0.605319 TCTTTAGCCAGCCGGTTGTG 60.605 55.000 17.69 9.73 33.28 3.33
2050 2080 0.328258 ATCTTTAGCCAGCCGGTTGT 59.672 50.000 17.69 1.85 33.28 3.32
2051 2081 2.158957 TCTATCTTTAGCCAGCCGGTTG 60.159 50.000 11.98 11.98 33.28 3.77
2052 2082 2.116238 TCTATCTTTAGCCAGCCGGTT 58.884 47.619 1.90 0.00 33.28 4.44
2053 2083 1.789523 TCTATCTTTAGCCAGCCGGT 58.210 50.000 1.90 0.00 33.28 5.28
2054 2084 3.118956 CCTATCTATCTTTAGCCAGCCGG 60.119 52.174 0.00 0.00 0.00 6.13
2055 2085 3.511934 ACCTATCTATCTTTAGCCAGCCG 59.488 47.826 0.00 0.00 0.00 5.52
2056 2086 6.607004 TTACCTATCTATCTTTAGCCAGCC 57.393 41.667 0.00 0.00 0.00 4.85
2057 2087 7.672240 AGTTTACCTATCTATCTTTAGCCAGC 58.328 38.462 0.00 0.00 0.00 4.85
2079 2109 9.726438 GTCATGTAATAGGATAGGCAATTAGTT 57.274 33.333 0.00 0.00 0.00 2.24
2080 2110 8.035394 CGTCATGTAATAGGATAGGCAATTAGT 58.965 37.037 0.00 0.00 0.00 2.24
2081 2111 7.010552 GCGTCATGTAATAGGATAGGCAATTAG 59.989 40.741 0.00 0.00 0.00 1.73
2082 2112 6.816640 GCGTCATGTAATAGGATAGGCAATTA 59.183 38.462 0.00 0.00 0.00 1.40
2083 2113 5.643777 GCGTCATGTAATAGGATAGGCAATT 59.356 40.000 0.00 0.00 0.00 2.32
2084 2114 5.178797 GCGTCATGTAATAGGATAGGCAAT 58.821 41.667 0.00 0.00 0.00 3.56
2085 2115 4.562757 GGCGTCATGTAATAGGATAGGCAA 60.563 45.833 0.00 0.00 0.00 4.52
2086 2116 3.056107 GGCGTCATGTAATAGGATAGGCA 60.056 47.826 0.00 0.00 0.00 4.75
2087 2117 3.056107 TGGCGTCATGTAATAGGATAGGC 60.056 47.826 0.00 0.00 0.00 3.93
2088 2118 4.801330 TGGCGTCATGTAATAGGATAGG 57.199 45.455 0.00 0.00 0.00 2.57
2089 2119 5.105351 TGGATGGCGTCATGTAATAGGATAG 60.105 44.000 7.54 0.00 32.98 2.08
2090 2120 4.775253 TGGATGGCGTCATGTAATAGGATA 59.225 41.667 7.54 0.00 32.98 2.59
2091 2121 3.582647 TGGATGGCGTCATGTAATAGGAT 59.417 43.478 7.54 0.00 32.98 3.24
2092 2122 2.969262 TGGATGGCGTCATGTAATAGGA 59.031 45.455 7.54 0.00 32.98 2.94
2093 2123 3.401033 TGGATGGCGTCATGTAATAGG 57.599 47.619 7.54 0.00 32.98 2.57
2094 2124 4.024048 GGTTTGGATGGCGTCATGTAATAG 60.024 45.833 7.54 0.00 32.98 1.73
2095 2125 3.880490 GGTTTGGATGGCGTCATGTAATA 59.120 43.478 7.54 0.00 32.98 0.98
2096 2126 2.687935 GGTTTGGATGGCGTCATGTAAT 59.312 45.455 7.54 0.00 32.98 1.89
2097 2127 2.088423 GGTTTGGATGGCGTCATGTAA 58.912 47.619 7.54 0.00 32.98 2.41
2098 2128 1.745232 GGTTTGGATGGCGTCATGTA 58.255 50.000 7.54 0.00 32.98 2.29
2099 2129 1.305219 CGGTTTGGATGGCGTCATGT 61.305 55.000 7.54 0.00 32.98 3.21
