Multiple sequence alignment - TraesCS3A01G321000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G321000 chr3A 100.000 4173 0 0 1 4173 564346671 564350843 0.000000e+00 7707.0
1 TraesCS3A01G321000 chr3A 86.585 82 10 1 3510 3591 9014561 9014481 5.750000e-14 89.8
2 TraesCS3A01G321000 chr3D 92.004 3189 180 34 383 3527 424653941 424650784 0.000000e+00 4407.0
3 TraesCS3A01G321000 chr3D 87.500 200 12 6 3620 3806 424649579 424649380 7.020000e-53 219.0
4 TraesCS3A01G321000 chr3D 79.070 344 49 13 4 340 424655445 424655118 9.090000e-52 215.0
5 TraesCS3A01G321000 chr3D 91.549 71 5 1 3509 3579 326555686 326555755 3.430000e-16 97.1
6 TraesCS3A01G321000 chr3D 84.810 79 8 3 3822 3898 424649404 424649328 4.470000e-10 76.8
7 TraesCS3A01G321000 chr3B 91.913 1892 104 25 1376 3237 554647080 554645208 0.000000e+00 2601.0
8 TraesCS3A01G321000 chr3B 89.755 654 36 12 384 1006 554648061 554647408 0.000000e+00 808.0
9 TraesCS3A01G321000 chr3B 93.023 258 9 3 3269 3525 554645207 554644958 6.590000e-98 368.0
10 TraesCS3A01G321000 chr3B 79.191 346 51 15 2 329 554648537 554648195 1.950000e-53 220.0
11 TraesCS3A01G321000 chr3B 89.610 77 8 0 3516 3592 506238591 506238515 9.550000e-17 99.0
12 TraesCS3A01G321000 chr3B 79.832 119 14 3 3609 3717 554637959 554637841 1.240000e-10 78.7
13 TraesCS3A01G321000 chr7D 93.939 264 16 0 3910 4173 191606109 191606372 2.340000e-107 399.0
14 TraesCS3A01G321000 chr7D 93.561 264 17 0 3910 4173 101209568 101209831 1.090000e-105 394.0
15 TraesCS3A01G321000 chr1D 93.939 264 16 0 3910 4173 380072191 380072454 2.340000e-107 399.0
16 TraesCS3A01G321000 chr1D 83.071 254 36 5 2790 3038 419469710 419469961 1.510000e-54 224.0
17 TraesCS3A01G321000 chr4D 93.609 266 13 4 3910 4173 365495140 365494877 1.090000e-105 394.0
18 TraesCS3A01G321000 chr4D 93.561 264 17 0 3910 4173 385451369 385451632 1.090000e-105 394.0
19 TraesCS3A01G321000 chr4D 93.561 264 17 0 3910 4173 450377754 450377491 1.090000e-105 394.0
20 TraesCS3A01G321000 chr4D 93.561 264 17 0 3910 4173 465641832 465641569 1.090000e-105 394.0
21 TraesCS3A01G321000 chr4D 93.182 264 18 0 3910 4173 83918966 83919229 5.060000e-104 388.0
22 TraesCS3A01G321000 chr4B 93.561 264 17 0 3910 4173 76993296 76993559 1.090000e-105 394.0
23 TraesCS3A01G321000 chr1B 80.709 254 42 6 2790 3038 566608173 566608424 1.530000e-44 191.0
24 TraesCS3A01G321000 chr7A 95.238 63 3 0 3526 3588 443953895 443953957 2.650000e-17 100.0
25 TraesCS3A01G321000 chr6B 91.429 70 6 0 3522 3591 49553300 49553369 3.430000e-16 97.1
26 TraesCS3A01G321000 chr5A 90.411 73 7 0 3519 3591 11283832 11283760 3.430000e-16 97.1
27 TraesCS3A01G321000 chr2A 91.429 70 6 0 3522 3591 10742509 10742578 3.430000e-16 97.1
28 TraesCS3A01G321000 chr5B 88.750 80 4 4 3522 3596 30916019 30915940 4.440000e-15 93.5
29 TraesCS3A01G321000 chr1A 88.608 79 5 4 3518 3594 41387163 41387239 4.440000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G321000 chr3A 564346671 564350843 4172 False 7707.00 7707 100.0000 1 4173 1 chr3A.!!$F1 4172
1 TraesCS3A01G321000 chr3D 424649328 424655445 6117 True 1229.45 4407 85.8460 4 3898 4 chr3D.!!$R1 3894
2 TraesCS3A01G321000 chr3B 554644958 554648537 3579 True 999.25 2601 88.4705 2 3525 4 chr3B.!!$R3 3523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 1586 0.320374 CCAAGTTGTCCGAGCCAGTA 59.680 55.0 1.45 0.0 0.0 2.74 F
1149 2445 0.503117 GTCGATTCAGAATACCGCGC 59.497 55.0 0.00 0.0 0.0 6.86 F
2163 3476 0.321671 AGTCCATCACCTTCCACACG 59.678 55.0 0.00 0.0 0.0 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1645 2941 0.106708 TACTGGAGATCGCAATGGCC 59.893 55.0 0.00 0.0 36.38 5.36 R
2704 4029 0.102481 TAATTGCTCGAGTCGGCTCC 59.898 55.0 21.25 0.0 38.49 4.70 R
4049 6522 0.179084 TTCGCCTTCATGGTCGGATC 60.179 55.0 0.00 0.0 38.35 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 3.118738 GGGTGACGGACATGAGTAATTCT 60.119 47.826 0.00 0.00 0.00 2.40
69 70 5.945784 AGTAATTCTTTGAGTGCCATGCTTA 59.054 36.000 0.00 0.00 0.00 3.09
71 72 3.701205 TCTTTGAGTGCCATGCTTAGA 57.299 42.857 0.00 0.00 0.00 2.10
77 78 1.156736 GTGCCATGCTTAGACGTGTT 58.843 50.000 0.00 0.00 0.00 3.32
79 80 1.535028 TGCCATGCTTAGACGTGTTTG 59.465 47.619 0.00 0.00 0.00 2.93
81 82 2.412847 GCCATGCTTAGACGTGTTTGTC 60.413 50.000 0.00 0.00 39.21 3.18
107 129 7.750229 ATTGACACTAATGAGCTTCTTTCAA 57.250 32.000 0.00 0.00 0.00 2.69
122 153 8.264347 AGCTTCTTTCAAACCATTTTAAAGGAA 58.736 29.630 0.71 1.67 0.00 3.36
123 154 8.551205 GCTTCTTTCAAACCATTTTAAAGGAAG 58.449 33.333 0.71 9.30 34.95 3.46
126 157 7.984617 TCTTTCAAACCATTTTAAAGGAAGGTG 59.015 33.333 0.71 0.00 0.00 4.00
134 165 2.368311 TAAAGGAAGGTGGCGGTTTT 57.632 45.000 0.00 0.00 0.00 2.43
136 167 0.750249 AAGGAAGGTGGCGGTTTTTG 59.250 50.000 0.00 0.00 0.00 2.44
154 185 0.745128 TGGGAGCAACAAACGAACGT 60.745 50.000 0.00 0.00 0.00 3.99
180 211 5.432645 TGTTGAGTCTTGTTAATGTGGTCA 58.567 37.500 0.00 0.00 0.00 4.02
234 266 4.948847 CTTTTAAGCCAAAAGGAACTGCT 58.051 39.130 11.54 0.00 46.33 4.24
253 285 5.885912 ACTGCTATTGTTTAATGGAACCGAT 59.114 36.000 0.00 0.00 0.00 4.18
263 295 1.496060 TGGAACCGATATCCAGTGCT 58.504 50.000 0.00 0.00 41.98 4.40
264 296 1.837439 TGGAACCGATATCCAGTGCTT 59.163 47.619 0.00 0.00 41.98 3.91
322 354 3.119291 GGTGAGATCATAGTGAAGTGCG 58.881 50.000 0.00 0.00 0.00 5.34
364 409 5.296780 TGAGTTCTGAGAACAAAACACCATC 59.703 40.000 25.45 12.12 30.28 3.51
368 413 5.789521 TCTGAGAACAAAACACCATCGATA 58.210 37.500 0.00 0.00 0.00 2.92
370 415 5.547465 TGAGAACAAAACACCATCGATACT 58.453 37.500 0.00 0.00 0.00 2.12
372 417 4.935808 AGAACAAAACACCATCGATACTCC 59.064 41.667 0.00 0.00 0.00 3.85
373 418 4.280436 ACAAAACACCATCGATACTCCA 57.720 40.909 0.00 0.00 0.00 3.86
374 419 4.843728 ACAAAACACCATCGATACTCCAT 58.156 39.130 0.00 0.00 0.00 3.41
376 421 6.591935 ACAAAACACCATCGATACTCCATAT 58.408 36.000 0.00 0.00 0.00 1.78
407 1586 0.320374 CCAAGTTGTCCGAGCCAGTA 59.680 55.000 1.45 0.00 0.00 2.74
471 1650 1.000486 GGAAAAGGGGAAGGCCTCC 60.000 63.158 5.23 9.41 44.54 4.30
518 1711 2.126850 GGTGAAAGAAAGCGGCGC 60.127 61.111 26.86 26.86 0.00 6.53
626 1828 1.998315 CAGCTGGTGTCAATCGAAGAG 59.002 52.381 5.57 0.00 43.63 2.85
961 2187 2.291190 GTCGCCGTCTAAAGCTCTCTAT 59.709 50.000 0.00 0.00 0.00 1.98
984 2210 1.973812 AAGGCGCTTCTGGGCTTTC 60.974 57.895 7.64 0.00 45.47 2.62
1091 2380 2.167487 TGGTTGGAAAGACAAAACTGCC 59.833 45.455 0.00 0.00 31.17 4.85
1093 2382 3.368948 GGTTGGAAAGACAAAACTGCCAA 60.369 43.478 0.00 0.00 34.85 4.52
1094 2383 3.799281 TGGAAAGACAAAACTGCCAAG 57.201 42.857 0.00 0.00 0.00 3.61
1095 2384 3.096092 TGGAAAGACAAAACTGCCAAGT 58.904 40.909 0.00 0.00 38.71 3.16
1096 2385 4.274147 TGGAAAGACAAAACTGCCAAGTA 58.726 39.130 0.00 0.00 34.77 2.24
1097 2386 4.338118 TGGAAAGACAAAACTGCCAAGTAG 59.662 41.667 0.00 0.00 34.77 2.57
1149 2445 0.503117 GTCGATTCAGAATACCGCGC 59.497 55.000 0.00 0.00 0.00 6.86
1173 2469 5.509272 CGTAGCATTAATCTTGCACTTGTTG 59.491 40.000 2.59 0.00 42.62 3.33
1209 2505 4.515567 GGCATGTTAACTAGGTAGCATTCC 59.484 45.833 15.40 15.40 0.00 3.01
1215 2511 1.000163 ACTAGGTAGCATTCCATCGCG 60.000 52.381 0.00 0.00 0.00 5.87
1219 2515 1.502231 GTAGCATTCCATCGCGTCAT 58.498 50.000 5.77 0.00 0.00 3.06
1220 2516 1.457303 GTAGCATTCCATCGCGTCATC 59.543 52.381 5.77 0.00 0.00 2.92
1242 2538 6.147864 TCAAGATTTGAACAGTTTCCTTGG 57.852 37.500 0.00 0.00 36.59 3.61
1263 2559 7.121759 CCTTGGTTCTAGTTCATGACATCAAAT 59.878 37.037 0.00 0.00 0.00 2.32
1283 2579 6.875726 TCAAATTCACTTCATGAGTAGGAGTG 59.124 38.462 15.44 15.44 38.99 3.51
