Multiple sequence alignment - TraesCS3A01G329300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G329300 chr3A 100.000 3232 0 0 1 3232 574460613 574457382 0.000000e+00 5969.0
1 TraesCS3A01G329300 chr3D 94.901 1412 28 12 891 2282 435664099 435662712 0.000000e+00 2169.0
2 TraesCS3A01G329300 chr3D 87.006 354 17 13 2524 2877 435662447 435662123 3.940000e-99 372.0
3 TraesCS3A01G329300 chr3D 87.708 301 15 8 2939 3232 435662126 435661841 6.680000e-87 331.0
4 TraesCS3A01G329300 chr3D 89.529 191 20 0 6 196 435680064 435679874 3.220000e-60 243.0
5 TraesCS3A01G329300 chr3D 94.839 155 4 2 2365 2519 435662685 435662535 4.170000e-59 239.0
6 TraesCS3A01G329300 chr3D 95.876 97 1 3 783 879 435664253 435664160 1.550000e-33 154.0
7 TraesCS3A01G329300 chr3B 95.917 1347 29 5 947 2280 571759134 571757801 0.000000e+00 2159.0
8 TraesCS3A01G329300 chr3B 89.981 519 28 8 2365 2879 571757777 571757279 0.000000e+00 649.0
9 TraesCS3A01G329300 chr3B 98.201 278 5 0 458 735 805048208 805048485 1.350000e-133 486.0
10 TraesCS3A01G329300 chr3B 95.987 299 7 2 2939 3232 571757284 571756986 6.270000e-132 481.0
11 TraesCS3A01G329300 chr3B 92.614 176 13 0 21 196 571761434 571761259 1.490000e-63 254.0
12 TraesCS3A01G329300 chr3B 94.898 98 3 2 782 879 571759320 571759225 5.580000e-33 152.0
13 TraesCS3A01G329300 chr5B 98.566 279 4 0 457 735 423645004 423644726 8.060000e-136 494.0
14 TraesCS3A01G329300 chr5B 89.189 74 6 1 2873 2946 232635910 232635839 1.230000e-14 91.6
15 TraesCS3A01G329300 chr2A 97.880 283 6 0 458 740 768472028 768472310 1.040000e-134 490.0
16 TraesCS3A01G329300 chr2A 87.234 47 6 0 2293 2339 30572289 30572335 2.000000e-03 54.7
17 TraesCS3A01G329300 chr7B 98.208 279 5 0 457 735 710441159 710440881 3.750000e-134 488.0
18 TraesCS3A01G329300 chr7B 87.952 83 10 0 1330 1412 424645227 424645309 7.380000e-17 99.0
19 TraesCS3A01G329300 chr1A 98.208 279 5 0 457 735 320330759 320331037 3.750000e-134 488.0
20 TraesCS3A01G329300 chr1A 89.474 76 4 3 2869 2942 111790511 111790438 3.430000e-15 93.5
21 TraesCS3A01G329300 chr7A 98.201 278 5 0 458 735 696783385 696783108 1.350000e-133 486.0
22 TraesCS3A01G329300 chr7A 90.667 75 2 2 2875 2944 28155621 28155547 9.550000e-16 95.3
23 TraesCS3A01G329300 chr6B 98.201 278 5 0 457 734 715211799 715212076 1.350000e-133 486.0
24 TraesCS3A01G329300 chr6B 97.203 286 8 0 454 739 695005280 695005565 4.850000e-133 484.0
25 TraesCS3A01G329300 chr5A 97.203 286 7 1 460 744 31133721 31134006 1.740000e-132 483.0
26 TraesCS3A01G329300 chr1D 93.056 72 2 1 2874 2942 492364781 492364852 5.700000e-18 102.0
27 TraesCS3A01G329300 chr2D 94.030 67 2 1 2876 2942 623473668 623473732 2.050000e-17 100.0
28 TraesCS3A01G329300 chr7D 95.161 62 3 0 1351 1412 410906265 410906204 7.380000e-17 99.0
29 TraesCS3A01G329300 chr6A 92.754 69 4 1 2874 2942 153375211 153375144 7.380000e-17 99.0
30 TraesCS3A01G329300 chr4A 92.754 69 1 1 2874 2942 604845637 604845701 2.650000e-16 97.1
31 TraesCS3A01G329300 chr4A 86.538 52 4 3 2289 2339 471931245 471931294 2.000000e-03 54.7
32 TraesCS3A01G329300 chr4A 100.000 29 0 0 2311 2339 743345417 743345389 2.000000e-03 54.7
33 TraesCS3A01G329300 chr6D 91.549 71 2 1 2876 2946 322457574 322457508 9.550000e-16 95.3
34 TraesCS3A01G329300 chrUn 86.517 89 7 5 2876 2962 134257846 134257761 3.430000e-15 93.5
35 TraesCS3A01G329300 chr4B 100.000 29 0 0 2311 2339 147367894 147367866 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G329300 chr3A 574457382 574460613 3231 True 5969 5969 100.0000 1 3232 1 chr3A.!!$R1 3231
1 TraesCS3A01G329300 chr3D 435661841 435664253 2412 True 653 2169 92.0660 783 3232 5 chr3D.!!$R2 2449
2 TraesCS3A01G329300 chr3B 571756986 571761434 4448 True 739 2159 93.8794 21 3232 5 chr3B.!!$R1 3211

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
733 2321 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.0 0.00 0.0 0.0 4.58 F
1041 2718 0.476338 GGGCCCAAACCAAACCAAAT 59.524 50.0 19.95 0.0 0.0 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2031 3710 0.036483 TATTGCTCTTGAGCGGCACA 60.036 50.0 16.48 0.0 35.62 4.57 R
2592 4387 0.257039 ATCTCCACTCCAACCATGCC 59.743 55.0 0.00 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.039452 ATCCACATTGCAGCACACA 57.961 47.368 0.00 0.00 0.00 3.72
19 20 0.885879 ATCCACATTGCAGCACACAG 59.114 50.000 0.00 0.00 0.00 3.66
63 64 2.807045 GTCGCTGGCAGTGTCGAG 60.807 66.667 25.87 6.88 0.00 4.04
73 74 2.427506 GCAGTGTCGAGGGAGAAAATT 58.572 47.619 0.00 0.00 0.00 1.82
79 80 5.045869 AGTGTCGAGGGAGAAAATTTCCATA 60.046 40.000 1.57 0.00 36.40 2.74
81 82 6.150474 GTGTCGAGGGAGAAAATTTCCATAAA 59.850 38.462 1.57 0.00 36.40 1.40
94 95 4.957606 TTCCATAAAGGCCTTTCCCTTA 57.042 40.909 33.64 16.91 44.28 2.69
103 104 0.326927 CCTTTCCCTTAACGGCCTCA 59.673 55.000 0.00 0.00 0.00 3.86
129 130 1.133730 GTCCTCCTCGTCTATCCCAGT 60.134 57.143 0.00 0.00 0.00 4.00
135 136 4.462133 TCCTCGTCTATCCCAGTCTTTAG 58.538 47.826 0.00 0.00 0.00 1.85
139 140 3.304123 CGTCTATCCCAGTCTTTAGCTCG 60.304 52.174 0.00 0.00 0.00 5.03
146 147 1.400846 CAGTCTTTAGCTCGGCGAGTA 59.599 52.381 34.41 22.77 31.39 2.59
154 155 1.068083 CTCGGCGAGTATGGCATGT 59.932 57.895 27.92 0.00 43.90 3.21
176 177 0.972983 CTCCCTCTTCCAAGCCTCGA 60.973 60.000 0.00 0.00 0.00 4.04
196 197 1.133668 ACCTCAAGTGGCAAGAAGCTT 60.134 47.619 0.00 0.00 44.79 3.74
197 198 1.538950 CCTCAAGTGGCAAGAAGCTTC 59.461 52.381 19.11 19.11 44.79 3.86
198 199 2.502295 CTCAAGTGGCAAGAAGCTTCT 58.498 47.619 23.49 23.49 44.79 2.85
200 201 2.880890 TCAAGTGGCAAGAAGCTTCTTC 59.119 45.455 33.73 26.39 45.23 2.87
201 202 1.902938 AGTGGCAAGAAGCTTCTTCC 58.097 50.000 33.73 31.94 45.23 3.46
202 203 0.519077 GTGGCAAGAAGCTTCTTCCG 59.481 55.000 33.73 25.23 45.23 4.30
204 205 1.503994 GCAAGAAGCTTCTTCCGGC 59.496 57.895 33.73 29.07 45.23 6.13
206 207 0.670546 CAAGAAGCTTCTTCCGGCGA 60.671 55.000 33.73 0.00 45.23 5.54
207 208 0.670854 AAGAAGCTTCTTCCGGCGAC 60.671 55.000 31.56 1.08 43.72 5.19
208 209 1.374252 GAAGCTTCTTCCGGCGACA 60.374 57.895 19.44 0.00 0.00 4.35
209 210 0.741221 GAAGCTTCTTCCGGCGACAT 60.741 55.000 19.44 0.00 0.00 3.06
227 1294 0.480690 ATTGGTGGCAGTGGTTGGTA 59.519 50.000 0.00 0.00 0.00 3.25
229 1296 0.466555 TGGTGGCAGTGGTTGGTAAC 60.467 55.000 0.00 0.00 0.00 2.50
232 1299 0.840617 TGGCAGTGGTTGGTAACTCA 59.159 50.000 0.00 0.00 37.61 3.41
233 1300 1.235724 GGCAGTGGTTGGTAACTCAC 58.764 55.000 0.00 0.00 34.71 3.51
245 1312 3.650942 TGGTAACTCACTCCAACTCCAAT 59.349 43.478 0.00 0.00 37.61 3.16
251 1318 6.380079 ACTCACTCCAACTCCAATTTCTAT 57.620 37.500 0.00 0.00 0.00 1.98
258 1325 9.232473 ACTCCAACTCCAATTTCTATAGTTTTC 57.768 33.333 0.00 0.00 0.00 2.29
260 1327 8.098286 TCCAACTCCAATTTCTATAGTTTTCGA 58.902 33.333 0.00 0.00 0.00 3.71
269 1336 5.007385 TCTATAGTTTTCGAAGCACCCTC 57.993 43.478 0.00 0.00 0.00 4.30
272 1339 1.202604 AGTTTTCGAAGCACCCTCGAA 60.203 47.619 0.00 3.70 42.92 3.71
274 1341 0.677288 TTTCGAAGCACCCTCGAAGA 59.323 50.000 7.60 0.00 44.78 2.87
289 1631 4.316205 TCGAAGAGCTACACAAAAGACA 57.684 40.909 0.00 0.00 0.00 3.41
294 1636 3.067833 GAGCTACACAAAAGACAGGGAC 58.932 50.000 0.00 0.00 0.00 4.46
297 1639 3.883489 GCTACACAAAAGACAGGGACTTT 59.117 43.478 0.00 0.00 34.60 2.66
301 1643 4.887655 ACACAAAAGACAGGGACTTTTAGG 59.112 41.667 0.00 0.00 42.95 2.69
302 1644 5.130350 CACAAAAGACAGGGACTTTTAGGA 58.870 41.667 0.00 0.00 42.95 2.94
304 1646 4.368565 AAAGACAGGGACTTTTAGGACC 57.631 45.455 0.00 0.00 34.60 4.46
306 1648 4.415224 AGACAGGGACTTTTAGGACCTA 57.585 45.455 0.00 0.00 34.60 3.08
307 1649 4.095211 AGACAGGGACTTTTAGGACCTAC 58.905 47.826 0.00 0.00 34.60 3.18
309 1651 4.500452 ACAGGGACTTTTAGGACCTACTT 58.500 43.478 0.00 0.00 34.60 2.24
310 1652 4.286291 ACAGGGACTTTTAGGACCTACTTG 59.714 45.833 0.00 0.00 34.60 3.16