2100 2130 1.429021 CGGTTTGGATGGCGTCATG 59.571 57.895 7.54 0.00 32.98 3.07
2101 2131 1.748879 CCGGTTTGGATGGCGTCAT 60.749 57.895 0.00 0.00 42.00 3.06
2102 2132 2.359354 CCGGTTTGGATGGCGTCA 60.359 61.111 9.27 0.00 42.00 4.35
2103 2133 1.969589 AACCGGTTTGGATGGCGTC 60.970 57.895 15.86 0.00 42.00 5.19
2104 2134 2.114411 AACCGGTTTGGATGGCGT 59.886 55.556 15.86 0.00 42.00 5.68
2105 2135 1.312371 ATCAACCGGTTTGGATGGCG 61.312 55.000 19.55 3.62 40.78 5.69
2106 2136 0.173255 CATCAACCGGTTTGGATGGC 59.827 55.000 27.99 0.00 40.78 4.40
2107 2137 1.832883 TCATCAACCGGTTTGGATGG 58.167 50.000 31.69 20.35 40.78 3.51
2108 2138 4.216257 GGATATCATCAACCGGTTTGGATG 59.784 45.833 29.03 29.03 41.73 3.51
2109 2139 4.104738 AGGATATCATCAACCGGTTTGGAT 59.895 41.667 19.55 21.08 42.00 3.41
2110 2140 3.458118 AGGATATCATCAACCGGTTTGGA 59.542 43.478 19.55 13.84 42.00 3.53
2111 2141 3.565482 CAGGATATCATCAACCGGTTTGG 59.435 47.826 19.55 7.84 46.41 3.28
2112 2142 4.450976 TCAGGATATCATCAACCGGTTTG 58.549 43.478 19.55 15.20 36.42 2.93
2113 2143 4.708177 CTCAGGATATCATCAACCGGTTT 58.292 43.478 19.55 5.23 0.00 3.27
2114 2144 3.495100 GCTCAGGATATCATCAACCGGTT 60.495 47.826 15.86 15.86 0.00 4.44
2115 2145 2.037772 GCTCAGGATATCATCAACCGGT 59.962 50.000 0.00 0.00 0.00 5.28
2116 2146 2.301296 AGCTCAGGATATCATCAACCGG 59.699 50.000 0.00 0.00 0.00 5.28
2117 2147 3.674528 AGCTCAGGATATCATCAACCG 57.325 47.619 4.83 0.00 0.00 4.44
2118 2148 4.284490 TGGTAGCTCAGGATATCATCAACC 59.716 45.833 4.83 3.43 0.00 3.77
2119 2149 5.474578 TGGTAGCTCAGGATATCATCAAC 57.525 43.478 4.83 0.00 0.00 3.18
2120 2150 6.291648 GATGGTAGCTCAGGATATCATCAA 57.708 41.667 4.83 0.00 45.78 2.57
2121 2151 5.929058 GATGGTAGCTCAGGATATCATCA 57.071 43.478 4.83 0.00 45.78 3.07
2122 2152 5.068987 GGAGATGGTAGCTCAGGATATCATC 59.931 48.000 4.83 6.46 46.43 2.92
2123 2153 4.961730 GGAGATGGTAGCTCAGGATATCAT 59.038 45.833 4.83 0.00 37.79 2.45
2124 2154 4.348486 GGAGATGGTAGCTCAGGATATCA 58.652 47.826 4.83 0.00 34.07 2.15
2125 2155 3.704061 GGGAGATGGTAGCTCAGGATATC 59.296 52.174 0.00 0.00 34.07 1.63
2126 2156 3.078153 TGGGAGATGGTAGCTCAGGATAT 59.922 47.826 0.00 0.00 34.07 1.63
2127 2157 2.450886 TGGGAGATGGTAGCTCAGGATA 59.549 50.000 0.00 0.00 34.07 2.59
2128 2158 1.221523 TGGGAGATGGTAGCTCAGGAT 59.778 52.381 0.00 0.00 34.07 3.24
2129 2159 0.636647 TGGGAGATGGTAGCTCAGGA 59.363 55.000 0.00 0.00 34.07 3.86
2130 2160 1.139853 GTTGGGAGATGGTAGCTCAGG 59.860 57.143 0.00 0.00 34.07 3.86
