Multiple sequence alignment - TraesCS3A01G291800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G291800 chr3A 100.000 2341 0 0 1 2341 522055776 522058116 0.000000e+00 4324.0
1 TraesCS3A01G291800 chr3D 92.916 1694 67 20 676 2341 401672471 401674139 0.000000e+00 2414.0
2 TraesCS3A01G291800 chr3B 92.491 1678 97 13 683 2341 527232920 527234587 0.000000e+00 2374.0
3 TraesCS3A01G291800 chr3B 82.222 90 12 4 50 137 21909108 21909021 8.970000e-10 75.0
4 TraesCS3A01G291800 chr3B 80.412 97 15 4 45 139 448845870 448845776 1.160000e-08 71.3
5 TraesCS3A01G291800 chr3B 100.000 28 0 0 111 138 191131588 191131615 4.000000e-03 52.8
6 TraesCS3A01G291800 chr1A 95.420 262 12 0 1495 1756 276123959 276123698 3.600000e-113 418.0
7 TraesCS3A01G291800 chr1A 91.525 118 10 0 1231 1348 276124072 276123955 1.860000e-36 163.0
8 TraesCS3A01G291800 chr1A 94.286 105 4 2 331 434 565354867 565354970 2.410000e-35 159.0
9 TraesCS3A01G291800 chr5B 94.275 262 15 0 1495 1756 664222988 664222727 3.620000e-108 401.0
10 TraesCS3A01G291800 chr5B 84.163 221 32 3 978 1197 14194486 14194268 6.550000e-51 211.0
11 TraesCS3A01G291800 chr5B 91.150 113 10 0 1236 1348 664223096 664222984 1.120000e-33 154.0
12 TraesCS3A01G291800 chr5B 88.710 124 7 6 309 429 478325091 478325210 6.740000e-31 145.0
13 TraesCS3A01G291800 chr5B 83.929 112 15 3 1949 2057 14193627 14193516 1.140000e-18 104.0
14 TraesCS3A01G291800 chr5B 88.889 54 2 3 86 137 411935238 411935187 1.940000e-06 63.9
15 TraesCS3A01G291800 chr5A 89.922 129 6 6 309 434 436885129 436885253 2.410000e-35 159.0
16 TraesCS3A01G291800 chr5A 90.179 112 7 3 326 434 645397344 645397454 2.420000e-30 143.0
17 TraesCS3A01G291800 chr5A 100.000 29 0 0 111 139 353193827 353193799 1.000000e-03 54.7
18 TraesCS3A01G291800 chr6D 89.147 129 7 6 309 434 15372697 15372821 1.120000e-33 154.0
19 TraesCS3A01G291800 chr6D 90.476 105 8 2 331 434 444471196 444471093 1.130000e-28 137.0
20 TraesCS3A01G291800 chr7A 91.429 105 7 2 331 434 435004060 435003957 2.420000e-30 143.0
21 TraesCS3A01G291800 chr6B 91.509 106 5 4 331 434 248353949 248354052 2.420000e-30 143.0
22 TraesCS3A01G291800 chr4A 91.429 105 6 3 331 434 738809204 738809102 8.720000e-30 141.0
23 TraesCS3A01G291800 chr7B 87.037 54 5 2 86 138 709349190 709349138 2.510000e-05 60.2
24 TraesCS3A01G291800 chr4D 94.444 36 1 1 111 146 14438774 14438740 1.000000e-03 54.7
25 TraesCS3A01G291800 chr2B 77.551 98 16 5 45 138 733042781 733042876 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G291800 chr3A 522055776 522058116 2340 False 4324 4324 100.000 1 2341 1 chr3A.!!$F1 2340
1 TraesCS3A01G291800 chr3D 401672471 401674139 1668 False 2414 2414 92.916 676 2341 1 chr3D.!!$F1 1665
2 TraesCS3A01G291800 chr3B 527232920 527234587 1667 False 2374 2374 92.491 683 2341 1 chr3B.!!$F2 1658

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
751 752 0.035458 CCCTGCCCCTCGCTTTATAG 59.965 60.0 0.0 0.0 38.78 1.31 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2090 2120 1.368209 CTTGCACATGCCTTTGCCA 59.632 52.632 0.49 0.0 41.18 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.277756 GCGTGCTCGTACCTACCG 60.278 66.667 10.18 0.00 39.49 4.02
18 19 3.044059 GCGTGCTCGTACCTACCGT 62.044 63.158 10.18 0.00 39.49 4.83
19 20 1.061570 CGTGCTCGTACCTACCGTC 59.938 63.158 0.00 0.00 0.00 4.79
20 21 1.638388 CGTGCTCGTACCTACCGTCA 61.638 60.000 0.00 0.00 0.00 4.35
21 22 0.523072 GTGCTCGTACCTACCGTCAA 59.477 55.000 0.00 0.00 0.00 3.18
22 23 1.068333 GTGCTCGTACCTACCGTCAAA 60.068 52.381 0.00 0.00 0.00 2.69
23 24 1.612950 TGCTCGTACCTACCGTCAAAA 59.387 47.619 0.00 0.00 0.00 2.44
24 25 2.035704 TGCTCGTACCTACCGTCAAAAA 59.964 45.455 0.00 0.00 0.00 1.94
25 26 2.409715 GCTCGTACCTACCGTCAAAAAC 59.590 50.000 0.00 0.00 0.00 2.43
26 27 3.858503 GCTCGTACCTACCGTCAAAAACT 60.859 47.826 0.00 0.00 0.00 2.66
27 28 4.301628 CTCGTACCTACCGTCAAAAACTT 58.698 43.478 0.00 0.00 0.00 2.66
28 29 4.692228 TCGTACCTACCGTCAAAAACTTT 58.308 39.130 0.00 0.00 0.00 2.66
29 30 4.507388 TCGTACCTACCGTCAAAAACTTTG 59.493 41.667 0.00 0.00 0.00 2.77
30 31 4.507388 CGTACCTACCGTCAAAAACTTTGA 59.493 41.667 0.00 0.00 0.00 2.69
31 32 5.178067 CGTACCTACCGTCAAAAACTTTGAT 59.822 40.000 5.20 0.00 0.00 2.57
32 33 5.432885 ACCTACCGTCAAAAACTTTGATG 57.567 39.130 12.42 12.42 35.72 3.07
37 38 4.794169 CCGTCAAAAACTTTGATGGTAGG 58.206 43.478 23.52 11.48 45.81 3.18
38 39 4.320935 CCGTCAAAAACTTTGATGGTAGGG 60.321 45.833 23.52 7.00 45.81 3.53
39 40 4.277423 CGTCAAAAACTTTGATGGTAGGGT 59.723 41.667 11.77 0.00 33.12 4.34
40 41 5.221165 CGTCAAAAACTTTGATGGTAGGGTT 60.221 40.000 11.77 0.00 33.12 4.11
41 42 5.983118 GTCAAAAACTTTGATGGTAGGGTTG 59.017 40.000 5.20 0.00 0.00 3.77
42 43 5.659079 TCAAAAACTTTGATGGTAGGGTTGT 59.341 36.000 0.00 0.00 0.00 3.32
43 44 5.529581 AAAACTTTGATGGTAGGGTTGTG 57.470 39.130 0.00 0.00 0.00 3.33
44 45 3.154827 ACTTTGATGGTAGGGTTGTGG 57.845 47.619 0.00 0.00 0.00 4.17
45 46 2.225017 ACTTTGATGGTAGGGTTGTGGG 60.225 50.000 0.00 0.00 0.00 4.61
46 47 0.039035 TTGATGGTAGGGTTGTGGGC 59.961 55.000 0.00 0.00 0.00 5.36
47 48 1.451387 GATGGTAGGGTTGTGGGCG 60.451 63.158 0.00 0.00 0.00 6.13
48 49 2.886730 GATGGTAGGGTTGTGGGCGG 62.887 65.000 0.00 0.00 0.00 6.13
49 50 3.643554 GGTAGGGTTGTGGGCGGT 61.644 66.667 0.00 0.00 0.00 5.68
50 51 2.292559 GGTAGGGTTGTGGGCGGTA 61.293 63.158 0.00 0.00 0.00 4.02
51 52 1.219935 GTAGGGTTGTGGGCGGTAG 59.780 63.158 0.00 0.00 0.00 3.18
52 53 2.662070 TAGGGTTGTGGGCGGTAGC 61.662 63.158 0.00 0.00 44.18 3.58
67 68 5.993106 GCGGTAGCAAAAAGATTAGATCT 57.007 39.130 0.00 0.00 44.35 2.75
68 69 5.980025 GCGGTAGCAAAAAGATTAGATCTC 58.020 41.667 0.00 0.00 44.35 2.75
69 70 5.332656 GCGGTAGCAAAAAGATTAGATCTCG 60.333 44.000 0.00 0.00 44.35 4.04
70 71 5.977725 CGGTAGCAAAAAGATTAGATCTCGA 59.022 40.000 0.00 0.00 39.08 4.04
71 72 6.642950 CGGTAGCAAAAAGATTAGATCTCGAT 59.357 38.462 0.00 0.00 39.08 3.59
72 73 7.169982 CGGTAGCAAAAAGATTAGATCTCGATT 59.830 37.037 0.00 0.00 39.08 3.34
73 74 8.831550 GGTAGCAAAAAGATTAGATCTCGATTT 58.168 33.333 0.00 0.00 39.08 2.17
98 99 7.889873 TTTTTAACTCAGGGTCAAATCTGAA 57.110 32.000 0.00 0.00 39.23 3.02
99 100 7.889873 TTTTAACTCAGGGTCAAATCTGAAA 57.110 32.000 0.00 0.00 39.23 2.69
100 101 8.477419 TTTTAACTCAGGGTCAAATCTGAAAT 57.523 30.769 0.00 0.00 39.23 2.17
101 102 9.581289 TTTTAACTCAGGGTCAAATCTGAAATA 57.419 29.630 0.00 0.00 39.23 1.40
102 103 8.792830 TTAACTCAGGGTCAAATCTGAAATAG 57.207 34.615 0.00 0.00 39.23 1.73
103 104 5.749462 ACTCAGGGTCAAATCTGAAATAGG 58.251 41.667 0.00 0.00 39.23 2.57
104 105 5.251700 ACTCAGGGTCAAATCTGAAATAGGT 59.748 40.000 0.00 0.00 39.23 3.08
105 106 6.139679 TCAGGGTCAAATCTGAAATAGGTT 57.860 37.500 0.00 0.00 37.11 3.50
106 107 6.552008 TCAGGGTCAAATCTGAAATAGGTTT 58.448 36.000 0.00 0.00 40.35 3.27
107 108 6.659242 TCAGGGTCAAATCTGAAATAGGTTTC 59.341 38.462 0.00 0.00 37.63 2.78
108 109 5.648092 AGGGTCAAATCTGAAATAGGTTTCG 59.352 40.000 0.00 0.00 45.34 3.46
118 119 6.753107 TGAAATAGGTTTCGGAAAAGGATC 57.247 37.500 4.46 0.95 45.34 3.36
119 120 6.242396 TGAAATAGGTTTCGGAAAAGGATCA 58.758 36.000 4.46 3.36 45.34 2.92
120 121 6.717540 TGAAATAGGTTTCGGAAAAGGATCAA 59.282 34.615 4.46 0.00 45.34 2.57
121 122 7.231722 TGAAATAGGTTTCGGAAAAGGATCAAA 59.768 33.333 4.46 0.00 45.34 2.69
122 123 7.533289 AATAGGTTTCGGAAAAGGATCAAAA 57.467 32.000 4.46 0.00 0.00 2.44
123 124 5.196341 AGGTTTCGGAAAAGGATCAAAAC 57.804 39.130 4.46 0.00 0.00 2.43
124 125 4.647399 AGGTTTCGGAAAAGGATCAAAACA 59.353 37.500 4.46 0.00 32.51 2.83
125 126 4.743151 GGTTTCGGAAAAGGATCAAAACAC 59.257 41.667 4.46 0.00 32.51 3.32
126 127 3.889196 TCGGAAAAGGATCAAAACACG 57.111 42.857 0.00 0.00 0.00 4.49
127 128 3.468770 TCGGAAAAGGATCAAAACACGA 58.531 40.909 0.00 0.00 0.00 4.35
128 129 3.878103 TCGGAAAAGGATCAAAACACGAA 59.122 39.130 0.00 0.00 0.00 3.85
129 130 4.335874 TCGGAAAAGGATCAAAACACGAAA 59.664 37.500 0.00 0.00 0.00 3.46
130 131 5.009210 TCGGAAAAGGATCAAAACACGAAAT 59.991 36.000 0.00 0.00 0.00 2.17
131 132 5.689961 CGGAAAAGGATCAAAACACGAAATT 59.310 36.000 0.00 0.00 0.00 1.82
132 133 6.200097 CGGAAAAGGATCAAAACACGAAATTT 59.800 34.615 0.00 0.00 0.00 1.82
133 134 7.254286 CGGAAAAGGATCAAAACACGAAATTTT 60.254 33.333 0.00 0.00 0.00 1.82
134 135 7.850492 GGAAAAGGATCAAAACACGAAATTTTG 59.150 33.333 3.73 3.73 44.74 2.44
135 136 5.905480 AGGATCAAAACACGAAATTTTGC 57.095 34.783 5.27 5.98 43.62 3.68
136 137 4.749598 AGGATCAAAACACGAAATTTTGCC 59.250 37.500 5.27 11.92 43.62 4.52
137 138 4.375908 GGATCAAAACACGAAATTTTGCCG 60.376 41.667 5.27 0.83 43.62 5.69
138 139 2.282820 TCAAAACACGAAATTTTGCCGC 59.717 40.909 5.27 0.00 43.62 6.53
139 140 1.213491 AAACACGAAATTTTGCCGCC 58.787 45.000 5.27 0.00 0.00 6.13
140 141 0.937231 AACACGAAATTTTGCCGCCG 60.937 50.000 5.27 0.00 0.00 6.46
141 142 2.430075 ACGAAATTTTGCCGCCGC 60.430 55.556 5.27 0.00 0.00 6.53
142 143 2.126502 CGAAATTTTGCCGCCGCT 60.127 55.556 0.00 0.00 35.36 5.52