311 1653 4.530946 CAGGGACTTTTAGGACCTACTTGA 59.469 45.833 0.00 0.00 34.60 3.02
312 1654 4.531339 AGGGACTTTTAGGACCTACTTGAC 59.469 45.833 0.00 0.00 27.25 3.18
313 1655 4.285260 GGGACTTTTAGGACCTACTTGACA 59.715 45.833 0.00 0.00 0.00 3.58
314 1656 5.045797 GGGACTTTTAGGACCTACTTGACAT 60.046 44.000 0.00 0.00 0.00 3.06
315 1657 6.155737 GGGACTTTTAGGACCTACTTGACATA 59.844 42.308 0.00 0.00 0.00 2.29
317 1659 8.265764 GGACTTTTAGGACCTACTTGACATATT 58.734 37.037 0.00 0.00 0.00 1.28
318 1660 9.668497 GACTTTTAGGACCTACTTGACATATTT 57.332 33.333 0.00 0.00 0.00 1.40
319 1661 9.449719 ACTTTTAGGACCTACTTGACATATTTG 57.550 33.333 0.00 0.00 0.00 2.32
320 1662 9.667107 CTTTTAGGACCTACTTGACATATTTGA 57.333 33.333 0.00 0.00 0.00 2.69
325 1667 9.614792 AGGACCTACTTGACATATTTGAAATAC 57.385 33.333 0.00 0.00 0.00 1.89
326 1668 9.614792 GGACCTACTTGACATATTTGAAATACT 57.385 33.333 0.00 0.00 0.00 2.12
376 1964 8.783833 TCTCTATATAAAATACTACGAGCGGT 57.216 34.615 0.00 0.00 0.00 5.68
379 1967 6.830873 ATATAAAATACTACGAGCGGTCCT 57.169 37.500 9.39 0.00 0.00 3.85
383 1971 1.098050 TACTACGAGCGGTCCTTTCC 58.902 55.000 9.39 0.00 0.00 3.13
389 1977 1.735386 GAGCGGTCCTTTCCCTAAAC 58.265 55.000 2.39 0.00 0.00 2.01
395 1983 4.460034 GCGGTCCTTTCCCTAAACATAAAA 59.540 41.667 0.00 0.00 0.00 1.52
396 1984 5.047872 GCGGTCCTTTCCCTAAACATAAAAA 60.048 40.000 0.00 0.00 0.00 1.94
413 2001 2.912690 AAAATACTAGGAGGCGCCTC 57.087 50.000 42.46 42.46 46.97 4.70
463 2051 8.644374 TTTTAATAATACAAACTGGTCAGGCT 57.356 30.769 2.87 0.00 0.00 4.58
467 2055 0.466189 ACAAACTGGTCAGGCTGGTG 60.466 55.000 15.73 5.14 0.00 4.17
468 2056 0.179020 CAAACTGGTCAGGCTGGTGA 60.179 55.000 15.73 0.00 0.00 4.02
469 2057 0.773644 AAACTGGTCAGGCTGGTGAT 59.226 50.000 15.73 0.00 0.00 3.06
470 2058 1.656587 AACTGGTCAGGCTGGTGATA 58.343 50.000 15.73 0.00 0.00 2.15
472 2060 1.198713 CTGGTCAGGCTGGTGATAGT 58.801 55.000 15.73 0.00 0.00 2.12
473 2061 0.904649 TGGTCAGGCTGGTGATAGTG 59.095 55.000 15.73 0.00 0.00 2.74
474 2062 0.179000 GGTCAGGCTGGTGATAGTGG 59.821 60.000 15.73 0.00 0.00 4.00
475 2063 0.179000 GTCAGGCTGGTGATAGTGGG 59.821 60.000 15.73 0.00 0.00 4.61
476 2064 0.982852 TCAGGCTGGTGATAGTGGGG 60.983 60.000 15.73 0.00 0.00 4.96
477 2065 0.982852 CAGGCTGGTGATAGTGGGGA 60.983 60.000 6.61 0.00 0.00 4.81
478 2066 0.692419 AGGCTGGTGATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
479 2067 0.983378 GGCTGGTGATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
480 2068 1.691482 GGCTGGTGATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
481 2069 2.116238 GCTGGTGATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
482 2070 2.158943 GCTGGTGATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
483 2071 3.375699 CTGGTGATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
484 2072 3.775316 CTGGTGATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
485 2073 4.950361 TGGTGATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
486 2074 4.960469 TGGTGATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
487 2075 5.206587 GGTGATAGTGGGGAGTAACTTAGA 58.793 45.833 0.00 0.00 0.00 2.10
488 2076 5.068855 GGTGATAGTGGGGAGTAACTTAGAC 59.931 48.000 0.00 0.00 0.00 2.59
489 2077 5.892686 GTGATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 0.00 3.24
490 2078 7.059156 GTGATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 0.00 2.59
491 2079 7.229106 GTGATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 0.00 2.57
492 2080 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
493 2081 6.649041 AGTGGGGAGTAACTTAGACTAGTA 57.351 41.667 0.00 0.00 0.00 1.82
494 2082 7.037342 AGTGGGGAGTAACTTAGACTAGTAA 57.963 40.000 0.00 0.00 0.00 2.24
495 2083 6.889177 AGTGGGGAGTAACTTAGACTAGTAAC 59.111 42.308 0.00 0.00 0.00 2.50
496 2084 6.660949 GTGGGGAGTAACTTAGACTAGTAACA 59.339 42.308 0.00 0.00 0.00 2.41
497 2085 7.341512 GTGGGGAGTAACTTAGACTAGTAACAT 59.658 40.741 0.00 0.00 0.00 2.71
498 2086 8.560039 TGGGGAGTAACTTAGACTAGTAACATA 58.440 37.037 0.00 0.00 0.00 2.29
499 2087 8.845227 GGGGAGTAACTTAGACTAGTAACATAC 58.155 40.741 0.00 0.00 0.00 2.39
500 2088 9.401058 GGGAGTAACTTAGACTAGTAACATACA 57.599 37.037 0.00 0.00 0.00 2.29
529 2117 9.519191 TGTTACTAGTGTATGTTACTACCTTCA 57.481 33.333 5.39 0.00 0.00 3.02
533 2121 9.917887 ACTAGTGTATGTTACTACCTTCATAGT 57.082 33.333 0.00 0.00 38.89 2.12
535 2123 8.008513 AGTGTATGTTACTACCTTCATAGTGG 57.991 38.462 0.00 0.00 36.09 4.00
536 2124 7.069578 AGTGTATGTTACTACCTTCATAGTGGG 59.930 40.741 0.00 0.00 36.09 4.61
537 2125 6.899075 TGTATGTTACTACCTTCATAGTGGGT 59.101 38.462 0.00 0.00 36.09 4.51
538 2126 8.060689 TGTATGTTACTACCTTCATAGTGGGTA 58.939 37.037 0.00 0.00 36.09 3.69
543 2131 5.517322 CTACCTTCATAGTGGGTAGTGTC 57.483 47.826 9.46 0.00 44.30 3.67
544 2132 3.786553 ACCTTCATAGTGGGTAGTGTCA 58.213 45.455 0.00 0.00 0.00 3.58
545 2133 4.362677 ACCTTCATAGTGGGTAGTGTCAT 58.637 43.478 0.00 0.00 0.00 3.06
546 2134 5.525484 ACCTTCATAGTGGGTAGTGTCATA 58.475 41.667 0.00 0.00 0.00 2.15
547 2135 5.598830 ACCTTCATAGTGGGTAGTGTCATAG 59.401 44.000 0.00 0.00 0.00 2.23
548 2136 5.011125 CCTTCATAGTGGGTAGTGTCATAGG 59.989 48.000 0.00 0.00 0.00 2.57
549 2137 5.138758 TCATAGTGGGTAGTGTCATAGGT 57.861 43.478 0.00 0.00 0.00 3.08
550 2138 4.893524 TCATAGTGGGTAGTGTCATAGGTG 59.106 45.833 0.00 0.00 0.00 4.00
551 2139 3.185880 AGTGGGTAGTGTCATAGGTGT 57.814 47.619 0.00 0.00 0.00 4.16
552 2140 2.832129 AGTGGGTAGTGTCATAGGTGTG 59.168 50.000 0.00 0.00 0.00 3.82
553 2141 2.093658 GTGGGTAGTGTCATAGGTGTGG 60.094 54.545 0.00 0.00 0.00 4.17
554 2142 2.185387 GGGTAGTGTCATAGGTGTGGT 58.815 52.381 0.00 0.00 0.00 4.16
555 2143 3.245694 TGGGTAGTGTCATAGGTGTGGTA 60.246 47.826 0.00 0.00 0.00 3.25
556 2144 3.770933 GGGTAGTGTCATAGGTGTGGTAA 59.229 47.826 0.00 0.00 0.00 2.85
557 2145 4.382362 GGGTAGTGTCATAGGTGTGGTAAC 60.382 50.000 0.00 0.00 0.00 2.50
576 2164 8.588290 TGGTAACATAGTTGCCTTCATTTATT 57.412 30.769 16.08 0.00 46.17 1.40
577 2165 9.688091 TGGTAACATAGTTGCCTTCATTTATTA 57.312 29.630 16.08 0.00 46.17 0.98
578 2166 9.946165 GGTAACATAGTTGCCTTCATTTATTAC 57.054 33.333 9.36 0.00 0.00 1.89
586 2174 9.515226 AGTTGCCTTCATTTATTACTTTGTAGA 57.485 29.630 0.00 0.00 0.00 2.59
587 2175 9.556030 GTTGCCTTCATTTATTACTTTGTAGAC 57.444 33.333 0.00 0.00 0.00 2.59
588 2176 9.515226 TTGCCTTCATTTATTACTTTGTAGACT 57.485 29.630 0.00 0.00 0.00 3.24
589 2177 9.162764 TGCCTTCATTTATTACTTTGTAGACTC 57.837 33.333 0.00 0.00 0.00 3.36
590 2178 9.162764 GCCTTCATTTATTACTTTGTAGACTCA 57.837 33.333 0.00 0.00 0.00 3.41
601 2189 7.325660 ACTTTGTAGACTCATTATGCATTGG 57.674 36.000 3.54 0.00 0.00 3.16
602 2190 7.112122 ACTTTGTAGACTCATTATGCATTGGA 58.888 34.615 3.54 0.00 0.00 3.53
603 2191 7.611467 ACTTTGTAGACTCATTATGCATTGGAA 59.389 33.333 3.54 0.00 0.00 3.53
604 2192 7.936496 TTGTAGACTCATTATGCATTGGAAA 57.064 32.000 3.54 0.00 0.00 3.13
605 2193 7.320443 TGTAGACTCATTATGCATTGGAAAC 57.680 36.000 3.54 0.00 0.00 2.78
606 2194 5.841957 AGACTCATTATGCATTGGAAACC 57.158 39.130 3.54 0.00 0.00 3.27
607 2195 4.336433 AGACTCATTATGCATTGGAAACCG 59.664 41.667 3.54 0.00 0.00 4.44
608 2196 3.181487 ACTCATTATGCATTGGAAACCGC 60.181 43.478 3.54 0.00 0.00 5.68
609 2197 3.023119 TCATTATGCATTGGAAACCGCT 58.977 40.909 3.54 0.00 0.00 5.52
610 2198 4.203226 TCATTATGCATTGGAAACCGCTA 58.797 39.130 3.54 0.00 0.00 4.26
611 2199 4.826733 TCATTATGCATTGGAAACCGCTAT 59.173 37.500 3.54 0.00 0.00 2.97
612 2200 4.566545 TTATGCATTGGAAACCGCTATG 57.433 40.909 3.54 0.00 0.00 2.23
613 2201 1.832883 TGCATTGGAAACCGCTATGT 58.167 45.000 0.00 0.00 0.00 2.29
614 2202 1.472082 TGCATTGGAAACCGCTATGTG 59.528 47.619 0.00 0.00 0.00 3.21
615 2203 1.742831 GCATTGGAAACCGCTATGTGA 59.257 47.619 0.00 0.00 0.00 3.58
616 2204 2.358898 GCATTGGAAACCGCTATGTGAT 59.641 45.455 0.00 0.00 0.00 3.06
617 2205 3.793129 GCATTGGAAACCGCTATGTGATG 60.793 47.826 0.00 0.00 0.00 3.07