2131 2161 1.202463 CGTTGGGAGATGGTAGCTCAG 60.202 57.143 0.00 0.00 34.07 3.35
2132 2162 0.824109 CGTTGGGAGATGGTAGCTCA 59.176 55.000 0.00 0.00 34.07 4.26
2133 2163 0.105039 CCGTTGGGAGATGGTAGCTC 59.895 60.000 0.00 0.00 34.06 4.09
2134 2164 0.325296 TCCGTTGGGAGATGGTAGCT 60.325 55.000 0.00 0.00 37.43 3.32
2135 2165 0.179081 GTCCGTTGGGAGATGGTAGC 60.179 60.000 0.00 0.00 44.97 3.58
2136 2166 1.137086 CTGTCCGTTGGGAGATGGTAG 59.863 57.143 0.00 0.00 44.97 3.18
2137 2167 1.191535 CTGTCCGTTGGGAGATGGTA 58.808 55.000 0.00 0.00 44.97 3.25
2138 2168 0.544357 TCTGTCCGTTGGGAGATGGT 60.544 55.000 0.00 0.00 44.97 3.55
2139 2169 0.833287 ATCTGTCCGTTGGGAGATGG 59.167 55.000 0.00 0.00 44.97 3.51
2140 2170 1.202580 GGATCTGTCCGTTGGGAGATG 60.203 57.143 0.00 0.00 44.97 2.90
2141 2171 1.123928 GGATCTGTCCGTTGGGAGAT 58.876 55.000 0.00 0.00 44.97 2.75
2142 2172 2.591915 GGATCTGTCCGTTGGGAGA 58.408 57.895 0.00 0.00 44.97 3.71
2151 2181 3.378427 GCATTTGGTTACTGGATCTGTCC 59.622 47.826 0.00 0.00 45.31 4.02
2152 2182 4.265073 AGCATTTGGTTACTGGATCTGTC 58.735 43.478 0.00 0.00 0.00 3.51
2153 2183 4.018960 AGAGCATTTGGTTACTGGATCTGT 60.019 41.667 0.00 0.00 0.00 3.41
2154 2184 4.521146 AGAGCATTTGGTTACTGGATCTG 58.479 43.478 0.00 0.00 0.00 2.90
2155 2185 4.472833 AGAGAGCATTTGGTTACTGGATCT 59.527 41.667 0.00 0.00 0.00 2.75
2156 2186 4.574013 CAGAGAGCATTTGGTTACTGGATC 59.426 45.833 0.00 0.00 0.00 3.36
2157 2187 4.521146 CAGAGAGCATTTGGTTACTGGAT 58.479 43.478 0.00 0.00 0.00 3.41
2158 2188 3.307691 CCAGAGAGCATTTGGTTACTGGA 60.308 47.826 20.82 0.00 44.04 3.86
2159 2189 3.012518 CCAGAGAGCATTTGGTTACTGG 58.987 50.000 15.88 15.88 40.04 4.00
2160 2190 2.421424 GCCAGAGAGCATTTGGTTACTG 59.579 50.000 1.28 0.00 34.43 2.74
2161 2191 2.619074 GGCCAGAGAGCATTTGGTTACT 60.619 50.000 0.00 0.00 34.43 2.24
2162 2192 1.745653 GGCCAGAGAGCATTTGGTTAC 59.254 52.381 0.00 0.00 34.43 2.50
2163 2193 1.635487 AGGCCAGAGAGCATTTGGTTA 59.365 47.619 5.01 0.00 34.43 2.85
2164 2194 0.407139 AGGCCAGAGAGCATTTGGTT 59.593 50.000 5.01 0.00 34.43 3.67
2165 2195 0.034670 GAGGCCAGAGAGCATTTGGT 60.035 55.000 5.01 0.00 34.43 3.67
2166 2196 0.750911 GGAGGCCAGAGAGCATTTGG 60.751 60.000 5.01 0.00 35.06 3.28
2167 2197 0.034767 TGGAGGCCAGAGAGCATTTG 60.035 55.000 5.01 0.00 0.00 2.32
2168 2198 0.924823 ATGGAGGCCAGAGAGCATTT 59.075 50.000 5.01 0.00 36.75 2.32
2169 2199 0.473326 GATGGAGGCCAGAGAGCATT 59.527 55.000 5.01 0.00 36.75 3.56