143 144 2.152078 CGAAATTTTGCCGCCGCTC 61.152 57.895 0.00 0.00 35.36 5.03
144 145 2.126502 AAATTTTGCCGCCGCTCG 60.127 55.556 0.00 0.00 35.36 5.03
156 157 3.124921 CGCTCGGTTCGCCCAAAT 61.125 61.111 0.00 0.00 0.00 2.32
157 158 2.791927 GCTCGGTTCGCCCAAATC 59.208 61.111 0.00 0.00 0.00 2.17
158 159 2.038269 GCTCGGTTCGCCCAAATCA 61.038 57.895 0.00 0.00 0.00 2.57
159 160 1.794222 CTCGGTTCGCCCAAATCAC 59.206 57.895 0.00 0.00 0.00 3.06
160 161 0.953471 CTCGGTTCGCCCAAATCACA 60.953 55.000 0.00 0.00 0.00 3.58
161 162 0.322098 TCGGTTCGCCCAAATCACAT 60.322 50.000 0.00 0.00 0.00 3.21
162 163 0.179166 CGGTTCGCCCAAATCACATG 60.179 55.000 0.00 0.00 0.00 3.21
163 164 0.458370 GGTTCGCCCAAATCACATGC 60.458 55.000 0.00 0.00 0.00 4.06
164 165 0.243365 GTTCGCCCAAATCACATGCA 59.757 50.000 0.00 0.00 0.00 3.96
165 166 0.243365 TTCGCCCAAATCACATGCAC 59.757 50.000 0.00 0.00 0.00 4.57
166 167 1.514657 CGCCCAAATCACATGCACG 60.515 57.895 0.00 0.00 0.00 5.34
167 168 1.882311 GCCCAAATCACATGCACGA 59.118 52.632 0.00 0.00 0.00 4.35
168 169 0.457035 GCCCAAATCACATGCACGAT 59.543 50.000 0.00 0.00 0.00 3.73
169 170 1.799917 GCCCAAATCACATGCACGATG 60.800 52.381 0.00 0.00 38.15 3.84
170 171 1.744522 CCCAAATCACATGCACGATGA 59.255 47.619 0.00 0.00 35.80 2.92
171 172 2.164017 CCCAAATCACATGCACGATGAA 59.836 45.455 0.00 0.00 35.80 2.57
172 173 3.431856 CCAAATCACATGCACGATGAAG 58.568 45.455 0.00 0.00 35.80 3.02
173 174 3.119743 CCAAATCACATGCACGATGAAGT 60.120 43.478 0.00 0.00 35.80 3.01
174 175 4.094739 CCAAATCACATGCACGATGAAGTA 59.905 41.667 0.00 0.00 35.80 2.24
175 176 5.220912 CCAAATCACATGCACGATGAAGTAT 60.221 40.000 0.00 0.00 35.80 2.12
176 177 6.260377 CAAATCACATGCACGATGAAGTATT 58.740 36.000 0.00 0.00 35.80 1.89
177 178 6.441093 AATCACATGCACGATGAAGTATTT 57.559 33.333 0.00 0.00 35.80 1.40
178 179 5.220557 TCACATGCACGATGAAGTATTTG 57.779 39.130 0.00 0.00 35.80 2.32
179 180 4.094739 TCACATGCACGATGAAGTATTTGG 59.905 41.667 0.00 0.00 35.80 3.28
180 181 3.378112 ACATGCACGATGAAGTATTTGGG 59.622 43.478 0.00 0.00 35.80 4.12
181 182 3.342377 TGCACGATGAAGTATTTGGGA 57.658 42.857 0.00 0.00 0.00 4.37
182 183 3.884895 TGCACGATGAAGTATTTGGGAT 58.115 40.909 0.00 0.00 0.00 3.85
183 184 5.029807 TGCACGATGAAGTATTTGGGATA 57.970 39.130 0.00 0.00 0.00 2.59
184 185 5.432645 TGCACGATGAAGTATTTGGGATAA 58.567 37.500 0.00 0.00 0.00 1.75
185 186 6.061441 TGCACGATGAAGTATTTGGGATAAT 58.939 36.000 0.00 0.00 0.00 1.28
186 187 6.545666 TGCACGATGAAGTATTTGGGATAATT 59.454 34.615 0.00 0.00 0.00 1.40
187 188 7.717436 TGCACGATGAAGTATTTGGGATAATTA 59.283 33.333 0.00 0.00 0.00 1.40
188 189 8.730680 GCACGATGAAGTATTTGGGATAATTAT 58.269 33.333 0.00 0.00 0.00 1.28
208 209 7.761038 ATTATATTAGCTTTGGTTAGGGTGC 57.239 36.000 0.00 0.00 0.00 5.01
209 210 1.816074 TTAGCTTTGGTTAGGGTGCG 58.184 50.000 0.00 0.00 0.00 5.34
210 211 0.675522 TAGCTTTGGTTAGGGTGCGC 60.676 55.000 0.00 0.00 0.00 6.09
211 212 2.989881 GCTTTGGTTAGGGTGCGCC 61.990 63.158 8.12 8.12 0.00 6.53
212 213 1.602323 CTTTGGTTAGGGTGCGCCA 60.602 57.895 19.98 0.00 36.17 5.69
213 214 1.862602 CTTTGGTTAGGGTGCGCCAC 61.863 60.000 19.98 7.73 36.17 5.01
214 215 2.346284 TTTGGTTAGGGTGCGCCACT 62.346 55.000 19.98 14.98 34.40 4.00
215 216 2.746277 GGTTAGGGTGCGCCACTG 60.746 66.667 19.98 0.00 34.40 3.66
216 217 2.746277 GTTAGGGTGCGCCACTGG 60.746 66.667 19.98 0.00 34.40 4.00
217 218 2.925706 TTAGGGTGCGCCACTGGA 60.926 61.111 19.98 3.94 34.40 3.86
218 219 3.248446 TTAGGGTGCGCCACTGGAC 62.248 63.158 19.98 0.00 34.40 4.02
220 221 4.947147 GGGTGCGCCACTGGACAA 62.947 66.667 19.98 0.00 34.40 3.18
221 222 2.672996 GGTGCGCCACTGGACAAT 60.673 61.111 12.58 0.00 34.40 2.71
222 223 1.376683 GGTGCGCCACTGGACAATA 60.377 57.895 12.58 0.00 34.40 1.90
223 224 1.369091 GGTGCGCCACTGGACAATAG 61.369 60.000 12.58 0.00 34.40 1.73
224 225 0.673644 GTGCGCCACTGGACAATAGT 60.674 55.000 4.18 0.00 0.00 2.12
225 226 0.673333 TGCGCCACTGGACAATAGTG 60.673 55.000 4.18 0.00 43.94 2.74
226 227 1.982073 GCGCCACTGGACAATAGTGC 61.982 60.000 0.00 0.00 43.19 4.40
227 228 0.673333 CGCCACTGGACAATAGTGCA 60.673 55.000 0.00 0.00 44.30 4.57
228 229 1.533625 GCCACTGGACAATAGTGCAA 58.466 50.000 0.00 0.00 45.82 4.08
229 230 1.200020 GCCACTGGACAATAGTGCAAC 59.800 52.381 0.00 0.00 45.82 4.17
230 231 2.503331 CCACTGGACAATAGTGCAACA 58.497 47.619 0.00 0.00 45.82 3.33
231 232 3.084039 CCACTGGACAATAGTGCAACAT 58.916 45.455 0.00 0.00 45.82 2.71
232 233 3.127548 CCACTGGACAATAGTGCAACATC 59.872 47.826 0.00 0.00 45.82 3.06
233 234 3.127548 CACTGGACAATAGTGCAACATCC 59.872 47.826 0.00 0.00 45.82 3.51
234 235 3.244875 ACTGGACAATAGTGCAACATCCA 60.245 43.478 0.00 0.34 45.82 3.41
235 236 3.758023 CTGGACAATAGTGCAACATCCAA 59.242 43.478 0.00 0.00 45.82 3.53
236 237 4.148079 TGGACAATAGTGCAACATCCAAA 58.852 39.130 0.00 0.00 43.50 3.28
237 238 4.218200 TGGACAATAGTGCAACATCCAAAG 59.782 41.667 0.00 0.00 43.50 2.77
238 239 4.458989 GGACAATAGTGCAACATCCAAAGA 59.541 41.667 0.00 0.00 41.43 2.52
239 240 5.048083 GGACAATAGTGCAACATCCAAAGAA 60.048 40.000 0.00 0.00 41.43 2.52
240 241 5.772521 ACAATAGTGCAACATCCAAAGAAC 58.227 37.500 0.00 0.00 41.43 3.01
241 242 5.301551 ACAATAGTGCAACATCCAAAGAACA 59.698 36.000 0.00 0.00 41.43 3.18
242 243 3.715628 AGTGCAACATCCAAAGAACAC 57.284 42.857 0.00 0.00 41.43 3.32
243 244 2.033299 AGTGCAACATCCAAAGAACACG 59.967 45.455 0.00 0.00 41.43 4.49
244 245 2.020720 TGCAACATCCAAAGAACACGT 58.979 42.857 0.00 0.00 0.00 4.49
245 246 2.223456 TGCAACATCCAAAGAACACGTG 60.223 45.455 15.48 15.48 0.00 4.49
246 247 2.032799 GCAACATCCAAAGAACACGTGA 59.967 45.455 25.01 0.00 0.00 4.35
247 248 3.849645 GCAACATCCAAAGAACACGTGAG 60.850 47.826 25.01 0.00 0.00 3.51
248 249 2.494059 ACATCCAAAGAACACGTGAGG 58.506 47.619 25.01 13.16 0.00 3.86
249 250 1.806542 CATCCAAAGAACACGTGAGGG 59.193 52.381 25.01 13.19 43.28 4.30
250 251 1.124780 TCCAAAGAACACGTGAGGGA 58.875 50.000 25.01 15.21 38.45 4.20
251 252 1.697432 TCCAAAGAACACGTGAGGGAT 59.303 47.619 25.01 2.08 38.45 3.85
252 253 1.806542 CCAAAGAACACGTGAGGGATG 59.193 52.381 25.01 14.48 38.45 3.51
253 254 1.806542 CAAAGAACACGTGAGGGATGG 59.193 52.381 25.01 1.93 38.45 3.51
254 255 1.348064 AAGAACACGTGAGGGATGGA 58.652 50.000 25.01 0.00 38.45 3.41
255 256 0.608640 AGAACACGTGAGGGATGGAC 59.391 55.000 25.01 2.50 38.45 4.02
256 257 0.391263 GAACACGTGAGGGATGGACC 60.391 60.000 25.01 0.00 38.45 4.46
265 266 3.043199 GGATGGACCCCCTCCCTA 58.957 66.667 0.00 0.00 38.49 3.53
266 267 1.320512 GGATGGACCCCCTCCCTAA 59.679 63.158 0.00 0.00 38.49 2.69
267 268 0.328158 GGATGGACCCCCTCCCTAAA 60.328 60.000 0.00 0.00 38.49 1.85
268 269 1.603634 GATGGACCCCCTCCCTAAAA 58.396 55.000 0.00 0.00 38.49 1.52
269 270 1.927371 GATGGACCCCCTCCCTAAAAA 59.073 52.381 0.00 0.00 38.49 1.94
270 271 1.078115 TGGACCCCCTCCCTAAAAAC 58.922 55.000 0.00 0.00 38.49 2.43
271 272 1.078115 GGACCCCCTCCCTAAAAACA 58.922 55.000 0.00 0.00 31.83 2.83
272 273 1.430075 GGACCCCCTCCCTAAAAACAA 59.570 52.381 0.00 0.00 31.83 2.83
273 274 2.158279 GGACCCCCTCCCTAAAAACAAA 60.158 50.000 0.00 0.00 31.83 2.83
274 275 3.503412 GGACCCCCTCCCTAAAAACAAAT 60.503 47.826 0.00 0.00 31.83 2.32
275 276 4.164981 GACCCCCTCCCTAAAAACAAATT 58.835 43.478 0.00 0.00 0.00 1.82
276 277 4.572978 ACCCCCTCCCTAAAAACAAATTT 58.427 39.130 0.00 0.00 0.00 1.82
277 278 5.728702 ACCCCCTCCCTAAAAACAAATTTA 58.271 37.500 0.00 0.00 0.00 1.40
278 279 6.151767 ACCCCCTCCCTAAAAACAAATTTAA 58.848 36.000 0.00 0.00 0.00 1.52
279 280 6.795507 ACCCCCTCCCTAAAAACAAATTTAAT 59.204 34.615 0.00 0.00 0.00 1.40
280 281 7.962574 ACCCCCTCCCTAAAAACAAATTTAATA 59.037 33.333 0.00 0.00 0.00 0.98
281 282 8.998814 CCCCCTCCCTAAAAACAAATTTAATAT 58.001 33.333 0.00 0.00 0.00 1.28
283 284 9.744468 CCCTCCCTAAAAACAAATTTAATATCG 57.256 33.333 0.00 0.00 0.00 2.92
294 295 9.900710 AACAAATTTAATATCGTTGTAAGCACA 57.099 25.926 0.00 0.00 32.32 4.57
298 299 9.716507 AATTTAATATCGTTGTAAGCACATGAC 57.283 29.630 0.00 0.00 33.76 3.06
299 300 8.487313 TTTAATATCGTTGTAAGCACATGACT 57.513 30.769 0.00 0.00 33.76 3.41
300 301 6.589830 AATATCGTTGTAAGCACATGACTC 57.410 37.500 0.00 0.00 33.76 3.36
301 302 3.378911 TCGTTGTAAGCACATGACTCA 57.621 42.857 0.00 0.00 33.76 3.41
302 303 3.925379 TCGTTGTAAGCACATGACTCAT 58.075 40.909 0.00 0.00 33.76 2.90
303 304 5.066968 TCGTTGTAAGCACATGACTCATA 57.933 39.130 0.00 0.00 33.76 2.15
304 305 5.660460 TCGTTGTAAGCACATGACTCATAT 58.340 37.500 0.00 0.00 33.76 1.78
305 306 6.801575 TCGTTGTAAGCACATGACTCATATA 58.198 36.000 0.00 0.00 33.76 0.86
306 307 7.433680 TCGTTGTAAGCACATGACTCATATAT 58.566 34.615 0.00 0.00 33.76 0.86
307 308 7.595130 TCGTTGTAAGCACATGACTCATATATC 59.405 37.037 0.00 0.00 33.76 1.63
308 309 7.382218 CGTTGTAAGCACATGACTCATATATCA 59.618 37.037 0.00 0.00 33.76 2.15
309 310 9.212641 GTTGTAAGCACATGACTCATATATCAT 57.787 33.333 0.00 0.00 35.93 2.45
321 322 8.624776 TGACTCATATATCATATACTTCCTGCG 58.375 37.037 0.00 0.00 0.00 5.18