618 2206 2.036958 TGGAAACCGCTATGTGATGG 57.963 50.000 0.00 0.00 0.00 3.51
619 2207 1.280710 TGGAAACCGCTATGTGATGGT 59.719 47.619 0.00 0.00 35.90 3.55
620 2208 2.502130 TGGAAACCGCTATGTGATGGTA 59.498 45.455 0.00 0.00 33.45 3.25
621 2209 3.055021 TGGAAACCGCTATGTGATGGTAA 60.055 43.478 0.00 0.00 33.45 2.85
622 2210 3.311596 GGAAACCGCTATGTGATGGTAAC 59.688 47.826 0.00 0.00 33.45 2.50
651 2239 5.599999 TGTTACTCTATTTGCCTCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
652 2240 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
653 2241 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
654 2242 3.987745 ACTCTATTTGCCTCTCTCCTCA 58.012 45.455 0.00 0.00 0.00 3.86
655 2243 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
656 2244 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
657 2245 6.139671 ACTCTATTTGCCTCTCTCCTCATTA 58.860 40.000 0.00 0.00 0.00 1.90
658 2246 6.613271 ACTCTATTTGCCTCTCTCCTCATTAA 59.387 38.462 0.00 0.00 0.00 1.40
659 2247 6.821388 TCTATTTGCCTCTCTCCTCATTAAC 58.179 40.000 0.00 0.00 0.00 2.01
660 2248 5.707066 ATTTGCCTCTCTCCTCATTAACT 57.293 39.130 0.00 0.00 0.00 2.24
661 2249 6.814954 ATTTGCCTCTCTCCTCATTAACTA 57.185 37.500 0.00 0.00 0.00 2.24
662 2250 5.599999 TTGCCTCTCTCCTCATTAACTAC 57.400 43.478 0.00 0.00 0.00 2.73
663 2251 4.873010 TGCCTCTCTCCTCATTAACTACT 58.127 43.478 0.00 0.00 0.00 2.57
664 2252 5.273208 TGCCTCTCTCCTCATTAACTACTT 58.727 41.667 0.00 0.00 0.00 2.24
665 2253 5.127845 TGCCTCTCTCCTCATTAACTACTTG 59.872 44.000 0.00 0.00 0.00 3.16
666 2254 5.596845 CCTCTCTCCTCATTAACTACTTGC 58.403 45.833 0.00 0.00 0.00 4.01
667 2255 5.452636 CCTCTCTCCTCATTAACTACTTGCC 60.453 48.000 0.00 0.00 0.00 4.52
668 2256 5.023452 TCTCTCCTCATTAACTACTTGCCA 58.977 41.667 0.00 0.00 0.00 4.92
669 2257 5.086104 TCTCCTCATTAACTACTTGCCAC 57.914 43.478 0.00 0.00 0.00 5.01
670 2258 4.530553 TCTCCTCATTAACTACTTGCCACA 59.469 41.667 0.00 0.00 0.00 4.17
671 2259 5.189736 TCTCCTCATTAACTACTTGCCACAT 59.810 40.000 0.00 0.00 0.00 3.21
672 2260 5.428253 TCCTCATTAACTACTTGCCACATC 58.572 41.667 0.00 0.00 0.00 3.06
673 2261 5.045942 TCCTCATTAACTACTTGCCACATCA 60.046 40.000 0.00 0.00 0.00 3.07
674 2262 5.824624 CCTCATTAACTACTTGCCACATCAT 59.175 40.000 0.00 0.00 0.00 2.45
675 2263 6.017605 CCTCATTAACTACTTGCCACATCATC 60.018 42.308 0.00 0.00 0.00 2.92
676 2264 6.413892 TCATTAACTACTTGCCACATCATCA 58.586 36.000 0.00 0.00 0.00 3.07
677 2265 7.056006 TCATTAACTACTTGCCACATCATCAT 58.944 34.615 0.00 0.00 0.00 2.45
678 2266 7.557358 TCATTAACTACTTGCCACATCATCATT 59.443 33.333 0.00 0.00 0.00 2.57
679 2267 7.701539 TTAACTACTTGCCACATCATCATTT 57.298 32.000 0.00 0.00 0.00 2.32
680 2268 6.594788 AACTACTTGCCACATCATCATTTT 57.405 33.333 0.00 0.00 0.00 1.82
681 2269 6.594788 ACTACTTGCCACATCATCATTTTT 57.405 33.333 0.00 0.00 0.00 1.94
682 2270 6.392354 ACTACTTGCCACATCATCATTTTTG 58.608 36.000 0.00 0.00 0.00 2.44
683 2271 3.998341 ACTTGCCACATCATCATTTTTGC 59.002 39.130 0.00 0.00 0.00 3.68
684 2272 3.965379 TGCCACATCATCATTTTTGCT 57.035 38.095 0.00 0.00 0.00 3.91
685 2273 4.274602 TGCCACATCATCATTTTTGCTT 57.725 36.364 0.00 0.00 0.00 3.91
686 2274 5.402997 TGCCACATCATCATTTTTGCTTA 57.597 34.783 0.00 0.00 0.00 3.09
687 2275 5.170021 TGCCACATCATCATTTTTGCTTAC 58.830 37.500 0.00 0.00 0.00 2.34
688 2276 4.266029 GCCACATCATCATTTTTGCTTACG 59.734 41.667 0.00 0.00 0.00 3.18
689 2277 5.401550 CCACATCATCATTTTTGCTTACGT 58.598 37.500 0.00 0.00 0.00 3.57
690 2278 5.286797 CCACATCATCATTTTTGCTTACGTG 59.713 40.000 0.00 0.00 0.00 4.49
691 2279 5.286797 CACATCATCATTTTTGCTTACGTGG 59.713 40.000 0.00 0.00 0.00 4.94
692 2280 3.832276 TCATCATTTTTGCTTACGTGGC 58.168 40.909 0.00 3.00 0.00 5.01
693 2281 3.254411 TCATCATTTTTGCTTACGTGGCA 59.746 39.130 12.76 12.76 37.97 4.92
694 2282 3.932545 TCATTTTTGCTTACGTGGCAT 57.067 38.095 16.44 2.05 39.54 4.40
695 2283 3.832276 TCATTTTTGCTTACGTGGCATC 58.168 40.909 16.44 0.00 39.54 3.91
696 2284 3.505680 TCATTTTTGCTTACGTGGCATCT 59.494 39.130 16.44 2.62 39.54 2.90
697 2285 4.697828 TCATTTTTGCTTACGTGGCATCTA 59.302 37.500 16.44 7.30 39.54 1.98
698 2286 5.356751 TCATTTTTGCTTACGTGGCATCTAT 59.643 36.000 16.44 8.84 39.54 1.98
699 2287 6.540551 TCATTTTTGCTTACGTGGCATCTATA 59.459 34.615 16.44 1.73 39.54 1.31
700 2288 6.935741 TTTTTGCTTACGTGGCATCTATAT 57.064 33.333 16.44 0.00 39.54 0.86
701 2289 6.935741 TTTTGCTTACGTGGCATCTATATT 57.064 33.333 16.44 0.00 39.54 1.28
702 2290 8.439993 TTTTTGCTTACGTGGCATCTATATTA 57.560 30.769 16.44 0.00 39.54 0.98
703 2291 7.416154 TTTGCTTACGTGGCATCTATATTAC 57.584 36.000 16.44 0.00 39.54 1.89
704 2292 6.340962 TGCTTACGTGGCATCTATATTACT 57.659 37.500 12.76 0.00 34.56 2.24
705 2293 7.457024 TGCTTACGTGGCATCTATATTACTA 57.543 36.000 12.76 0.00 34.56 1.82
706 2294 7.310664 TGCTTACGTGGCATCTATATTACTAC 58.689 38.462 12.76 0.00 34.56 2.73
707 2295 6.750963 GCTTACGTGGCATCTATATTACTACC 59.249 42.308 0.00 0.00 0.00 3.18
708 2296 7.362747 GCTTACGTGGCATCTATATTACTACCT 60.363 40.741 0.00 0.00 0.00 3.08
709 2297 9.170734 CTTACGTGGCATCTATATTACTACCTA 57.829 37.037 0.00 0.00 0.00 3.08
710 2298 9.690913 TTACGTGGCATCTATATTACTACCTAT 57.309 33.333 0.00 0.00 0.00 2.57
711 2299 7.997482 ACGTGGCATCTATATTACTACCTATG 58.003 38.462 0.00 0.00 0.00 2.23
712 2300 7.614583 ACGTGGCATCTATATTACTACCTATGT 59.385 37.037 0.00 0.00 0.00 2.29
713 2301 8.467598 CGTGGCATCTATATTACTACCTATGTT 58.532 37.037 0.00 0.00 0.00 2.71
725 2313 8.701908 TTACTACCTATGTTACTCCCACTATG 57.298 38.462 0.00 0.00 0.00 2.23
726 2314 6.919158 ACTACCTATGTTACTCCCACTATGA 58.081 40.000 0.00 0.00 0.00 2.15
727 2315 6.776603 ACTACCTATGTTACTCCCACTATGAC 59.223 42.308 0.00 0.00 0.00 3.06
728 2316 4.900054 ACCTATGTTACTCCCACTATGACC 59.100 45.833 0.00 0.00 0.00 4.02
729 2317 4.899457 CCTATGTTACTCCCACTATGACCA 59.101 45.833 0.00 0.00 0.00 4.02
730 2318 5.011125 CCTATGTTACTCCCACTATGACCAG 59.989 48.000 0.00 0.00 0.00 4.00
731 2319 2.500098 TGTTACTCCCACTATGACCAGC 59.500 50.000 0.00 0.00 0.00 4.85
732 2320 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
733 2321 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
734 2322 0.755686 CTCCCACTATGACCAGCCTC 59.244 60.000 0.00 0.00 0.00 4.70
735 2323 1.043116 TCCCACTATGACCAGCCTCG 61.043 60.000 0.00 0.00 0.00 4.63
746 2334 0.802607 CCAGCCTCGTAGAAAGTCGC 60.803 60.000 0.00 0.00 34.09 5.19
773 2361 2.047560 CCCTCGTGGTTCCCGTTC 60.048 66.667 2.33 0.00 0.00 3.95
784 2372 2.613725 GGTTCCCGTTCGGTGATACTTT 60.614 50.000 10.36 0.00 0.00 2.66
785 2373 3.069289 GTTCCCGTTCGGTGATACTTTT 58.931 45.455 10.36 0.00 0.00 2.27
786 2374 3.405823 TCCCGTTCGGTGATACTTTTT 57.594 42.857 10.36 0.00 0.00 1.94
937 2605 1.048160 CCCAAACACCCTGCCAAGTT 61.048 55.000 0.00 0.00 0.00 2.66
938 2606 0.829990 CCAAACACCCTGCCAAGTTT 59.170 50.000 0.00 0.00 34.78 2.66
939 2607 1.209261 CCAAACACCCTGCCAAGTTTT 59.791 47.619 0.00 0.00 32.34 2.43
940 2608 2.549926 CAAACACCCTGCCAAGTTTTC 58.450 47.619 0.00 0.00 32.34 2.29
1036 2713 4.308458 GGCGGGCCCAAACCAAAC 62.308 66.667 24.92 0.00 0.00 2.93
1040 2717 1.915983 GGGCCCAAACCAAACCAAA 59.084 52.632 19.95 0.00 0.00 3.28
1041 2718 0.476338 GGGCCCAAACCAAACCAAAT 59.524 50.000 19.95 0.00 0.00 2.32
1042 2719 1.544537 GGGCCCAAACCAAACCAAATC 60.545 52.381 19.95 0.00 0.00 2.17
1043 2720 1.141858 GGCCCAAACCAAACCAAATCA 59.858 47.619 0.00 0.00 0.00 2.57
1044 2721 2.422093 GGCCCAAACCAAACCAAATCAA 60.422 45.455 0.00 0.00 0.00 2.57
1045 2722 3.485394 GCCCAAACCAAACCAAATCAAT 58.515 40.909 0.00 0.00 0.00 2.57
1046 2723 3.501828 GCCCAAACCAAACCAAATCAATC 59.498 43.478 0.00 0.00 0.00 2.67
1047 2724 3.745458 CCCAAACCAAACCAAATCAATCG 59.255 43.478 0.00 0.00 0.00 3.34
1048 2725 3.186205 CCAAACCAAACCAAATCAATCGC 59.814 43.478 0.00 0.00 0.00 4.58
1049 2726 2.741759 ACCAAACCAAATCAATCGCC 57.258 45.000 0.00 0.00 0.00 5.54