1364 2660 7.816945 AGAACTGTTTGAGAATTGTTTTGTG 57.183 32.000 0.00 0.00 0.00 3.33
1366 2662 6.949578 ACTGTTTGAGAATTGTTTTGTGTG 57.050 33.333 0.00 0.00 0.00 3.82
1367 2663 5.348451 ACTGTTTGAGAATTGTTTTGTGTGC 59.652 36.000 0.00 0.00 0.00 4.57
1384 2680 4.515191 TGTGTGCTTTGGACAATAGAACTC 59.485 41.667 0.00 4.83 0.00 3.01
1419 2715 1.400142 TGTGTGTTTTGGACAAGCTCG 59.600 47.619 0.00 0.00 40.65 5.03
1431 2727 4.272504 TGGACAAGCTCGTTCTTACTTTTG 59.727 41.667 0.00 0.00 0.00 2.44
1432 2728 4.319549 GGACAAGCTCGTTCTTACTTTTGG 60.320 45.833 0.00 0.00 0.00 3.28
1537 2833 1.278238 GTCGACAGAAACGGCCATAG 58.722 55.000 11.55 0.00 0.00 2.23
1583 2879 5.750352 ATGAAATGGTTCTTGCAAAGGAT 57.250 34.783 0.00 0.00 46.24 3.24
1645 2941 1.676006 GGTAATCCATCCAGGCAAACG 59.324 52.381 0.00 0.00 37.29 3.60
1646 2942 1.676006 GTAATCCATCCAGGCAAACGG 59.324 52.381 0.00 0.00 37.29 4.44
1647 2943 1.322538 AATCCATCCAGGCAAACGGC 61.323 55.000 0.00 0.00 43.74 5.68
1656 2952 2.181525 GCAAACGGCCATTGCGAT 59.818 55.556 22.94 0.00 43.14 4.58
1660 2956 1.376609 AAACGGCCATTGCGATCTCC 61.377 55.000 2.24 0.00 38.85 3.71
1685 2995 8.026026 CCAGTACTGTATAAGTGATATCTGCAG 58.974 40.741 21.18 7.63 40.26 4.41
1694 3004 8.879342 ATAAGTGATATCTGCAGTCAAGTTAC 57.121 34.615 14.67 5.97 0.00 2.50
1712 3022 9.567776 TCAAGTTACTTAACATCCATTTCTTGA 57.432 29.630 0.00 0.00 38.62 3.02
1871 3181 1.478916 TCCGGCAGATCAACATAACGA 59.521 47.619 0.00 0.00 0.00 3.85
1980 3291 1.078637 GGCCGGAGAAGGTAACACC 60.079 63.158 5.05 0.00 38.99 4.16
1986 3297 3.558321 CCGGAGAAGGTAACACCATTTCA 60.558 47.826 0.00 0.00 41.95 2.69
1987 3298 3.684788 CGGAGAAGGTAACACCATTTCAG 59.315 47.826 0.00 0.00 41.95 3.02
1991 3302 6.434340 GGAGAAGGTAACACCATTTCAGATTT 59.566 38.462 0.00 0.00 41.95 2.17
1992 3303 7.362142 GGAGAAGGTAACACCATTTCAGATTTC 60.362 40.741 0.00 0.00 41.95 2.17
1993 3304 7.004086 AGAAGGTAACACCATTTCAGATTTCA 58.996 34.615 0.00 0.00 41.95 2.69
1994 3305 6.824305 AGGTAACACCATTTCAGATTTCAG 57.176 37.500 0.00 0.00 41.95 3.02
1995 3306 6.542821 AGGTAACACCATTTCAGATTTCAGA 58.457 36.000 0.00 0.00 41.95 3.27
1996 3307 6.656693 AGGTAACACCATTTCAGATTTCAGAG 59.343 38.462 0.00 0.00 41.95 3.35
1997 3308 5.382618 AACACCATTTCAGATTTCAGAGC 57.617 39.130 0.00 0.00 0.00 4.09
1998 3309 4.660168 ACACCATTTCAGATTTCAGAGCT 58.340 39.130 0.00 0.00 0.00 4.09
1999 3310 5.075493 ACACCATTTCAGATTTCAGAGCTT 58.925 37.500 0.00 0.00 0.00 3.74
2000 3311 5.182760 ACACCATTTCAGATTTCAGAGCTTC 59.817 40.000 0.00 0.00 0.00 3.86
2045 3358 4.204012 TCAGACTTTTGTGAAACGGGAAT 58.796 39.130 0.00 0.00 42.39 3.01
2048 3361 5.458779 CAGACTTTTGTGAAACGGGAATTTC 59.541 40.000 0.00 0.00 42.39 2.17
2049 3362 5.126384 AGACTTTTGTGAAACGGGAATTTCA 59.874 36.000 0.00 0.00 44.40 2.69
2091 3404 2.716244 CCGACGGAGATCCTGACG 59.284 66.667 8.64 7.52 0.00 4.35
2163 3476 0.321671 AGTCCATCACCTTCCACACG 59.678 55.000 0.00 0.00 0.00 4.49
2166 3479 0.673644 CCATCACCTTCCACACGACC 60.674 60.000 0.00 0.00 0.00 4.79
2289 3602 1.745489 GGACAGCATCGGGGTTCAC 60.745 63.158 0.00 0.00 0.00 3.18
2392 3705 3.828657 GGGGACGAGGTAAAGTCAC 57.171 57.895 0.00 0.00 39.89 3.67
2396 3709 2.232941 GGGACGAGGTAAAGTCACATCA 59.767 50.000 0.00 0.00 40.32 3.07
2406 3719 6.369065 AGGTAAAGTCACATCAATTTCTCGAC 59.631 38.462 0.00 0.00 0.00 4.20
2407 3720 6.369065 GGTAAAGTCACATCAATTTCTCGACT 59.631 38.462 0.00 0.00 33.85 4.18
2411 3724 5.406780 AGTCACATCAATTTCTCGACTGAAC 59.593 40.000 0.00 0.00 31.36 3.18
2412 3725 5.177511 GTCACATCAATTTCTCGACTGAACA 59.822 40.000 0.00 0.00 0.00 3.18
2413 3726 5.757808 TCACATCAATTTCTCGACTGAACAA 59.242 36.000 0.00 0.00 0.00 2.83
2414 3727 6.427853 TCACATCAATTTCTCGACTGAACAAT 59.572 34.615 0.00 0.00 0.00 2.71
2415 3728 7.602265 TCACATCAATTTCTCGACTGAACAATA 59.398 33.333 0.00 0.00 0.00 1.90
2416 3729 8.229811 CACATCAATTTCTCGACTGAACAATAA 58.770 33.333 0.00 0.00 0.00 1.40
2417 3730 8.950210 ACATCAATTTCTCGACTGAACAATAAT 58.050 29.630 0.00 0.00 0.00 1.28
2418 3731 9.218359 CATCAATTTCTCGACTGAACAATAATG 57.782 33.333 0.00 0.00 0.00 1.90
2419 3732 7.751732 TCAATTTCTCGACTGAACAATAATGG 58.248 34.615 0.00 0.00 0.00 3.16
2423 3748 5.657474 TCTCGACTGAACAATAATGGTACC 58.343 41.667 4.43 4.43 0.00 3.34
2478 3803 0.945265 TGTTGCAGGTTACGTACGGC 60.945 55.000 21.06 12.39 0.00 5.68
2695 4020 1.670406 CACAGGGTGAGCAGAGCAC 60.670 63.158 0.00 0.00 35.23 4.40
2702 4027 1.005275 TGAGCAGAGCACAGCAGAC 60.005 57.895 0.85 0.00 0.00 3.51
2704 4029 3.117171 GCAGAGCACAGCAGACCG 61.117 66.667 0.00 0.00 0.00 4.79
2714 4049 4.500116 GCAGACCGGAGCCGACTC 62.500 72.222 9.46 4.58 42.83 3.36
2717 4052 3.878519 GACCGGAGCCGACTCGAG 61.879 72.222 9.46 11.84 44.48 4.04
2817 4152 1.204704 CTATCCACACGAGGTGCTGAA 59.795 52.381 6.48 0.00 46.50 3.02
2875 4210 3.721706 CCCAGGGTGCTGAGGTCC 61.722 72.222 0.00 0.00 0.00 4.46
3090 4425 2.174319 GCTCCGTTCCCAAGATCGC 61.174 63.158 0.00 0.00 34.54 4.58
3109 4444 4.696805 GGCCCCAACCCCAAGACC 62.697 72.222 0.00 0.00 0.00 3.85
3115 4450 4.016706 AACCCCAAGACCGGCTCG 62.017 66.667 0.00 0.00 0.00 5.03
3210 4545 1.597742 TTCAGTTTGCAGGAGAGTGC 58.402 50.000 0.00 0.00 44.27 4.40
3300 4640 4.767409 TGTATCGAAGGCAGAGCTATACAT 59.233 41.667 0.00 0.00 0.00 2.29
3370 4710 7.554959 TCAGAGGACTAGTTAAAAGGAACAT 57.445 36.000 0.00 0.00 0.00 2.71
3382 4722 9.574516 AGTTAAAAGGAACATCTCATACTGTTT 57.425 29.630 0.00 0.00 35.80 2.83
3499 4845 6.351711 TGATCTTCCATCCTTTGTCACATAG 58.648 40.000 0.00 0.00 0.00 2.23
3519 4865 9.142515 CACATAGTACATTTCAAACAATTGCAT 57.857 29.630 5.05 0.00 36.45 3.96
3527 4873 8.796475 ACATTTCAAACAATTGCATAGTACTCT 58.204 29.630 5.05 0.00 36.45 3.24
3528 4874 9.282247 CATTTCAAACAATTGCATAGTACTCTC 57.718 33.333 5.05 0.00 36.45 3.20
3529 4875 8.621532 TTTCAAACAATTGCATAGTACTCTCT 57.378 30.769 5.05 0.00 36.45 3.10
3530 4876 7.834068 TCAAACAATTGCATAGTACTCTCTC 57.166 36.000 5.05 0.00 36.45 3.20
3531 4877 6.818644 TCAAACAATTGCATAGTACTCTCTCC 59.181 38.462 5.05 0.00 36.45 3.71
3532 4878 4.938080 ACAATTGCATAGTACTCTCTCCG 58.062 43.478 5.05 0.00 0.00 4.63
3533 4879 4.402793 ACAATTGCATAGTACTCTCTCCGT 59.597 41.667 5.05 0.00 0.00 4.69
3534 4880 5.593095 ACAATTGCATAGTACTCTCTCCGTA 59.407 40.000 5.05 0.00 0.00 4.02
3535 4881 6.096423 ACAATTGCATAGTACTCTCTCCGTAA 59.904 38.462 5.05 0.00 0.00 3.18
3537 4883 5.752892 TGCATAGTACTCTCTCCGTAAAG 57.247 43.478 0.00 0.00 0.00 1.85
3538 4884 5.434408 TGCATAGTACTCTCTCCGTAAAGA 58.566 41.667 0.00 0.00 0.00 2.52
3540 4886 6.376299 TGCATAGTACTCTCTCCGTAAAGAAA 59.624 38.462 0.00 0.00 0.00 2.52
3541 4887 7.068348 TGCATAGTACTCTCTCCGTAAAGAAAT 59.932 37.037 0.00 0.00 0.00 2.17
3549 4895 8.354426 ACTCTCTCCGTAAAGAAATATAAGAGC 58.646 37.037 0.00 0.00 0.00 4.09
3550 4896 7.361127 TCTCTCCGTAAAGAAATATAAGAGCG 58.639 38.462 0.00 0.00 0.00 5.03
3551 4897 7.013083 TCTCTCCGTAAAGAAATATAAGAGCGT 59.987 37.037 0.00 0.00 0.00 5.07
3552 4898 7.486647 TCTCCGTAAAGAAATATAAGAGCGTT 58.513 34.615 0.00 0.00 0.00 4.84
3553 4899 7.977853 TCTCCGTAAAGAAATATAAGAGCGTTT 59.022 33.333 0.00 0.00 0.00 3.60
3554 4900 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
3555 4901 9.754382 TCCGTAAAGAAATATAAGAGCGTTTAT 57.246 29.630 2.15 2.15 0.00 1.40
3569 4915 8.680039 AAGAGCGTTTATATCACTACTCTAGT 57.320 34.615 0.00 0.00 40.28 2.57
3580 4926 4.886247 ACTACTCTAGTGATCTGAACGC 57.114 45.455 0.00 0.00 37.69 4.84
3581 4927 4.519213 ACTACTCTAGTGATCTGAACGCT 58.481 43.478 6.26 6.26 37.69 5.07
3582 4928 4.944930 ACTACTCTAGTGATCTGAACGCTT 59.055 41.667 6.31 0.00 37.69 4.68
3587 5070 7.997482 ACTCTAGTGATCTGAACGCTTTTATA 58.003 34.615 6.31 0.00 0.00 0.98