2170 2200 1.756408 CGATGGAGGCCAGAGAGCAT 61.756 60.000 5.01 0.00 36.75 3.79
2171 2201 2.429767 CGATGGAGGCCAGAGAGCA 61.430 63.158 5.01 0.00 36.75 4.26
2172 2202 2.420890 CGATGGAGGCCAGAGAGC 59.579 66.667 5.01 0.00 36.75 4.09
2173 2203 1.456518 TCCGATGGAGGCCAGAGAG 60.457 63.158 5.01 0.00 36.75 3.20
2174 2204 1.456518 CTCCGATGGAGGCCAGAGA 60.457 63.158 5.01 0.00 45.43 3.10
2175 2205 3.136750 CTCCGATGGAGGCCAGAG 58.863 66.667 5.01 0.00 45.43 3.35
2183 2213 0.107361 TCGCTACTCACTCCGATGGA 60.107 55.000 0.00 0.00 0.00 3.41
2184 2214 0.029567 GTCGCTACTCACTCCGATGG 59.970 60.000 0.00 0.00 31.96 3.51
2185 2215 0.029567 GGTCGCTACTCACTCCGATG 59.970 60.000 0.00 0.00 31.96 3.84
2186 2216 0.393944 TGGTCGCTACTCACTCCGAT 60.394 55.000 0.00 0.00 31.96 4.18
2187 2217 1.002990 TGGTCGCTACTCACTCCGA 60.003 57.895 0.00 0.00 0.00 4.55
2188 2218 1.136984 GTGGTCGCTACTCACTCCG 59.863 63.158 3.71 0.00 0.00 4.63
2189 2219 1.136984 CGTGGTCGCTACTCACTCC 59.863 63.158 7.87 0.00 0.00 3.85
2190 2220 0.520404 TTCGTGGTCGCTACTCACTC 59.480 55.000 7.87 0.00 36.96 3.51
2191 2221 0.240411 GTTCGTGGTCGCTACTCACT 59.760 55.000 7.87 0.00 36.96 3.41
2192 2222 1.063951 CGTTCGTGGTCGCTACTCAC 61.064 60.000 0.00 0.00 36.96 3.51
2193 2223 1.208358 CGTTCGTGGTCGCTACTCA 59.792 57.895 0.00 0.00 36.96 3.41
2194 2224 1.513586 CCGTTCGTGGTCGCTACTC 60.514 63.158 0.00 0.00 36.96 2.59
2195 2225 1.310933 ATCCGTTCGTGGTCGCTACT 61.311 55.000 0.00 0.00 36.96 2.57
2196 2226 0.864797 GATCCGTTCGTGGTCGCTAC 60.865 60.000 0.00 0.00 36.96 3.58
2197 2227 1.307355 TGATCCGTTCGTGGTCGCTA 61.307 55.000 0.00 0.00 36.96 4.26
2198 2228 2.181021 GATCCGTTCGTGGTCGCT 59.819 61.111 0.00 0.00 36.96 4.93
2199 2229 2.126228 TGATCCGTTCGTGGTCGC 60.126 61.111 0.00 0.00 36.96 5.19
2200 2230 1.071019 CAGTGATCCGTTCGTGGTCG 61.071 60.000 0.00 0.00 38.55 4.79
2201 2231 0.038526 ACAGTGATCCGTTCGTGGTC 60.039 55.000 0.00 0.00 0.00 4.02
2202 2232 0.038526 GACAGTGATCCGTTCGTGGT 60.039 55.000 0.00 0.00 0.00 4.16
2203 2233 1.071019 CGACAGTGATCCGTTCGTGG 61.071 60.000 0.00 0.00 0.00 4.94
2204 2234 0.386858 ACGACAGTGATCCGTTCGTG 60.387 55.000 0.00 0.00 32.03 4.35
2205 2235 1.954528 ACGACAGTGATCCGTTCGT 59.045 52.632 0.00 0.00 32.03 3.85
2206 2236 4.861883 ACGACAGTGATCCGTTCG 57.138 55.556 0.00 0.00 32.03 3.95
2221 2251 2.727916 GCAGGTTATTTTTCGAGCCACG 60.728 50.000 0.00 0.00 44.09 4.94
2222 2252 2.227865 TGCAGGTTATTTTTCGAGCCAC 59.772 45.455 0.00 0.00 0.00 5.01