322 323 7.429633 ACTCATATATCATATACTTCCTGCGC 58.570 38.462 0.00 0.00 0.00 6.09
323 324 7.286546 ACTCATATATCATATACTTCCTGCGCT 59.713 37.037 9.73 0.00 0.00 5.92
324 325 8.011844 TCATATATCATATACTTCCTGCGCTT 57.988 34.615 9.73 0.00 0.00 4.68
325 326 8.478066 TCATATATCATATACTTCCTGCGCTTT 58.522 33.333 9.73 0.00 0.00 3.51
326 327 9.102757 CATATATCATATACTTCCTGCGCTTTT 57.897 33.333 9.73 0.00 0.00 2.27
328 329 8.709386 ATATCATATACTTCCTGCGCTTTTAG 57.291 34.615 9.73 3.71 0.00 1.85
329 330 4.750098 TCATATACTTCCTGCGCTTTTAGC 59.250 41.667 9.73 0.00 38.02 3.09
330 331 2.762535 TACTTCCTGCGCTTTTAGCT 57.237 45.000 9.73 0.00 39.60 3.32
331 332 1.160137 ACTTCCTGCGCTTTTAGCTG 58.840 50.000 9.73 0.00 39.60 4.24
333 334 3.987404 CCTGCGCTTTTAGCTGGT 58.013 55.556 9.73 0.00 45.09 4.00
334 335 1.796796 CCTGCGCTTTTAGCTGGTC 59.203 57.895 9.73 0.00 45.09 4.02
335 336 0.955428 CCTGCGCTTTTAGCTGGTCA 60.955 55.000 9.73 0.00 45.09 4.02
336 337 0.874390 CTGCGCTTTTAGCTGGTCAA 59.126 50.000 9.73 0.00 39.60 3.18
337 338 1.266718 CTGCGCTTTTAGCTGGTCAAA 59.733 47.619 9.73 0.00 39.60 2.69
338 339 1.266718 TGCGCTTTTAGCTGGTCAAAG 59.733 47.619 9.73 8.70 39.60 2.77
339 340 1.266989 GCGCTTTTAGCTGGTCAAAGT 59.733 47.619 13.22 0.00 39.60 2.66
340 341 2.665794 GCGCTTTTAGCTGGTCAAAGTC 60.666 50.000 13.22 6.63 39.60 3.01
341 342 2.548057 CGCTTTTAGCTGGTCAAAGTCA 59.452 45.455 13.22 0.00 39.60 3.41
342 343 3.003275 CGCTTTTAGCTGGTCAAAGTCAA 59.997 43.478 13.22 0.00 39.60 3.18
343 344 4.540824 GCTTTTAGCTGGTCAAAGTCAAG 58.459 43.478 13.22 0.00 38.45 3.02
344 345 4.540824 CTTTTAGCTGGTCAAAGTCAAGC 58.459 43.478 0.00 0.00 0.00 4.01
345 346 3.492102 TTAGCTGGTCAAAGTCAAGCT 57.508 42.857 0.00 0.73 35.24 3.74
346 347 2.355010 AGCTGGTCAAAGTCAAGCTT 57.645 45.000 0.00 0.00 39.52 3.74
347 348 9.964038 GCTTTTAGCTGGTCAAAGTCAAGCTTT 62.964 40.741 13.22 0.00 42.08 3.51
348 349 3.820557 AGCTGGTCAAAGTCAAGCTTTA 58.179 40.909 0.00 0.00 44.95 1.85
349 350 4.401925 AGCTGGTCAAAGTCAAGCTTTAT 58.598 39.130 0.00 0.00 44.95 1.40
350 351 5.560724 AGCTGGTCAAAGTCAAGCTTTATA 58.439 37.500 0.00 0.00 44.95 0.98
351 352 6.003950 AGCTGGTCAAAGTCAAGCTTTATAA 58.996 36.000 0.00 0.00 44.95 0.98
352 353 6.490040 AGCTGGTCAAAGTCAAGCTTTATAAA 59.510 34.615 0.00 0.00 44.95 1.40
353 354 6.582672 GCTGGTCAAAGTCAAGCTTTATAAAC 59.417 38.462 0.00 0.00 44.95 2.01
354 355 7.522236 GCTGGTCAAAGTCAAGCTTTATAAACT 60.522 37.037 0.00 0.00 44.95 2.66
355 356 8.232913 TGGTCAAAGTCAAGCTTTATAAACTT 57.767 30.769 0.00 0.00 44.95 2.66
356 357 8.691797 TGGTCAAAGTCAAGCTTTATAAACTTT 58.308 29.630 0.00 5.64 44.95 2.66
409 410 9.237187 ACATACACAATACACAATTCAATACCA 57.763 29.630 0.00 0.00 0.00 3.25
441 442 8.920665 TCATTATTGAATGTGCTTTAAAAACGG 58.079 29.630 0.00 0.00 42.71 4.44
442 443 8.920665 CATTATTGAATGTGCTTTAAAAACGGA 58.079 29.630 0.00 0.00 38.13 4.69
443 444 8.514136 TTATTGAATGTGCTTTAAAAACGGAG 57.486 30.769 0.00 0.00 0.00 4.63
445 446 5.277825 TGAATGTGCTTTAAAAACGGAGTG 58.722 37.500 0.00 0.00 45.00 3.51
446 447 3.701532 TGTGCTTTAAAAACGGAGTGG 57.298 42.857 0.00 0.00 45.00 4.00
447 448 2.359531 TGTGCTTTAAAAACGGAGTGGG 59.640 45.455 0.00 0.00 45.00 4.61
448 449 2.359848 GTGCTTTAAAAACGGAGTGGGT 59.640 45.455 0.00 0.00 45.00 4.51
449 450 3.565063 GTGCTTTAAAAACGGAGTGGGTA 59.435 43.478 0.00 0.00 45.00 3.69
450 451 3.565063 TGCTTTAAAAACGGAGTGGGTAC 59.435 43.478 0.00 0.00 45.00 3.34
451 452 3.565063 GCTTTAAAAACGGAGTGGGTACA 59.435 43.478 0.00 0.00 45.00 2.90
452 453 4.036616 GCTTTAAAAACGGAGTGGGTACAA 59.963 41.667 0.00 0.00 45.00 2.41
453 454 5.450274 GCTTTAAAAACGGAGTGGGTACAAA 60.450 40.000 0.00 0.00 45.00 2.83
454 455 6.521151 TTTAAAAACGGAGTGGGTACAAAA 57.479 33.333 0.00 0.00 45.00 2.44
455 456 4.374843 AAAAACGGAGTGGGTACAAAAC 57.625 40.909 0.00 0.00 45.00 2.43
456 457 3.286329 AAACGGAGTGGGTACAAAACT 57.714 42.857 0.00 0.00 45.00 2.66
457 458 2.249844 ACGGAGTGGGTACAAAACTG 57.750 50.000 0.00 0.00 42.51 3.16
458 459 1.764134 ACGGAGTGGGTACAAAACTGA 59.236 47.619 0.00 0.00 42.51 3.41
459 460 2.370849 ACGGAGTGGGTACAAAACTGAT 59.629 45.455 0.00 0.00 42.51 2.90
460 461 3.579586 ACGGAGTGGGTACAAAACTGATA 59.420 43.478 0.00 0.00 42.51 2.15
461 462 4.040706 ACGGAGTGGGTACAAAACTGATAA 59.959 41.667 0.00 0.00 42.51 1.75
462 463 4.998672 CGGAGTGGGTACAAAACTGATAAA 59.001 41.667 0.00 0.00 0.00 1.40
463 464 5.470777 CGGAGTGGGTACAAAACTGATAAAA 59.529 40.000 0.00 0.00 0.00 1.52
464 465 6.016943 CGGAGTGGGTACAAAACTGATAAAAA 60.017 38.462 0.00 0.00 0.00 1.94
465 466 7.143340 GGAGTGGGTACAAAACTGATAAAAAC 58.857 38.462 0.00 0.00 0.00 2.43
466 467 7.201839 GGAGTGGGTACAAAACTGATAAAAACA 60.202 37.037 0.00 0.00 0.00 2.83
467 468 8.068892 AGTGGGTACAAAACTGATAAAAACAA 57.931 30.769 0.00 0.00 0.00 2.83
468 469 8.532819 AGTGGGTACAAAACTGATAAAAACAAA 58.467 29.630 0.00 0.00 0.00 2.83
469 470 9.320352 GTGGGTACAAAACTGATAAAAACAAAT 57.680 29.630 0.00 0.00 0.00 2.32
487 488 9.908152 AAAACAAATACTAGTACATGAAAAGGC 57.092 29.630 18.74 0.00 0.00 4.35
488 489 7.625828 ACAAATACTAGTACATGAAAAGGCC 57.374 36.000 18.74 0.00 0.00 5.19
489 490 6.315393 ACAAATACTAGTACATGAAAAGGCCG 59.685 38.462 18.74 0.00 0.00 6.13
490 491 5.864418 ATACTAGTACATGAAAAGGCCGA 57.136 39.130 4.31 0.00 0.00 5.54
491 492 4.124851 ACTAGTACATGAAAAGGCCGAG 57.875 45.455 0.00 0.00 0.00 4.63
492 493 3.767673 ACTAGTACATGAAAAGGCCGAGA 59.232 43.478 0.00 0.00 0.00 4.04
493 494 3.695830 AGTACATGAAAAGGCCGAGAA 57.304 42.857 0.00 0.00 0.00 2.87
494 495 4.015872 AGTACATGAAAAGGCCGAGAAA 57.984 40.909 0.00 0.00 0.00 2.52
495 496 4.394729 AGTACATGAAAAGGCCGAGAAAA 58.605 39.130 0.00 0.00 0.00 2.29
496 497 4.825085 AGTACATGAAAAGGCCGAGAAAAA 59.175 37.500 0.00 0.00 0.00 1.94
497 498 4.871933 ACATGAAAAGGCCGAGAAAAAT 57.128 36.364 0.00 0.00 0.00 1.82
498 499 5.975693 ACATGAAAAGGCCGAGAAAAATA 57.024 34.783 0.00 0.00 0.00 1.40
499 500 5.709966 ACATGAAAAGGCCGAGAAAAATAC 58.290 37.500 0.00 0.00 0.00 1.89
500 501 5.476945 ACATGAAAAGGCCGAGAAAAATACT 59.523 36.000 0.00 0.00 0.00 2.12
501 502 5.622770 TGAAAAGGCCGAGAAAAATACTC 57.377 39.130 0.00 0.00 0.00 2.59
502 503 4.457949 TGAAAAGGCCGAGAAAAATACTCC 59.542 41.667 0.00 0.00 0.00 3.85
503 504 2.711978 AGGCCGAGAAAAATACTCCC 57.288 50.000 0.00 0.00 0.00 4.30
504 505 2.197465 AGGCCGAGAAAAATACTCCCT 58.803 47.619 0.00 0.00 0.00 4.20
505 506 2.170817 AGGCCGAGAAAAATACTCCCTC 59.829 50.000 0.00 0.00 0.00 4.30
506 507 2.562635 GCCGAGAAAAATACTCCCTCC 58.437 52.381 0.00 0.00 0.00 4.30
507 508 2.093128 GCCGAGAAAAATACTCCCTCCA 60.093 50.000 0.00 0.00 0.00 3.86
508 509 3.433740 GCCGAGAAAAATACTCCCTCCAT 60.434 47.826 0.00 0.00 0.00 3.41
509 510 4.781934 CCGAGAAAAATACTCCCTCCATT 58.218 43.478 0.00 0.00 0.00 3.16
510 511 4.816925 CCGAGAAAAATACTCCCTCCATTC 59.183 45.833 0.00 0.00 0.00 2.67
511 512 4.816925 CGAGAAAAATACTCCCTCCATTCC 59.183 45.833 0.00 0.00 0.00 3.01
512 513 5.629133 CGAGAAAAATACTCCCTCCATTCCA 60.629 44.000 0.00 0.00 0.00 3.53
513 514 6.152638 AGAAAAATACTCCCTCCATTCCAA 57.847 37.500 0.00 0.00 0.00 3.53
514 515 6.561294 AGAAAAATACTCCCTCCATTCCAAA 58.439 36.000 0.00 0.00 0.00 3.28
515 516 7.191918 AGAAAAATACTCCCTCCATTCCAAAT 58.808 34.615 0.00 0.00 0.00 2.32
516 517 7.679881 AGAAAAATACTCCCTCCATTCCAAATT 59.320 33.333 0.00 0.00 0.00 1.82
517 518 8.909423 AAAAATACTCCCTCCATTCCAAATTA 57.091 30.769 0.00 0.00 0.00 1.40
518 519 8.909423 AAAATACTCCCTCCATTCCAAATTAA 57.091 30.769 0.00 0.00 0.00 1.40
519 520 9.506042 AAAATACTCCCTCCATTCCAAATTAAT 57.494 29.630 0.00 0.00 0.00 1.40
520 521 9.506042 AAATACTCCCTCCATTCCAAATTAATT 57.494 29.630 0.00 0.00 0.00 1.40
523 524 8.306313 ACTCCCTCCATTCCAAATTAATTAAC 57.694 34.615 0.01 0.00 0.00 2.01
524 525 7.344612 ACTCCCTCCATTCCAAATTAATTAACC 59.655 37.037 0.01 0.00 0.00 2.85
525 526 7.426667 TCCCTCCATTCCAAATTAATTAACCT 58.573 34.615 0.01 0.00 0.00 3.50
526 527 7.904022 TCCCTCCATTCCAAATTAATTAACCTT 59.096 33.333 0.01 0.00 0.00 3.50
527 528 8.204160 CCCTCCATTCCAAATTAATTAACCTTC 58.796 37.037 0.01 0.00 0.00 3.46
528 529 7.920682 CCTCCATTCCAAATTAATTAACCTTCG 59.079 37.037 0.01 0.00 0.00 3.79
529 530 8.356000 TCCATTCCAAATTAATTAACCTTCGT 57.644 30.769 0.01 0.00 0.00 3.85
530 531 8.808092 TCCATTCCAAATTAATTAACCTTCGTT 58.192 29.630 0.01 0.00 35.90 3.85
531 532 9.083080 CCATTCCAAATTAATTAACCTTCGTTC 57.917 33.333 0.01 0.00 33.17 3.95
532 533 9.083080 CATTCCAAATTAATTAACCTTCGTTCC 57.917 33.333 0.01 0.00 33.17 3.62
533 534 7.762588 TCCAAATTAATTAACCTTCGTTCCA 57.237 32.000 0.01 0.00 33.17 3.53
534 535 8.179509 TCCAAATTAATTAACCTTCGTTCCAA 57.820 30.769 0.01 0.00 33.17 3.53
535 536 8.639761 TCCAAATTAATTAACCTTCGTTCCAAA 58.360 29.630 0.01 0.00 33.17 3.28
536 537 9.430623 CCAAATTAATTAACCTTCGTTCCAAAT 57.569 29.630 0.01 0.00 33.17 2.32
545 546 9.911138 TTAACCTTCGTTCCAAATTAATTAACC 57.089 29.630 0.01 0.00 33.17 2.85
546 547 7.770366 ACCTTCGTTCCAAATTAATTAACCT 57.230 32.000 0.01 0.00 0.00 3.50