3620 5103 8.641498 AAAAGAATCATAAACTCCATGACACT 57.359 30.769 0.00 0.00 35.33 3.55
3622 5105 9.739276 AAAGAATCATAAACTCCATGACACTAA 57.261 29.630 0.00 0.00 35.33 2.24
3623 5106 8.723942 AGAATCATAAACTCCATGACACTAAC 57.276 34.615 0.00 0.00 35.33 2.34
3624 5107 8.321353 AGAATCATAAACTCCATGACACTAACA 58.679 33.333 0.00 0.00 35.33 2.41
3625 5108 9.113838 GAATCATAAACTCCATGACACTAACAT 57.886 33.333 0.00 0.00 35.33 2.71
3626 5109 8.668510 ATCATAAACTCCATGACACTAACATC 57.331 34.615 0.00 0.00 35.33 3.06
3627 5110 7.047891 TCATAAACTCCATGACACTAACATCC 58.952 38.462 0.00 0.00 0.00 3.51
3628 5111 3.914426 ACTCCATGACACTAACATCCC 57.086 47.619 0.00 0.00 0.00 3.85
3630 5113 3.587061 ACTCCATGACACTAACATCCCAA 59.413 43.478 0.00 0.00 0.00 4.12
3661 6119 2.393271 AGAAGAAATGAGAGCCACGG 57.607 50.000 0.00 0.00 0.00 4.94
3662 6120 0.729690 GAAGAAATGAGAGCCACGGC 59.270 55.000 0.00 0.00 42.33 5.68
3683 6150 1.623311 TCATCAAGCTTCGAACCCAGA 59.377 47.619 0.00 0.00 0.00 3.86
3684 6151 1.734465 CATCAAGCTTCGAACCCAGAC 59.266 52.381 0.00 0.00 0.00 3.51
3803 6274 7.363431 TGCAACATTTCGATTACAAATACACA 58.637 30.769 0.00 0.00 0.00 3.72
3804 6275 8.026026 TGCAACATTTCGATTACAAATACACAT 58.974 29.630 0.00 0.00 0.00 3.21
3805 6276 9.497030 GCAACATTTCGATTACAAATACACATA 57.503 29.630 0.00 0.00 0.00 2.29
3824 6295 8.716646 ACACATATAGTTCATTGAATCGAACA 57.283 30.769 16.78 0.00 43.20 3.18
3825 6296 9.161629 ACACATATAGTTCATTGAATCGAACAA 57.838 29.630 16.78 10.03 43.20 2.83
3877 6348 4.961438 AGCCACCAAATTGATCAAGTTT 57.039 36.364 17.93 12.67 0.00 2.66
3881 6354 5.405269 GCCACCAAATTGATCAAGTTTACAC 59.595 40.000 17.93 4.42 0.00 2.90
3894 6367 3.403968 AGTTTACACACACACACACACA 58.596 40.909 0.00 0.00 0.00 3.72
3898 6371 0.167908 CACACACACACACACACACC 59.832 55.000 0.00 0.00 0.00 4.16
3899 6372 0.250510 ACACACACACACACACACCA 60.251 50.000 0.00 0.00 0.00 4.17
3900 6373 1.093972 CACACACACACACACACCAT 58.906 50.000 0.00 0.00 0.00 3.55
3901 6374 2.284190 CACACACACACACACACCATA 58.716 47.619 0.00 0.00 0.00 2.74
3902 6375 2.680339 CACACACACACACACACCATAA 59.320 45.455 0.00 0.00 0.00 1.90
3903 6376 2.680841 ACACACACACACACACCATAAC 59.319 45.455 0.00 0.00 0.00 1.89
3904 6377 2.680339 CACACACACACACACCATAACA 59.320 45.455 0.00 0.00 0.00 2.41
3905 6378 3.314913 CACACACACACACACCATAACAT 59.685 43.478 0.00 0.00 0.00 2.71
3906 6379 3.314913 ACACACACACACACCATAACATG 59.685 43.478 0.00 0.00 0.00 3.21
3907 6380 3.314913 CACACACACACACCATAACATGT 59.685 43.478 0.00 0.00 0.00 3.21
3908 6381 3.563808 ACACACACACACCATAACATGTC 59.436 43.478 0.00 0.00 0.00 3.06
3909 6382 3.814842 CACACACACACCATAACATGTCT 59.185 43.478 0.00 0.00 0.00 3.41
3910 6383 4.275689 CACACACACACCATAACATGTCTT 59.724 41.667 0.00 0.00 0.00 3.01
3911 6384 5.468409 CACACACACACCATAACATGTCTTA 59.532 40.000 0.00 0.00 0.00 2.10
3912 6385 6.149308 CACACACACACCATAACATGTCTTAT 59.851 38.462 0.00 0.00 0.00 1.73
3913 6386 6.714810 ACACACACACCATAACATGTCTTATT 59.285 34.615 0.00 0.00 0.00 1.40
3914 6387 7.230510 ACACACACACCATAACATGTCTTATTT 59.769 33.333 0.00 0.00 0.00 1.40
3915 6388 8.081633 CACACACACCATAACATGTCTTATTTT 58.918 33.333 0.00 0.00 0.00 1.82
3916 6389 8.296713 ACACACACCATAACATGTCTTATTTTC 58.703 33.333 0.00 0.00 0.00 2.29
3917 6390 8.514594 CACACACCATAACATGTCTTATTTTCT 58.485 33.333 0.00 0.00 0.00 2.52
3918 6391 8.514594 ACACACCATAACATGTCTTATTTTCTG 58.485 33.333 0.00 0.00 0.00 3.02
3919 6392 8.729756 CACACCATAACATGTCTTATTTTCTGA 58.270 33.333 0.00 0.00 0.00 3.27
3920 6393 8.730680 ACACCATAACATGTCTTATTTTCTGAC 58.269 33.333 0.00 0.00 0.00 3.51
3921 6394 8.184192 CACCATAACATGTCTTATTTTCTGACC 58.816 37.037 0.00 0.00 0.00 4.02
3922 6395 8.109634 ACCATAACATGTCTTATTTTCTGACCT 58.890 33.333 0.00 0.00 0.00 3.85
3923 6396 8.960591 CCATAACATGTCTTATTTTCTGACCTT 58.039 33.333 0.00 0.00 0.00 3.50
3924 6397 9.994432 CATAACATGTCTTATTTTCTGACCTTC 57.006 33.333 0.00 0.00 0.00 3.46
3925 6398 9.739276 ATAACATGTCTTATTTTCTGACCTTCA 57.261 29.630 0.00 0.00 0.00 3.02
3926 6399 7.440523 ACATGTCTTATTTTCTGACCTTCAC 57.559 36.000 0.00 0.00 0.00 3.18
3927 6400 6.998074 ACATGTCTTATTTTCTGACCTTCACA 59.002 34.615 0.00 0.00 0.00 3.58
3928 6401 7.502226 ACATGTCTTATTTTCTGACCTTCACAA 59.498 33.333 0.00 0.00 0.00 3.33
3929 6402 7.873719 TGTCTTATTTTCTGACCTTCACAAA 57.126 32.000 0.00 0.00 0.00 2.83
3930 6403 8.463930 TGTCTTATTTTCTGACCTTCACAAAT 57.536 30.769 0.00 0.00 0.00 2.32
3931 6404 8.352201 TGTCTTATTTTCTGACCTTCACAAATG 58.648 33.333 0.00 0.00 0.00 2.32
3932 6405 8.567948 GTCTTATTTTCTGACCTTCACAAATGA 58.432 33.333 0.00 0.00 0.00 2.57
3933 6406 9.300681 TCTTATTTTCTGACCTTCACAAATGAT 57.699 29.630 0.00 0.00 33.85 2.45
3934 6407 9.918630 CTTATTTTCTGACCTTCACAAATGATT 57.081 29.630 0.00 0.00 33.85 2.57
3936 6409 8.597662 ATTTTCTGACCTTCACAAATGATTTG 57.402 30.769 15.82 15.82 45.95 2.32
3937 6410 6.957920 TTCTGACCTTCACAAATGATTTGA 57.042 33.333 23.37 0.00 43.26 2.69
3938 6411 6.564709 TCTGACCTTCACAAATGATTTGAG 57.435 37.500 23.37 15.92 43.26 3.02
3939 6412 5.048504 TCTGACCTTCACAAATGATTTGAGC 60.049 40.000 23.37 4.32 43.26 4.26
3940 6413 4.583907 TGACCTTCACAAATGATTTGAGCA 59.416 37.500 23.37 6.23 43.26 4.26
3941 6414 5.130292 ACCTTCACAAATGATTTGAGCAG 57.870 39.130 23.37 14.91 43.26 4.24
3942 6415 4.828939 ACCTTCACAAATGATTTGAGCAGA 59.171 37.500 23.37 12.35 43.26 4.26
3943 6416 5.479375 ACCTTCACAAATGATTTGAGCAGAT 59.521 36.000 23.37 0.38 43.26 2.90
3944 6417 6.660521 ACCTTCACAAATGATTTGAGCAGATA 59.339 34.615 23.37 0.00 43.26 1.98
3945 6418 7.341256 ACCTTCACAAATGATTTGAGCAGATAT 59.659 33.333 23.37 3.48 43.26 1.63
3946 6419 7.648112 CCTTCACAAATGATTTGAGCAGATATG 59.352 37.037 23.37 9.26 43.26 1.78
3947 6420 7.034685 TCACAAATGATTTGAGCAGATATGG 57.965 36.000 23.37 0.00 43.26 2.74
3948 6421 6.040054 TCACAAATGATTTGAGCAGATATGGG 59.960 38.462 23.37 0.00 43.26 4.00
3949 6422 5.895534 ACAAATGATTTGAGCAGATATGGGT 59.104 36.000 23.37 0.00 43.26 4.51
3950 6423 7.013559 CACAAATGATTTGAGCAGATATGGGTA 59.986 37.037 23.37 0.00 43.26 3.69
3951 6424 7.727186 ACAAATGATTTGAGCAGATATGGGTAT 59.273 33.333 23.37 0.00 43.26 2.73
3952 6425 9.234827 CAAATGATTTGAGCAGATATGGGTATA 57.765 33.333 12.37 0.00 43.26 1.47
3953 6426 9.986157 AAATGATTTGAGCAGATATGGGTATAT 57.014 29.630 0.00 0.00 32.19 0.86
3954 6427 9.624373 AATGATTTGAGCAGATATGGGTATATC 57.376 33.333 0.00 0.00 43.59 1.63
3992 6465 9.736023 ATACAAGTCTGAAACATTTGAAAAGTC 57.264 29.630 0.00 0.00 0.00 3.01
3993 6466 7.035612 ACAAGTCTGAAACATTTGAAAAGTCC 58.964 34.615 0.00 0.00 0.00 3.85
3994 6467 6.773976 AGTCTGAAACATTTGAAAAGTCCA 57.226 33.333 0.00 0.00 0.00 4.02
3995 6468 7.169158 AGTCTGAAACATTTGAAAAGTCCAA 57.831 32.000 0.00 0.00 0.00 3.53
3996 6469 7.610865 AGTCTGAAACATTTGAAAAGTCCAAA 58.389 30.769 0.00 0.00 37.82 3.28
3997 6470 7.545615 AGTCTGAAACATTTGAAAAGTCCAAAC 59.454 33.333 0.00 0.00 36.48 2.93
3998 6471 7.330700 GTCTGAAACATTTGAAAAGTCCAAACA 59.669 33.333 0.00 0.00 36.48 2.83
3999 6472 7.875041 TCTGAAACATTTGAAAAGTCCAAACAA 59.125 29.630 0.00 0.00 36.48 2.83
4000 6473 8.558973 TGAAACATTTGAAAAGTCCAAACAAT 57.441 26.923 0.00 0.00 36.48 2.71
4001 6474 9.007901 TGAAACATTTGAAAAGTCCAAACAATT 57.992 25.926 0.00 0.00 36.48 2.32
4002 6475 9.838975 GAAACATTTGAAAAGTCCAAACAATTT 57.161 25.926 0.00 0.00 36.48 1.82
4003 6476 9.838975 AAACATTTGAAAAGTCCAAACAATTTC 57.161 25.926 0.00 0.00 36.48 2.17
4004 6477 8.558973 ACATTTGAAAAGTCCAAACAATTTCA 57.441 26.923 0.00 0.00 39.58 2.69
4005 6478 8.667463 ACATTTGAAAAGTCCAAACAATTTCAG 58.333 29.630 0.00 0.00 40.95 3.02
4006 6479 8.881743 CATTTGAAAAGTCCAAACAATTTCAGA 58.118 29.630 0.00 0.00 40.95 3.27