1413 3092 4.148825 CTCTACGCCGCCAAGCCT 62.149 66.667 0.00 0.00 0.00 4.58
1522 3201 2.862347 CTACCACGTCGGCTTCGTCC 62.862 65.000 0.00 0.00 39.55 4.79
1818 3497 2.822701 GGGATGTTCCGTTCGGCC 60.823 66.667 6.35 0.00 37.43 6.13
2074 3753 3.199508 CCAGATGGAGAACCTGTGAGATT 59.800 47.826 0.00 0.00 37.39 2.40
2075 3754 4.440880 CAGATGGAGAACCTGTGAGATTC 58.559 47.826 0.00 0.00 37.04 2.52
2076 3755 3.131933 AGATGGAGAACCTGTGAGATTCG 59.868 47.826 0.00 0.00 37.04 3.34
2093 3772 0.596577 TCGTCGTAAGCTGCTCACTT 59.403 50.000 1.00 0.00 37.18 3.16
2105 3784 0.036010 GCTCACTTGCCTGCTCCTTA 60.036 55.000 0.00 0.00 0.00 2.69
2120 3799 5.661458 TGCTCCTTACAAATACTAGCTGTC 58.339 41.667 0.00 0.00 0.00 3.51
2124 3803 4.811557 CCTTACAAATACTAGCTGTCCTGC 59.188 45.833 0.00 0.00 0.00 4.85
2245 3946 4.590647 AGTATGGACTGATCTGTGGTATGG 59.409 45.833 10.29 0.00 33.41 2.74
2268 3969 6.659242 TGGAACATAAAGGAAGTTCTCATTCC 59.341 38.462 2.25 7.49 45.56 3.01
2294 4006 5.587289 TGCAAAATCCTCTGTGTTTGTTAC 58.413 37.500 0.00 0.00 34.24 2.50
2295 4007 5.359576 TGCAAAATCCTCTGTGTTTGTTACT 59.640 36.000 0.00 0.00 34.24 2.24
2296 4008 5.915196 GCAAAATCCTCTGTGTTTGTTACTC 59.085 40.000 0.00 0.00 34.24 2.59
2297 4009 6.438763 CAAAATCCTCTGTGTTTGTTACTCC 58.561 40.000 0.00 0.00 0.00 3.85
2298 4010 3.764237 TCCTCTGTGTTTGTTACTCCC 57.236 47.619 0.00 0.00 0.00 4.30
2299 4011 3.314693 TCCTCTGTGTTTGTTACTCCCT 58.685 45.455 0.00 0.00 0.00 4.20
2300 4012 3.323979 TCCTCTGTGTTTGTTACTCCCTC 59.676 47.826 0.00 0.00 0.00 4.30
2301 4013 3.325135 CCTCTGTGTTTGTTACTCCCTCT 59.675 47.826 0.00 0.00 0.00 3.69
2302 4014 4.310769 CTCTGTGTTTGTTACTCCCTCTG 58.689 47.826 0.00 0.00 0.00 3.35
2303 4015 3.709653 TCTGTGTTTGTTACTCCCTCTGT 59.290 43.478 0.00 0.00 0.00 3.41
2304 4016 4.058817 CTGTGTTTGTTACTCCCTCTGTC 58.941 47.826 0.00 0.00 0.00 3.51
2305 4017 3.452990 TGTGTTTGTTACTCCCTCTGTCA 59.547 43.478 0.00 0.00 0.00 3.58
2306 4018 4.080807 TGTGTTTGTTACTCCCTCTGTCAA 60.081 41.667 0.00 0.00 0.00 3.18
2307 4019 4.272748 GTGTTTGTTACTCCCTCTGTCAAC 59.727 45.833 0.00 0.00 0.00 3.18
2308 4020 4.163458 TGTTTGTTACTCCCTCTGTCAACT 59.837 41.667 0.00 0.00 0.00 3.16
2309 4021 5.123936 GTTTGTTACTCCCTCTGTCAACTT 58.876 41.667 0.00 0.00 0.00 2.66
2310 4022 6.126997 TGTTTGTTACTCCCTCTGTCAACTTA 60.127 38.462 0.00 0.00 0.00 2.24
2311 4023 6.681729 TTGTTACTCCCTCTGTCAACTTAT 57.318 37.500 0.00 0.00 0.00 1.73
2312 4024 7.786046 TTGTTACTCCCTCTGTCAACTTATA 57.214 36.000 0.00 0.00 0.00 0.98
2313 4025 7.973048 TGTTACTCCCTCTGTCAACTTATAT 57.027 36.000 0.00 0.00 0.00 0.86
2314 4026 9.483489 TTGTTACTCCCTCTGTCAACTTATATA 57.517 33.333 0.00 0.00 0.00 0.86
2315 4027 9.483489 TGTTACTCCCTCTGTCAACTTATATAA 57.517 33.333 0.00 0.00 0.00 0.98
2316 4028 9.968870 GTTACTCCCTCTGTCAACTTATATAAG 57.031 37.037 18.99 18.99 39.18 1.73
2317 4029 9.931698 TTACTCCCTCTGTCAACTTATATAAGA 57.068 33.333 25.83 4.36 37.08 2.10
2318 4030 8.240267 ACTCCCTCTGTCAACTTATATAAGAC 57.760 38.462 25.83 15.48 37.08 3.01
2319 4031 7.013464 ACTCCCTCTGTCAACTTATATAAGACG 59.987 40.741 25.83 16.40 37.08 4.18
2320 4032 6.832384 TCCCTCTGTCAACTTATATAAGACGT 59.168 38.462 25.83 10.04 37.08 4.34
2321 4033 7.341256 TCCCTCTGTCAACTTATATAAGACGTT 59.659 37.037 25.83 10.40 37.08 3.99
2322 4034 7.980099 CCCTCTGTCAACTTATATAAGACGTTT 59.020 37.037 25.83 9.36 37.08 3.60
2323 4035 9.367444 CCTCTGTCAACTTATATAAGACGTTTT 57.633 33.333 25.83 9.02 37.08 2.43
2325 4037 9.146984 TCTGTCAACTTATATAAGACGTTTTGG 57.853 33.333 25.83 9.26 37.08 3.28
2326 4038 8.836268 TGTCAACTTATATAAGACGTTTTGGT 57.164 30.769 25.83 1.49 37.08 3.67
2327 4039 9.926158 TGTCAACTTATATAAGACGTTTTGGTA 57.074 29.630 25.83 10.77 37.08 3.25
2338 4050 6.687081 AGACGTTTTGGTAGTTCAAATTGA 57.313 33.333 0.00 0.00 36.63 2.57
2339 4051 7.272037 AGACGTTTTGGTAGTTCAAATTGAT 57.728 32.000 0.00 0.00 36.63 2.57
2340 4052 7.712797 AGACGTTTTGGTAGTTCAAATTGATT 58.287 30.769 0.00 0.00 36.63 2.57
2341 4053 8.194769 AGACGTTTTGGTAGTTCAAATTGATTT 58.805 29.630 0.00 0.00 36.63 2.17
2342 4054 9.453325 GACGTTTTGGTAGTTCAAATTGATTTA 57.547 29.630 0.00 0.00 36.63 1.40
2343 4055 9.458374 ACGTTTTGGTAGTTCAAATTGATTTAG 57.542 29.630 0.00 0.00 36.63 1.85
2344 4056 9.458374 CGTTTTGGTAGTTCAAATTGATTTAGT 57.542 29.630 0.00 0.00 36.63 2.24
2346 4058 9.757227 TTTTGGTAGTTCAAATTGATTTAGTGG 57.243 29.630 0.00 0.00 36.63 4.00
2347 4059 8.472007 TTGGTAGTTCAAATTGATTTAGTGGT 57.528 30.769 0.00 0.00 0.00 4.16
2348 4060 9.575868 TTGGTAGTTCAAATTGATTTAGTGGTA 57.424 29.630 0.00 0.00 0.00 3.25
2349 4061 9.575868 TGGTAGTTCAAATTGATTTAGTGGTAA 57.424 29.630 0.00 0.00 0.00 2.85
2353 4065 9.965824 AGTTCAAATTGATTTAGTGGTAAGTTG 57.034 29.630 0.00 0.00 0.00 3.16
2354 4066 9.959749 GTTCAAATTGATTTAGTGGTAAGTTGA 57.040 29.630 0.00 0.00 34.73 3.18
2355 4067 9.959749 TTCAAATTGATTTAGTGGTAAGTTGAC 57.040 29.630 0.00 0.00 35.80 3.18
2356 4068 9.126151 TCAAATTGATTTAGTGGTAAGTTGACA 57.874 29.630 0.00 0.00 32.57 3.58
2357 4069 9.398170 CAAATTGATTTAGTGGTAAGTTGACAG 57.602 33.333 0.00 0.00 30.54 3.51
2358 4070 8.918202 AATTGATTTAGTGGTAAGTTGACAGA 57.082 30.769 0.00 0.00 0.00 3.41
2359 4071 7.962964 TTGATTTAGTGGTAAGTTGACAGAG 57.037 36.000 0.00 0.00 0.00 3.35
2360 4072 6.464222 TGATTTAGTGGTAAGTTGACAGAGG 58.536 40.000 0.00 0.00 0.00 3.69
2363 4075 6.585695 TTAGTGGTAAGTTGACAGAGGTAG 57.414 41.667 0.00 0.00 0.00 3.18
2371 4083 8.747471 GGTAAGTTGACAGAGGTAGTACTTATT 58.253 37.037 0.00 0.00 32.09 1.40
2390 4102 8.451908 ACTTATTATTCTTGGCTCATGGTTAC 57.548 34.615 0.00 0.00 0.00 2.50
2391 4103 8.275040 ACTTATTATTCTTGGCTCATGGTTACT 58.725 33.333 0.00 0.00 0.00 2.24
2392 4104 6.949352 ATTATTCTTGGCTCATGGTTACTG 57.051 37.500 0.00 0.00 0.00 2.74
2393 4105 4.574674 ATTCTTGGCTCATGGTTACTGA 57.425 40.909 0.00 0.00 0.00 3.41
2427 4139 2.409948 AGAGTGGAGGTTAGCATTGC 57.590 50.000 0.00 0.00 0.00 3.56
2519 4231 4.814234 TGTCGTGACACTTAGAAAAGCAAT 59.186 37.500 3.68 0.00 36.21 3.56
2520 4232 5.295787 TGTCGTGACACTTAGAAAAGCAATT 59.704 36.000 3.68 0.00 36.21 2.32
2544 4339 6.939622 TGTGTAGAATTGATGATGACTGTCT 58.060 36.000 9.51 0.00 0.00 3.41
2557 4352 6.997655 TGATGACTGTCTTGACACTTAGAAT 58.002 36.000 9.51 0.00 0.00 2.40
2585 4380 6.851222 ATCGTGCAGGACTATTATTTTGAG 57.149 37.500 11.97 0.00 0.00 3.02
2592 4387 9.383519 TGCAGGACTATTATTTTGAGTTCTTAG 57.616 33.333 0.00 0.00 25.60 2.18
2701 4496 9.197306 TCCTGTTATGCACTTCTATAGTTTAGA 57.803 33.333 0.00 0.00 33.85 2.10
2731 4526 8.239314 AGAACTATCTAACAAATGTGCACAATG 58.761 33.333 25.72 25.77 32.88 2.82
2740 4535 3.815856 ATGTGCACAATGGTTTCAACA 57.184 38.095 25.72 0.00 0.00 3.33
2782 4577 8.594881 TTAGCTTTGTTGTTAGAGAAAGAGAG 57.405 34.615 0.00 0.00 33.16 3.20
2784 4579 5.760743 GCTTTGTTGTTAGAGAAAGAGAGGT 59.239 40.000 0.00 0.00 33.16 3.85
2807 4602 5.915196 GTGTAAAATTTGAGGAAGAGTGCAC 59.085 40.000 9.40 9.40 0.00 4.57
2808 4603 5.592282 TGTAAAATTTGAGGAAGAGTGCACA 59.408 36.000 21.04 0.00 0.00 4.57
2879 4674 8.443937 GTGTTGGAATATGTTTCTGAAGTACTC 58.556 37.037 0.00 0.00 0.00 2.59
2880 4675 7.606456 TGTTGGAATATGTTTCTGAAGTACTCC 59.394 37.037 0.00 0.00 0.00 3.85
2881 4676 6.650120 TGGAATATGTTTCTGAAGTACTCCC 58.350 40.000 0.00 0.00 0.00 4.30
2882 4677 6.443849 TGGAATATGTTTCTGAAGTACTCCCT 59.556 38.462 0.00 0.00 0.00 4.20
2883 4678 6.987404 GGAATATGTTTCTGAAGTACTCCCTC 59.013 42.308 0.00 0.00 0.00 4.30
2884 4679 4.828072 ATGTTTCTGAAGTACTCCCTCC 57.172 45.455 0.00 0.00 0.00 4.30
2885 4680 2.561419 TGTTTCTGAAGTACTCCCTCCG 59.439 50.000 0.00 0.00 0.00 4.63
2886 4681 2.561858 GTTTCTGAAGTACTCCCTCCGT 59.438 50.000 0.00 0.00 0.00 4.69
2887 4682 3.726557 TTCTGAAGTACTCCCTCCGTA 57.273 47.619 0.00 0.00 0.00 4.02
2888 4683 3.726557 TCTGAAGTACTCCCTCCGTAA 57.273 47.619 0.00 0.00 0.00 3.18
2889 4684 4.038271 TCTGAAGTACTCCCTCCGTAAA 57.962 45.455 0.00 0.00 0.00 2.01
2890 4685 3.760684 TCTGAAGTACTCCCTCCGTAAAC 59.239 47.826 0.00 0.00 0.00 2.01