547 548 7.823665 ACCTTCGTTCCAAATTAATTAACCTC 58.176 34.615 0.01 0.00 0.00 3.85
548 549 7.094075 ACCTTCGTTCCAAATTAATTAACCTCC 60.094 37.037 0.01 0.00 0.00 4.30
549 550 7.094118 CCTTCGTTCCAAATTAATTAACCTCCA 60.094 37.037 0.01 0.00 0.00 3.86
550 551 7.148355 TCGTTCCAAATTAATTAACCTCCAC 57.852 36.000 0.01 0.00 0.00 4.02
551 552 6.151480 TCGTTCCAAATTAATTAACCTCCACC 59.849 38.462 0.01 0.00 0.00 4.61
552 553 6.152154 CGTTCCAAATTAATTAACCTCCACCT 59.848 38.462 0.01 0.00 0.00 4.00
553 554 7.544622 GTTCCAAATTAATTAACCTCCACCTC 58.455 38.462 0.01 0.00 0.00 3.85
554 555 6.192044 TCCAAATTAATTAACCTCCACCTCC 58.808 40.000 0.01 0.00 0.00 4.30
555 556 5.955355 CCAAATTAATTAACCTCCACCTCCA 59.045 40.000 0.01 0.00 0.00 3.86
556 557 6.611236 CCAAATTAATTAACCTCCACCTCCAT 59.389 38.462 0.01 0.00 0.00 3.41
557 558 7.125659 CCAAATTAATTAACCTCCACCTCCATT 59.874 37.037 0.01 0.00 0.00 3.16
558 559 8.539544 CAAATTAATTAACCTCCACCTCCATTT 58.460 33.333 0.01 0.00 0.00 2.32
559 560 7.660030 ATTAATTAACCTCCACCTCCATTTG 57.340 36.000 0.00 0.00 0.00 2.32
560 561 4.675063 ATTAACCTCCACCTCCATTTGT 57.325 40.909 0.00 0.00 0.00 2.83
561 562 2.586648 AACCTCCACCTCCATTTGTC 57.413 50.000 0.00 0.00 0.00 3.18
562 563 1.747444 ACCTCCACCTCCATTTGTCT 58.253 50.000 0.00 0.00 0.00 3.41
563 564 2.915869 ACCTCCACCTCCATTTGTCTA 58.084 47.619 0.00 0.00 0.00 2.59
564 565 2.840651 ACCTCCACCTCCATTTGTCTAG 59.159 50.000 0.00 0.00 0.00 2.43
565 566 3.107601 CCTCCACCTCCATTTGTCTAGA 58.892 50.000 0.00 0.00 0.00 2.43
566 567 3.118592 CCTCCACCTCCATTTGTCTAGAC 60.119 52.174 16.32 16.32 0.00 2.59
567 568 3.515502 CTCCACCTCCATTTGTCTAGACA 59.484 47.826 21.74 21.74 39.98 3.41
568 569 3.260884 TCCACCTCCATTTGTCTAGACAC 59.739 47.826 25.13 0.00 41.67 3.67
569 570 3.007940 CCACCTCCATTTGTCTAGACACA 59.992 47.826 25.13 19.36 41.67 3.72
570 571 4.248859 CACCTCCATTTGTCTAGACACAG 58.751 47.826 25.13 16.41 41.67 3.66
571 572 4.021104 CACCTCCATTTGTCTAGACACAGA 60.021 45.833 25.13 16.65 41.67 3.41
572 573 4.780021 ACCTCCATTTGTCTAGACACAGAT 59.220 41.667 25.13 15.70 41.67 2.90
573 574 5.958380 ACCTCCATTTGTCTAGACACAGATA 59.042 40.000 25.13 7.61 41.67 1.98
574 575 6.613271 ACCTCCATTTGTCTAGACACAGATAT 59.387 38.462 25.13 10.62 41.67 1.63
575 576 7.126421 ACCTCCATTTGTCTAGACACAGATATT 59.874 37.037 25.13 4.25 41.67 1.28
576 577 7.989741 CCTCCATTTGTCTAGACACAGATATTT 59.010 37.037 25.13 0.00 41.67 1.40
599 600 7.876936 TTATATCTACTTTCTCCGTCACAGT 57.123 36.000 0.00 0.00 0.00 3.55
600 601 4.705337 ATCTACTTTCTCCGTCACAGTC 57.295 45.455 0.00 0.00 0.00 3.51
601 602 3.752665 TCTACTTTCTCCGTCACAGTCT 58.247 45.455 0.00 0.00 0.00 3.24
602 603 4.903054 TCTACTTTCTCCGTCACAGTCTA 58.097 43.478 0.00 0.00 0.00 2.59
603 604 5.311265 TCTACTTTCTCCGTCACAGTCTAA 58.689 41.667 0.00 0.00 0.00 2.10
604 605 4.931661 ACTTTCTCCGTCACAGTCTAAA 57.068 40.909 0.00 0.00 0.00 1.85
605 606 5.272283 ACTTTCTCCGTCACAGTCTAAAA 57.728 39.130 0.00 0.00 0.00 1.52
606 607 5.290386 ACTTTCTCCGTCACAGTCTAAAAG 58.710 41.667 0.00 0.00 0.00 2.27
607 608 5.068723 ACTTTCTCCGTCACAGTCTAAAAGA 59.931 40.000 0.00 0.00 0.00 2.52
608 609 4.500603 TCTCCGTCACAGTCTAAAAGAC 57.499 45.455 0.00 0.00 45.38 3.01
645 646 9.725019 TTATATGCACTTCCACAATAGATAAGG 57.275 33.333 0.00 0.00 0.00 2.69
646 647 5.435686 TGCACTTCCACAATAGATAAGGT 57.564 39.130 0.00 0.00 0.00 3.50
647 648 5.815581 TGCACTTCCACAATAGATAAGGTT 58.184 37.500 0.00 0.00 0.00 3.50
648 649 6.245408 TGCACTTCCACAATAGATAAGGTTT 58.755 36.000 0.00 0.00 0.00 3.27
649 650 6.150976 TGCACTTCCACAATAGATAAGGTTTG 59.849 38.462 0.00 0.00 0.00 2.93
650 651 6.404734 GCACTTCCACAATAGATAAGGTTTGG 60.405 42.308 0.00 0.00 0.00 3.28
651 652 6.659242 CACTTCCACAATAGATAAGGTTTGGT 59.341 38.462 0.00 0.00 0.00 3.67
652 653 6.884836 ACTTCCACAATAGATAAGGTTTGGTC 59.115 38.462 0.00 0.00 0.00 4.02
653 654 5.751586 TCCACAATAGATAAGGTTTGGTCC 58.248 41.667 0.00 0.00 0.00 4.46
654 655 5.251932 TCCACAATAGATAAGGTTTGGTCCA 59.748 40.000 0.00 0.00 0.00 4.02
655 656 5.949354 CCACAATAGATAAGGTTTGGTCCAA 59.051 40.000 0.00 0.00 0.00 3.53
656 657 6.607198 CCACAATAGATAAGGTTTGGTCCAAT 59.393 38.462 4.80 0.00 0.00 3.16
657 658 7.416664 CCACAATAGATAAGGTTTGGTCCAATG 60.417 40.741 4.80 0.00 0.00 2.82
658 659 7.339212 CACAATAGATAAGGTTTGGTCCAATGA 59.661 37.037 4.80 0.00 0.00 2.57
659 660 7.893302 ACAATAGATAAGGTTTGGTCCAATGAA 59.107 33.333 4.80 0.00 0.00 2.57
660 661 7.881775 ATAGATAAGGTTTGGTCCAATGAAC 57.118 36.000 4.80 0.42 0.00 3.18
661 662 5.016831 AGATAAGGTTTGGTCCAATGAACC 58.983 41.667 14.03 14.03 41.40 3.62
662 663 1.616159 AGGTTTGGTCCAATGAACCG 58.384 50.000 15.38 0.00 44.78 4.44
663 664 1.133606 AGGTTTGGTCCAATGAACCGT 60.134 47.619 15.38 4.84 44.78 4.83
664 665 1.000717 GGTTTGGTCCAATGAACCGTG 60.001 52.381 4.80 0.00 39.81 4.94
665 666 1.950909 GTTTGGTCCAATGAACCGTGA 59.049 47.619 4.80 0.00 39.81 4.35
666 667 1.600023 TTGGTCCAATGAACCGTGAC 58.400 50.000 0.00 0.00 39.81 3.67
667 668 0.601576 TGGTCCAATGAACCGTGACG 60.602 55.000 0.00 0.00 39.81 4.35
668 669 0.320073 GGTCCAATGAACCGTGACGA 60.320 55.000 6.54 0.00 0.00 4.20
669 670 1.504359 GTCCAATGAACCGTGACGAA 58.496 50.000 6.54 0.00 0.00 3.85
670 671 1.459592 GTCCAATGAACCGTGACGAAG 59.540 52.381 6.54 0.00 0.00 3.79
671 672 1.341852 TCCAATGAACCGTGACGAAGA 59.658 47.619 6.54 0.00 0.00 2.87
672 673 2.139917 CCAATGAACCGTGACGAAGAA 58.860 47.619 6.54 0.00 0.00 2.52
673 674 2.546368 CCAATGAACCGTGACGAAGAAA 59.454 45.455 6.54 0.00 0.00 2.52
674 675 3.363970 CCAATGAACCGTGACGAAGAAAG 60.364 47.826 6.54 0.00 0.00 2.62
675 676 2.589798 TGAACCGTGACGAAGAAAGT 57.410 45.000 6.54 0.00 0.00 2.66
676 677 3.713858 TGAACCGTGACGAAGAAAGTA 57.286 42.857 6.54 0.00 0.00 2.24
677 678 3.635331 TGAACCGTGACGAAGAAAGTAG 58.365 45.455 6.54 0.00 0.00 2.57
678 679 3.067180 TGAACCGTGACGAAGAAAGTAGT 59.933 43.478 6.54 0.00 0.00 2.73
679 680 3.279853 ACCGTGACGAAGAAAGTAGTC 57.720 47.619 6.54 0.00 0.00 2.59
680 681 2.620115 ACCGTGACGAAGAAAGTAGTCA 59.380 45.455 6.54 0.00 40.77 3.41
681 682 3.067180 ACCGTGACGAAGAAAGTAGTCAA 59.933 43.478 6.54 0.00 43.96 3.18
687 688 7.516155 CGTGACGAAGAAAGTAGTCAAAAATGA 60.516 37.037 0.00 0.00 43.96 2.57
699 700 9.788960 AGTAGTCAAAAATGAAAGTCAAGAAAC 57.211 29.630 0.00 0.00 0.00 2.78
715 716 2.879026 AGAAACTTGGAACGAAGGAAGC 59.121 45.455 0.00 0.00 0.00 3.86
722 723 3.420893 TGGAACGAAGGAAGCATGAATT 58.579 40.909 0.00 0.00 0.00 2.17
727 728 4.019174 ACGAAGGAAGCATGAATTGGAAT 58.981 39.130 0.00 0.00 0.00 3.01
748 749 4.109675 GCCCTGCCCCTCGCTTTA 62.110 66.667 0.00 0.00 38.78 1.85
749 750 2.919043 CCCTGCCCCTCGCTTTAT 59.081 61.111 0.00 0.00 38.78 1.40
750 751 2.052047 GCCCTGCCCCTCGCTTTATA 62.052 60.000 0.00 0.00 38.78 0.98
751 752 0.035458 CCCTGCCCCTCGCTTTATAG 59.965 60.000 0.00 0.00 38.78 1.31
811 812 2.481449 GCGATGTGGGACTAATCGAACT 60.481 50.000 8.35 0.00 43.39 3.01
1300 1303 2.640332 TGGCTTGGTACTGTTGGATGTA 59.360 45.455 0.00 0.00 0.00 2.29
1371 1379 2.666026 TGAATACGATCTGATCAGCGC 58.334 47.619 18.36 10.77 0.00 5.92
1388 1396 1.293179 GCTGATGTTTGGTTGGGCC 59.707 57.895 0.00 0.00 37.90 5.80
1469 1477 1.914634 CACAGATCTAGTGTGCGTCC 58.085 55.000 13.84 0.00 39.00 4.79
1496 1507 3.222173 TGCCTGTTGGTAGAAATGTGT 57.778 42.857 0.00 0.00 35.27 3.72
1502 1513 5.277974 CCTGTTGGTAGAAATGTGTTGTGAG 60.278 44.000 0.00 0.00 0.00 3.51
1509 1520 1.444933 AATGTGTTGTGAGGAGGGGA 58.555 50.000 0.00 0.00 0.00 4.81
1510 1521 1.444933 ATGTGTTGTGAGGAGGGGAA 58.555 50.000 0.00 0.00 0.00 3.97
1511 1522 1.217916 TGTGTTGTGAGGAGGGGAAA 58.782 50.000 0.00 0.00 0.00 3.13
1635 1651 9.699410 TGAGATGTATTGGGAATTTTAACTCAT 57.301 29.630 0.00 0.00 0.00 2.90
1722 1743 9.638176 ACTTATTTGCTGGAAAATAGAGATGAT 57.362 29.630 11.38 0.00 34.39 2.45
1796 1817 0.756442 TTGCATAGGCTGGATTGGGC 60.756 55.000 0.00 0.00 41.91 5.36
1809 1830 0.466189 ATTGGGCGGACATGATGGTC 60.466 55.000 0.00 0.00 37.06 4.02
1825 1846 4.098044 TGATGGTCCTTATCGTCTCTGTTC 59.902 45.833 0.00 0.00 0.00 3.18
1832 1853 5.359860 TCCTTATCGTCTCTGTTCTATGCAA 59.640 40.000 0.00 0.00 0.00 4.08
1914 1944 7.064016 GCTCTGTTTGAAGATTAACTGTAGGAG 59.936 40.741 0.00 0.00 0.00 3.69
1947 1977 6.763135 TGAACTTCTATGCAGTCATGGTTATC 59.237 38.462 0.00 0.00 33.47 1.75
1969 1999 6.111768 TCGATTAATCTCTGCAAGCTTTTC 57.888 37.500 13.45 0.00 0.00 2.29
1976 2006 3.125829 TCTCTGCAAGCTTTTCGCAATAG 59.874 43.478 10.73 10.68 42.61 1.73
2070 2100 2.169663 GCATTCGTGAACTCATGCTG 57.830 50.000 6.50 0.00 39.20 4.41
2090 2120 4.631813 GCTGACGATAAAGAAACCTCATGT 59.368 41.667 0.00 0.00 0.00 3.21
2124 2154 4.649674 TGTGCAAGTCTACTAATAGAGGGG 59.350 45.833 0.00 0.00 38.14 4.79
2167 2197 4.573201 CACCCGTAGTTTTCACTTTTCAGA 59.427 41.667 0.00 0.00 34.06 3.27
2202 2232 5.295292 CAGTACCTCATAGTTCTGCAAATGG 59.705 44.000 0.00 0.00 29.97 3.16
2218 2248 4.933400 GCAAATGGCTCAAGATTTGTCATT 59.067 37.500 0.00 0.00 40.31 2.57
2219 2249 6.101332 GCAAATGGCTCAAGATTTGTCATTA 58.899 36.000 0.00 0.00 40.31 1.90