4007 6480 8.477984 TTTGAAAAGTCCAAACAATTTCAGAG 57.522 30.769 0.00 0.00 40.95 3.35
4008 6481 7.169158 TGAAAAGTCCAAACAATTTCAGAGT 57.831 32.000 0.00 0.00 37.97 3.24
4009 6482 7.035004 TGAAAAGTCCAAACAATTTCAGAGTG 58.965 34.615 0.00 0.00 37.97 3.51
4010 6483 6.773976 AAAGTCCAAACAATTTCAGAGTGA 57.226 33.333 0.00 0.00 0.00 3.41
4011 6484 6.773976 AAGTCCAAACAATTTCAGAGTGAA 57.226 33.333 0.00 0.00 34.03 3.18
4012 6485 6.382869 AGTCCAAACAATTTCAGAGTGAAG 57.617 37.500 0.00 0.00 37.70 3.02
4013 6486 5.888161 AGTCCAAACAATTTCAGAGTGAAGT 59.112 36.000 0.00 0.00 37.70 3.01
4014 6487 5.973565 GTCCAAACAATTTCAGAGTGAAGTG 59.026 40.000 0.00 0.00 37.70 3.16
4015 6488 5.067674 TCCAAACAATTTCAGAGTGAAGTGG 59.932 40.000 7.12 0.00 37.70 4.00
4016 6489 5.067674 CCAAACAATTTCAGAGTGAAGTGGA 59.932 40.000 7.12 0.00 37.70 4.02
4017 6490 6.204359 CAAACAATTTCAGAGTGAAGTGGAG 58.796 40.000 7.12 0.00 37.70 3.86
4018 6491 5.296151 ACAATTTCAGAGTGAAGTGGAGA 57.704 39.130 7.12 0.00 37.70 3.71
4019 6492 5.684704 ACAATTTCAGAGTGAAGTGGAGAA 58.315 37.500 7.12 0.00 37.70 2.87
4020 6493 6.302269 ACAATTTCAGAGTGAAGTGGAGAAT 58.698 36.000 7.12 0.00 37.70 2.40
4021 6494 7.453393 ACAATTTCAGAGTGAAGTGGAGAATA 58.547 34.615 7.12 0.00 37.70 1.75
4022 6495 7.939039 ACAATTTCAGAGTGAAGTGGAGAATAA 59.061 33.333 7.12 0.00 37.70 1.40
4023 6496 8.954350 CAATTTCAGAGTGAAGTGGAGAATAAT 58.046 33.333 0.00 0.00 37.70 1.28
4024 6497 8.729805 ATTTCAGAGTGAAGTGGAGAATAATC 57.270 34.615 0.00 0.00 37.70 1.75
4025 6498 5.895928 TCAGAGTGAAGTGGAGAATAATCG 58.104 41.667 0.00 0.00 0.00 3.34
4026 6499 5.419155 TCAGAGTGAAGTGGAGAATAATCGT 59.581 40.000 0.00 0.00 0.00 3.73
4027 6500 6.602009 TCAGAGTGAAGTGGAGAATAATCGTA 59.398 38.462 0.00 0.00 0.00 3.43
4028 6501 7.122204 TCAGAGTGAAGTGGAGAATAATCGTAA 59.878 37.037 0.00 0.00 0.00 3.18
4029 6502 7.221067 CAGAGTGAAGTGGAGAATAATCGTAAC 59.779 40.741 0.00 0.00 0.00 2.50
4030 6503 6.931838 AGTGAAGTGGAGAATAATCGTAACA 58.068 36.000 0.00 0.00 0.00 2.41
4031 6504 7.383687 AGTGAAGTGGAGAATAATCGTAACAA 58.616 34.615 0.00 0.00 0.00 2.83
4032 6505 7.545965 AGTGAAGTGGAGAATAATCGTAACAAG 59.454 37.037 0.00 0.00 0.00 3.16
4033 6506 7.544566 GTGAAGTGGAGAATAATCGTAACAAGA 59.455 37.037 0.00 0.00 0.00 3.02
4034 6507 8.092068 TGAAGTGGAGAATAATCGTAACAAGAA 58.908 33.333 0.00 0.00 0.00 2.52
4035 6508 8.842358 AAGTGGAGAATAATCGTAACAAGAAA 57.158 30.769 0.00 0.00 0.00 2.52
4036 6509 8.842358 AGTGGAGAATAATCGTAACAAGAAAA 57.158 30.769 0.00 0.00 0.00 2.29
4037 6510 9.449719 AGTGGAGAATAATCGTAACAAGAAAAT 57.550 29.630 0.00 0.00 0.00 1.82
4054 6527 8.440833 ACAAGAAAATAAAGTTTCTACGATCCG 58.559 33.333 5.90 0.00 45.09 4.18
4055 6528 8.653338 CAAGAAAATAAAGTTTCTACGATCCGA 58.347 33.333 5.90 0.00 45.09 4.55
4056 6529 8.182658 AGAAAATAAAGTTTCTACGATCCGAC 57.817 34.615 3.74 0.00 44.24 4.79
4057 6530 6.898912 AAATAAAGTTTCTACGATCCGACC 57.101 37.500 0.00 0.00 0.00 4.79
4058 6531 3.947910 AAAGTTTCTACGATCCGACCA 57.052 42.857 0.00 0.00 0.00 4.02
4059 6532 4.467198 AAAGTTTCTACGATCCGACCAT 57.533 40.909 0.00 0.00 0.00 3.55
4060 6533 3.438297 AGTTTCTACGATCCGACCATG 57.562 47.619 0.00 0.00 0.00 3.66
4061 6534 3.021695 AGTTTCTACGATCCGACCATGA 58.978 45.455 0.00 0.00 0.00 3.07
4062 6535 3.446161 AGTTTCTACGATCCGACCATGAA 59.554 43.478 0.00 0.00 0.00 2.57
4063 6536 3.710326 TTCTACGATCCGACCATGAAG 57.290 47.619 0.00 0.00 0.00 3.02
4064 6537 1.954382 TCTACGATCCGACCATGAAGG 59.046 52.381 0.00 0.00 45.67 3.46
4065 6538 0.387929 TACGATCCGACCATGAAGGC 59.612 55.000 0.00 0.00 43.14 4.35
4066 6539 1.951130 CGATCCGACCATGAAGGCG 60.951 63.158 0.00 0.00 43.14 5.52
4067 6540 1.441729 GATCCGACCATGAAGGCGA 59.558 57.895 0.00 0.00 43.14 5.54
4068 6541 0.179084 GATCCGACCATGAAGGCGAA 60.179 55.000 0.00 0.00 43.14 4.70
4069 6542 0.469917 ATCCGACCATGAAGGCGAAT 59.530 50.000 0.00 0.00 43.14 3.34
4070 6543 1.116308 TCCGACCATGAAGGCGAATA 58.884 50.000 0.00 0.00 43.14 1.75
4071 6544 1.691976 TCCGACCATGAAGGCGAATAT 59.308 47.619 0.00 0.00 43.14 1.28
4072 6545 2.104111 TCCGACCATGAAGGCGAATATT 59.896 45.455 0.00 0.00 43.14 1.28
4073 6546 2.878406 CCGACCATGAAGGCGAATATTT 59.122 45.455 0.00 0.00 43.14 1.40
4074 6547 3.303990 CCGACCATGAAGGCGAATATTTG 60.304 47.826 0.00 0.00 43.14 2.32
4075 6548 3.559655 CGACCATGAAGGCGAATATTTGA 59.440 43.478 6.89 0.00 43.14 2.69
4076 6549 4.319046 CGACCATGAAGGCGAATATTTGAG 60.319 45.833 6.89 0.00 43.14 3.02
4077 6550 4.526970 ACCATGAAGGCGAATATTTGAGT 58.473 39.130 6.89 0.00 43.14 3.41
4078 6551 4.949856 ACCATGAAGGCGAATATTTGAGTT 59.050 37.500 6.89 0.00 43.14 3.01
4079 6552 6.119536 ACCATGAAGGCGAATATTTGAGTTA 58.880 36.000 6.89 0.00 43.14 2.24
4080 6553 6.038271 ACCATGAAGGCGAATATTTGAGTTAC 59.962 38.462 6.89 0.00 43.14 2.50
4081 6554 5.712217 TGAAGGCGAATATTTGAGTTACG 57.288 39.130 6.89 0.00 0.00 3.18
4082 6555 5.412640 TGAAGGCGAATATTTGAGTTACGA 58.587 37.500 6.89 0.00 0.00 3.43
4083 6556 5.518847 TGAAGGCGAATATTTGAGTTACGAG 59.481 40.000 6.89 0.00 0.00 4.18
4084 6557 5.007385 AGGCGAATATTTGAGTTACGAGT 57.993 39.130 6.89 0.00 0.00 4.18
4085 6558 5.416947 AGGCGAATATTTGAGTTACGAGTT 58.583 37.500 6.89 0.00 0.00 3.01
4086 6559 5.873164 AGGCGAATATTTGAGTTACGAGTTT 59.127 36.000 6.89 0.00 0.00 2.66
4087 6560 5.957796 GGCGAATATTTGAGTTACGAGTTTG 59.042 40.000 6.89 0.00 0.00 2.93
4088 6561 5.957796 GCGAATATTTGAGTTACGAGTTTGG 59.042 40.000 6.89 0.00 0.00 3.28
4089 6562 5.957796 CGAATATTTGAGTTACGAGTTTGGC 59.042 40.000 0.00 0.00 0.00 4.52
4090 6563 5.813080 ATATTTGAGTTACGAGTTTGGCC 57.187 39.130 0.00 0.00 0.00 5.36
4091 6564 2.922740 TTGAGTTACGAGTTTGGCCT 57.077 45.000 3.32 0.00 0.00 5.19
4092 6565 2.922740 TGAGTTACGAGTTTGGCCTT 57.077 45.000 3.32 0.00 0.00 4.35
4093 6566 2.762745 TGAGTTACGAGTTTGGCCTTC 58.237 47.619 3.32 0.00 0.00 3.46
4094 6567 2.103432 TGAGTTACGAGTTTGGCCTTCA 59.897 45.455 3.32 0.00 0.00 3.02
4095 6568 3.244422 TGAGTTACGAGTTTGGCCTTCAT 60.244 43.478 3.32 0.00 0.00 2.57
4096 6569 3.751518 AGTTACGAGTTTGGCCTTCATT 58.248 40.909 3.32 0.00 0.00 2.57
4097 6570 4.142038 AGTTACGAGTTTGGCCTTCATTT 58.858 39.130 3.32 0.00 0.00 2.32
4098 6571 5.310451 AGTTACGAGTTTGGCCTTCATTTA 58.690 37.500 3.32 0.00 0.00 1.40
4099 6572 5.766174 AGTTACGAGTTTGGCCTTCATTTAA 59.234 36.000 3.32 0.00 0.00 1.52
4100 6573 6.263617 AGTTACGAGTTTGGCCTTCATTTAAA 59.736 34.615 3.32 0.00 0.00 1.52
4101 6574 5.523438 ACGAGTTTGGCCTTCATTTAAAA 57.477 34.783 3.32 0.00 0.00 1.52
4102 6575 5.286438 ACGAGTTTGGCCTTCATTTAAAAC 58.714 37.500 3.32 3.44 0.00 2.43
4103 6576 5.163499 ACGAGTTTGGCCTTCATTTAAAACA 60.163 36.000 3.32 0.00 31.53 2.83
4104 6577 5.751028 CGAGTTTGGCCTTCATTTAAAACAA 59.249 36.000 3.32 0.00 31.53 2.83
4105 6578 6.423604 CGAGTTTGGCCTTCATTTAAAACAAT 59.576 34.615 3.32 0.00 31.53 2.71
4106 6579 7.495135 AGTTTGGCCTTCATTTAAAACAATG 57.505 32.000 3.32 0.00 35.73 2.82
4107 6580 7.053498 AGTTTGGCCTTCATTTAAAACAATGT 58.947 30.769 3.32 0.00 35.86 2.71
4108 6581 7.226523 AGTTTGGCCTTCATTTAAAACAATGTC 59.773 33.333 3.32 0.00 35.86 3.06
4109 6582 6.166984 TGGCCTTCATTTAAAACAATGTCA 57.833 33.333 3.32 0.00 35.86 3.58
4110 6583 6.586344 TGGCCTTCATTTAAAACAATGTCAA 58.414 32.000 3.32 0.00 35.86 3.18
4111 6584 7.050377 TGGCCTTCATTTAAAACAATGTCAAA 58.950 30.769 3.32 0.00 35.86 2.69
4112 6585 7.718753 TGGCCTTCATTTAAAACAATGTCAAAT 59.281 29.630 3.32 0.00 35.86 2.32
4113 6586 8.229811 GGCCTTCATTTAAAACAATGTCAAATC 58.770 33.333 0.00 0.00 35.86 2.17
4114 6587 8.772705 GCCTTCATTTAAAACAATGTCAAATCA 58.227 29.630 0.00 0.00 35.86 2.57
4124 6597 8.721019 AAACAATGTCAAATCATTTCACAACT 57.279 26.923 0.00 0.00 36.10 3.16