2891 4686 3.762823 CTGAAGTACTCCCTCCGTAAACT 59.237 47.826 0.00 0.00 0.00 2.66
2892 4687 4.922206 TGAAGTACTCCCTCCGTAAACTA 58.078 43.478 0.00 0.00 0.00 2.24
2893 4688 5.324409 TGAAGTACTCCCTCCGTAAACTAA 58.676 41.667 0.00 0.00 0.00 2.24
2894 4689 5.954150 TGAAGTACTCCCTCCGTAAACTAAT 59.046 40.000 0.00 0.00 0.00 1.73
2895 4690 7.118723 TGAAGTACTCCCTCCGTAAACTAATA 58.881 38.462 0.00 0.00 0.00 0.98
2896 4691 7.781693 TGAAGTACTCCCTCCGTAAACTAATAT 59.218 37.037 0.00 0.00 0.00 1.28
2897 4692 9.289782 GAAGTACTCCCTCCGTAAACTAATATA 57.710 37.037 0.00 0.00 0.00 0.86
2898 4693 9.819754 AAGTACTCCCTCCGTAAACTAATATAT 57.180 33.333 0.00 0.00 0.00 0.86
2899 4694 9.819754 AGTACTCCCTCCGTAAACTAATATATT 57.180 33.333 2.97 2.97 0.00 1.28
2936 4731 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
2937 4732 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
2938 4733 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
2939 4734 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
2940 4735 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.885879 CTGTGTGCTGCAATGTGGAT 59.114 50.000 2.77 0.00 0.00 3.41
1 2 1.174078 CCTGTGTGCTGCAATGTGGA 61.174 55.000 2.77 0.00 0.00 4.02
2 3 1.287815 CCTGTGTGCTGCAATGTGG 59.712 57.895 2.77 1.03 0.00 4.17
3 4 1.372499 GCCTGTGTGCTGCAATGTG 60.372 57.895 2.77 0.00 0.00 3.21
4 5 1.393487 TTGCCTGTGTGCTGCAATGT 61.393 50.000 2.77 0.00 39.86 2.71
5 6 1.364536 TTGCCTGTGTGCTGCAATG 59.635 52.632 2.77 0.00 39.86 2.82
6 7 3.859221 TTGCCTGTGTGCTGCAAT 58.141 50.000 2.77 0.00 39.86 3.56
8 9 0.883153 CTAATTGCCTGTGTGCTGCA 59.117 50.000 0.00 0.00 0.00 4.41
9 10 0.457337 GCTAATTGCCTGTGTGCTGC 60.457 55.000 0.00 0.00 35.15 5.25
10 11 1.171308 AGCTAATTGCCTGTGTGCTG 58.829 50.000 0.00 0.00 44.23 4.41
11 12 2.636830 CTAGCTAATTGCCTGTGTGCT 58.363 47.619 0.00 0.00 44.23 4.40
12 13 1.064654 GCTAGCTAATTGCCTGTGTGC 59.935 52.381 7.70 0.00 44.23 4.57
13 14 2.358957 TGCTAGCTAATTGCCTGTGTG 58.641 47.619 17.23 0.00 44.23 3.82
14 15 2.787473 TGCTAGCTAATTGCCTGTGT 57.213 45.000 17.23 0.00 44.23 3.72
15 16 3.628942 TCATTGCTAGCTAATTGCCTGTG 59.371 43.478 17.23 1.08 44.23 3.66
16 17 3.889815 TCATTGCTAGCTAATTGCCTGT 58.110 40.909 17.23 0.00 44.23 4.00
17 18 5.391736 GCTATCATTGCTAGCTAATTGCCTG 60.392 44.000 17.23 2.58 44.23 4.85
18 19 4.699257 GCTATCATTGCTAGCTAATTGCCT 59.301 41.667 17.23 0.00 44.23 4.75
19 20 4.979388 GCTATCATTGCTAGCTAATTGCC 58.021 43.478 17.23 0.00 44.23 4.52
63 64 4.716784 AGGCCTTTATGGAAATTTTCTCCC 59.283 41.667 0.00 0.00 38.35 4.30
73 74 3.845109 AAGGGAAAGGCCTTTATGGAA 57.155 42.857 30.47 0.00 33.57 3.53
79 80 1.919240 CCGTTAAGGGAAAGGCCTTT 58.081 50.000 30.83 30.83 39.60 3.11
94 95 0.110486 AGGACATTGTTGAGGCCGTT 59.890 50.000 0.00 0.00 0.00 4.44
103 104 3.385111 GGATAGACGAGGAGGACATTGTT 59.615 47.826 0.00 0.00 0.00 2.83
129 130 1.337071 CCATACTCGCCGAGCTAAAGA 59.663 52.381 15.20 0.00 32.04 2.52
135 136 2.029666 ATGCCATACTCGCCGAGC 59.970 61.111 15.20 0.46 32.04 5.03
139 140 3.025619 GCACATGCCATACTCGCC 58.974 61.111 0.00 0.00 34.31 5.54
154 155 2.606587 GGCTTGGAAGAGGGAGGCA 61.607 63.158 0.00 0.00 35.07 4.75
161 162 0.174617 GAGGTCGAGGCTTGGAAGAG 59.825 60.000 0.97 0.00 0.00 2.85
176 177 0.475906 AGCTTCTTGCCACTTGAGGT 59.524 50.000 0.00 0.00 44.23 3.85
196 197 1.375396 CACCAATGTCGCCGGAAGA 60.375 57.895 5.05 0.00 0.00 2.87
197 198 2.398554 CCACCAATGTCGCCGGAAG 61.399 63.158 5.05 0.00 0.00 3.46
198 199 2.359354 CCACCAATGTCGCCGGAA 60.359 61.111 5.05 0.00 0.00 4.30
201 202 3.803082 CTGCCACCAATGTCGCCG 61.803 66.667 0.00 0.00 0.00 6.46
202 203 2.672996 ACTGCCACCAATGTCGCC 60.673 61.111 0.00 0.00 0.00 5.54
204 205 1.172180 AACCACTGCCACCAATGTCG 61.172 55.000 0.00 0.00 0.00 4.35
206 207 1.114722 CCAACCACTGCCACCAATGT 61.115 55.000 0.00 0.00 0.00 2.71
207 208 1.114722 ACCAACCACTGCCACCAATG 61.115 55.000 0.00 0.00 0.00 2.82
208 209 0.480690 TACCAACCACTGCCACCAAT 59.519 50.000 0.00 0.00 0.00 3.16
209 210 0.259065 TTACCAACCACTGCCACCAA 59.741 50.000 0.00 0.00 0.00 3.67
216 1283 2.104111 TGGAGTGAGTTACCAACCACTG 59.896 50.000 14.01 0.00 40.53 3.66
227 1294 5.053978 AGAAATTGGAGTTGGAGTGAGTT 57.946 39.130 0.00 0.00 0.00 3.01
229 1296 7.560368 ACTATAGAAATTGGAGTTGGAGTGAG 58.440 38.462 6.78 0.00 0.00 3.51
232 1299 9.232473 GAAAACTATAGAAATTGGAGTTGGAGT 57.768 33.333 6.78 0.00 30.94 3.85
233 1300 8.391106 CGAAAACTATAGAAATTGGAGTTGGAG 58.609 37.037 6.78 0.00 30.94 3.86
245 1312 5.801380 AGGGTGCTTCGAAAACTATAGAAA 58.199 37.500 6.78 0.00 0.00 2.52
251 1318 1.614903 TCGAGGGTGCTTCGAAAACTA 59.385 47.619 0.00 0.00 43.39 2.24
258 1325 1.807573 GCTCTTCGAGGGTGCTTCG 60.808 63.158 0.00 0.00 39.33 3.79
260 1327 0.533032 GTAGCTCTTCGAGGGTGCTT 59.467 55.000 17.45 6.16 35.56 3.91
269 1336 3.430218 CCTGTCTTTTGTGTAGCTCTTCG 59.570 47.826 0.00 0.00 0.00 3.79
272 1339 2.972713 TCCCTGTCTTTTGTGTAGCTCT 59.027 45.455 0.00 0.00 0.00 4.09
274 1341 2.706190 AGTCCCTGTCTTTTGTGTAGCT 59.294 45.455 0.00 0.00 0.00 3.32
275 1342 3.127425 AGTCCCTGTCTTTTGTGTAGC 57.873 47.619 0.00 0.00 0.00 3.58
279 1621 5.008712 GTCCTAAAAGTCCCTGTCTTTTGTG 59.991 44.000 12.06 6.50 42.55 3.33
281 1623 4.519350 GGTCCTAAAAGTCCCTGTCTTTTG 59.481 45.833 12.06 4.68 42.55 2.44
286 1628 4.095211 AGTAGGTCCTAAAAGTCCCTGTC 58.905 47.826 0.00 0.00 0.00 3.51
289 1631 4.531339 GTCAAGTAGGTCCTAAAAGTCCCT 59.469 45.833 0.00 0.00 0.00 4.20
294 1636 9.667107 TCAAATATGTCAAGTAGGTCCTAAAAG 57.333 33.333 0.00 0.00 0.00 2.27
349 1691 8.881743 CCGCTCGTAGTATTTTATATAGAGAGT 58.118 37.037 0.00 0.00 0.00 3.24
350 1692 8.881743 ACCGCTCGTAGTATTTTATATAGAGAG 58.118 37.037 0.00 0.00 0.00 3.20
351 1693 8.783833 ACCGCTCGTAGTATTTTATATAGAGA 57.216 34.615 0.00 0.00 0.00 3.10
352 1694 8.121708 GGACCGCTCGTAGTATTTTATATAGAG 58.878 40.741 0.00 0.00 0.00 2.43
353 1695 7.826252 AGGACCGCTCGTAGTATTTTATATAGA 59.174 37.037 0.00 0.00 0.00 1.98
354 1696 7.983307 AGGACCGCTCGTAGTATTTTATATAG 58.017 38.462 0.00 0.00 0.00 1.31
356 1698 6.830873 AGGACCGCTCGTAGTATTTTATAT 57.169 37.500 0.00 0.00 0.00 0.86
367 1955 0.034186 TAGGGAAAGGACCGCTCGTA 60.034 55.000 0.00 0.00 0.00 3.43
369 1957 0.248289 TTTAGGGAAAGGACCGCTCG 59.752 55.000 0.00 0.00 0.00 5.03
373 1961 6.578163 TTTTTATGTTTAGGGAAAGGACCG 57.422 37.500 0.00 0.00 0.00 4.79
438 2026 8.519526 CAGCCTGACCAGTTTGTATTATTAAAA 58.480 33.333 0.00 0.00 0.00 1.52
441 2029 6.119536 CCAGCCTGACCAGTTTGTATTATTA 58.880 40.000 0.00 0.00 0.00 0.98
445 2033 2.108250 ACCAGCCTGACCAGTTTGTATT 59.892 45.455 0.00 0.00 0.00 1.89
446 2034 1.705186 ACCAGCCTGACCAGTTTGTAT 59.295 47.619 0.00 0.00 0.00 2.29
447 2035 1.136828 ACCAGCCTGACCAGTTTGTA 58.863 50.000 0.00 0.00 0.00 2.41
448 2036 0.466189 CACCAGCCTGACCAGTTTGT 60.466 55.000 0.00 0.00 0.00 2.83
449 2037 0.179020 TCACCAGCCTGACCAGTTTG 60.179 55.000 0.00 0.00 0.00 2.93
450 2038 0.773644 ATCACCAGCCTGACCAGTTT 59.226 50.000 0.00 0.00 0.00 2.66
451 2039 1.556911 CTATCACCAGCCTGACCAGTT 59.443 52.381 0.00 0.00 0.00 3.16
452 2040 1.198713 CTATCACCAGCCTGACCAGT 58.801 55.000 0.00 0.00 0.00 4.00
453 2041 1.134580 CACTATCACCAGCCTGACCAG 60.135 57.143 0.00 0.00 0.00 4.00
454 2042 0.904649 CACTATCACCAGCCTGACCA 59.095 55.000 0.00 0.00 0.00 4.02
455 2043 0.179000 CCACTATCACCAGCCTGACC 59.821 60.000 0.00 0.00 0.00 4.02
456 2044 0.179000 CCCACTATCACCAGCCTGAC 59.821 60.000 0.00 0.00 0.00 3.51
458 2046 0.982852 TCCCCACTATCACCAGCCTG 60.983 60.000 0.00 0.00 0.00 4.85
459 2047 0.692419 CTCCCCACTATCACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
460 2048 0.983378 ACTCCCCACTATCACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
461 2049 1.789523 TACTCCCCACTATCACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
463 2051 3.484953 AGTTACTCCCCACTATCACCA 57.515 47.619 0.00 0.00 0.00 4.17
467 2055 7.289310 ACTAGTCTAAGTTACTCCCCACTATC 58.711 42.308 0.00 0.00 0.00 2.08