2223 2253 2.509569 TGCAGGTTATTTTTCGAGCCA 58.490 42.857 0.00 0.00 0.00 4.75
2224 2254 3.569250 TTGCAGGTTATTTTTCGAGCC 57.431 42.857 0.00 0.00 0.00 4.70
2225 2255 5.462068 ACTTTTTGCAGGTTATTTTTCGAGC 59.538 36.000 0.00 0.00 0.00 5.03
2226 2256 8.568732 TTACTTTTTGCAGGTTATTTTTCGAG 57.431 30.769 0.00 0.00 0.00 4.04
2227 2257 8.928270 TTTACTTTTTGCAGGTTATTTTTCGA 57.072 26.923 0.00 0.00 0.00 3.71
2231 2261 9.752961 ACGTATTTACTTTTTGCAGGTTATTTT 57.247 25.926 0.00 0.00 0.00 1.82
2232 2262 9.187455 CACGTATTTACTTTTTGCAGGTTATTT 57.813 29.630 0.00 0.00 0.00 1.40
2233 2263 8.569641 TCACGTATTTACTTTTTGCAGGTTATT 58.430 29.630 0.00 0.00 0.00 1.40
2234 2264 8.101654 TCACGTATTTACTTTTTGCAGGTTAT 57.898 30.769 0.00 0.00 0.00 1.89
2235 2265 7.493743 TCACGTATTTACTTTTTGCAGGTTA 57.506 32.000 0.00 0.00 0.00 2.85
2236 2266 6.380095 TCACGTATTTACTTTTTGCAGGTT 57.620 33.333 0.00 0.00 0.00 3.50
2237 2267 6.569179 ATCACGTATTTACTTTTTGCAGGT 57.431 33.333 0.00 0.00 0.00 4.00
2238 2268 7.748847 AGTATCACGTATTTACTTTTTGCAGG 58.251 34.615 0.00 0.00 0.00 4.85
2239 2269 7.903431 GGAGTATCACGTATTTACTTTTTGCAG 59.097 37.037 0.00 0.00 36.25 4.41
2240 2270 7.148373 GGGAGTATCACGTATTTACTTTTTGCA 60.148 37.037 0.00 0.00 36.25 4.08
2241 2271 7.184779 GGGAGTATCACGTATTTACTTTTTGC 58.815 38.462 0.00 0.00 36.25 3.68
2256 2286 0.750911 ACGGACGGAGGGAGTATCAC 60.751 60.000 0.00 0.00 40.51 3.06
2257 2287 0.750546 CACGGACGGAGGGAGTATCA 60.751 60.000 0.00 0.00 36.25 2.15
2258 2288 0.465097 TCACGGACGGAGGGAGTATC 60.465 60.000 0.00 0.00 0.00 2.24
2259 2289 0.033796 TTCACGGACGGAGGGAGTAT 60.034 55.000 0.00 0.00 0.00 2.12
2260 2290 0.033796 ATTCACGGACGGAGGGAGTA 60.034 55.000 0.00 0.00 0.00 2.59
2261 2291 0.033796 TATTCACGGACGGAGGGAGT 60.034 55.000 0.00 0.00 0.00 3.85
2262 2292 1.067212 CTTATTCACGGACGGAGGGAG 59.933 57.143 0.00 0.00 0.00 4.30
2263 2293 1.108776 CTTATTCACGGACGGAGGGA 58.891 55.000 0.00 0.00 0.00 4.20
2264 2294 0.822164 ACTTATTCACGGACGGAGGG 59.178 55.000 0.00 0.00 0.00 4.30
2265 2295 1.203994 ACACTTATTCACGGACGGAGG 59.796 52.381 0.00 0.00 0.00 4.30
2266 2296 2.649331 ACACTTATTCACGGACGGAG 57.351 50.000 0.00 0.00 0.00 4.63
2267 2297 3.084039 AGTACACTTATTCACGGACGGA 58.916 45.455 0.00 0.00 0.00 4.69
2268 2298 3.498927 AGTACACTTATTCACGGACGG 57.501 47.619 0.00 0.00 0.00 4.79
2269 2299 4.730657 AGAAGTACACTTATTCACGGACG 58.269 43.478 0.00 0.00 36.11 4.79