4125 6598 7.935338 ACAATGTCAAATCATTTCACAACTC 57.065 32.000 0.00 0.00 36.10 3.01
4126 6599 7.490840 ACAATGTCAAATCATTTCACAACTCA 58.509 30.769 0.00 0.00 36.10 3.41
4127 6600 7.436080 ACAATGTCAAATCATTTCACAACTCAC 59.564 33.333 0.00 0.00 36.10 3.51
4128 6601 5.509771 TGTCAAATCATTTCACAACTCACG 58.490 37.500 0.00 0.00 0.00 4.35
4129 6602 5.065859 TGTCAAATCATTTCACAACTCACGT 59.934 36.000 0.00 0.00 0.00 4.49
4130 6603 5.621228 GTCAAATCATTTCACAACTCACGTC 59.379 40.000 0.00 0.00 0.00 4.34
4131 6604 5.295540 TCAAATCATTTCACAACTCACGTCA 59.704 36.000 0.00 0.00 0.00 4.35
4132 6605 4.732285 ATCATTTCACAACTCACGTCAC 57.268 40.909 0.00 0.00 0.00 3.67
4133 6606 2.869801 TCATTTCACAACTCACGTCACC 59.130 45.455 0.00 0.00 0.00 4.02
4134 6607 2.684001 TTTCACAACTCACGTCACCT 57.316 45.000 0.00 0.00 0.00 4.00
4135 6608 1.934589 TTCACAACTCACGTCACCTG 58.065 50.000 0.00 0.00 0.00 4.00
4136 6609 0.104120 TCACAACTCACGTCACCTGG 59.896 55.000 0.00 0.00 0.00 4.45
4137 6610 0.104120 CACAACTCACGTCACCTGGA 59.896 55.000 0.00 0.00 0.00 3.86
4138 6611 0.828022 ACAACTCACGTCACCTGGAA 59.172 50.000 0.00 0.00 0.00 3.53
4139 6612 1.217882 CAACTCACGTCACCTGGAAC 58.782 55.000 0.00 0.00 0.00 3.62
4140 6613 0.828022 AACTCACGTCACCTGGAACA 59.172 50.000 0.00 0.00 0.00 3.18
4141 6614 0.104304 ACTCACGTCACCTGGAACAC 59.896 55.000 0.00 0.00 0.00 3.32
4142 6615 0.600255 CTCACGTCACCTGGAACACC 60.600 60.000 0.00 0.00 0.00 4.16
4143 6616 1.145156 CACGTCACCTGGAACACCA 59.855 57.895 0.00 0.00 0.00 4.17
4144 6617 1.145377 ACGTCACCTGGAACACCAC 59.855 57.895 0.00 0.00 0.00 4.16
4145 6618 1.145156 CGTCACCTGGAACACCACA 59.855 57.895 0.00 0.00 0.00 4.17
4146 6619 0.462937 CGTCACCTGGAACACCACAA 60.463 55.000 0.00 0.00 0.00 3.33
4147 6620 1.021968 GTCACCTGGAACACCACAAC 58.978 55.000 0.00 0.00 0.00 3.32
4148 6621 0.462937 TCACCTGGAACACCACAACG 60.463 55.000 0.00 0.00 0.00 4.10
4149 6622 0.746563 CACCTGGAACACCACAACGT 60.747 55.000 0.00 0.00 0.00 3.99
4150 6623 0.831966 ACCTGGAACACCACAACGTA 59.168 50.000 0.00 0.00 0.00 3.57
4151 6624 1.209990 ACCTGGAACACCACAACGTAA 59.790 47.619 0.00 0.00 0.00 3.18
4152 6625 2.158726 ACCTGGAACACCACAACGTAAT 60.159 45.455 0.00 0.00 0.00 1.89
4153 6626 2.225491 CCTGGAACACCACAACGTAATG 59.775 50.000 0.00 0.00 0.00 1.90
4154 6627 2.222886 TGGAACACCACAACGTAATGG 58.777 47.619 14.84 14.84 42.13 3.16
4160 6633 2.961522 CCACAACGTAATGGTGTGTC 57.038 50.000 13.93 0.00 0.00 3.67
4161 6634 1.533731 CCACAACGTAATGGTGTGTCC 59.466 52.381 13.93 0.00 0.00 4.02
4170 6643 3.790691 TGGTGTGTCCAAACATCGT 57.209 47.368 0.00 0.00 44.12 3.73
4171 6644 2.912690 TGGTGTGTCCAAACATCGTA 57.087 45.000 0.00 0.00 44.12 3.43
4172 6645 3.195471 TGGTGTGTCCAAACATCGTAA 57.805 42.857 0.00 0.00 44.12 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.684805 TCTTCCTTCTCCTCCGAGCC 60.685 60.000 0.00 0.00 35.94 4.70
53 54 2.076100 CGTCTAAGCATGGCACTCAAA 58.924 47.619 0.00 0.00 0.00 2.69
79 80 8.485976 AAAGAAGCTCATTAGTGTCAATAGAC 57.514 34.615 0.00 0.00 45.19 2.59
81 82 8.484641 TGAAAGAAGCTCATTAGTGTCAATAG 57.515 34.615 0.00 0.00 0.00 1.73
83 84 7.750229 TTGAAAGAAGCTCATTAGTGTCAAT 57.250 32.000 0.00 0.00 0.00 2.57
84 85 7.417612 GTTTGAAAGAAGCTCATTAGTGTCAA 58.582 34.615 0.00 0.00 0.00 3.18
85 86 6.017109 GGTTTGAAAGAAGCTCATTAGTGTCA 60.017 38.462 0.00 0.00 0.00 3.58
87 88 5.827797 TGGTTTGAAAGAAGCTCATTAGTGT 59.172 36.000 0.00 0.00 0.00 3.55
88 89 6.317789 TGGTTTGAAAGAAGCTCATTAGTG 57.682 37.500 0.00 0.00 0.00 2.74
89 90 7.530426 AATGGTTTGAAAGAAGCTCATTAGT 57.470 32.000 0.00 0.00 0.00 2.24
90 91 8.822652 AAAATGGTTTGAAAGAAGCTCATTAG 57.177 30.769 0.00 0.00 0.00 1.73
98 120 9.045223 CCTTCCTTTAAAATGGTTTGAAAGAAG 57.955 33.333 11.94 12.00 38.87 2.85
107 129 3.006430 CGCCACCTTCCTTTAAAATGGTT 59.994 43.478 0.00 0.00 0.00 3.67
122 153 1.530655 CTCCCAAAAACCGCCACCT 60.531 57.895 0.00 0.00 0.00 4.00
123 154 3.047735 CTCCCAAAAACCGCCACC 58.952 61.111 0.00 0.00 0.00 4.61
126 157 1.300620 GTTGCTCCCAAAAACCGCC 60.301 57.895 0.00 0.00 31.68 6.13
134 165 0.378962 CGTTCGTTTGTTGCTCCCAA 59.621 50.000 0.00 0.00 0.00 4.12
136 167 0.379316 AACGTTCGTTTGTTGCTCCC 59.621 50.000 4.72 0.00 0.00 4.30
154 185 7.094162 TGACCACATTAACAAGACTCAACAAAA 60.094 33.333 0.00 0.00 0.00 2.44
220 251 7.331687 CCATTAAACAATAGCAGTTCCTTTTGG 59.668 37.037 0.00 0.00 42.21 3.28
234 266 8.215050 ACTGGATATCGGTTCCATTAAACAATA 58.785 33.333 0.00 0.00 42.26 1.90
253 285 2.419990 CCATCCGTTGAAGCACTGGATA 60.420 50.000 0.00 0.00 37.33 2.59
263 295 4.294523 CGGCTTCCATCCGTTGAA 57.705 55.556 0.00 0.00 41.85 2.69
322 354 0.311790 CATATTCCACACATGCGGGC 59.688 55.000 0.00 0.00 0.00 6.13
345 390 4.066646 TCGATGGTGTTTTGTTCTCAGA 57.933 40.909 0.00 0.00 0.00 3.27
372 417 3.942829 ACTTGGTGGCCATATCGATATG 58.057 45.455 30.41 30.41 39.80 1.78
373 418 4.202461 ACAACTTGGTGGCCATATCGATAT 60.202 41.667 9.72 12.25 31.53 1.63
374 419 3.135712 ACAACTTGGTGGCCATATCGATA 59.864 43.478 9.72 7.75 31.53 2.92
376 421 1.280710 ACAACTTGGTGGCCATATCGA 59.719 47.619 9.72 0.70 31.53 3.59
453 1632 1.000486 GGAGGCCTTCCCCTTTTCC 60.000 63.158 6.77 0.00 40.37 3.13
480 1659 7.765304 CACCTGTTGTGTGCATCAGAATGAC 62.765 48.000 0.00 0.00 44.23 3.06
485 1664 1.140652 TCACCTGTTGTGTGCATCAGA 59.859 47.619 0.00 0.00 45.61 3.27
486 1665 1.596603 TCACCTGTTGTGTGCATCAG 58.403 50.000 0.00 0.00 45.61 2.90
495 1674 1.676006 CCGCTTTCTTTCACCTGTTGT 59.324 47.619 0.00 0.00 0.00 3.32
518 1711 5.273170 TCAGAGAATGTTTCGCTTTTGTTG 58.727 37.500 0.00 0.00 37.74 3.33
573 1775 3.564053 TTCACGGTGGGAAACTAAAGT 57.436 42.857 8.50 0.00 0.00 2.66
621 1823 2.094130 ACGAAAGGGGAACGATCTCTTC 60.094 50.000 0.00 0.00 0.00 2.87
626 1828 1.471153 GGAGACGAAAGGGGAACGATC 60.471 57.143 0.00 0.00 0.00 3.69
961 2187 1.003355 CCCAGAAGCGCCTTGAAGA 60.003 57.895 2.29 0.00 0.00 2.87
984 2210 0.523072 CCATGTTCCGCTGTCCAAAG 59.477 55.000 0.00 0.00 0.00 2.77
1091 2380 5.255710 AGCATGCTACTGACTACTACTTG 57.744 43.478 21.21 0.00 0.00 3.16
1093 2382 4.707448 ACAAGCATGCTACTGACTACTACT 59.293 41.667 23.00 0.00 0.00 2.57
1094 2383 4.800993 CACAAGCATGCTACTGACTACTAC 59.199 45.833 23.00 0.00 0.00 2.73
1095 2384 4.462834 ACACAAGCATGCTACTGACTACTA 59.537 41.667 23.00 0.00 0.00 1.82
1096 2385 3.259374 ACACAAGCATGCTACTGACTACT 59.741 43.478 23.00 0.00 0.00 2.57
1097 2386 3.589988 ACACAAGCATGCTACTGACTAC 58.410 45.455 23.00 0.00 0.00 2.73
1149 2445 5.221891 ACAAGTGCAAGATTAATGCTACG 57.778 39.130 0.00 0.00 44.14 3.51
1173 2469 3.508744 AACATGCCAATTTCGGTCATC 57.491 42.857 0.00 0.00 0.00 2.92
1209 2505 3.931285 TCAAATCTTGATGACGCGATG 57.069 42.857 15.93 0.00 34.08 3.84
1215 2511 6.974965 AGGAAACTGTTCAAATCTTGATGAC 58.025 36.000 0.00 0.00 41.13 3.06
1219 2515 5.656416 ACCAAGGAAACTGTTCAAATCTTGA 59.344 36.000 15.80 0.00 42.68 3.02
1220 2516 5.906073 ACCAAGGAAACTGTTCAAATCTTG 58.094 37.500 0.00 4.39 42.68 3.02
1242 2538 8.725148 AGTGAATTTGATGTCATGAACTAGAAC 58.275 33.333 0.00 0.00 0.00 3.01
1263 2559 4.832823 TCACACTCCTACTCATGAAGTGAA 59.167 41.667 24.48 12.99 39.11 3.18
1364 2660 5.948992 AAGAGTTCTATTGTCCAAAGCAC 57.051 39.130 0.00 0.00 0.00 4.40
1366 2662 6.428159 TCTGAAAGAGTTCTATTGTCCAAAGC 59.572 38.462 0.00 0.00 38.67 3.51
1367 2663 7.969536 TCTGAAAGAGTTCTATTGTCCAAAG 57.030 36.000 0.00 0.00 38.67 2.77
1384 2680 7.745594 CCAAAACACACAAAACAATTCTGAAAG 59.254 33.333 0.00 0.00 0.00 2.62
1466 2762 0.322456 CGCTGGAAGGATTTGGGTCA 60.322 55.000 0.00 0.00 0.00 4.02
1469 2765 1.379044 AGCGCTGGAAGGATTTGGG 60.379 57.895 10.39 0.00 0.00 4.12
1537 2833 3.022287 CATTGCCATCCGCGTACC 58.978 61.111 4.92 0.00 42.08 3.34