2221 2251 7.318141 CAAATGGCTCAAGATTTGTCATTACT 58.682 34.615 0.00 0.00 35.64 2.24
2222 2252 6.690194 ATGGCTCAAGATTTGTCATTACTC 57.310 37.500 0.00 0.00 0.00 2.59
2223 2253 5.809001 TGGCTCAAGATTTGTCATTACTCT 58.191 37.500 0.00 0.00 0.00 3.24
2224 2254 6.946340 TGGCTCAAGATTTGTCATTACTCTA 58.054 36.000 0.00 0.00 0.00 2.43
2227 2257 8.897752 GGCTCAAGATTTGTCATTACTCTATTT 58.102 33.333 0.00 0.00 0.00 1.40
2228 2258 9.713740 GCTCAAGATTTGTCATTACTCTATTTG 57.286 33.333 0.00 0.00 0.00 2.32
2268 2299 3.181506 GCAAAGCAGAGGGAGTTTATTCG 60.182 47.826 0.00 0.00 0.00 3.34
2271 2302 1.134371 GCAGAGGGAGTTTATTCGGCT 60.134 52.381 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.277756 CGGTAGGTACGAGCACGC 60.278 66.667 2.62 0.00 43.96 5.34
1 2 1.061570 GACGGTAGGTACGAGCACG 59.938 63.158 0.76 0.76 45.75 5.34
4 5 2.352503 TTTTGACGGTAGGTACGAGC 57.647 50.000 0.00 0.00 34.93 5.03
5 6 3.905784 AGTTTTTGACGGTAGGTACGAG 58.094 45.455 0.00 0.00 34.93 4.18
6 7 4.320608 AAGTTTTTGACGGTAGGTACGA 57.679 40.909 0.00 0.00 34.93 3.43
7 8 4.507388 TCAAAGTTTTTGACGGTAGGTACG 59.493 41.667 0.36 0.00 37.36 3.67
8 9 5.989551 TCAAAGTTTTTGACGGTAGGTAC 57.010 39.130 0.36 0.00 0.00 3.34
9 10 5.470777 CCATCAAAGTTTTTGACGGTAGGTA 59.529 40.000 8.14 0.00 28.07 3.08
10 11 4.277423 CCATCAAAGTTTTTGACGGTAGGT 59.723 41.667 8.14 0.00 28.07 3.08
11 12 4.277423 ACCATCAAAGTTTTTGACGGTAGG 59.723 41.667 17.62 11.53 42.41 3.18
12 13 5.432885 ACCATCAAAGTTTTTGACGGTAG 57.567 39.130 17.62 4.36 42.41 3.18
13 14 5.470777 CCTACCATCAAAGTTTTTGACGGTA 59.529 40.000 21.26 21.26 42.41 4.02
14 15 4.277423 CCTACCATCAAAGTTTTTGACGGT 59.723 41.667 21.29 21.29 45.55 4.83
15 16 4.320935 CCCTACCATCAAAGTTTTTGACGG 60.321 45.833 13.34 13.34 37.74 4.79
16 17 4.277423 ACCCTACCATCAAAGTTTTTGACG 59.723 41.667 6.40 0.00 0.00 4.35
17 18 5.784578 ACCCTACCATCAAAGTTTTTGAC 57.215 39.130 6.40 0.00 0.00 3.18
18 19 5.659079 ACAACCCTACCATCAAAGTTTTTGA 59.341 36.000 6.69 6.69 0.00 2.69
19 20 5.752955 CACAACCCTACCATCAAAGTTTTTG 59.247 40.000 0.00 0.00 0.00 2.44
20 21 5.163353 CCACAACCCTACCATCAAAGTTTTT 60.163 40.000 0.00 0.00 0.00 1.94
21 22 4.343814 CCACAACCCTACCATCAAAGTTTT 59.656 41.667 0.00 0.00 0.00 2.43
22 23 3.895041 CCACAACCCTACCATCAAAGTTT 59.105 43.478 0.00 0.00 0.00 2.66
23 24 3.496331 CCACAACCCTACCATCAAAGTT 58.504 45.455 0.00 0.00 0.00 2.66
24 25 2.225017 CCCACAACCCTACCATCAAAGT 60.225 50.000 0.00 0.00 0.00 2.66
25 26 2.446435 CCCACAACCCTACCATCAAAG 58.554 52.381 0.00 0.00 0.00 2.77
26 27 1.549037 GCCCACAACCCTACCATCAAA 60.549 52.381 0.00 0.00 0.00 2.69
27 28 0.039035 GCCCACAACCCTACCATCAA 59.961 55.000 0.00 0.00 0.00 2.57
28 29 1.688811 GCCCACAACCCTACCATCA 59.311 57.895 0.00 0.00 0.00 3.07
29 30 1.451387 CGCCCACAACCCTACCATC 60.451 63.158 0.00 0.00 0.00 3.51
30 31 2.674754 CGCCCACAACCCTACCAT 59.325 61.111 0.00 0.00 0.00 3.55
31 32 3.642503 CCGCCCACAACCCTACCA 61.643 66.667 0.00 0.00 0.00 3.25
32 33 2.248086 CTACCGCCCACAACCCTACC 62.248 65.000 0.00 0.00 0.00 3.18
33 34 1.219935 CTACCGCCCACAACCCTAC 59.780 63.158 0.00 0.00 0.00 3.18
34 35 2.662070 GCTACCGCCCACAACCCTA 61.662 63.158 0.00 0.00 0.00 3.53
35 36 4.029809 GCTACCGCCCACAACCCT 62.030 66.667 0.00 0.00 0.00 4.34
36 37 3.853698 TTGCTACCGCCCACAACCC 62.854 63.158 0.00 0.00 34.43 4.11
37 38 1.457009 TTTTGCTACCGCCCACAACC 61.457 55.000 0.00 0.00 34.43 3.77
38 39 0.386113 TTTTTGCTACCGCCCACAAC 59.614 50.000 0.00 0.00 34.43 3.32
39 40 0.671251 CTTTTTGCTACCGCCCACAA 59.329 50.000 0.00 0.00 34.43 3.33
40 41 0.179015 TCTTTTTGCTACCGCCCACA 60.179 50.000 0.00 0.00 34.43 4.17
41 42 1.173913 ATCTTTTTGCTACCGCCCAC 58.826 50.000 0.00 0.00 34.43 4.61
42 43 1.917872 AATCTTTTTGCTACCGCCCA 58.082 45.000 0.00 0.00 34.43 5.36
43 44 3.275999 TCTAATCTTTTTGCTACCGCCC 58.724 45.455 0.00 0.00 34.43 6.13
44 45 4.816925 AGATCTAATCTTTTTGCTACCGCC 59.183 41.667 0.00 0.00 35.76 6.13
45 46 5.332656 CGAGATCTAATCTTTTTGCTACCGC 60.333 44.000 0.00 0.00 40.38 5.68
46 47 5.977725 TCGAGATCTAATCTTTTTGCTACCG 59.022 40.000 0.00 0.00 40.38 4.02
47 48 7.954788 ATCGAGATCTAATCTTTTTGCTACC 57.045 36.000 0.00 0.00 40.38 3.18
74 75 7.889873 TTCAGATTTGACCCTGAGTTAAAAA 57.110 32.000 0.00 0.00 40.13 1.94
75 76 7.889873 TTTCAGATTTGACCCTGAGTTAAAA 57.110 32.000 0.00 0.00 40.13 1.52
76 77 9.231297 CTATTTCAGATTTGACCCTGAGTTAAA 57.769 33.333 0.00 0.00 40.13 1.52
77 78 7.829211 CCTATTTCAGATTTGACCCTGAGTTAA 59.171 37.037 0.00 0.00 40.13 2.01
78 79 7.037586 ACCTATTTCAGATTTGACCCTGAGTTA 60.038 37.037 0.00 0.00 40.13 2.24
79 80 6.183347 CCTATTTCAGATTTGACCCTGAGTT 58.817 40.000 0.00 0.00 40.13 3.01
80 81 5.251700 ACCTATTTCAGATTTGACCCTGAGT 59.748 40.000 0.00 0.00 40.13 3.41
81 82 5.749462 ACCTATTTCAGATTTGACCCTGAG 58.251 41.667 0.00 0.00 40.13 3.35
82 83 5.779241 ACCTATTTCAGATTTGACCCTGA 57.221 39.130 0.00 0.00 37.61 3.86
83 84 6.403636 CGAAACCTATTTCAGATTTGACCCTG 60.404 42.308 1.13 0.00 43.90 4.45
84 85 5.648092 CGAAACCTATTTCAGATTTGACCCT 59.352 40.000 1.13 0.00 43.90 4.34
85 86 5.163652 CCGAAACCTATTTCAGATTTGACCC 60.164 44.000 1.13 0.00 43.90 4.46
86 87 5.646360 TCCGAAACCTATTTCAGATTTGACC 59.354 40.000 1.13 0.00 43.90 4.02
87 88 6.737254 TCCGAAACCTATTTCAGATTTGAC 57.263 37.500 1.13 0.00 43.90 3.18
88 89 7.753309 TTTCCGAAACCTATTTCAGATTTGA 57.247 32.000 1.13 0.00 43.90 2.69
89 90 7.542130 CCTTTTCCGAAACCTATTTCAGATTTG 59.458 37.037 0.00 0.00 43.90 2.32
90 91 7.450323 TCCTTTTCCGAAACCTATTTCAGATTT 59.550 33.333 0.00 0.00 43.90 2.17
91 92 6.946009 TCCTTTTCCGAAACCTATTTCAGATT 59.054 34.615 0.00 0.00 43.90 2.40
92 93 6.481643 TCCTTTTCCGAAACCTATTTCAGAT 58.518 36.000 0.00 0.00 43.90 2.90
93 94 5.871834 TCCTTTTCCGAAACCTATTTCAGA 58.128 37.500 0.00 0.00 43.90 3.27
94 95 6.374333 TGATCCTTTTCCGAAACCTATTTCAG 59.626 38.462 0.00 0.00 43.90 3.02
95 96 6.242396 TGATCCTTTTCCGAAACCTATTTCA 58.758 36.000 0.00 0.00 43.90 2.69
96 97 6.753107 TGATCCTTTTCCGAAACCTATTTC 57.247 37.500 0.00 0.00 40.83 2.17
97 98 7.533289 TTTGATCCTTTTCCGAAACCTATTT 57.467 32.000 0.00 0.00 0.00 1.40
98 99 7.014808 TGTTTTGATCCTTTTCCGAAACCTATT 59.985 33.333 0.00 0.00 0.00 1.73
99 100 6.492087 TGTTTTGATCCTTTTCCGAAACCTAT 59.508 34.615 0.00 0.00 0.00 2.57
100 101 5.828859 TGTTTTGATCCTTTTCCGAAACCTA 59.171 36.000 0.00 0.00 0.00 3.08
101 102 4.647399 TGTTTTGATCCTTTTCCGAAACCT 59.353 37.500 0.00 0.00 0.00 3.50
102 103 4.743151 GTGTTTTGATCCTTTTCCGAAACC 59.257 41.667 0.00 0.00 0.00 3.27
103 104 4.439776 CGTGTTTTGATCCTTTTCCGAAAC 59.560 41.667 0.00 0.00 0.00 2.78
104 105 4.335874 TCGTGTTTTGATCCTTTTCCGAAA 59.664 37.500 0.00 0.00 0.00 3.46
105 106 3.878103 TCGTGTTTTGATCCTTTTCCGAA 59.122 39.130 0.00 0.00 0.00 4.30
106 107 3.468770 TCGTGTTTTGATCCTTTTCCGA 58.531 40.909 0.00 0.00 0.00 4.55
107 108 3.889196 TCGTGTTTTGATCCTTTTCCG 57.111 42.857 0.00 0.00 0.00 4.30
108 109 7.477144 AAATTTCGTGTTTTGATCCTTTTCC 57.523 32.000 0.00 0.00 0.00 3.13
109 110 7.373180 GCAAAATTTCGTGTTTTGATCCTTTTC 59.627 33.333 19.19 3.62 45.02 2.29
110 111 7.186128 GCAAAATTTCGTGTTTTGATCCTTTT 58.814 30.769 19.19 0.00 45.02 2.27
111 112 6.238347 GGCAAAATTTCGTGTTTTGATCCTTT 60.238 34.615 19.19 0.00 45.02 3.11
112 113 5.236263 GGCAAAATTTCGTGTTTTGATCCTT 59.764 36.000 19.19 0.00 45.02 3.36
113 114 4.749598 GGCAAAATTTCGTGTTTTGATCCT 59.250 37.500 19.19 0.00 45.02 3.24
114 115 4.375908 CGGCAAAATTTCGTGTTTTGATCC 60.376 41.667 19.19 13.28 45.02 3.36
115 116 4.687047 CGGCAAAATTTCGTGTTTTGATC 58.313 39.130 19.19 12.33 45.02 2.92
116 117 3.059935 GCGGCAAAATTTCGTGTTTTGAT 60.060 39.130 19.19 0.00 45.02 2.57
117 118 2.282820 GCGGCAAAATTTCGTGTTTTGA 59.717 40.909 19.19 0.00 45.02 2.69
118 119 2.598673 GGCGGCAAAATTTCGTGTTTTG 60.599 45.455 3.07 14.02 45.01 2.44
119 120 1.595328 GGCGGCAAAATTTCGTGTTTT 59.405 42.857 3.07 0.00 0.00 2.43
120 121 1.213491 GGCGGCAAAATTTCGTGTTT 58.787 45.000 3.07 0.00 0.00 2.83
121 122 0.937231 CGGCGGCAAAATTTCGTGTT 60.937 50.000 10.53 0.00 0.00 3.32
122 123 1.371145 CGGCGGCAAAATTTCGTGT 60.371 52.632 10.53 0.00 0.00 4.49
123 124 2.715849 GCGGCGGCAAAATTTCGTG 61.716 57.895 9.78 0.00 39.62 4.35
124 125 2.430075 GCGGCGGCAAAATTTCGT 60.430 55.556 9.78 0.00 39.62 3.85
125 126 2.126502 AGCGGCGGCAAAATTTCG 60.127 55.556 19.21 0.00 43.41 3.46
126 127 2.152078 CGAGCGGCGGCAAAATTTC 61.152 57.895 19.21 5.01 43.41 2.17
127 128 2.126502 CGAGCGGCGGCAAAATTT 60.127 55.556 19.21 0.00 43.41 1.82
139 140 3.095898 GATTTGGGCGAACCGAGCG 62.096 63.158 0.00 0.00 44.64 5.03
140 141 2.038269 TGATTTGGGCGAACCGAGC 61.038 57.895 0.00 0.00 44.64 5.03
141 142 0.953471 TGTGATTTGGGCGAACCGAG 60.953 55.000 0.00 0.00 44.64 4.63
142 143 0.322098 ATGTGATTTGGGCGAACCGA 60.322 50.000 0.00 0.00 44.64 4.69
143 144 0.179166 CATGTGATTTGGGCGAACCG 60.179 55.000 0.00 0.00 44.64 4.44
144 145 0.458370 GCATGTGATTTGGGCGAACC 60.458 55.000 0.00 0.00 40.81 3.62
145 146 0.243365 TGCATGTGATTTGGGCGAAC 59.757 50.000 0.00 0.00 0.00 3.95