468 2056 7.223472 ACTAGTCTAAGTTACTCCCCACTAT 57.777 40.000 0.00 0.00 0.00 2.12
469 2057 6.649041 ACTAGTCTAAGTTACTCCCCACTA 57.351 41.667 0.00 0.00 0.00 2.74
470 2058 5.533333 ACTAGTCTAAGTTACTCCCCACT 57.467 43.478 0.00 0.00 0.00 4.00
472 2060 6.793478 TGTTACTAGTCTAAGTTACTCCCCA 58.207 40.000 0.00 0.00 31.82 4.96
473 2061 7.894753 ATGTTACTAGTCTAAGTTACTCCCC 57.105 40.000 0.00 0.00 31.82 4.81
474 2062 9.401058 TGTATGTTACTAGTCTAAGTTACTCCC 57.599 37.037 0.00 0.00 31.82 4.30
503 2091 9.519191 TGAAGGTAGTAACATACACTAGTAACA 57.481 33.333 0.00 0.00 33.13 2.41
507 2095 9.917887 ACTATGAAGGTAGTAACATACACTAGT 57.082 33.333 0.00 0.00 33.29 2.57
509 2097 9.128404 CCACTATGAAGGTAGTAACATACACTA 57.872 37.037 0.00 0.00 33.29 2.74
510 2098 7.069578 CCCACTATGAAGGTAGTAACATACACT 59.930 40.741 0.00 0.00 33.29 3.55
511 2099 7.147776 ACCCACTATGAAGGTAGTAACATACAC 60.148 40.741 0.00 0.00 33.29 2.90
512 2100 6.899075 ACCCACTATGAAGGTAGTAACATACA 59.101 38.462 0.00 0.00 33.29 2.29
513 2101 7.357429 ACCCACTATGAAGGTAGTAACATAC 57.643 40.000 0.00 0.00 33.29 2.39
514 2102 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
515 2103 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
522 2110 4.938028 TGACACTACCCACTATGAAGGTA 58.062 43.478 0.00 0.00 35.02 3.08
523 2111 3.786553 TGACACTACCCACTATGAAGGT 58.213 45.455 0.00 0.00 37.69 3.50
524 2112 5.011125 CCTATGACACTACCCACTATGAAGG 59.989 48.000 0.00 0.00 0.00 3.46
525 2113 5.598830 ACCTATGACACTACCCACTATGAAG 59.401 44.000 0.00 0.00 0.00 3.02
526 2114 5.362717 CACCTATGACACTACCCACTATGAA 59.637 44.000 0.00 0.00 0.00 2.57
527 2115 4.893524 CACCTATGACACTACCCACTATGA 59.106 45.833 0.00 0.00 0.00 2.15
528 2116 4.649674 ACACCTATGACACTACCCACTATG 59.350 45.833 0.00 0.00 0.00 2.23
529 2117 4.649674 CACACCTATGACACTACCCACTAT 59.350 45.833 0.00 0.00 0.00 2.12
530 2118 4.021229 CACACCTATGACACTACCCACTA 58.979 47.826 0.00 0.00 0.00 2.74
531 2119 2.832129 CACACCTATGACACTACCCACT 59.168 50.000 0.00 0.00 0.00 4.00
532 2120 2.093658 CCACACCTATGACACTACCCAC 60.094 54.545 0.00 0.00 0.00 4.61
533 2121 2.184533 CCACACCTATGACACTACCCA 58.815 52.381 0.00 0.00 0.00 4.51
534 2122 2.185387 ACCACACCTATGACACTACCC 58.815 52.381 0.00 0.00 0.00 3.69
535 2123 4.221262 TGTTACCACACCTATGACACTACC 59.779 45.833 0.00 0.00 0.00 3.18
536 2124 5.395682 TGTTACCACACCTATGACACTAC 57.604 43.478 0.00 0.00 0.00 2.73
537 2125 6.893554 ACTATGTTACCACACCTATGACACTA 59.106 38.462 0.00 0.00 35.03 2.74
538 2126 5.720041 ACTATGTTACCACACCTATGACACT 59.280 40.000 0.00 0.00 35.03 3.55
539 2127 5.974108 ACTATGTTACCACACCTATGACAC 58.026 41.667 0.00 0.00 35.03 3.67
540 2128 6.403049 CAACTATGTTACCACACCTATGACA 58.597 40.000 0.00 0.00 35.03 3.58
541 2129 5.293569 GCAACTATGTTACCACACCTATGAC 59.706 44.000 0.00 0.00 35.03 3.06
542 2130 5.424757 GCAACTATGTTACCACACCTATGA 58.575 41.667 0.00 0.00 35.03 2.15
543 2131 4.574828 GGCAACTATGTTACCACACCTATG 59.425 45.833 0.00 0.00 35.03 2.23
544 2132 4.777463 GGCAACTATGTTACCACACCTAT 58.223 43.478 0.00 0.00 35.03 2.57
545 2133 4.210724 GGCAACTATGTTACCACACCTA 57.789 45.455 0.00 0.00 35.03 3.08
546 2134 3.067684 GGCAACTATGTTACCACACCT 57.932 47.619 0.00 0.00 35.03 4.00
561 2149 9.556030 GTCTACAAAGTAATAAATGAAGGCAAC 57.444 33.333 0.00 0.00 0.00 4.17
562 2150 9.515226 AGTCTACAAAGTAATAAATGAAGGCAA 57.485 29.630 0.00 0.00 0.00 4.52
563 2151 9.162764 GAGTCTACAAAGTAATAAATGAAGGCA 57.837 33.333 0.00 0.00 0.00 4.75
564 2152 9.162764 TGAGTCTACAAAGTAATAAATGAAGGC 57.837 33.333 0.00 0.00 0.00 4.35
575 2163 8.892723 CCAATGCATAATGAGTCTACAAAGTAA 58.107 33.333 0.00 0.00 0.00 2.24
576 2164 8.264347 TCCAATGCATAATGAGTCTACAAAGTA 58.736 33.333 0.00 0.00 0.00 2.24
577 2165 7.112122 TCCAATGCATAATGAGTCTACAAAGT 58.888 34.615 0.00 0.00 0.00 2.66
578 2166 7.558161 TCCAATGCATAATGAGTCTACAAAG 57.442 36.000 0.00 0.00 0.00 2.77
579 2167 7.936496 TTCCAATGCATAATGAGTCTACAAA 57.064 32.000 0.00 0.00 0.00 2.83
580 2168 7.148086 GGTTTCCAATGCATAATGAGTCTACAA 60.148 37.037 0.00 0.00 0.00 2.41
581 2169 6.318648 GGTTTCCAATGCATAATGAGTCTACA 59.681 38.462 0.00 0.00 0.00 2.74
582 2170 6.511767 CGGTTTCCAATGCATAATGAGTCTAC 60.512 42.308 0.00 0.00 0.00 2.59
583 2171 5.527214 CGGTTTCCAATGCATAATGAGTCTA 59.473 40.000 0.00 0.00 0.00 2.59
584 2172 4.336433 CGGTTTCCAATGCATAATGAGTCT 59.664 41.667 0.00 0.00 0.00 3.24
585 2173 4.601019 CGGTTTCCAATGCATAATGAGTC 58.399 43.478 0.00 0.00 0.00 3.36
586 2174 3.181487 GCGGTTTCCAATGCATAATGAGT 60.181 43.478 0.00 0.00 0.00 3.41
587 2175 3.067180 AGCGGTTTCCAATGCATAATGAG 59.933 43.478 0.00 0.00 0.00 2.90
588 2176 3.023119 AGCGGTTTCCAATGCATAATGA 58.977 40.909 0.00 0.00 0.00 2.57
589 2177 3.441496 AGCGGTTTCCAATGCATAATG 57.559 42.857 0.00 0.00 0.00 1.90
590 2178 4.584325 ACATAGCGGTTTCCAATGCATAAT 59.416 37.500 0.00 0.00 0.00 1.28
591 2179 3.951037 ACATAGCGGTTTCCAATGCATAA 59.049 39.130 0.00 0.00 0.00 1.90
592 2180 3.314913 CACATAGCGGTTTCCAATGCATA 59.685 43.478 0.00 0.00 0.00 3.14
593 2181 2.099592 CACATAGCGGTTTCCAATGCAT 59.900 45.455 0.00 0.00 0.00 3.96
594 2182 1.472082 CACATAGCGGTTTCCAATGCA 59.528 47.619 0.00 0.00 0.00 3.96
595 2183 1.742831 TCACATAGCGGTTTCCAATGC 59.257 47.619 0.00 0.00 0.00 3.56
596 2184 3.243168 CCATCACATAGCGGTTTCCAATG 60.243 47.826 0.00 0.00 0.00 2.82
597 2185 2.951642 CCATCACATAGCGGTTTCCAAT 59.048 45.455 0.00 0.00 0.00 3.16
598 2186 2.290641 ACCATCACATAGCGGTTTCCAA 60.291 45.455 0.00 0.00 0.00 3.53
599 2187 1.280710 ACCATCACATAGCGGTTTCCA 59.719 47.619 0.00 0.00 0.00 3.53
600 2188 2.038387 ACCATCACATAGCGGTTTCC 57.962 50.000 0.00 0.00 0.00 3.13
601 2189 3.936453 TGTTACCATCACATAGCGGTTTC 59.064 43.478 0.00 0.00 32.81 2.78
602 2190 3.945346 TGTTACCATCACATAGCGGTTT 58.055 40.909 0.00 0.00 32.81 3.27
603 2191 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
604 2192 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
605 2193 7.549134 ACATAATATGTTACCATCACATAGCGG 59.451 37.037 0.00 0.00 41.63 5.52
606 2194 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
625 2213 8.371699 GGAGAGAGGCAAATAGAGTAACATAAT 58.628 37.037 0.00 0.00 0.00 1.28
626 2214 7.565398 AGGAGAGAGGCAAATAGAGTAACATAA 59.435 37.037 0.00 0.00 0.00 1.90
627 2215 7.069986 AGGAGAGAGGCAAATAGAGTAACATA 58.930 38.462 0.00 0.00 0.00 2.29
628 2216 5.902431 AGGAGAGAGGCAAATAGAGTAACAT 59.098 40.000 0.00 0.00 0.00 2.71
629 2217 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
630 2218 5.361285 TGAGGAGAGAGGCAAATAGAGTAAC 59.639 44.000 0.00 0.00 0.00 2.50
631 2219 5.519808 TGAGGAGAGAGGCAAATAGAGTAA 58.480 41.667 0.00 0.00 0.00 2.24
632 2220 5.130705 TGAGGAGAGAGGCAAATAGAGTA 57.869 43.478 0.00 0.00 0.00 2.59
633 2221 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
634 2222 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
635 2223 6.613271 AGTTAATGAGGAGAGAGGCAAATAGA 59.387 38.462 0.00 0.00 0.00 1.98
636 2224 6.825610 AGTTAATGAGGAGAGAGGCAAATAG 58.174 40.000 0.00 0.00 0.00 1.73
637 2225 6.814954 AGTTAATGAGGAGAGAGGCAAATA 57.185 37.500 0.00 0.00 0.00 1.40
638 2226 5.707066 AGTTAATGAGGAGAGAGGCAAAT 57.293 39.130 0.00 0.00 0.00 2.32
639 2227 5.721960 AGTAGTTAATGAGGAGAGAGGCAAA 59.278 40.000 0.00 0.00 0.00 3.68
640 2228 5.273208 AGTAGTTAATGAGGAGAGAGGCAA 58.727 41.667 0.00 0.00 0.00 4.52
641 2229 4.873010 AGTAGTTAATGAGGAGAGAGGCA 58.127 43.478 0.00 0.00 0.00 4.75
642 2230 5.596845 CAAGTAGTTAATGAGGAGAGAGGC 58.403 45.833 0.00 0.00 0.00 4.70
643 2231 5.452636 GGCAAGTAGTTAATGAGGAGAGAGG 60.453 48.000 0.00 0.00 0.00 3.69
644 2232 5.127845 TGGCAAGTAGTTAATGAGGAGAGAG 59.872 44.000 0.00 0.00 0.00 3.20
645 2233 5.023452 TGGCAAGTAGTTAATGAGGAGAGA 58.977 41.667 0.00 0.00 0.00 3.10
646 2234 5.112686 GTGGCAAGTAGTTAATGAGGAGAG 58.887 45.833 0.00 0.00 0.00 3.20
647 2235 4.530553 TGTGGCAAGTAGTTAATGAGGAGA 59.469 41.667 0.00 0.00 0.00 3.71