1583 2879 3.387699 TGCGTGATGGATTAGGATTCTGA 59.612 43.478 0.00 0.00 0.00 3.27
1645 2941 0.106708 TACTGGAGATCGCAATGGCC 59.893 55.000 0.00 0.00 36.38 5.36
1646 2942 1.202580 AGTACTGGAGATCGCAATGGC 60.203 52.381 0.00 0.00 0.00 4.40
1647 2943 2.159043 ACAGTACTGGAGATCGCAATGG 60.159 50.000 26.12 0.00 34.19 3.16
1648 2944 3.170791 ACAGTACTGGAGATCGCAATG 57.829 47.619 26.12 0.00 34.19 2.82
1649 2945 6.265649 ACTTATACAGTACTGGAGATCGCAAT 59.734 38.462 26.12 3.34 31.97 3.56
1650 2946 5.593095 ACTTATACAGTACTGGAGATCGCAA 59.407 40.000 26.12 0.00 31.97 4.85
1651 2947 5.008712 CACTTATACAGTACTGGAGATCGCA 59.991 44.000 26.12 0.00 32.76 5.10
1652 2948 5.238868 TCACTTATACAGTACTGGAGATCGC 59.761 44.000 26.12 0.00 32.76 4.58
1653 2949 6.862711 TCACTTATACAGTACTGGAGATCG 57.137 41.667 26.12 12.05 32.76 3.69
1656 2952 9.508642 CAGATATCACTTATACAGTACTGGAGA 57.491 37.037 26.12 13.53 32.76 3.71
1660 2956 8.572185 ACTGCAGATATCACTTATACAGTACTG 58.428 37.037 23.35 21.44 31.91 2.74
1685 2995 9.612620 CAAGAAATGGATGTTAAGTAACTTGAC 57.387 33.333 0.00 0.00 37.12 3.18
1741 3051 2.427453 GTTGTCCGAGATGAAGCTAGGA 59.573 50.000 0.00 0.00 37.35 2.94
1871 3181 2.211279 GGATATCCCCAGCCCCCT 59.789 66.667 11.02 0.00 0.00 4.79
1924 3234 3.197790 CGCTTGTCGCCCCAGATG 61.198 66.667 0.00 0.00 34.21 2.90
1960 3270 0.108281 GTGTTACCTTCTCCGGCCTC 60.108 60.000 0.00 0.00 0.00 4.70
1963 3273 0.252197 ATGGTGTTACCTTCTCCGGC 59.748 55.000 0.00 0.00 39.58 6.13
1969 3279 7.174946 TCTGAAATCTGAAATGGTGTTACCTTC 59.825 37.037 0.00 0.00 39.58 3.46
1980 3291 6.497785 ACTGAAGCTCTGAAATCTGAAATG 57.502 37.500 0.00 0.00 0.00 2.32
1986 3297 5.862845 TCTGAAACTGAAGCTCTGAAATCT 58.137 37.500 0.00 0.00 0.00 2.40
1987 3298 5.390779 GCTCTGAAACTGAAGCTCTGAAATC 60.391 44.000 0.00 0.00 0.00 2.17
1991 3302 2.366590 TGCTCTGAAACTGAAGCTCTGA 59.633 45.455 0.00 0.00 0.00 3.27
1992 3303 2.763933 TGCTCTGAAACTGAAGCTCTG 58.236 47.619 0.00 0.00 0.00 3.35
1993 3304 3.336468 CATGCTCTGAAACTGAAGCTCT 58.664 45.455 0.00 0.00 0.00 4.09
1994 3305 2.419324 CCATGCTCTGAAACTGAAGCTC 59.581 50.000 0.00 0.00 0.00 4.09
1995 3306 2.039480 TCCATGCTCTGAAACTGAAGCT 59.961 45.455 0.00 0.00 0.00 3.74
1996 3307 2.430465 TCCATGCTCTGAAACTGAAGC 58.570 47.619 0.00 0.00 0.00 3.86
1997 3308 4.259356 TCATCCATGCTCTGAAACTGAAG 58.741 43.478 0.00 0.00 0.00 3.02
1998 3309 4.259356 CTCATCCATGCTCTGAAACTGAA 58.741 43.478 0.00 0.00 0.00 3.02
1999 3310 3.262660 ACTCATCCATGCTCTGAAACTGA 59.737 43.478 0.00 0.00 0.00 3.41
2000 3311 3.607741 ACTCATCCATGCTCTGAAACTG 58.392 45.455 0.00 0.00 0.00 3.16
2039 3352 1.824230 TCTGCCCAAATGAAATTCCCG 59.176 47.619 0.00 0.00 33.67 5.14
2045 3358 5.827267 TCGAATATGATCTGCCCAAATGAAA 59.173 36.000 0.00 0.00 0.00 2.69
2048 3361 4.758674 AGTCGAATATGATCTGCCCAAATG 59.241 41.667 0.00 0.00 0.00 2.32
2049 3362 4.978099 AGTCGAATATGATCTGCCCAAAT 58.022 39.130 0.00 0.00 0.00 2.32
2163 3476 1.376037 CCCGTGGCTCTTCTTGGTC 60.376 63.158 0.00 0.00 0.00 4.02
2271 3584 1.745489 GTGAACCCCGATGCTGTCC 60.745 63.158 0.00 0.00 0.00 4.02
2289 3602 1.672356 CACCTTGCCTTCCAGGACG 60.672 63.158 0.00 0.00 37.67 4.79
2392 3705 9.218359 CATTATTGTTCAGTCGAGAAATTGATG 57.782 33.333 0.00 0.00 0.00 3.07
2396 3709 7.687941 ACCATTATTGTTCAGTCGAGAAATT 57.312 32.000 0.00 0.00 0.00 1.82
2406 3719 3.560068 GCCTCGGTACCATTATTGTTCAG 59.440 47.826 13.54 0.00 0.00 3.02
2407 3720 3.055021 TGCCTCGGTACCATTATTGTTCA 60.055 43.478 13.54 0.00 0.00 3.18
2411 3724 3.804036 TCTTGCCTCGGTACCATTATTG 58.196 45.455 13.54 0.00 0.00 1.90
2412 3725 4.497291 TTCTTGCCTCGGTACCATTATT 57.503 40.909 13.54 0.00 0.00 1.40
2413 3726 4.141482 ACATTCTTGCCTCGGTACCATTAT 60.141 41.667 13.54 0.00 0.00 1.28
2414 3727 3.199071 ACATTCTTGCCTCGGTACCATTA 59.801 43.478 13.54 0.00 0.00 1.90
2415 3728 2.026262 ACATTCTTGCCTCGGTACCATT 60.026 45.455 13.54 0.00 0.00 3.16
2416 3729 1.559682 ACATTCTTGCCTCGGTACCAT 59.440 47.619 13.54 0.00 0.00 3.55
2417 3730 0.981183 ACATTCTTGCCTCGGTACCA 59.019 50.000 13.54 0.00 0.00 3.25
2418 3731 1.338769 ACACATTCTTGCCTCGGTACC 60.339 52.381 0.16 0.16 0.00 3.34
2419 3732 2.000447 GACACATTCTTGCCTCGGTAC 59.000 52.381 0.00 0.00 0.00 3.34
2423 3748 1.998315 CTCAGACACATTCTTGCCTCG 59.002 52.381 0.00 0.00 28.96 4.63
2478 3803 1.997606 GGTATCGGTTCTTTCACCACG 59.002 52.381 0.00 0.00 36.49 4.94
2667 3992 0.686789 TCACCCTGTGTGTGATCTGG 59.313 55.000 0.00 0.00 45.61 3.86
2695 4020 4.803426 GTCGGCTCCGGTCTGCTG 62.803 72.222 15.77 15.77 40.25 4.41
2704 4029 0.102481 TAATTGCTCGAGTCGGCTCC 59.898 55.000 21.25 0.00 38.49 4.70
2714 4049 4.595116 CAAAAGAGATGGCTAATTGCTCG 58.405 43.478 0.00 0.00 42.39 5.03
2717 4052 4.110482 CTGCAAAAGAGATGGCTAATTGC 58.890 43.478 0.00 0.00 39.41 3.56
2800 4135 1.069090 GTTCAGCACCTCGTGTGGA 59.931 57.895 9.30 0.00 45.55 4.02
2817 4152 4.340097 TGTTGTAGTAGCCGTATATGCAGT 59.660 41.667 0.00 0.00 0.00 4.40
2887 4222 4.096003 TACTTGCCCCGGCTGCTC 62.096 66.667 14.33 0.00 42.51 4.26
3109 4444 2.421739 CTGGGGTTATCCGAGCCG 59.578 66.667 0.00 0.00 38.07 5.52
3115 4450 2.927056 CCAGCCCTGGGGTTATCC 59.073 66.667 16.31 0.00 46.81 2.59
3300 4640 1.451072 GTAACACACCCCAACCGGA 59.549 57.895 9.46 0.00 0.00 5.14
3370 4710 4.627058 TGCTCGTTTGAAACAGTATGAGA 58.373 39.130 8.93 0.00 39.69 3.27
3382 4722 4.192429 TCTGATCTTGATGCTCGTTTGA 57.808 40.909 0.00 0.00 0.00 2.69
3426 4771 1.172812 GCAAGAGAAGGTTTGCGGGT 61.173 55.000 0.00 0.00 40.09 5.28
3499 4845 9.840427 AGTACTATGCAATTGTTTGAAATGTAC 57.160 29.630 7.40 9.50 33.47 2.90
3527 4873 7.035840 ACGCTCTTATATTTCTTTACGGAGA 57.964 36.000 0.00 0.00 0.00 3.71
3528 4874 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
3529 4875 9.754382 ATAAACGCTCTTATATTTCTTTACGGA 57.246 29.630 0.00 0.00 0.00 4.69
3544 4890 8.680039 ACTAGAGTAGTGATATAAACGCTCTT 57.320 34.615 16.05 4.96 37.69 2.85
3560 4906 5.493133 AAGCGTTCAGATCACTAGAGTAG 57.507 43.478 0.00 0.00 0.00 2.57
3562 4908 4.792521 AAAGCGTTCAGATCACTAGAGT 57.207 40.909 0.00 0.00 0.00 3.24
3564 4910 9.817809 AAATATAAAAGCGTTCAGATCACTAGA 57.182 29.630 0.00 0.00 0.00 2.43
3596 5079 9.739276 TTAGTGTCATGGAGTTTATGATTCTTT 57.261 29.630 0.00 0.00 36.96 2.52
3599 5082 8.492673 TGTTAGTGTCATGGAGTTTATGATTC 57.507 34.615 0.00 0.00 36.96 2.52
3602 5085 7.047891 GGATGTTAGTGTCATGGAGTTTATGA 58.952 38.462 0.00 0.00 32.44 2.15
3604 5087 6.069673 TGGGATGTTAGTGTCATGGAGTTTAT 60.070 38.462 0.00 0.00 0.00 1.40
3605 5088 5.249622 TGGGATGTTAGTGTCATGGAGTTTA 59.750 40.000 0.00 0.00 0.00 2.01
3606 5089 4.042809 TGGGATGTTAGTGTCATGGAGTTT 59.957 41.667 0.00 0.00 0.00 2.66
3608 5091 3.181329 TGGGATGTTAGTGTCATGGAGT 58.819 45.455 0.00 0.00 0.00 3.85
3609 5092 3.912496 TGGGATGTTAGTGTCATGGAG 57.088 47.619 0.00 0.00 0.00 3.86
3611 5094 3.955471 ACTTGGGATGTTAGTGTCATGG 58.045 45.455 0.00 0.00 0.00 3.66
3612 5095 4.156556 CCAACTTGGGATGTTAGTGTCATG 59.843 45.833 0.00 0.00 32.67 3.07
3614 5097 3.750371 CCAACTTGGGATGTTAGTGTCA 58.250 45.455 0.00 0.00 32.67 3.58
3615 5098 2.488153 GCCAACTTGGGATGTTAGTGTC 59.512 50.000 9.95 0.00 38.19 3.67
3617 5100 2.513753 TGCCAACTTGGGATGTTAGTG 58.486 47.619 9.95 0.00 38.19 2.74
3618 5101 2.969821 TGCCAACTTGGGATGTTAGT 57.030 45.000 9.95 0.00 38.19 2.24
3625 5108 4.735369 TCTTCTTAAATGCCAACTTGGGA 58.265 39.130 9.95 7.24 43.78 4.37
3626 5109 5.467035 TTCTTCTTAAATGCCAACTTGGG 57.533 39.130 9.95 0.00 38.19 4.12
3627 5110 7.153985 TCATTTCTTCTTAAATGCCAACTTGG 58.846 34.615 3.10 3.10 43.49 3.61
3628 5111 8.084073 TCTCATTTCTTCTTAAATGCCAACTTG 58.916 33.333 4.77 0.00 43.49 3.16
3630 5113 7.576477 GCTCTCATTTCTTCTTAAATGCCAACT 60.576 37.037 4.77 0.00 43.49 3.16