146 147 0.243365 GTGCATGTGATTTGGGCGAA 59.757 50.000 0.00 0.00 0.00 4.70
147 148 1.882311 GTGCATGTGATTTGGGCGA 59.118 52.632 0.00 0.00 0.00 5.54
148 149 1.514657 CGTGCATGTGATTTGGGCG 60.515 57.895 0.00 0.00 0.00 6.13
149 150 0.457035 ATCGTGCATGTGATTTGGGC 59.543 50.000 5.68 0.00 0.00 5.36
150 151 1.744522 TCATCGTGCATGTGATTTGGG 59.255 47.619 5.68 0.00 33.66 4.12
151 152 3.119743 ACTTCATCGTGCATGTGATTTGG 60.120 43.478 5.68 3.78 33.66 3.28
152 153 4.087510 ACTTCATCGTGCATGTGATTTG 57.912 40.909 5.68 5.76 33.66 2.32
153 154 6.441093 AATACTTCATCGTGCATGTGATTT 57.559 33.333 5.68 2.68 33.66 2.17
154 155 6.260377 CAAATACTTCATCGTGCATGTGATT 58.740 36.000 5.68 2.99 33.66 2.57
155 156 5.220912 CCAAATACTTCATCGTGCATGTGAT 60.221 40.000 5.68 0.00 33.66 3.06
156 157 4.094739 CCAAATACTTCATCGTGCATGTGA 59.905 41.667 5.68 6.47 33.66 3.58
157 158 4.345288 CCAAATACTTCATCGTGCATGTG 58.655 43.478 5.68 4.12 33.66 3.21
158 159 3.378112 CCCAAATACTTCATCGTGCATGT 59.622 43.478 5.68 0.00 33.66 3.21
159 160 3.627123 TCCCAAATACTTCATCGTGCATG 59.373 43.478 0.00 0.00 0.00 4.06
160 161 3.884895 TCCCAAATACTTCATCGTGCAT 58.115 40.909 0.00 0.00 0.00 3.96
161 162 3.342377 TCCCAAATACTTCATCGTGCA 57.658 42.857 0.00 0.00 0.00 4.57
162 163 6.560253 ATTATCCCAAATACTTCATCGTGC 57.440 37.500 0.00 0.00 0.00 5.34
182 183 9.292195 GCACCCTAACCAAAGCTAATATAATTA 57.708 33.333 0.00 0.00 0.00 1.40
183 184 7.040686 CGCACCCTAACCAAAGCTAATATAATT 60.041 37.037 0.00 0.00 0.00 1.40
184 185 6.430000 CGCACCCTAACCAAAGCTAATATAAT 59.570 38.462 0.00 0.00 0.00 1.28
185 186 5.761234 CGCACCCTAACCAAAGCTAATATAA 59.239 40.000 0.00 0.00 0.00 0.98
186 187 5.302360 CGCACCCTAACCAAAGCTAATATA 58.698 41.667 0.00 0.00 0.00 0.86
187 188 4.134563 CGCACCCTAACCAAAGCTAATAT 58.865 43.478 0.00 0.00 0.00 1.28
188 189 3.537580 CGCACCCTAACCAAAGCTAATA 58.462 45.455 0.00 0.00 0.00 0.98
189 190 2.365582 CGCACCCTAACCAAAGCTAAT 58.634 47.619 0.00 0.00 0.00 1.73
190 191 1.816074 CGCACCCTAACCAAAGCTAA 58.184 50.000 0.00 0.00 0.00 3.09
191 192 0.675522 GCGCACCCTAACCAAAGCTA 60.676 55.000 0.30 0.00 0.00 3.32
192 193 1.971695 GCGCACCCTAACCAAAGCT 60.972 57.895 0.30 0.00 0.00 3.74
193 194 2.566529 GCGCACCCTAACCAAAGC 59.433 61.111 0.30 0.00 0.00 3.51
194 195 1.602323 TGGCGCACCCTAACCAAAG 60.602 57.895 10.83 0.00 33.59 2.77
195 196 1.899534 GTGGCGCACCCTAACCAAA 60.900 57.895 10.83 0.00 33.03 3.28
196 197 2.281900 GTGGCGCACCCTAACCAA 60.282 61.111 10.83 0.00 33.03 3.67
197 198 3.246112 AGTGGCGCACCCTAACCA 61.246 61.111 10.83 0.00 34.49 3.67
198 199 2.746277 CAGTGGCGCACCCTAACC 60.746 66.667 10.83 0.00 34.49 2.85
199 200 2.746277 CCAGTGGCGCACCCTAAC 60.746 66.667 10.83 0.00 34.49 2.34
200 201 2.925706 TCCAGTGGCGCACCCTAA 60.926 61.111 10.83 0.00 34.49 2.69
201 202 3.702048 GTCCAGTGGCGCACCCTA 61.702 66.667 10.83 0.00 34.49 3.53
203 204 2.813226 TATTGTCCAGTGGCGCACCC 62.813 60.000 10.83 0.00 34.49 4.61
204 205 1.369091 CTATTGTCCAGTGGCGCACC 61.369 60.000 10.83 0.00 34.49 5.01
205 206 0.673644 ACTATTGTCCAGTGGCGCAC 60.674 55.000 10.83 5.73 34.10 5.34
206 207 0.673333 CACTATTGTCCAGTGGCGCA 60.673 55.000 10.83 2.99 39.80 6.09
207 208 1.982073 GCACTATTGTCCAGTGGCGC 61.982 60.000 3.51 0.00 42.99 6.53
208 209 0.673333 TGCACTATTGTCCAGTGGCG 60.673 55.000 3.51 0.00 42.99 5.69
209 210 1.200020 GTTGCACTATTGTCCAGTGGC 59.800 52.381 3.51 0.00 42.99 5.01
210 211 2.503331 TGTTGCACTATTGTCCAGTGG 58.497 47.619 1.40 1.40 42.99 4.00
211 212 3.127548 GGATGTTGCACTATTGTCCAGTG 59.872 47.826 0.00 0.00 45.08 3.66
212 213 3.244875 TGGATGTTGCACTATTGTCCAGT 60.245 43.478 0.00 0.00 31.21 4.00
213 214 3.346315 TGGATGTTGCACTATTGTCCAG 58.654 45.455 0.00 0.00 31.21 3.86
214 215 3.431673 TGGATGTTGCACTATTGTCCA 57.568 42.857 0.00 0.00 32.26 4.02
215 216 4.458989 TCTTTGGATGTTGCACTATTGTCC 59.541 41.667 0.00 0.00 0.00 4.02
216 217 5.627499 TCTTTGGATGTTGCACTATTGTC 57.373 39.130 0.00 0.00 0.00 3.18
217 218 5.301551 TGTTCTTTGGATGTTGCACTATTGT 59.698 36.000 0.00 0.00 0.00 2.71
218 219 5.630680 GTGTTCTTTGGATGTTGCACTATTG 59.369 40.000 0.00 0.00 0.00 1.90
219 220 5.562696 CGTGTTCTTTGGATGTTGCACTATT 60.563 40.000 0.00 0.00 0.00 1.73
220 221 4.083324 CGTGTTCTTTGGATGTTGCACTAT 60.083 41.667 0.00 0.00 0.00 2.12
221 222 3.249799 CGTGTTCTTTGGATGTTGCACTA 59.750 43.478 0.00 0.00 0.00 2.74
222 223 2.033299 CGTGTTCTTTGGATGTTGCACT 59.967 45.455 0.00 0.00 0.00 4.40
223 224 2.223479 ACGTGTTCTTTGGATGTTGCAC 60.223 45.455 0.00 0.00 0.00 4.57
224 225 2.020720 ACGTGTTCTTTGGATGTTGCA 58.979 42.857 0.00 0.00 0.00 4.08
225 226 2.032799 TCACGTGTTCTTTGGATGTTGC 59.967 45.455 16.51 0.00 0.00 4.17
226 227 3.303990 CCTCACGTGTTCTTTGGATGTTG 60.304 47.826 16.51 0.00 0.00 3.33
227 228 2.878406 CCTCACGTGTTCTTTGGATGTT 59.122 45.455 16.51 0.00 0.00 2.71
228 229 2.494059 CCTCACGTGTTCTTTGGATGT 58.506 47.619 16.51 0.00 0.00 3.06
229 230 1.806542 CCCTCACGTGTTCTTTGGATG 59.193 52.381 16.51 0.00 0.00 3.51
230 231 1.697432 TCCCTCACGTGTTCTTTGGAT 59.303 47.619 16.51 0.00 0.00 3.41
231 232 1.124780 TCCCTCACGTGTTCTTTGGA 58.875 50.000 16.51 10.33 0.00 3.53
232 233 1.806542 CATCCCTCACGTGTTCTTTGG 59.193 52.381 16.51 8.22 0.00 3.28
233 234 1.806542 CCATCCCTCACGTGTTCTTTG 59.193 52.381 16.51 9.18 0.00 2.77
234 235 1.697432 TCCATCCCTCACGTGTTCTTT 59.303 47.619 16.51 0.00 0.00 2.52
235 236 1.002087 GTCCATCCCTCACGTGTTCTT 59.998 52.381 16.51 0.00 0.00 2.52
236 237 0.608640 GTCCATCCCTCACGTGTTCT 59.391 55.000 16.51 0.00 0.00 3.01
237 238 0.391263 GGTCCATCCCTCACGTGTTC 60.391 60.000 16.51 0.00 0.00 3.18
238 239 1.677552 GGTCCATCCCTCACGTGTT 59.322 57.895 16.51 0.00 0.00 3.32
239 240 3.388841 GGTCCATCCCTCACGTGT 58.611 61.111 16.51 0.00 0.00 4.49
252 253 1.078115 TGTTTTTAGGGAGGGGGTCC 58.922 55.000 0.00 0.00 46.10 4.46
253 254 2.984435 TTGTTTTTAGGGAGGGGGTC 57.016 50.000 0.00 0.00 0.00 4.46
254 255 3.935240 ATTTGTTTTTAGGGAGGGGGT 57.065 42.857 0.00 0.00 0.00 4.95
255 256 6.689663 TTAAATTTGTTTTTAGGGAGGGGG 57.310 37.500 0.00 0.00 0.00 5.40
257 258 9.744468 CGATATTAAATTTGTTTTTAGGGAGGG 57.256 33.333 0.00 0.00 0.00 4.30
268 269 9.900710 TGTGCTTACAACGATATTAAATTTGTT 57.099 25.926 0.00 0.00 32.73 2.83
272 273 9.716507 GTCATGTGCTTACAACGATATTAAATT 57.283 29.630 0.00 0.00 0.00 1.82
273 274 9.109393 AGTCATGTGCTTACAACGATATTAAAT 57.891 29.630 0.00 0.00 0.00 1.40
274 275 8.487313 AGTCATGTGCTTACAACGATATTAAA 57.513 30.769 0.00 0.00 0.00 1.52
275 276 7.762159 TGAGTCATGTGCTTACAACGATATTAA 59.238 33.333 0.00 0.00 0.00 1.40
276 277 7.262048 TGAGTCATGTGCTTACAACGATATTA 58.738 34.615 0.00 0.00 0.00 0.98
277 278 6.106003 TGAGTCATGTGCTTACAACGATATT 58.894 36.000 0.00 0.00 0.00 1.28
278 279 5.660460 TGAGTCATGTGCTTACAACGATAT 58.340 37.500 0.00 0.00 0.00 1.63
279 280 5.066968 TGAGTCATGTGCTTACAACGATA 57.933 39.130 0.00 0.00 0.00 2.92
280 281 3.925379 TGAGTCATGTGCTTACAACGAT 58.075 40.909 0.00 0.00 0.00 3.73
281 282 3.378911 TGAGTCATGTGCTTACAACGA 57.621 42.857 0.00 0.00 0.00 3.85
282 283 5.973651 ATATGAGTCATGTGCTTACAACG 57.026 39.130 16.15 0.00 0.00 4.10
283 284 8.593492 TGATATATGAGTCATGTGCTTACAAC 57.407 34.615 16.15 0.00 0.00 3.32
295 296 8.624776 CGCAGGAAGTATATGATATATGAGTCA 58.375 37.037 0.00 0.00 0.00 3.41
296 297 7.593273 GCGCAGGAAGTATATGATATATGAGTC 59.407 40.741 0.30 0.00 0.00 3.36
297 298 7.286546 AGCGCAGGAAGTATATGATATATGAGT 59.713 37.037 11.47 0.00 0.00 3.41
298 299 7.656412 AGCGCAGGAAGTATATGATATATGAG 58.344 38.462 11.47 0.00 0.00 2.90
299 300 7.588497 AGCGCAGGAAGTATATGATATATGA 57.412 36.000 11.47 0.00 0.00 2.15
300 301 8.654230 AAAGCGCAGGAAGTATATGATATATG 57.346 34.615 11.47 0.00 0.00 1.78
302 303 9.803315 CTAAAAGCGCAGGAAGTATATGATATA 57.197 33.333 11.47 0.00 0.00 0.86
303 304 7.278868 GCTAAAAGCGCAGGAAGTATATGATAT 59.721 37.037 11.47 0.00 0.00 1.63
304 305 6.590292 GCTAAAAGCGCAGGAAGTATATGATA 59.410 38.462 11.47 0.00 0.00 2.15
305 306 5.409826 GCTAAAAGCGCAGGAAGTATATGAT 59.590 40.000 11.47 0.00 0.00 2.45
306 307 4.750098 GCTAAAAGCGCAGGAAGTATATGA 59.250 41.667 11.47 0.00 0.00 2.15
307 308 5.023551 GCTAAAAGCGCAGGAAGTATATG 57.976 43.478 11.47 0.00 0.00 1.78
321 322 4.540824 CTTGACTTTGACCAGCTAAAAGC 58.459 43.478 9.19 0.00 42.84 3.51
322 323 4.276926 AGCTTGACTTTGACCAGCTAAAAG 59.723 41.667 8.16 8.16 37.04 2.27
323 324 4.207165 AGCTTGACTTTGACCAGCTAAAA 58.793 39.130 0.00 0.00 0.00 1.52
324 325 3.820557 AGCTTGACTTTGACCAGCTAAA 58.179 40.909 0.00 0.00 0.00 1.85
325 326 3.492102 AGCTTGACTTTGACCAGCTAA 57.508 42.857 0.00 0.00 0.00 3.09
326 327 3.492102 AAGCTTGACTTTGACCAGCTA 57.508 42.857 0.00 0.00 33.71 3.32
327 328 2.355010 AAGCTTGACTTTGACCAGCT 57.645 45.000 0.00 0.00 33.71 4.24
383 384 9.237187 TGGTATTGAATTGTGTATTGTGTATGT 57.763 29.630 0.00 0.00 0.00 2.29
415 416 8.920665 CCGTTTTTAAAGCACATTCAATAATGA 58.079 29.630 5.18 0.00 44.50 2.57
416 417 8.920665 TCCGTTTTTAAAGCACATTCAATAATG 58.079 29.630 0.00 0.00 46.66 1.90