648 2236 4.832248 TGTGGCAAGTAGTTAATGAGGAG 58.168 43.478 0.00 0.00 0.00 3.69
649 2237 4.901197 TGTGGCAAGTAGTTAATGAGGA 57.099 40.909 0.00 0.00 0.00 3.71
650 2238 5.185454 TGATGTGGCAAGTAGTTAATGAGG 58.815 41.667 0.00 0.00 0.00 3.86
651 2239 6.539826 TGATGATGTGGCAAGTAGTTAATGAG 59.460 38.462 0.00 0.00 0.00 2.90
652 2240 6.413892 TGATGATGTGGCAAGTAGTTAATGA 58.586 36.000 0.00 0.00 0.00 2.57
653 2241 6.682423 TGATGATGTGGCAAGTAGTTAATG 57.318 37.500 0.00 0.00 0.00 1.90
654 2242 7.886629 AATGATGATGTGGCAAGTAGTTAAT 57.113 32.000 0.00 0.00 0.00 1.40
655 2243 7.701539 AAATGATGATGTGGCAAGTAGTTAA 57.298 32.000 0.00 0.00 0.00 2.01
656 2244 7.701539 AAAATGATGATGTGGCAAGTAGTTA 57.298 32.000 0.00 0.00 0.00 2.24
657 2245 6.594788 AAAATGATGATGTGGCAAGTAGTT 57.405 33.333 0.00 0.00 0.00 2.24
658 2246 6.392354 CAAAAATGATGATGTGGCAAGTAGT 58.608 36.000 0.00 0.00 0.00 2.73
659 2247 5.290158 GCAAAAATGATGATGTGGCAAGTAG 59.710 40.000 0.00 0.00 0.00 2.57
660 2248 5.047164 AGCAAAAATGATGATGTGGCAAGTA 60.047 36.000 0.00 0.00 0.00 2.24
661 2249 3.998341 GCAAAAATGATGATGTGGCAAGT 59.002 39.130 0.00 0.00 0.00 3.16
662 2250 4.250464 AGCAAAAATGATGATGTGGCAAG 58.750 39.130 0.00 0.00 0.00 4.01
663 2251 4.274602 AGCAAAAATGATGATGTGGCAA 57.725 36.364 0.00 0.00 0.00 4.52
664 2252 3.965379 AGCAAAAATGATGATGTGGCA 57.035 38.095 0.00 0.00 0.00 4.92
665 2253 4.266029 CGTAAGCAAAAATGATGATGTGGC 59.734 41.667 0.00 0.00 0.00 5.01
666 2254 5.286797 CACGTAAGCAAAAATGATGATGTGG 59.713 40.000 0.00 0.00 45.62 4.17
667 2255 5.286797 CCACGTAAGCAAAAATGATGATGTG 59.713 40.000 0.00 0.00 45.62 3.21
668 2256 5.401550 CCACGTAAGCAAAAATGATGATGT 58.598 37.500 0.00 0.00 45.62 3.06
669 2257 4.266029 GCCACGTAAGCAAAAATGATGATG 59.734 41.667 4.95 0.00 45.62 3.07
670 2258 4.082300 TGCCACGTAAGCAAAAATGATGAT 60.082 37.500 9.80 0.00 45.62 2.45
671 2259 3.254411 TGCCACGTAAGCAAAAATGATGA 59.746 39.130 9.80 0.00 45.62 2.92
672 2260 3.573598 TGCCACGTAAGCAAAAATGATG 58.426 40.909 9.80 0.00 45.62 3.07
673 2261 3.932545 TGCCACGTAAGCAAAAATGAT 57.067 38.095 9.80 0.00 45.62 2.45
674 2262 3.505680 AGATGCCACGTAAGCAAAAATGA 59.494 39.130 15.48 0.00 44.83 2.57
675 2263 3.836949 AGATGCCACGTAAGCAAAAATG 58.163 40.909 15.48 0.00 44.83 2.32
676 2264 5.835113 ATAGATGCCACGTAAGCAAAAAT 57.165 34.783 15.48 7.21 44.83 1.82
677 2265 6.935741 ATATAGATGCCACGTAAGCAAAAA 57.064 33.333 15.48 5.41 44.83 1.94
678 2266 6.935741 AATATAGATGCCACGTAAGCAAAA 57.064 33.333 15.48 5.72 44.83 2.44
679 2267 7.214381 AGTAATATAGATGCCACGTAAGCAAA 58.786 34.615 15.48 6.03 44.83 3.68
680 2268 6.755206 AGTAATATAGATGCCACGTAAGCAA 58.245 36.000 15.48 1.33 44.83 3.91
681 2269 6.340962 AGTAATATAGATGCCACGTAAGCA 57.659 37.500 14.08 14.08 45.94 3.91
682 2270 6.750963 GGTAGTAATATAGATGCCACGTAAGC 59.249 42.308 2.88 2.88 45.62 3.09
684 2272 9.690913 ATAGGTAGTAATATAGATGCCACGTAA 57.309 33.333 0.00 0.00 0.00 3.18
685 2273 9.117183 CATAGGTAGTAATATAGATGCCACGTA 57.883 37.037 0.00 0.00 0.00 3.57
686 2274 7.614583 ACATAGGTAGTAATATAGATGCCACGT 59.385 37.037 0.00 0.00 0.00 4.49
687 2275 7.997482 ACATAGGTAGTAATATAGATGCCACG 58.003 38.462 0.00 0.00 0.00 4.94
699 2287 9.310449 CATAGTGGGAGTAACATAGGTAGTAAT 57.690 37.037 0.00 0.00 0.00 1.89
700 2288 8.505246 TCATAGTGGGAGTAACATAGGTAGTAA 58.495 37.037 0.00 0.00 0.00 2.24
701 2289 7.941238 GTCATAGTGGGAGTAACATAGGTAGTA 59.059 40.741 0.00 0.00 0.00 1.82
702 2290 6.776603 GTCATAGTGGGAGTAACATAGGTAGT 59.223 42.308 0.00 0.00 0.00 2.73
703 2291 6.208994 GGTCATAGTGGGAGTAACATAGGTAG 59.791 46.154 0.00 0.00 0.00 3.18
704 2292 6.073314 GGTCATAGTGGGAGTAACATAGGTA 58.927 44.000 0.00 0.00 0.00 3.08
705 2293 4.900054 GGTCATAGTGGGAGTAACATAGGT 59.100 45.833 0.00 0.00 0.00 3.08
706 2294 4.899457 TGGTCATAGTGGGAGTAACATAGG 59.101 45.833 0.00 0.00 0.00 2.57
707 2295 5.509840 GCTGGTCATAGTGGGAGTAACATAG 60.510 48.000 0.00 0.00 0.00 2.23
708 2296 4.344102 GCTGGTCATAGTGGGAGTAACATA 59.656 45.833 0.00 0.00 0.00 2.29
709 2297 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
710 2298 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
711 2299 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
712 2300 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
713 2301 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
714 2302 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
715 2303 0.755686 GAGGCTGGTCATAGTGGGAG 59.244 60.000 0.00 0.00 0.00 4.30
716 2304 1.043116 CGAGGCTGGTCATAGTGGGA 61.043 60.000 0.00 0.00 0.00 4.37
717 2305 1.330655 ACGAGGCTGGTCATAGTGGG 61.331 60.000 0.00 0.00 0.00 4.61
718 2306 1.338337 CTACGAGGCTGGTCATAGTGG 59.662 57.143 5.11 0.00 0.00 4.00
719 2307 2.298610 TCTACGAGGCTGGTCATAGTG 58.701 52.381 5.11 0.00 0.00 2.74
720 2308 2.730934 TCTACGAGGCTGGTCATAGT 57.269 50.000 5.11 0.00 0.00 2.12
721 2309 3.381908 ACTTTCTACGAGGCTGGTCATAG 59.618 47.826 5.11 0.00 0.00 2.23
722 2310 3.362706 ACTTTCTACGAGGCTGGTCATA 58.637 45.455 5.11 0.00 0.00 2.15
723 2311 2.166664 GACTTTCTACGAGGCTGGTCAT 59.833 50.000 5.11 0.00 0.00 3.06
724 2312 1.544691 GACTTTCTACGAGGCTGGTCA 59.455 52.381 5.11 0.00 0.00 4.02
725 2313 1.467713 CGACTTTCTACGAGGCTGGTC 60.468 57.143 5.11 0.00 0.00 4.02
726 2314 0.526662 CGACTTTCTACGAGGCTGGT 59.473 55.000 7.47 7.47 0.00 4.00
727 2315 0.802607 GCGACTTTCTACGAGGCTGG 60.803 60.000 0.00 0.00 0.00 4.85
728 2316 0.171455 AGCGACTTTCTACGAGGCTG 59.829 55.000 0.00 0.00 0.00 4.85
729 2317 1.671845 CTAGCGACTTTCTACGAGGCT 59.328 52.381 0.00 0.00 0.00 4.58
730 2318 1.669779 TCTAGCGACTTTCTACGAGGC 59.330 52.381 0.00 0.00 0.00 4.70
731 2319 2.286536 GCTCTAGCGACTTTCTACGAGG 60.287 54.545 0.00 0.00 0.00 4.63
732 2320 2.976729 GCTCTAGCGACTTTCTACGAG 58.023 52.381 0.00 0.00 0.00 4.18
746 2334 3.905678 CACGAGGGGGCGCTCTAG 61.906 72.222 7.48 6.10 33.86 2.43
784 2372 2.828933 GCCGCGGCCAAAAATAAAA 58.171 47.368 39.89 0.00 34.56 1.52
785 2373 4.580835 GCCGCGGCCAAAAATAAA 57.419 50.000 39.89 0.00 34.56 1.40
937 2605 2.850568 GGGAAGGGATAGGTGGAAGAAA 59.149 50.000 0.00 0.00 0.00 2.52
938 2606 2.488836 GGGAAGGGATAGGTGGAAGAA 58.511 52.381 0.00 0.00 0.00 2.52
939 2607 1.345112 GGGGAAGGGATAGGTGGAAGA 60.345 57.143 0.00 0.00 0.00 2.87
940 2608 1.141185 GGGGAAGGGATAGGTGGAAG 58.859 60.000 0.00 0.00 0.00 3.46
1036 2713 1.356624 GGCGAGGCGATTGATTTGG 59.643 57.895 0.00 0.00 0.00 3.28
1040 2717 2.771763 GATCCGGCGAGGCGATTGAT 62.772 60.000 20.49 13.75 40.77 2.57
1041 2718 3.499929 GATCCGGCGAGGCGATTGA 62.500 63.158 20.49 9.54 40.77 2.57
1042 2719 3.038417 GATCCGGCGAGGCGATTG 61.038 66.667 20.49 4.12 40.77 2.67
1043 2720 4.301027 GGATCCGGCGAGGCGATT 62.301 66.667 20.49 7.00 40.77 3.34
1269 2948 2.181021 GCGGTGTAGTCGGAGGTG 59.819 66.667 0.00 0.00 0.00 4.00
1413 3092 3.157252 GAGGAGGCGATGGAGGCA 61.157 66.667 0.00 0.00 39.37 4.75
1522 3201 1.032657 ATGAGGAGGACGACGGTGAG 61.033 60.000 0.00 0.00 0.00 3.51
1581 3260 1.764454 GAGGAGGAAGGAGAGGGGC 60.764 68.421 0.00 0.00 0.00 5.80
2031 3710 0.036483 TATTGCTCTTGAGCGGCACA 60.036 50.000 16.48 0.00 35.62 4.57
2074 3753 0.596577 AAGTGAGCAGCTTACGACGA 59.403 50.000 11.46 0.00 0.00 4.20
2075 3754 0.710567 CAAGTGAGCAGCTTACGACG 59.289 55.000 11.46 0.00 0.00 5.12
2076 3755 0.440371 GCAAGTGAGCAGCTTACGAC 59.560 55.000 11.46 2.12 0.00 4.34
2093 3772 4.683400 GCTAGTATTTGTAAGGAGCAGGCA 60.683 45.833 0.00 0.00 0.00 4.75
2105 3784 3.369892 CCAGCAGGACAGCTAGTATTTGT 60.370 47.826 0.00 0.00 44.54 2.83
2120 3799 2.996249 TTAGAGCAAGATCCAGCAGG 57.004 50.000 9.36 0.00 0.00 4.85
2151 3830 1.247567 ACAAGAAATCCTGGCAACGG 58.752 50.000 0.00 0.00 45.15 4.44
2245 3946 6.675728 GCGGAATGAGAACTTCCTTTATGTTC 60.676 42.308 0.00 0.00 40.07 3.18
2268 3969 0.877071 ACACAGAGGATTTTGCAGCG 59.123 50.000 0.00 0.00 0.00 5.18
2294 4006 7.013464 ACGTCTTATATAAGTTGACAGAGGGAG 59.987 40.741 19.58 2.84 34.93 4.30
2295 4007 6.832384 ACGTCTTATATAAGTTGACAGAGGGA 59.168 38.462 19.58 0.00 34.93 4.20