3662 6120 2.005451 CTGGGTTCGAAGCTTGATGAG 58.995 52.381 25.05 9.24 0.00 2.90
3663 6121 1.623311 TCTGGGTTCGAAGCTTGATGA 59.377 47.619 25.05 13.60 0.00 2.92
3667 6125 1.291877 CCGTCTGGGTTCGAAGCTTG 61.292 60.000 25.05 17.66 0.00 4.01
3704 6171 1.551452 AAGCTCGAGTGGCTAAGAGT 58.449 50.000 15.13 0.00 39.30 3.24
3707 6174 0.723981 GCAAAGCTCGAGTGGCTAAG 59.276 55.000 15.13 3.62 39.30 2.18
3832 6303 9.734620 GCTTGATGAAGTATATGCATGTTTTAA 57.265 29.630 10.16 0.00 0.00 1.52
3833 6304 8.352201 GGCTTGATGAAGTATATGCATGTTTTA 58.648 33.333 10.16 0.00 0.00 1.52
3834 6305 7.147863 TGGCTTGATGAAGTATATGCATGTTTT 60.148 33.333 10.16 0.88 0.00 2.43
3835 6306 6.321945 TGGCTTGATGAAGTATATGCATGTTT 59.678 34.615 10.16 0.00 0.00 2.83
3836 6307 5.829391 TGGCTTGATGAAGTATATGCATGTT 59.171 36.000 10.16 0.00 0.00 2.71
3837 6308 5.240183 GTGGCTTGATGAAGTATATGCATGT 59.760 40.000 10.16 5.06 0.00 3.21
3838 6309 5.335426 GGTGGCTTGATGAAGTATATGCATG 60.335 44.000 10.16 0.00 0.00 4.06
3839 6310 4.763793 GGTGGCTTGATGAAGTATATGCAT 59.236 41.667 3.79 3.79 0.00 3.96
3840 6311 4.136796 GGTGGCTTGATGAAGTATATGCA 58.863 43.478 0.00 0.00 0.00 3.96
3841 6312 4.136796 TGGTGGCTTGATGAAGTATATGC 58.863 43.478 0.00 0.00 0.00 3.14
3842 6313 6.698008 TTTGGTGGCTTGATGAAGTATATG 57.302 37.500 0.00 0.00 0.00 1.78
3843 6314 7.560991 TCAATTTGGTGGCTTGATGAAGTATAT 59.439 33.333 0.00 0.00 0.00 0.86
3844 6315 6.889177 TCAATTTGGTGGCTTGATGAAGTATA 59.111 34.615 0.00 0.00 0.00 1.47
3877 6348 2.070028 GTGTGTGTGTGTGTGTGTGTA 58.930 47.619 0.00 0.00 0.00 2.90
3881 6354 1.093972 ATGGTGTGTGTGTGTGTGTG 58.906 50.000 0.00 0.00 0.00 3.82
3894 6367 8.730680 GTCAGAAAATAAGACATGTTATGGTGT 58.269 33.333 0.00 0.00 32.68 4.16
3898 6371 9.994432 GAAGGTCAGAAAATAAGACATGTTATG 57.006 33.333 0.00 0.00 34.04 1.90
3899 6372 9.739276 TGAAGGTCAGAAAATAAGACATGTTAT 57.261 29.630 0.00 0.00 34.04 1.89
3900 6373 8.999431 GTGAAGGTCAGAAAATAAGACATGTTA 58.001 33.333 0.00 0.00 34.04 2.41
3901 6374 7.502226 TGTGAAGGTCAGAAAATAAGACATGTT 59.498 33.333 0.00 0.00 34.04 2.71
3902 6375 6.998074 TGTGAAGGTCAGAAAATAAGACATGT 59.002 34.615 0.00 0.00 34.04 3.21
3903 6376 7.439157 TGTGAAGGTCAGAAAATAAGACATG 57.561 36.000 0.00 0.00 34.04 3.21
3904 6377 8.463930 TTTGTGAAGGTCAGAAAATAAGACAT 57.536 30.769 0.00 0.00 36.81 3.06
3905 6378 7.873719 TTTGTGAAGGTCAGAAAATAAGACA 57.126 32.000 0.00 0.00 36.81 3.41
3906 6379 8.567948 TCATTTGTGAAGGTCAGAAAATAAGAC 58.432 33.333 4.87 0.00 41.85 3.01
3907 6380 8.690203 TCATTTGTGAAGGTCAGAAAATAAGA 57.310 30.769 4.87 0.25 41.85 2.10
3908 6381 9.918630 AATCATTTGTGAAGGTCAGAAAATAAG 57.081 29.630 4.87 0.00 41.85 1.73
3910 6383 9.695526 CAAATCATTTGTGAAGGTCAGAAAATA 57.304 29.630 1.53 0.00 41.85 1.40
3911 6384 8.423349 TCAAATCATTTGTGAAGGTCAGAAAAT 58.577 29.630 9.98 0.32 41.85 1.82
3912 6385 7.780064 TCAAATCATTTGTGAAGGTCAGAAAA 58.220 30.769 9.98 0.00 41.85 2.29
3913 6386 7.345422 TCAAATCATTTGTGAAGGTCAGAAA 57.655 32.000 9.98 3.40 42.56 2.52
3914 6387 6.515531 GCTCAAATCATTTGTGAAGGTCAGAA 60.516 38.462 14.97 0.00 41.36 3.02
3915 6388 5.048504 GCTCAAATCATTTGTGAAGGTCAGA 60.049 40.000 14.97 0.00 41.36 3.27
3916 6389 5.159209 GCTCAAATCATTTGTGAAGGTCAG 58.841 41.667 14.97 2.30 41.36 3.51
3917 6390 4.583907 TGCTCAAATCATTTGTGAAGGTCA 59.416 37.500 14.97 1.85 41.36 4.02
3918 6391 5.048504 TCTGCTCAAATCATTTGTGAAGGTC 60.049 40.000 16.86 1.51 39.28 3.85
3919 6392 4.828939 TCTGCTCAAATCATTTGTGAAGGT 59.171 37.500 16.86 0.00 39.28 3.50
3920 6393 5.381174 TCTGCTCAAATCATTTGTGAAGG 57.619 39.130 16.86 6.70 39.28 3.46
3921 6394 7.648112 CCATATCTGCTCAAATCATTTGTGAAG 59.352 37.037 14.97 13.65 39.86 3.02
3922 6395 7.417003 CCCATATCTGCTCAAATCATTTGTGAA 60.417 37.037 14.97 4.70 41.36 3.18
3923 6396 6.040054 CCCATATCTGCTCAAATCATTTGTGA 59.960 38.462 14.97 7.93 41.36 3.58
3924 6397 6.183360 ACCCATATCTGCTCAAATCATTTGTG 60.183 38.462 9.98 8.76 41.36 3.33
3925 6398 5.895534 ACCCATATCTGCTCAAATCATTTGT 59.104 36.000 9.98 0.00 41.36 2.83
3926 6399 6.401047 ACCCATATCTGCTCAAATCATTTG 57.599 37.500 3.46 3.46 41.96 2.32
3927 6400 9.986157 ATATACCCATATCTGCTCAAATCATTT 57.014 29.630 0.00 0.00 0.00 2.32
3928 6401 9.624373 GATATACCCATATCTGCTCAAATCATT 57.376 33.333 0.00 0.00 39.92 2.57
3966 6439 9.736023 GACTTTTCAAATGTTTCAGACTTGTAT 57.264 29.630 0.00 0.00 0.00 2.29
3967 6440 8.188139 GGACTTTTCAAATGTTTCAGACTTGTA 58.812 33.333 0.00 0.00 0.00 2.41
3968 6441 7.035612 GGACTTTTCAAATGTTTCAGACTTGT 58.964 34.615 0.00 0.00 0.00 3.16
3969 6442 7.035004 TGGACTTTTCAAATGTTTCAGACTTG 58.965 34.615 0.00 0.00 0.00 3.16
3970 6443 7.169158 TGGACTTTTCAAATGTTTCAGACTT 57.831 32.000 0.00 0.00 0.00 3.01
3971 6444 6.773976 TGGACTTTTCAAATGTTTCAGACT 57.226 33.333 0.00 0.00 0.00 3.24
3972 6445 7.330700 TGTTTGGACTTTTCAAATGTTTCAGAC 59.669 33.333 0.00 0.50 36.64 3.51
3973 6446 7.382110 TGTTTGGACTTTTCAAATGTTTCAGA 58.618 30.769 0.00 0.00 36.64 3.27
3974 6447 7.593875 TGTTTGGACTTTTCAAATGTTTCAG 57.406 32.000 0.00 0.00 36.64 3.02
3975 6448 7.969536 TTGTTTGGACTTTTCAAATGTTTCA 57.030 28.000 0.00 0.00 36.64 2.69
3976 6449 9.838975 AAATTGTTTGGACTTTTCAAATGTTTC 57.161 25.926 0.00 0.00 36.64 2.78
3977 6450 9.838975 GAAATTGTTTGGACTTTTCAAATGTTT 57.161 25.926 0.00 0.00 36.64 2.83
3978 6451 9.007901 TGAAATTGTTTGGACTTTTCAAATGTT 57.992 25.926 0.00 0.00 36.54 2.71
3979 6452 8.558973 TGAAATTGTTTGGACTTTTCAAATGT 57.441 26.923 0.00 0.00 36.54 2.71
3980 6453 8.881743 TCTGAAATTGTTTGGACTTTTCAAATG 58.118 29.630 0.00 0.00 37.73 2.32
3981 6454 9.101655 CTCTGAAATTGTTTGGACTTTTCAAAT 57.898 29.630 0.00 0.00 37.73 2.32
3982 6455 8.093927 ACTCTGAAATTGTTTGGACTTTTCAAA 58.906 29.630 0.00 0.00 37.73 2.69
3983 6456 7.545265 CACTCTGAAATTGTTTGGACTTTTCAA 59.455 33.333 0.00 0.00 37.73 2.69
3984 6457 7.035004 CACTCTGAAATTGTTTGGACTTTTCA 58.965 34.615 0.00 0.00 36.82 2.69
3985 6458 7.257722 TCACTCTGAAATTGTTTGGACTTTTC 58.742 34.615 0.00 0.00 33.26 2.29
3986 6459 7.169158 TCACTCTGAAATTGTTTGGACTTTT 57.831 32.000 0.00 0.00 0.00 2.27
3987 6460 6.773976 TCACTCTGAAATTGTTTGGACTTT 57.226 33.333 0.00 0.00 0.00 2.66
3988 6461 6.378280 ACTTCACTCTGAAATTGTTTGGACTT 59.622 34.615 0.00 0.00 35.73 3.01
3989 6462 5.888161 ACTTCACTCTGAAATTGTTTGGACT 59.112 36.000 0.00 0.00 35.73 3.85
3990 6463 5.973565 CACTTCACTCTGAAATTGTTTGGAC 59.026 40.000 0.00 0.00 35.73 4.02
3991 6464 5.067674 CCACTTCACTCTGAAATTGTTTGGA 59.932 40.000 0.00 0.00 35.73 3.53
3992 6465 5.067674 TCCACTTCACTCTGAAATTGTTTGG 59.932 40.000 0.00 0.00 35.73 3.28
3993 6466 6.038603 TCTCCACTTCACTCTGAAATTGTTTG 59.961 38.462 0.00 0.00 35.73 2.93
3994 6467 6.122277 TCTCCACTTCACTCTGAAATTGTTT 58.878 36.000 0.00 0.00 35.73 2.83
3995 6468 5.684704 TCTCCACTTCACTCTGAAATTGTT 58.315 37.500 0.00 0.00 35.73 2.83
3996 6469 5.296151 TCTCCACTTCACTCTGAAATTGT 57.704 39.130 0.00 0.00 35.73 2.71
3997 6470 6.814506 ATTCTCCACTTCACTCTGAAATTG 57.185 37.500 0.00 0.00 35.73 2.32
3998 6471 9.171877 GATTATTCTCCACTTCACTCTGAAATT 57.828 33.333 0.00 0.00 35.73 1.82
3999 6472 7.493971 CGATTATTCTCCACTTCACTCTGAAAT 59.506 37.037 0.00 0.00 35.73 2.17
4000 6473 6.813649 CGATTATTCTCCACTTCACTCTGAAA 59.186 38.462 0.00 0.00 35.73 2.69
4001 6474 6.071334 ACGATTATTCTCCACTTCACTCTGAA 60.071 38.462 0.00 0.00 34.79 3.02
4002 6475 5.419155 ACGATTATTCTCCACTTCACTCTGA 59.581 40.000 0.00 0.00 0.00 3.27
4003 6476 5.655488 ACGATTATTCTCCACTTCACTCTG 58.345 41.667 0.00 0.00 0.00 3.35
4004 6477 5.923733 ACGATTATTCTCCACTTCACTCT 57.076 39.130 0.00 0.00 0.00 3.24
4005 6478 7.033791 TGTTACGATTATTCTCCACTTCACTC 58.966 38.462 0.00 0.00 0.00 3.51