2270 2300 5.742926 GCTAGAAGTACACTTATTCACGGAC 59.257 44.000 0.00 0.00 36.11 4.79
2271 2301 5.651139 AGCTAGAAGTACACTTATTCACGGA 59.349 40.000 0.00 0.00 36.11 4.69
2272 2302 5.892568 AGCTAGAAGTACACTTATTCACGG 58.107 41.667 0.00 0.00 36.11 4.94
2273 2303 7.813852 AAAGCTAGAAGTACACTTATTCACG 57.186 36.000 0.00 0.00 36.11 4.35
2274 2304 8.989980 ACAAAAGCTAGAAGTACACTTATTCAC 58.010 33.333 0.00 0.00 36.11 3.18
2275 2305 9.204570 GACAAAAGCTAGAAGTACACTTATTCA 57.795 33.333 0.00 0.00 36.11 2.57
2276 2306 8.657729 GGACAAAAGCTAGAAGTACACTTATTC 58.342 37.037 0.00 0.00 36.11 1.75
2277 2307 8.376270 AGGACAAAAGCTAGAAGTACACTTATT 58.624 33.333 0.00 0.00 36.11 1.40
2278 2308 7.908453 AGGACAAAAGCTAGAAGTACACTTAT 58.092 34.615 0.00 0.00 36.11 1.73
2279 2309 7.299246 AGGACAAAAGCTAGAAGTACACTTA 57.701 36.000 0.00 0.00 36.11 2.24
2280 2310 6.176014 AGGACAAAAGCTAGAAGTACACTT 57.824 37.500 0.00 0.00 39.23 3.16
2281 2311 5.810080 AGGACAAAAGCTAGAAGTACACT 57.190 39.130 0.00 0.00 0.00 3.55
2282 2312 6.100668 CCTAGGACAAAAGCTAGAAGTACAC 58.899 44.000 1.05 0.00 0.00 2.90
2283 2313 5.778750 ACCTAGGACAAAAGCTAGAAGTACA 59.221 40.000 17.98 0.00 0.00 2.90
2284 2314 6.071503 TGACCTAGGACAAAAGCTAGAAGTAC 60.072 42.308 17.98 0.00 0.00 2.73
2285 2315 6.014647 TGACCTAGGACAAAAGCTAGAAGTA 58.985 40.000 17.98 0.00 0.00 2.24
2286 2316 4.838986 TGACCTAGGACAAAAGCTAGAAGT 59.161 41.667 17.98 0.00 0.00 3.01
2287 2317 5.407407 TGACCTAGGACAAAAGCTAGAAG 57.593 43.478 17.98 0.00 0.00 2.85
2288 2318 5.818678 TTGACCTAGGACAAAAGCTAGAA 57.181 39.130 22.01 0.00 0.00 2.10
2289 2319 5.307196 ACTTTGACCTAGGACAAAAGCTAGA 59.693 40.000 30.29 13.98 38.70 2.43
2290 2320 5.552178 ACTTTGACCTAGGACAAAAGCTAG 58.448 41.667 30.29 23.15 38.70 3.42
2291 2321 5.562298 ACTTTGACCTAGGACAAAAGCTA 57.438 39.130 30.29 15.14 38.70 3.32
2292 2322 4.439253 ACTTTGACCTAGGACAAAAGCT 57.561 40.909 30.29 17.88 38.70 3.74
2293 2323 5.515797 AAACTTTGACCTAGGACAAAAGC 57.484 39.130 30.29 7.89 38.70 3.51
2294 2324 8.446599 TCTAAAACTTTGACCTAGGACAAAAG 57.553 34.615 30.29 24.97 38.70 2.27
2295 2325 8.680001 GTTCTAAAACTTTGACCTAGGACAAAA 58.320 33.333 30.29 19.02 38.70 2.44
2296 2326 8.050930 AGTTCTAAAACTTTGACCTAGGACAAA 58.949 33.333 29.31 29.31 43.28 2.83
2297 2327 7.571025 AGTTCTAAAACTTTGACCTAGGACAA 58.429 34.615 20.70 20.70 43.28 3.18
2298 2328 7.133133 AGTTCTAAAACTTTGACCTAGGACA 57.867 36.000 17.98 13.71 43.28 4.02