417 418 9.139174 CTCCGTTTTTAAAGCACATTCAATAAT 57.861 29.630 0.00 0.00 0.00 1.28
418 419 8.138712 ACTCCGTTTTTAAAGCACATTCAATAA 58.861 29.630 0.00 0.00 0.00 1.40
419 420 7.593273 CACTCCGTTTTTAAAGCACATTCAATA 59.407 33.333 0.00 0.00 0.00 1.90
420 421 6.420604 CACTCCGTTTTTAAAGCACATTCAAT 59.579 34.615 0.00 0.00 0.00 2.57
421 422 5.746245 CACTCCGTTTTTAAAGCACATTCAA 59.254 36.000 0.00 0.00 0.00 2.69
422 423 5.277825 CACTCCGTTTTTAAAGCACATTCA 58.722 37.500 0.00 0.00 0.00 2.57
423 424 4.679654 CCACTCCGTTTTTAAAGCACATTC 59.320 41.667 0.00 0.00 0.00 2.67
424 425 4.500716 CCCACTCCGTTTTTAAAGCACATT 60.501 41.667 0.00 0.00 0.00 2.71
425 426 3.005367 CCCACTCCGTTTTTAAAGCACAT 59.995 43.478 0.00 0.00 0.00 3.21
426 427 2.359531 CCCACTCCGTTTTTAAAGCACA 59.640 45.455 0.00 0.00 0.00 4.57
427 428 2.359848 ACCCACTCCGTTTTTAAAGCAC 59.640 45.455 0.00 0.00 0.00 4.40
428 429 2.657143 ACCCACTCCGTTTTTAAAGCA 58.343 42.857 0.00 0.00 0.00 3.91
429 430 3.565063 TGTACCCACTCCGTTTTTAAAGC 59.435 43.478 0.00 0.00 0.00 3.51
430 431 5.754543 TTGTACCCACTCCGTTTTTAAAG 57.245 39.130 0.00 0.00 0.00 1.85
431 432 6.152492 AGTTTTGTACCCACTCCGTTTTTAAA 59.848 34.615 0.00 0.00 0.00 1.52
432 433 5.651576 AGTTTTGTACCCACTCCGTTTTTAA 59.348 36.000 0.00 0.00 0.00 1.52
433 434 5.066246 CAGTTTTGTACCCACTCCGTTTTTA 59.934 40.000 0.00 0.00 0.00 1.52
434 435 4.018490 AGTTTTGTACCCACTCCGTTTTT 58.982 39.130 0.00 0.00 0.00 1.94
435 436 3.379057 CAGTTTTGTACCCACTCCGTTTT 59.621 43.478 0.00 0.00 0.00 2.43
436 437 2.946990 CAGTTTTGTACCCACTCCGTTT 59.053 45.455 0.00 0.00 0.00 3.60
437 438 2.171027 TCAGTTTTGTACCCACTCCGTT 59.829 45.455 0.00 0.00 0.00 4.44
438 439 1.764134 TCAGTTTTGTACCCACTCCGT 59.236 47.619 0.00 0.00 0.00 4.69
439 440 2.536761 TCAGTTTTGTACCCACTCCG 57.463 50.000 0.00 0.00 0.00 4.63
440 441 6.887626 TTTTATCAGTTTTGTACCCACTCC 57.112 37.500 0.00 0.00 0.00 3.85
441 442 7.708998 TGTTTTTATCAGTTTTGTACCCACTC 58.291 34.615 0.00 0.00 0.00 3.51
442 443 7.648039 TGTTTTTATCAGTTTTGTACCCACT 57.352 32.000 0.00 0.00 0.00 4.00
443 444 8.705048 TTTGTTTTTATCAGTTTTGTACCCAC 57.295 30.769 0.00 0.00 0.00 4.61
461 462 9.908152 GCCTTTTCATGTACTAGTATTTGTTTT 57.092 29.630 5.75 0.00 0.00 2.43
462 463 8.520351 GGCCTTTTCATGTACTAGTATTTGTTT 58.480 33.333 5.75 0.00 0.00 2.83
463 464 7.148306 CGGCCTTTTCATGTACTAGTATTTGTT 60.148 37.037 5.75 0.00 0.00 2.83
464 465 6.315393 CGGCCTTTTCATGTACTAGTATTTGT 59.685 38.462 5.75 0.00 0.00 2.83
465 466 6.537301 TCGGCCTTTTCATGTACTAGTATTTG 59.463 38.462 5.75 7.22 0.00 2.32
466 467 6.646267 TCGGCCTTTTCATGTACTAGTATTT 58.354 36.000 5.75 0.00 0.00 1.40
467 468 6.097839 TCTCGGCCTTTTCATGTACTAGTATT 59.902 38.462 5.75 0.00 0.00 1.89
468 469 5.597182 TCTCGGCCTTTTCATGTACTAGTAT 59.403 40.000 5.75 0.00 0.00 2.12
469 470 4.951715 TCTCGGCCTTTTCATGTACTAGTA 59.048 41.667 0.00 0.00 0.00 1.82
470 471 3.767673 TCTCGGCCTTTTCATGTACTAGT 59.232 43.478 0.00 0.00 0.00 2.57
471 472 4.386867 TCTCGGCCTTTTCATGTACTAG 57.613 45.455 0.00 0.00 0.00 2.57
472 473 4.811969 TTCTCGGCCTTTTCATGTACTA 57.188 40.909 0.00 0.00 0.00 1.82
473 474 3.695830 TTCTCGGCCTTTTCATGTACT 57.304 42.857 0.00 0.00 0.00 2.73
474 475 4.759516 TTTTCTCGGCCTTTTCATGTAC 57.240 40.909 0.00 0.00 0.00 2.90
475 476 5.975693 ATTTTTCTCGGCCTTTTCATGTA 57.024 34.783 0.00 0.00 0.00 2.29
476 477 4.871933 ATTTTTCTCGGCCTTTTCATGT 57.128 36.364 0.00 0.00 0.00 3.21
477 478 5.954335 AGTATTTTTCTCGGCCTTTTCATG 58.046 37.500 0.00 0.00 0.00 3.07
478 479 5.125578 GGAGTATTTTTCTCGGCCTTTTCAT 59.874 40.000 0.00 0.00 33.26 2.57
479 480 4.457949 GGAGTATTTTTCTCGGCCTTTTCA 59.542 41.667 0.00 0.00 33.26 2.69
480 481 4.142447 GGGAGTATTTTTCTCGGCCTTTTC 60.142 45.833 0.00 0.00 33.26 2.29
481 482 3.762288 GGGAGTATTTTTCTCGGCCTTTT 59.238 43.478 0.00 0.00 33.26 2.27
482 483 3.010250 AGGGAGTATTTTTCTCGGCCTTT 59.990 43.478 0.00 0.00 33.26 3.11
483 484 2.576648 AGGGAGTATTTTTCTCGGCCTT 59.423 45.455 0.00 0.00 33.26 4.35
484 485 2.170817 GAGGGAGTATTTTTCTCGGCCT 59.829 50.000 0.00 0.00 33.26 5.19
485 486 2.562635 GAGGGAGTATTTTTCTCGGCC 58.437 52.381 0.00 0.00 33.26 6.13
486 487 2.093128 TGGAGGGAGTATTTTTCTCGGC 60.093 50.000 0.00 0.00 33.26 5.54
487 488 3.906720 TGGAGGGAGTATTTTTCTCGG 57.093 47.619 0.00 0.00 33.26 4.63
488 489 4.816925 GGAATGGAGGGAGTATTTTTCTCG 59.183 45.833 0.00 0.00 33.26 4.04
489 490 5.755849 TGGAATGGAGGGAGTATTTTTCTC 58.244 41.667 0.00 0.00 0.00 2.87
490 491 5.796502 TGGAATGGAGGGAGTATTTTTCT 57.203 39.130 0.00 0.00 0.00 2.52
491 492 6.850752 TTTGGAATGGAGGGAGTATTTTTC 57.149 37.500 0.00 0.00 0.00 2.29
492 493 7.813087 AATTTGGAATGGAGGGAGTATTTTT 57.187 32.000 0.00 0.00 0.00 1.94
493 494 8.909423 TTAATTTGGAATGGAGGGAGTATTTT 57.091 30.769 0.00 0.00 0.00 1.82
494 495 9.506042 AATTAATTTGGAATGGAGGGAGTATTT 57.494 29.630 0.00 0.00 0.00 1.40
497 498 9.416284 GTTAATTAATTTGGAATGGAGGGAGTA 57.584 33.333 5.91 0.00 0.00 2.59
498 499 7.344612 GGTTAATTAATTTGGAATGGAGGGAGT 59.655 37.037 5.91 0.00 0.00 3.85
499 500 7.565029 AGGTTAATTAATTTGGAATGGAGGGAG 59.435 37.037 5.91 0.00 0.00 4.30
500 501 7.426667 AGGTTAATTAATTTGGAATGGAGGGA 58.573 34.615 5.91 0.00 0.00 4.20
501 502 7.675161 AGGTTAATTAATTTGGAATGGAGGG 57.325 36.000 5.91 0.00 0.00 4.30
502 503 7.920682 CGAAGGTTAATTAATTTGGAATGGAGG 59.079 37.037 5.91 0.00 0.00 4.30
503 504 8.466798 ACGAAGGTTAATTAATTTGGAATGGAG 58.533 33.333 5.91 0.00 0.00 3.86
504 505 8.356000 ACGAAGGTTAATTAATTTGGAATGGA 57.644 30.769 5.91 0.00 0.00 3.41
505 506 8.996024 AACGAAGGTTAATTAATTTGGAATGG 57.004 30.769 5.91 0.00 33.72 3.16
506 507 9.083080 GGAACGAAGGTTAATTAATTTGGAATG 57.917 33.333 5.91 0.00 36.24 2.67
507 508 8.808092 TGGAACGAAGGTTAATTAATTTGGAAT 58.192 29.630 5.91 0.00 36.24 3.01
508 509 8.179509 TGGAACGAAGGTTAATTAATTTGGAA 57.820 30.769 5.91 0.00 36.24 3.53
509 510 7.762588 TGGAACGAAGGTTAATTAATTTGGA 57.237 32.000 5.91 0.00 36.24 3.53
510 511 8.819643 TTTGGAACGAAGGTTAATTAATTTGG 57.180 30.769 5.91 4.04 36.24 3.28
519 520 9.911138 GGTTAATTAATTTGGAACGAAGGTTAA 57.089 29.630 5.91 0.00 36.24 2.01
520 521 9.299465 AGGTTAATTAATTTGGAACGAAGGTTA 57.701 29.630 5.91 0.00 36.24 2.85
521 522 8.185506 AGGTTAATTAATTTGGAACGAAGGTT 57.814 30.769 5.91 0.00 39.63 3.50
522 523 7.094075 GGAGGTTAATTAATTTGGAACGAAGGT 60.094 37.037 5.91 0.00 0.00 3.50
523 524 7.094118 TGGAGGTTAATTAATTTGGAACGAAGG 60.094 37.037 5.91 0.00 0.00 3.46
524 525 7.753580 GTGGAGGTTAATTAATTTGGAACGAAG 59.246 37.037 5.91 0.00 0.00 3.79
525 526 7.309316 GGTGGAGGTTAATTAATTTGGAACGAA 60.309 37.037 5.91 0.00 0.00 3.85
526 527 6.151480 GGTGGAGGTTAATTAATTTGGAACGA 59.849 38.462 5.91 0.00 0.00 3.85
527 528 6.152154 AGGTGGAGGTTAATTAATTTGGAACG 59.848 38.462 5.91 0.00 0.00 3.95
528 529 7.363530 GGAGGTGGAGGTTAATTAATTTGGAAC 60.364 40.741 5.91 5.01 0.00 3.62
529 530 6.666113 GGAGGTGGAGGTTAATTAATTTGGAA 59.334 38.462 5.91 0.00 0.00 3.53
530 531 6.192044 GGAGGTGGAGGTTAATTAATTTGGA 58.808 40.000 5.91 0.00 0.00 3.53
531 532 5.955355 TGGAGGTGGAGGTTAATTAATTTGG 59.045 40.000 5.91 0.00 0.00 3.28
532 533 7.660030 ATGGAGGTGGAGGTTAATTAATTTG 57.340 36.000 5.91 0.00 0.00 2.32
533 534 8.539544 CAAATGGAGGTGGAGGTTAATTAATTT 58.460 33.333 5.91 0.00 0.00 1.82
534 535 7.678171 ACAAATGGAGGTGGAGGTTAATTAATT 59.322 33.333 5.89 5.89 0.00 1.40
535 536 7.189087 ACAAATGGAGGTGGAGGTTAATTAAT 58.811 34.615 0.31 0.00 0.00 1.40
536 537 6.557568 ACAAATGGAGGTGGAGGTTAATTAA 58.442 36.000 0.00 0.00 0.00 1.40
537 538 6.011981 AGACAAATGGAGGTGGAGGTTAATTA 60.012 38.462 0.00 0.00 0.00 1.40
538 539 5.010708 ACAAATGGAGGTGGAGGTTAATT 57.989 39.130 0.00 0.00 0.00 1.40
539 540 4.292306 AGACAAATGGAGGTGGAGGTTAAT 59.708 41.667 0.00 0.00 0.00 1.40
540 541 3.655777 AGACAAATGGAGGTGGAGGTTAA 59.344 43.478 0.00 0.00 0.00 2.01
541 542 3.256704 AGACAAATGGAGGTGGAGGTTA 58.743 45.455 0.00 0.00 0.00 2.85
542 543 2.065799 AGACAAATGGAGGTGGAGGTT 58.934 47.619 0.00 0.00 0.00 3.50
543 544 1.747444 AGACAAATGGAGGTGGAGGT 58.253 50.000 0.00 0.00 0.00 3.85
544 545 3.107601 TCTAGACAAATGGAGGTGGAGG 58.892 50.000 0.00 0.00 0.00 4.30
545 546 3.515502 TGTCTAGACAAATGGAGGTGGAG 59.484 47.826 23.24 0.00 38.56 3.86
546 547 3.260884 GTGTCTAGACAAATGGAGGTGGA 59.739 47.826 26.74 0.00 43.77 4.02
547 548 3.007940 TGTGTCTAGACAAATGGAGGTGG 59.992 47.826 26.74 0.00 43.77 4.61
548 549 4.021104 TCTGTGTCTAGACAAATGGAGGTG 60.021 45.833 26.74 8.36 43.77 4.00
549 550 4.160329 TCTGTGTCTAGACAAATGGAGGT 58.840 43.478 26.74 0.00 43.77 3.85
550 551 4.808414 TCTGTGTCTAGACAAATGGAGG 57.192 45.455 26.74 9.78 43.77 4.30
551 552 8.954950 AAATATCTGTGTCTAGACAAATGGAG 57.045 34.615 26.74 16.27 43.77 3.86
573 574 8.915036 ACTGTGACGGAGAAAGTAGATATAAAT 58.085 33.333 0.00 0.00 0.00 1.40
574 575 8.289939 ACTGTGACGGAGAAAGTAGATATAAA 57.710 34.615 0.00 0.00 0.00 1.40
575 576 7.774157 AGACTGTGACGGAGAAAGTAGATATAA 59.226 37.037 0.00 0.00 0.00 0.98
576 577 7.281098 AGACTGTGACGGAGAAAGTAGATATA 58.719 38.462 0.00 0.00 0.00 0.86