2296 4008 7.040473 ACGTCTTATATAAGTTGACAGAGGG 57.960 40.000 19.58 3.95 34.93 4.30
2297 4009 8.928270 AAACGTCTTATATAAGTTGACAGAGG 57.072 34.615 19.58 8.80 34.93 3.69
2299 4011 9.146984 CCAAAACGTCTTATATAAGTTGACAGA 57.853 33.333 19.58 0.00 34.93 3.41
2300 4012 8.932791 ACCAAAACGTCTTATATAAGTTGACAG 58.067 33.333 19.58 10.94 34.93 3.51
2301 4013 8.836268 ACCAAAACGTCTTATATAAGTTGACA 57.164 30.769 19.58 0.21 34.93 3.58
2312 4024 8.842280 TCAATTTGAACTACCAAAACGTCTTAT 58.158 29.630 0.00 0.00 39.20 1.73
2313 4025 8.211116 TCAATTTGAACTACCAAAACGTCTTA 57.789 30.769 0.00 0.00 39.20 2.10
2314 4026 7.090953 TCAATTTGAACTACCAAAACGTCTT 57.909 32.000 0.00 0.00 39.20 3.01
2315 4027 6.687081 TCAATTTGAACTACCAAAACGTCT 57.313 33.333 0.00 0.00 39.20 4.18
2316 4028 7.924103 AATCAATTTGAACTACCAAAACGTC 57.076 32.000 2.68 0.00 39.20 4.34
2317 4029 9.458374 CTAAATCAATTTGAACTACCAAAACGT 57.542 29.630 2.68 0.00 39.20 3.99
2318 4030 9.458374 ACTAAATCAATTTGAACTACCAAAACG 57.542 29.630 2.68 0.00 39.20 3.60
2320 4032 9.757227 CCACTAAATCAATTTGAACTACCAAAA 57.243 29.630 2.68 0.00 39.20 2.44
2321 4033 8.919145 ACCACTAAATCAATTTGAACTACCAAA 58.081 29.630 2.68 0.00 39.93 3.28
2322 4034 8.472007 ACCACTAAATCAATTTGAACTACCAA 57.528 30.769 2.68 0.00 0.00 3.67
2323 4035 9.575868 TTACCACTAAATCAATTTGAACTACCA 57.424 29.630 2.68 0.00 0.00 3.25
2327 4039 9.965824 CAACTTACCACTAAATCAATTTGAACT 57.034 29.630 2.68 0.00 0.00 3.01
2328 4040 9.959749 TCAACTTACCACTAAATCAATTTGAAC 57.040 29.630 2.68 0.00 0.00 3.18
2329 4041 9.959749 GTCAACTTACCACTAAATCAATTTGAA 57.040 29.630 2.68 0.00 0.00 2.69
2330 4042 9.126151 TGTCAACTTACCACTAAATCAATTTGA 57.874 29.630 0.75 0.75 0.00 2.69
2331 4043 9.398170 CTGTCAACTTACCACTAAATCAATTTG 57.602 33.333 0.00 0.00 0.00 2.32
2332 4044 9.349713 TCTGTCAACTTACCACTAAATCAATTT 57.650 29.630 0.00 0.00 0.00 1.82
2333 4045 8.918202 TCTGTCAACTTACCACTAAATCAATT 57.082 30.769 0.00 0.00 0.00 2.32
2334 4046 7.607991 CCTCTGTCAACTTACCACTAAATCAAT 59.392 37.037 0.00 0.00 0.00 2.57
2335 4047 6.934645 CCTCTGTCAACTTACCACTAAATCAA 59.065 38.462 0.00 0.00 0.00 2.57
2336 4048 6.042781 ACCTCTGTCAACTTACCACTAAATCA 59.957 38.462 0.00 0.00 0.00 2.57
2337 4049 6.465084 ACCTCTGTCAACTTACCACTAAATC 58.535 40.000 0.00 0.00 0.00 2.17
2338 4050 6.435292 ACCTCTGTCAACTTACCACTAAAT 57.565 37.500 0.00 0.00 0.00 1.40
2339 4051 5.881923 ACCTCTGTCAACTTACCACTAAA 57.118 39.130 0.00 0.00 0.00 1.85
2340 4052 6.073314 ACTACCTCTGTCAACTTACCACTAA 58.927 40.000 0.00 0.00 0.00 2.24
2341 4053 5.638133 ACTACCTCTGTCAACTTACCACTA 58.362 41.667 0.00 0.00 0.00 2.74
2342 4054 4.481072 ACTACCTCTGTCAACTTACCACT 58.519 43.478 0.00 0.00 0.00 4.00
2343 4055 4.868314 ACTACCTCTGTCAACTTACCAC 57.132 45.455 0.00 0.00 0.00 4.16
2344 4056 5.638133 AGTACTACCTCTGTCAACTTACCA 58.362 41.667 0.00 0.00 0.00 3.25
2345 4057 6.587206 AAGTACTACCTCTGTCAACTTACC 57.413 41.667 0.00 0.00 0.00 2.85
2353 4065 9.968870 CCAAGAATAATAAGTACTACCTCTGTC 57.031 37.037 0.00 0.00 0.00 3.51
2354 4066 8.422566 GCCAAGAATAATAAGTACTACCTCTGT 58.577 37.037 0.00 0.00 0.00 3.41
2355 4067 8.643324 AGCCAAGAATAATAAGTACTACCTCTG 58.357 37.037 0.00 0.00 0.00 3.35
2356 4068 8.785184 AGCCAAGAATAATAAGTACTACCTCT 57.215 34.615 0.00 0.00 0.00 3.69
2357 4069 8.639761 TGAGCCAAGAATAATAAGTACTACCTC 58.360 37.037 0.00 0.00 0.00 3.85
2358 4070 8.548880 TGAGCCAAGAATAATAAGTACTACCT 57.451 34.615 0.00 0.00 0.00 3.08
2359 4071 9.209175 CATGAGCCAAGAATAATAAGTACTACC 57.791 37.037 0.00 0.00 0.00 3.18
2360 4072 9.209175 CCATGAGCCAAGAATAATAAGTACTAC 57.791 37.037 0.00 0.00 0.00 2.73
2363 4075 8.451908 AACCATGAGCCAAGAATAATAAGTAC 57.548 34.615 0.00 0.00 0.00 2.73
2371 4083 5.692115 TCAGTAACCATGAGCCAAGAATA 57.308 39.130 0.00 0.00 0.00 1.75
2390 4102 7.331026 TCCACTCTTACCACTAAATCAATCAG 58.669 38.462 0.00 0.00 0.00 2.90
2391 4103 7.252612 TCCACTCTTACCACTAAATCAATCA 57.747 36.000 0.00 0.00 0.00 2.57
2392 4104 6.763610 CCTCCACTCTTACCACTAAATCAATC 59.236 42.308 0.00 0.00 0.00 2.67
2393 4105 6.215636 ACCTCCACTCTTACCACTAAATCAAT 59.784 38.462 0.00 0.00 0.00 2.57
2455 4167 7.544622 CATCAACAATCATGAACTCCTCAAAT 58.455 34.615 0.00 0.00 37.67 2.32
2519 4231 7.389232 AGACAGTCATCATCAATTCTACACAA 58.611 34.615 2.66 0.00 0.00 3.33
2520 4232 6.939622 AGACAGTCATCATCAATTCTACACA 58.060 36.000 2.66 0.00 0.00 3.72
2544 4339 5.063438 GCACGATTGCTATTCTAAGTGTCAA 59.937 40.000 0.00 0.00 46.17 3.18
2572 4367 9.125026 CCATGCCTAAGAACTCAAAATAATAGT 57.875 33.333 0.00 0.00 0.00 2.12
2573 4368 9.125026 ACCATGCCTAAGAACTCAAAATAATAG 57.875 33.333 0.00 0.00 0.00 1.73
2574 4369 9.474313 AACCATGCCTAAGAACTCAAAATAATA 57.526 29.630 0.00 0.00 0.00 0.98
2576 4371 7.309744 CCAACCATGCCTAAGAACTCAAAATAA 60.310 37.037 0.00 0.00 0.00 1.40
2577 4372 6.152661 CCAACCATGCCTAAGAACTCAAAATA 59.847 38.462 0.00 0.00 0.00 1.40
2585 4380 2.749621 CACTCCAACCATGCCTAAGAAC 59.250 50.000 0.00 0.00 0.00 3.01
2592 4387 0.257039 ATCTCCACTCCAACCATGCC 59.743 55.000 0.00 0.00 0.00 4.40
2701 4496 7.118390 GTGCACATTTGTTAGATAGTTCTCTGT 59.882 37.037 13.17 0.00 33.17 3.41
2717 4512 4.331992 TGTTGAAACCATTGTGCACATTTG 59.668 37.500 22.39 20.08 0.00 2.32
2731 4526 7.009568 TGTGCACATTTATTTTGTTGAAACC 57.990 32.000 17.42 0.00 0.00 3.27
2740 4535 9.054922 ACAAAGCTAATTGTGCACATTTATTTT 57.945 25.926 26.10 23.97 41.78 1.82
2782 4577 5.009610 TGCACTCTTCCTCAAATTTTACACC 59.990 40.000 0.00 0.00 0.00 4.16
2784 4579 5.592282 TGTGCACTCTTCCTCAAATTTTACA 59.408 36.000 19.41 0.00 0.00 2.41
2910 4705 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
2911 4706 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
2912 4707 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
2913 4708 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2914 4709 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2920 4715 9.490083 ACAACTACTCCCTCTGTAAACTAATAT 57.510 33.333 0.00 0.00 0.00 1.28
2921 4716 8.890410 ACAACTACTCCCTCTGTAAACTAATA 57.110 34.615 0.00 0.00 0.00 0.98
2922 4717 7.453752 TGACAACTACTCCCTCTGTAAACTAAT 59.546 37.037 0.00 0.00 0.00 1.73
2923 4718 6.779049 TGACAACTACTCCCTCTGTAAACTAA 59.221 38.462 0.00 0.00 0.00 2.24
2924 4719 6.309357 TGACAACTACTCCCTCTGTAAACTA 58.691 40.000 0.00 0.00 0.00 2.24
2925 4720 5.145564 TGACAACTACTCCCTCTGTAAACT 58.854 41.667 0.00 0.00 0.00 2.66
2926 4721 5.464030 TGACAACTACTCCCTCTGTAAAC 57.536 43.478 0.00 0.00 0.00 2.01
2927 4722 6.488769 TTTGACAACTACTCCCTCTGTAAA 57.511 37.500 0.00 0.00 0.00 2.01
2928 4723 6.488769 TTTTGACAACTACTCCCTCTGTAA 57.511 37.500 0.00 0.00 0.00 2.41
2929 4724 6.269077 TGATTTTGACAACTACTCCCTCTGTA 59.731 38.462 0.00 0.00 0.00 2.74
2930 4725 5.071788 TGATTTTGACAACTACTCCCTCTGT 59.928 40.000 0.00 0.00 0.00 3.41
2931 4726 5.551233 TGATTTTGACAACTACTCCCTCTG 58.449 41.667 0.00 0.00 0.00 3.35
2932 4727 5.308237 ACTGATTTTGACAACTACTCCCTCT 59.692 40.000 0.00 0.00 0.00 3.69
2933 4728 5.552178 ACTGATTTTGACAACTACTCCCTC 58.448 41.667 0.00 0.00 0.00 4.30
2934 4729 5.568620 ACTGATTTTGACAACTACTCCCT 57.431 39.130 0.00 0.00 0.00 4.20
2935 4730 6.879458 ACATACTGATTTTGACAACTACTCCC 59.121 38.462 0.00 0.00 0.00 4.30
2936 4731 7.907214 ACATACTGATTTTGACAACTACTCC 57.093 36.000 0.00 0.00 0.00 3.85
2937 4732 8.443937 GGAACATACTGATTTTGACAACTACTC 58.556 37.037 0.00 0.00 0.00 2.59
2938 4733 8.157476 AGGAACATACTGATTTTGACAACTACT 58.843 33.333 0.00 0.00 0.00 2.57
2939 4734 8.230486 CAGGAACATACTGATTTTGACAACTAC 58.770 37.037 0.00 0.00 38.20 2.73
2940 4735 7.936847 ACAGGAACATACTGATTTTGACAACTA 59.063 33.333 0.00 0.00 39.24 2.24
2941 4736 6.772716 ACAGGAACATACTGATTTTGACAACT 59.227 34.615 0.00 0.00 39.24 3.16
2942 4737 6.970484 ACAGGAACATACTGATTTTGACAAC 58.030 36.000 0.00 0.00 39.24 3.32
2943 4738 7.581213 AACAGGAACATACTGATTTTGACAA 57.419 32.000 0.00 0.00 39.24 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.