2312 2342 9.827411 CTATAAAGCTGGTCAAAGTTCTAAAAC 57.173 33.333 0.00 0.00 35.50 2.43
2313 2343 9.010029 CCTATAAAGCTGGTCAAAGTTCTAAAA 57.990 33.333 0.00 0.00 0.00 1.52
2314 2344 8.380099 TCCTATAAAGCTGGTCAAAGTTCTAAA 58.620 33.333 0.00 0.00 0.00 1.85
2315 2345 7.913789 TCCTATAAAGCTGGTCAAAGTTCTAA 58.086 34.615 0.00 0.00 0.00 2.10
2316 2346 7.490657 TCCTATAAAGCTGGTCAAAGTTCTA 57.509 36.000 0.00 0.00 0.00 2.10
2317 2347 6.374417 TCCTATAAAGCTGGTCAAAGTTCT 57.626 37.500 0.00 0.00 0.00 3.01
2318 2348 7.448748 TTTCCTATAAAGCTGGTCAAAGTTC 57.551 36.000 0.00 0.00 0.00 3.01
2319 2349 7.833285 TTTTCCTATAAAGCTGGTCAAAGTT 57.167 32.000 0.00 0.00 0.00 2.66
2320 2350 7.505923 ACTTTTTCCTATAAAGCTGGTCAAAGT 59.494 33.333 10.72 10.72 36.33 2.66
2321 2351 7.886338 ACTTTTTCCTATAAAGCTGGTCAAAG 58.114 34.615 0.00 0.05 36.33 2.77
2322 2352 7.833285 ACTTTTTCCTATAAAGCTGGTCAAA 57.167 32.000 0.00 0.00 36.33 2.69
2323 2353 8.161425 AGTACTTTTTCCTATAAAGCTGGTCAA 58.839 33.333 0.00 0.00 36.33 3.18
2324 2354 7.686434 AGTACTTTTTCCTATAAAGCTGGTCA 58.314 34.615 0.00 0.00 36.33 4.02
2325 2355 9.315525 CTAGTACTTTTTCCTATAAAGCTGGTC 57.684 37.037 0.00 0.00 36.33 4.02
2326 2356 7.769507 GCTAGTACTTTTTCCTATAAAGCTGGT 59.230 37.037 0.00 0.00 36.33 4.00
2327 2357 7.769044 TGCTAGTACTTTTTCCTATAAAGCTGG 59.231 37.037 0.00 0.00 36.33 4.85
2328 2358 8.718102 TGCTAGTACTTTTTCCTATAAAGCTG 57.282 34.615 0.00 0.00 36.33 4.24
2329 2359 9.907229 AATGCTAGTACTTTTTCCTATAAAGCT 57.093 29.630 0.00 0.00 36.33 3.74
2337 2367 8.947115 GTGTCATAAATGCTAGTACTTTTTCCT 58.053 33.333 0.00 0.00 0.00 3.36
2338 2368 8.947115 AGTGTCATAAATGCTAGTACTTTTTCC 58.053 33.333 0.00 0.00 0.00 3.13
2450 2480 9.665719 ATCAAAGTTTTGTAATTTTGACCAACT 57.334 25.926 9.68 0.00 46.20 3.16
2464 2494 9.435688 AGCTTTTGTCTTAAATCAAAGTTTTGT 57.564 25.926 4.67 0.00 39.18 2.83
2473 2503 9.772973 TGTACTTCTAGCTTTTGTCTTAAATCA 57.227 29.630 0.00 0.00 0.00 2.57
2475 2505 9.780186 AGTGTACTTCTAGCTTTTGTCTTAAAT 57.220 29.630 0.00 0.00 0.00 1.40
2476 2506 9.609346 AAGTGTACTTCTAGCTTTTGTCTTAAA 57.391 29.630 0.00 0.00 0.00 1.52
2479 2509 9.780186 AATAAGTGTACTTCTAGCTTTTGTCTT 57.220 29.630 0.00 0.00 37.40 3.01
2480 2510 9.425577 GAATAAGTGTACTTCTAGCTTTTGTCT 57.574 33.333 0.00 0.00 37.40 3.41
2481 2511 8.373992 CGAATAAGTGTACTTCTAGCTTTTGTC 58.626 37.037 0.00 0.00 37.40 3.18
2482 2512 7.148623 GCGAATAAGTGTACTTCTAGCTTTTGT 60.149 37.037 0.00 0.00 37.40 2.83