577 578 6.123651 AGACTGTGACGGAGAAAGTAGATAT 58.876 40.000 0.00 0.00 0.00 1.63
578 579 5.498393 AGACTGTGACGGAGAAAGTAGATA 58.502 41.667 0.00 0.00 0.00 1.98
579 580 4.337145 AGACTGTGACGGAGAAAGTAGAT 58.663 43.478 0.00 0.00 0.00 1.98
580 581 3.752665 AGACTGTGACGGAGAAAGTAGA 58.247 45.455 0.00 0.00 0.00 2.59
581 582 5.624344 TTAGACTGTGACGGAGAAAGTAG 57.376 43.478 0.00 0.00 0.00 2.57
582 583 6.263842 TCTTTTAGACTGTGACGGAGAAAGTA 59.736 38.462 0.00 0.00 0.00 2.24
583 584 4.931661 TTTAGACTGTGACGGAGAAAGT 57.068 40.909 0.00 0.00 0.00 2.66
584 585 5.402867 GTCTTTTAGACTGTGACGGAGAAAG 59.597 44.000 0.00 3.31 41.88 2.62
585 586 5.163488 TGTCTTTTAGACTGTGACGGAGAAA 60.163 40.000 0.00 0.00 45.27 2.52
586 587 4.340097 TGTCTTTTAGACTGTGACGGAGAA 59.660 41.667 0.00 0.00 45.27 2.87
587 588 3.887110 TGTCTTTTAGACTGTGACGGAGA 59.113 43.478 0.00 0.00 45.27 3.71
588 589 3.982058 GTGTCTTTTAGACTGTGACGGAG 59.018 47.826 0.00 0.00 45.27 4.63
589 590 3.382227 TGTGTCTTTTAGACTGTGACGGA 59.618 43.478 0.00 0.00 45.27 4.69
590 591 3.713288 TGTGTCTTTTAGACTGTGACGG 58.287 45.455 8.18 0.00 45.27 4.79
591 592 5.907197 ATTGTGTCTTTTAGACTGTGACG 57.093 39.130 8.18 0.00 45.27 4.35
619 620 9.725019 CCTTATCTATTGTGGAAGTGCATATAA 57.275 33.333 0.00 0.00 0.00 0.98
620 621 8.880244 ACCTTATCTATTGTGGAAGTGCATATA 58.120 33.333 0.00 0.00 0.00 0.86
621 622 7.749666 ACCTTATCTATTGTGGAAGTGCATAT 58.250 34.615 0.00 0.00 0.00 1.78
622 623 7.136822 ACCTTATCTATTGTGGAAGTGCATA 57.863 36.000 0.00 0.00 0.00 3.14
623 624 6.006275 ACCTTATCTATTGTGGAAGTGCAT 57.994 37.500 0.00 0.00 0.00 3.96
624 625 5.435686 ACCTTATCTATTGTGGAAGTGCA 57.564 39.130 0.00 0.00 0.00 4.57
625 626 6.404734 CCAAACCTTATCTATTGTGGAAGTGC 60.405 42.308 0.00 0.00 0.00 4.40
626 627 6.659242 ACCAAACCTTATCTATTGTGGAAGTG 59.341 38.462 0.00 0.00 0.00 3.16
627 628 6.790319 ACCAAACCTTATCTATTGTGGAAGT 58.210 36.000 0.00 0.00 0.00 3.01
628 629 6.318900 GGACCAAACCTTATCTATTGTGGAAG 59.681 42.308 0.00 0.00 0.00 3.46
629 630 6.184789 GGACCAAACCTTATCTATTGTGGAA 58.815 40.000 0.00 0.00 0.00 3.53
630 631 5.251932 TGGACCAAACCTTATCTATTGTGGA 59.748 40.000 0.00 0.00 0.00 4.02
631 632 5.505780 TGGACCAAACCTTATCTATTGTGG 58.494 41.667 0.00 0.00 0.00 4.17
632 633 7.339212 TCATTGGACCAAACCTTATCTATTGTG 59.661 37.037 11.82 0.00 0.00 3.33
633 634 7.410174 TCATTGGACCAAACCTTATCTATTGT 58.590 34.615 11.82 0.00 0.00 2.71
634 635 7.880160 TCATTGGACCAAACCTTATCTATTG 57.120 36.000 11.82 0.27 0.00 1.90
635 636 7.342026 GGTTCATTGGACCAAACCTTATCTATT 59.658 37.037 11.82 0.00 38.48 1.73
636 637 6.833933 GGTTCATTGGACCAAACCTTATCTAT 59.166 38.462 11.82 0.00 38.48 1.98
637 638 6.184789 GGTTCATTGGACCAAACCTTATCTA 58.815 40.000 11.82 0.00 38.48 1.98
638 639 5.016831 GGTTCATTGGACCAAACCTTATCT 58.983 41.667 11.82 0.00 38.48 1.98
639 640 4.142469 CGGTTCATTGGACCAAACCTTATC 60.142 45.833 19.74 5.63 39.20 1.75
640 641 3.761752 CGGTTCATTGGACCAAACCTTAT 59.238 43.478 19.74 0.00 39.20 1.73
641 642 3.150767 CGGTTCATTGGACCAAACCTTA 58.849 45.455 19.74 0.00 39.20 2.69
642 643 1.960689 CGGTTCATTGGACCAAACCTT 59.039 47.619 19.74 0.00 39.20 3.50
643 644 1.133606 ACGGTTCATTGGACCAAACCT 60.134 47.619 19.74 8.21 39.20 3.50
644 645 1.000717 CACGGTTCATTGGACCAAACC 60.001 52.381 11.82 13.35 36.99 3.27
645 646 1.950909 TCACGGTTCATTGGACCAAAC 59.049 47.619 11.82 4.94 36.99 2.93
646 647 1.950909 GTCACGGTTCATTGGACCAAA 59.049 47.619 11.82 0.00 36.99 3.28
647 648 1.600023 GTCACGGTTCATTGGACCAA 58.400 50.000 14.59 9.92 36.99 3.67
648 649 0.601576 CGTCACGGTTCATTGGACCA 60.602 55.000 14.59 0.00 36.99 4.02
649 650 0.320073 TCGTCACGGTTCATTGGACC 60.320 55.000 3.78 3.78 0.00 4.46
650 651 1.459592 CTTCGTCACGGTTCATTGGAC 59.540 52.381 0.00 0.00 0.00 4.02
651 652 1.341852 TCTTCGTCACGGTTCATTGGA 59.658 47.619 0.00 0.00 0.00 3.53
652 653 1.790755 TCTTCGTCACGGTTCATTGG 58.209 50.000 0.00 0.00 0.00 3.16
653 654 3.247648 ACTTTCTTCGTCACGGTTCATTG 59.752 43.478 0.00 0.00 0.00 2.82
654 655 3.463944 ACTTTCTTCGTCACGGTTCATT 58.536 40.909 0.00 0.00 0.00 2.57
655 656 3.107642 ACTTTCTTCGTCACGGTTCAT 57.892 42.857 0.00 0.00 0.00 2.57
656 657 2.589798 ACTTTCTTCGTCACGGTTCA 57.410 45.000 0.00 0.00 0.00 3.18
657 658 3.636381 ACTACTTTCTTCGTCACGGTTC 58.364 45.455 0.00 0.00 0.00 3.62
658 659 3.067180 TGACTACTTTCTTCGTCACGGTT 59.933 43.478 0.00 0.00 32.00 4.44
659 660 2.620115 TGACTACTTTCTTCGTCACGGT 59.380 45.455 0.00 0.00 32.00 4.83
660 661 3.278367 TGACTACTTTCTTCGTCACGG 57.722 47.619 0.00 0.00 32.00 4.94
661 662 5.630896 TTTTGACTACTTTCTTCGTCACG 57.369 39.130 0.00 0.00 36.25 4.35
662 663 7.627340 TCATTTTTGACTACTTTCTTCGTCAC 58.373 34.615 0.00 0.00 36.25 3.67
663 664 7.780008 TCATTTTTGACTACTTTCTTCGTCA 57.220 32.000 0.00 0.00 34.85 4.35
664 665 9.159470 CTTTCATTTTTGACTACTTTCTTCGTC 57.841 33.333 0.00 0.00 0.00 4.20
665 666 8.674607 ACTTTCATTTTTGACTACTTTCTTCGT 58.325 29.630 0.00 0.00 0.00 3.85
666 667 9.159470 GACTTTCATTTTTGACTACTTTCTTCG 57.841 33.333 0.00 0.00 0.00 3.79
673 674 9.788960 GTTTCTTGACTTTCATTTTTGACTACT 57.211 29.630 0.00 0.00 0.00 2.57
674 675 9.788960 AGTTTCTTGACTTTCATTTTTGACTAC 57.211 29.630 0.00 0.00 0.00 2.73
676 677 9.143631 CAAGTTTCTTGACTTTCATTTTTGACT 57.856 29.630 3.73 0.00 37.76 3.41
677 678 8.382875 CCAAGTTTCTTGACTTTCATTTTTGAC 58.617 33.333 10.54 0.00 37.76 3.18
678 679 8.310382 TCCAAGTTTCTTGACTTTCATTTTTGA 58.690 29.630 10.54 0.00 37.76 2.69
679 680 8.477984 TCCAAGTTTCTTGACTTTCATTTTTG 57.522 30.769 10.54 0.00 37.76 2.44
680 681 8.935844 GTTCCAAGTTTCTTGACTTTCATTTTT 58.064 29.630 10.54 0.00 37.76 1.94
681 682 7.275560 CGTTCCAAGTTTCTTGACTTTCATTTT 59.724 33.333 10.54 0.00 37.76 1.82
687 688 5.163652 CCTTCGTTCCAAGTTTCTTGACTTT 60.164 40.000 10.54 0.00 37.76 2.66
696 697 2.650322 TGCTTCCTTCGTTCCAAGTTT 58.350 42.857 0.00 0.00 0.00 2.66
699 700 2.426522 TCATGCTTCCTTCGTTCCAAG 58.573 47.619 0.00 0.00 0.00 3.61
715 716 2.364324 CAGGGCTCCATTCCAATTCATG 59.636 50.000 0.00 0.00 0.00 3.07
722 723 3.743017 GGGCAGGGCTCCATTCCA 61.743 66.667 0.00 0.00 0.00 3.53
745 746 5.010617 GGGTCGGACGGGTATAAACTATAAA 59.989 44.000 1.43 0.00 0.00 1.40
746 747 4.522789 GGGTCGGACGGGTATAAACTATAA 59.477 45.833 1.43 0.00 0.00 0.98
747 748 4.079253 GGGTCGGACGGGTATAAACTATA 58.921 47.826 1.43 0.00 0.00 1.31
748 749 2.893489 GGGTCGGACGGGTATAAACTAT 59.107 50.000 1.43 0.00 0.00 2.12
749 750 2.091885 AGGGTCGGACGGGTATAAACTA 60.092 50.000 1.43 0.00 0.00 2.24
750 751 1.114627 GGGTCGGACGGGTATAAACT 58.885 55.000 1.43 0.00 0.00 2.66
751 752 1.114627 AGGGTCGGACGGGTATAAAC 58.885 55.000 1.43 0.00 0.00 2.01
811 812 2.342279 CAGACGCGAAACCTCCCA 59.658 61.111 15.93 0.00 0.00 4.37
1300 1303 3.482436 CGCTAGACCTAGACCAAGATCT 58.518 50.000 8.16 0.00 35.21 2.75
1371 1379 1.586028 CGGCCCAACCAAACATCAG 59.414 57.895 0.00 0.00 39.03 2.90
1396 1404 0.234625 GTGCAACAGAATCACGCGAA 59.765 50.000 15.93 0.00 36.32 4.70
1477 1485 3.317993 ACAACACATTTCTACCAACAGGC 59.682 43.478 0.00 0.00 0.00 4.85
1510 1521 3.949113 TCCTTTTGCGTAGGTCAGTTTTT 59.051 39.130 0.00 0.00 34.29 1.94
1511 1522 3.547746 TCCTTTTGCGTAGGTCAGTTTT 58.452 40.909 0.00 0.00 34.29 2.43
1809 1830 5.188327 TGCATAGAACAGAGACGATAAGG 57.812 43.478 0.00 0.00 0.00 2.69
1859 1881 9.025041 CAGTTTCTCCTGGTTTTAAAGGAATAT 57.975 33.333 0.00 0.00 42.03 1.28
1861 1883 6.839134 ACAGTTTCTCCTGGTTTTAAAGGAAT 59.161 34.615 0.00 0.00 42.03 3.01
1914 1944 2.019156 GCATAGAAGTTCAGGTGGGGC 61.019 57.143 5.50 0.00 0.00 5.80
1947 1977 4.960354 CGAAAAGCTTGCAGAGATTAATCG 59.040 41.667 9.78 14.20 37.10 3.34
1969 1999 4.199310 TCAGGGGAAAGAAATCTATTGCG 58.801 43.478 0.00 0.00 0.00 4.85
1976 2006 3.131755 CCTTGCATCAGGGGAAAGAAATC 59.868 47.826 0.00 0.00 0.00 2.17
2047 2077 3.190079 GCATGAGTTCACGAATGCTCTA 58.810 45.455 0.00 0.00 41.71 2.43
2070 2100 4.201822 GCCACATGAGGTTTCTTTATCGTC 60.202 45.833 11.07 0.00 0.00 4.20
2090 2120 1.368209 CTTGCACATGCCTTTGCCA 59.632 52.632 0.49 0.00 41.18 4.92
2124 2154 4.036380 GGTGCTAATTATTACCACACCAGC 59.964 45.833 16.09 4.44 44.32 4.85
2167 2197 4.767578 ATGAGGTACTGATGCATTGACT 57.232 40.909 0.00 0.00 41.55 3.41
2202 2232 9.713740 CAAATAGAGTAATGACAAATCTTGAGC 57.286 33.333 0.00 0.00 0.00 4.26
2218 2248 7.124298 ACCAGCTCTGTATCAACAAATAGAGTA 59.876 37.037 0.00 0.00 34.49 2.59
2219 2249 6.070538 ACCAGCTCTGTATCAACAAATAGAGT 60.071 38.462 0.00 0.00 34.49 3.24
2221 2251 6.299805 ACCAGCTCTGTATCAACAAATAGA 57.700 37.500 0.00 0.00 34.49 1.98
2222 2252 6.201806 GCTACCAGCTCTGTATCAACAAATAG 59.798 42.308 0.00 0.00 38.45 1.73
2223 2253 6.049149 GCTACCAGCTCTGTATCAACAAATA 58.951 40.000 0.00 0.00 38.45 1.40
2224 2254 4.878397 GCTACCAGCTCTGTATCAACAAAT 59.122 41.667 0.00 0.00 38.45 2.32
2227 2257 2.831526 TGCTACCAGCTCTGTATCAACA 59.168 45.455 0.00 0.00 42.97 3.33
2228 2258 3.526931 TGCTACCAGCTCTGTATCAAC 57.473 47.619 0.00 0.00 42.97 3.18
2229 2259 4.507710 CTTTGCTACCAGCTCTGTATCAA 58.492 43.478 5.52 5.52 42.97 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.