4006 6479 6.931838 TGTTACGATTATTCTCCACTTCACT 58.068 36.000 0.00 0.00 0.00 3.41
4007 6480 7.544566 TCTTGTTACGATTATTCTCCACTTCAC 59.455 37.037 0.00 0.00 0.00 3.18
4008 6481 7.608153 TCTTGTTACGATTATTCTCCACTTCA 58.392 34.615 0.00 0.00 0.00 3.02
4009 6482 8.475331 TTCTTGTTACGATTATTCTCCACTTC 57.525 34.615 0.00 0.00 0.00 3.01
4010 6483 8.842358 TTTCTTGTTACGATTATTCTCCACTT 57.158 30.769 0.00 0.00 0.00 3.16
4011 6484 8.842358 TTTTCTTGTTACGATTATTCTCCACT 57.158 30.769 0.00 0.00 0.00 4.00
4028 6501 8.440833 CGGATCGTAGAAACTTTATTTTCTTGT 58.559 33.333 3.59 0.00 42.09 3.16
4029 6502 8.653338 TCGGATCGTAGAAACTTTATTTTCTTG 58.347 33.333 3.59 0.00 42.09 3.02
4030 6503 8.654215 GTCGGATCGTAGAAACTTTATTTTCTT 58.346 33.333 3.59 0.00 42.09 2.52
4031 6504 7.277319 GGTCGGATCGTAGAAACTTTATTTTCT 59.723 37.037 3.75 3.75 45.73 2.52
4032 6505 7.063780 TGGTCGGATCGTAGAAACTTTATTTTC 59.936 37.037 0.00 0.00 43.58 2.29
4033 6506 6.875195 TGGTCGGATCGTAGAAACTTTATTTT 59.125 34.615 0.00 0.00 43.58 1.82
4034 6507 6.400568 TGGTCGGATCGTAGAAACTTTATTT 58.599 36.000 0.00 0.00 43.58 1.40
4035 6508 5.969423 TGGTCGGATCGTAGAAACTTTATT 58.031 37.500 0.00 0.00 43.58 1.40
4036 6509 5.587388 TGGTCGGATCGTAGAAACTTTAT 57.413 39.130 0.00 0.00 43.58 1.40
4037 6510 5.125900 TCATGGTCGGATCGTAGAAACTTTA 59.874 40.000 0.00 0.00 43.58 1.85
4038 6511 3.947910 TGGTCGGATCGTAGAAACTTT 57.052 42.857 0.00 0.00 43.58 2.66
4039 6512 3.446161 TCATGGTCGGATCGTAGAAACTT 59.554 43.478 0.00 0.00 43.58 2.66
4040 6513 3.021695 TCATGGTCGGATCGTAGAAACT 58.978 45.455 0.00 0.00 43.58 2.66
4041 6514 3.431922 TCATGGTCGGATCGTAGAAAC 57.568 47.619 0.00 0.00 43.58 2.78
4042 6515 3.181479 CCTTCATGGTCGGATCGTAGAAA 60.181 47.826 0.00 0.00 43.58 2.52
4043 6516 2.361119 CCTTCATGGTCGGATCGTAGAA 59.639 50.000 0.00 0.00 43.58 2.10
4044 6517 1.954382 CCTTCATGGTCGGATCGTAGA 59.046 52.381 0.00 0.00 45.75 2.59
4045 6518 1.603172 GCCTTCATGGTCGGATCGTAG 60.603 57.143 0.00 0.00 38.35 3.51
4046 6519 0.387929 GCCTTCATGGTCGGATCGTA 59.612 55.000 0.00 0.00 38.35 3.43
4047 6520 1.144057 GCCTTCATGGTCGGATCGT 59.856 57.895 0.00 0.00 38.35 3.73
4048 6521 1.951130 CGCCTTCATGGTCGGATCG 60.951 63.158 0.00 0.00 38.35 3.69
4049 6522 0.179084 TTCGCCTTCATGGTCGGATC 60.179 55.000 0.00 0.00 38.35 3.36
4050 6523 0.469917 ATTCGCCTTCATGGTCGGAT 59.530 50.000 0.00 0.00 38.35 4.18
4051 6524 1.116308 TATTCGCCTTCATGGTCGGA 58.884 50.000 0.00 0.00 38.35 4.55
4052 6525 2.169832 ATATTCGCCTTCATGGTCGG 57.830 50.000 0.00 0.00 38.35 4.79
4053 6526 3.559655 TCAAATATTCGCCTTCATGGTCG 59.440 43.478 0.00 0.00 38.35 4.79
4054 6527 4.576463 ACTCAAATATTCGCCTTCATGGTC 59.424 41.667 0.00 0.00 38.35 4.02
4055 6528 4.526970 ACTCAAATATTCGCCTTCATGGT 58.473 39.130 0.00 0.00 38.35 3.55
4056 6529 5.505173 AACTCAAATATTCGCCTTCATGG 57.495 39.130 0.00 0.00 39.35 3.66
4057 6530 6.019075 TCGTAACTCAAATATTCGCCTTCATG 60.019 38.462 0.00 0.00 0.00 3.07
4058 6531 6.046593 TCGTAACTCAAATATTCGCCTTCAT 58.953 36.000 0.00 0.00 0.00 2.57
4059 6532 5.412640 TCGTAACTCAAATATTCGCCTTCA 58.587 37.500 0.00 0.00 0.00 3.02
4060 6533 5.519206 ACTCGTAACTCAAATATTCGCCTTC 59.481 40.000 0.00 0.00 0.00 3.46
4061 6534 5.416947 ACTCGTAACTCAAATATTCGCCTT 58.583 37.500 0.00 0.00 0.00 4.35
4062 6535 5.007385 ACTCGTAACTCAAATATTCGCCT 57.993 39.130 0.00 0.00 0.00 5.52
4063 6536 5.713822 AACTCGTAACTCAAATATTCGCC 57.286 39.130 0.00 0.00 0.00 5.54
4064 6537 5.957796 CCAAACTCGTAACTCAAATATTCGC 59.042 40.000 0.00 0.00 0.00 4.70
4065 6538 5.957796 GCCAAACTCGTAACTCAAATATTCG 59.042 40.000 0.00 0.00 0.00 3.34
4066 6539 6.093633 AGGCCAAACTCGTAACTCAAATATTC 59.906 38.462 5.01 0.00 0.00 1.75
4067 6540 5.944007 AGGCCAAACTCGTAACTCAAATATT 59.056 36.000 5.01 0.00 0.00 1.28
4068 6541 5.497474 AGGCCAAACTCGTAACTCAAATAT 58.503 37.500 5.01 0.00 0.00 1.28
4069 6542 4.901868 AGGCCAAACTCGTAACTCAAATA 58.098 39.130 5.01 0.00 0.00 1.40
4070 6543 3.751518 AGGCCAAACTCGTAACTCAAAT 58.248 40.909 5.01 0.00 0.00 2.32
4071 6544 3.202829 AGGCCAAACTCGTAACTCAAA 57.797 42.857 5.01 0.00 0.00 2.69
4072 6545 2.922740 AGGCCAAACTCGTAACTCAA 57.077 45.000 5.01 0.00 0.00 3.02
4073 6546 2.103432 TGAAGGCCAAACTCGTAACTCA 59.897 45.455 5.01 0.00 0.00 3.41
4074 6547 2.762745 TGAAGGCCAAACTCGTAACTC 58.237 47.619 5.01 0.00 0.00 3.01
4075 6548 2.922740 TGAAGGCCAAACTCGTAACT 57.077 45.000 5.01 0.00 0.00 2.24
4076 6549 4.499037 AAATGAAGGCCAAACTCGTAAC 57.501 40.909 5.01 0.00 0.00 2.50
4077 6550 6.636562 TTTAAATGAAGGCCAAACTCGTAA 57.363 33.333 5.01 0.00 0.00 3.18
4078 6551 6.039493 TGTTTTAAATGAAGGCCAAACTCGTA 59.961 34.615 5.01 0.00 0.00 3.43
4079 6552 5.163499 TGTTTTAAATGAAGGCCAAACTCGT 60.163 36.000 5.01 0.00 0.00 4.18
4080 6553 5.285651 TGTTTTAAATGAAGGCCAAACTCG 58.714 37.500 5.01 0.00 0.00 4.18
4081 6554 7.226523 ACATTGTTTTAAATGAAGGCCAAACTC 59.773 33.333 5.01 0.00 39.46 3.01
4082 6555 7.053498 ACATTGTTTTAAATGAAGGCCAAACT 58.947 30.769 5.01 0.00 39.46 2.66
4083 6556 7.011857 TGACATTGTTTTAAATGAAGGCCAAAC 59.988 33.333 5.01 4.71 39.46 2.93
4084 6557 7.050377 TGACATTGTTTTAAATGAAGGCCAAA 58.950 30.769 5.01 0.00 39.46 3.28
4085 6558 6.586344 TGACATTGTTTTAAATGAAGGCCAA 58.414 32.000 5.01 0.00 39.46 4.52
4086 6559 6.166984 TGACATTGTTTTAAATGAAGGCCA 57.833 33.333 5.01 0.00 39.46 5.36
4087 6560 7.489574 TTTGACATTGTTTTAAATGAAGGCC 57.510 32.000 0.00 0.00 39.46 5.19
4088 6561 8.772705 TGATTTGACATTGTTTTAAATGAAGGC 58.227 29.630 4.04 0.00 39.46 4.35
4098 6571 9.165035 AGTTGTGAAATGATTTGACATTGTTTT 57.835 25.926 10.82 0.00 36.67 2.43
4099 6572 8.721019 AGTTGTGAAATGATTTGACATTGTTT 57.279 26.923 10.82 0.00 36.67 2.83
4100 6573 7.980662 TGAGTTGTGAAATGATTTGACATTGTT 59.019 29.630 10.82 0.00 36.67 2.83
4101 6574 7.436080 GTGAGTTGTGAAATGATTTGACATTGT 59.564 33.333 10.82 0.00 36.67 2.71
4102 6575 7.357777 CGTGAGTTGTGAAATGATTTGACATTG 60.358 37.037 10.82 0.00 36.67 2.82
4103 6576 6.638063 CGTGAGTTGTGAAATGATTTGACATT 59.362 34.615 10.82 3.35 36.67 2.71
4104 6577 6.144854 CGTGAGTTGTGAAATGATTTGACAT 58.855 36.000 10.82 0.00 36.67 3.06
4105 6578 5.065859 ACGTGAGTTGTGAAATGATTTGACA 59.934 36.000 6.10 6.10 46.40 3.58
4106 6579 5.510671 ACGTGAGTTGTGAAATGATTTGAC 58.489 37.500 0.39 0.39 46.40 3.18
4107 6580 5.749596 ACGTGAGTTGTGAAATGATTTGA 57.250 34.783 0.00 0.00 46.40 2.69
4123 6596 0.600255 GGTGTTCCAGGTGACGTGAG 60.600 60.000 6.88 0.00 0.00 3.51
4124 6597 1.331399 TGGTGTTCCAGGTGACGTGA 61.331 55.000 6.88 0.00 39.03 4.35
4125 6598 1.145156 TGGTGTTCCAGGTGACGTG 59.855 57.895 0.00 0.00 39.03 4.49
4126 6599 1.145377 GTGGTGTTCCAGGTGACGT 59.855 57.895 0.00 0.00 45.24 4.34
4127 6600 0.462937 TTGTGGTGTTCCAGGTGACG 60.463 55.000 0.00 0.00 45.24 4.35
4128 6601 1.021968 GTTGTGGTGTTCCAGGTGAC 58.978 55.000 0.00 0.00 45.24 3.67
4129 6602 0.462937 CGTTGTGGTGTTCCAGGTGA 60.463 55.000 0.00 0.00 45.24 4.02
4130 6603 0.746563 ACGTTGTGGTGTTCCAGGTG 60.747 55.000 0.00 0.00 45.24 4.00
4131 6604 0.831966 TACGTTGTGGTGTTCCAGGT 59.168 50.000 0.00 0.00 45.24 4.00
4132 6605 1.956297 TTACGTTGTGGTGTTCCAGG 58.044 50.000 0.00 0.00 45.24 4.45
4133 6606 2.225491 CCATTACGTTGTGGTGTTCCAG 59.775 50.000 9.96 0.00 45.24 3.86
4134 6607 2.222886 CCATTACGTTGTGGTGTTCCA 58.777 47.619 9.96 0.00 42.05 3.53
4135 6608 2.223745 ACCATTACGTTGTGGTGTTCC 58.776 47.619 19.90 0.00 46.55 3.62
4141 6614 1.533731 GGACACACCATTACGTTGTGG 59.466 52.381 18.65 16.89 41.35 4.17
4142 6615 2.214347 TGGACACACCATTACGTTGTG 58.786 47.619 14.21 14.21 44.64 3.33
4143 6616 2.623878 TGGACACACCATTACGTTGT 57.376 45.000 0.00 0.00 44.64 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.