2483 2513 7.174082 GCGAATAAGTGTACTTCTAGCTTTTG 58.826 38.462 0.00 0.00 37.40 2.44
2484 2514 6.034683 CGCGAATAAGTGTACTTCTAGCTTTT 59.965 38.462 0.00 0.00 37.40 2.27
2485 2515 5.515626 CGCGAATAAGTGTACTTCTAGCTTT 59.484 40.000 0.00 0.00 37.40 3.51
2486 2516 5.035443 CGCGAATAAGTGTACTTCTAGCTT 58.965 41.667 0.00 0.00 37.40 3.74
2487 2517 4.497674 CCGCGAATAAGTGTACTTCTAGCT 60.498 45.833 8.23 0.00 37.40 3.32
2488 2518 3.729716 CCGCGAATAAGTGTACTTCTAGC 59.270 47.826 8.23 3.15 37.40 3.42
2489 2519 4.968788 GTCCGCGAATAAGTGTACTTCTAG 59.031 45.833 8.23 0.00 37.40 2.43
2490 2520 4.494690 CGTCCGCGAATAAGTGTACTTCTA 60.495 45.833 8.23 0.00 41.33 2.10
2491 2521 3.730061 CGTCCGCGAATAAGTGTACTTCT 60.730 47.826 8.23 0.00 41.33 2.85
2492 2522 2.529090 CGTCCGCGAATAAGTGTACTTC 59.471 50.000 8.23 0.00 41.33 3.01
2493 2523 2.523015 CGTCCGCGAATAAGTGTACTT 58.477 47.619 8.23 2.51 41.33 2.24
2494 2524 1.202222 CCGTCCGCGAATAAGTGTACT 60.202 52.381 8.23 0.00 41.33 2.73
2495 2525 1.194495 CCGTCCGCGAATAAGTGTAC 58.806 55.000 8.23 0.00 41.33 2.90
2496 2526 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
2497 2527 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
2498 2528 0.870307 CCTCCGTCCGCGAATAAGTG 60.870 60.000 8.23 0.00 41.33 3.16
2499 2529 1.436336 CCTCCGTCCGCGAATAAGT 59.564 57.895 8.23 0.00 41.33 2.24
2500 2530 1.299926 CCCTCCGTCCGCGAATAAG 60.300 63.158 8.23 0.00 41.33 1.73
2501 2531 1.731433 CTCCCTCCGTCCGCGAATAA 61.731 60.000 8.23 0.00 41.33 1.40
2502 2532 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
2503 2533 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
2504 2534 2.898920 ATACTCCCTCCGTCCGCGAA 62.899 60.000 8.23 0.00 41.33 4.70
2505 2535 2.898920 AATACTCCCTCCGTCCGCGA 62.899 60.000 8.23 0.00 41.33 5.87
2506 2536 2.403671 GAATACTCCCTCCGTCCGCG 62.404 65.000 0.00 0.00 37.95 6.46
2507 2537 1.108132 AGAATACTCCCTCCGTCCGC 61.108 60.000 0.00 0.00 0.00 5.54
2508 2538 0.669077 CAGAATACTCCCTCCGTCCG 59.331 60.000 0.00 0.00 0.00 4.79
2509 2539 1.777941 ACAGAATACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
2510 2540 4.996788 TTAACAGAATACTCCCTCCGTC 57.003 45.455 0.00 0.00 0.00 4.79
2511 2541 5.750352 TTTTAACAGAATACTCCCTCCGT 57.250 39.130 0.00 0.00 0.00 4.69
2512 2542 6.171213 AGTTTTTAACAGAATACTCCCTCCG 58.829 40.000 0.00 0.00 0.00 4.63
2513 2543 9.511272 TTTAGTTTTTAACAGAATACTCCCTCC 57.489 33.333 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.