Multiple sequence alignment - TraesCS3A01G275200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G275200 chr3A 100.000 3308 0 0 1 3308 504806299 504802992 0.000000e+00 6109.0
1 TraesCS3A01G275200 chr3A 90.261 421 38 3 122 539 616965969 616965549 6.240000e-152 547.0
2 TraesCS3A01G275200 chr3D 90.309 1455 101 10 995 2416 381632803 381631356 0.000000e+00 1869.0
3 TraesCS3A01G275200 chr3D 93.612 814 39 7 2498 3308 381631357 381630554 0.000000e+00 1203.0
4 TraesCS3A01G275200 chr3D 79.842 253 21 14 599 832 381633127 381632886 1.230000e-34 158.0
5 TraesCS3A01G275200 chr3D 96.739 92 3 0 2415 2506 153849504 153849595 1.590000e-33 154.0
6 TraesCS3A01G275200 chr3B 90.637 1303 81 16 997 2269 497096078 497094787 0.000000e+00 1692.0
7 TraesCS3A01G275200 chr3B 92.519 802 41 11 2511 3308 497093602 497092816 0.000000e+00 1131.0
8 TraesCS3A01G275200 chr3B 84.615 221 7 7 547 750 497096785 497096575 9.370000e-46 195.0
9 TraesCS3A01G275200 chr3B 96.739 92 2 1 2411 2502 10358271 10358181 5.720000e-33 152.0
10 TraesCS3A01G275200 chr3B 97.778 45 1 0 788 832 497096276 497096232 9.840000e-11 78.7
11 TraesCS3A01G275200 chr5A 91.981 424 31 3 119 540 475524031 475524453 2.840000e-165 592.0
12 TraesCS3A01G275200 chr4A 91.059 425 36 2 118 540 641361088 641361512 1.030000e-159 573.0
13 TraesCS3A01G275200 chr4A 89.858 424 37 4 119 538 40196303 40196724 1.040000e-149 540.0
14 TraesCS3A01G275200 chr4A 89.535 430 37 5 119 542 599917232 599917659 3.760000e-149 538.0
15 TraesCS3A01G275200 chr4A 88.793 116 10 2 2390 2503 598314803 598314689 4.450000e-29 139.0
16 TraesCS3A01G275200 chr7A 90.995 422 36 2 119 538 218188197 218188618 4.790000e-158 568.0
17 TraesCS3A01G275200 chr7A 90.330 424 39 2 119 540 722081651 722081228 3.730000e-154 555.0
18 TraesCS3A01G275200 chr7A 90.024 421 40 2 119 538 635474534 635474953 8.070000e-151 544.0
19 TraesCS3A01G275200 chr7A 97.753 89 2 0 2415 2503 432392191 432392103 1.590000e-33 154.0
20 TraesCS3A01G275200 chr6A 89.835 423 41 2 118 538 590067911 590068333 2.900000e-150 542.0
21 TraesCS3A01G275200 chr5D 97.826 92 2 0 2408 2499 426992737 426992828 3.420000e-35 159.0
22 TraesCS3A01G275200 chr6B 98.837 86 1 0 2415 2500 580305339 580305424 1.590000e-33 154.0
23 TraesCS3A01G275200 chr6B 93.137 102 6 1 2403 2503 597986954 597987055 7.400000e-32 148.0
24 TraesCS3A01G275200 chr2A 97.753 89 2 0 2411 2499 597850417 597850505 1.590000e-33 154.0
25 TraesCS3A01G275200 chr2D 95.652 92 4 0 2415 2506 419467268 419467177 7.400000e-32 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G275200 chr3A 504802992 504806299 3307 True 6109.000000 6109 100.00000 1 3308 1 chr3A.!!$R1 3307
1 TraesCS3A01G275200 chr3D 381630554 381633127 2573 True 1076.666667 1869 87.92100 599 3308 3 chr3D.!!$R1 2709
2 TraesCS3A01G275200 chr3B 497092816 497096785 3969 True 774.175000 1692 91.38725 547 3308 4 chr3B.!!$R2 2761

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
247 248 0.034476 GGGTATAACAGCCTACCGCC 59.966 60.0 0.00 0.00 41.95 6.13 F
391 392 0.096454 GTTGGCGGTAGCGATGTTTC 59.904 55.0 20.16 0.00 46.35 2.78 F
394 395 0.103572 GGCGGTAGCGATGTTTCCTA 59.896 55.0 20.16 0.00 46.35 2.94 F
442 443 0.105453 AGACCCTATCGCCATGGAGT 60.105 55.0 18.40 5.86 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1932 2300 0.318762 AAGGGTCACGCTCAAGAGAC 59.681 55.000 0.00 0.0 0.00 3.36 R
1969 2337 1.856014 GCGTGCATTTGTAAGATCGGC 60.856 52.381 0.00 0.0 0.00 5.54 R
2161 2532 1.984570 TGCTAGCCGAAGAGCAGGT 60.985 57.895 13.29 0.0 43.64 4.00 R
2321 3561 2.170187 TGCATTTTCAGGGCAACAAGTT 59.830 40.909 0.00 0.0 34.05 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.731089 ACGAAAGAAATACCACGAACCA 58.269 40.909 0.00 0.00 0.00 3.67
22 23 4.128643 ACGAAAGAAATACCACGAACCAA 58.871 39.130 0.00 0.00 0.00 3.67
23 24 4.575645 ACGAAAGAAATACCACGAACCAAA 59.424 37.500 0.00 0.00 0.00 3.28
24 25 5.239963 ACGAAAGAAATACCACGAACCAAAT 59.760 36.000 0.00 0.00 0.00 2.32
25 26 6.427547 ACGAAAGAAATACCACGAACCAAATA 59.572 34.615 0.00 0.00 0.00 1.40
26 27 7.041235 ACGAAAGAAATACCACGAACCAAATAA 60.041 33.333 0.00 0.00 0.00 1.40
27 28 7.966204 CGAAAGAAATACCACGAACCAAATAAT 59.034 33.333 0.00 0.00 0.00 1.28
28 29 8.980143 AAAGAAATACCACGAACCAAATAATG 57.020 30.769 0.00 0.00 0.00 1.90
29 30 6.560711 AGAAATACCACGAACCAAATAATGC 58.439 36.000 0.00 0.00 0.00 3.56
30 31 6.377146 AGAAATACCACGAACCAAATAATGCT 59.623 34.615 0.00 0.00 0.00 3.79
31 32 3.848272 ACCACGAACCAAATAATGCTG 57.152 42.857 0.00 0.00 0.00 4.41
32 33 3.153919 ACCACGAACCAAATAATGCTGT 58.846 40.909 0.00 0.00 0.00 4.40
33 34 4.328536 ACCACGAACCAAATAATGCTGTA 58.671 39.130 0.00 0.00 0.00 2.74
34 35 4.762765 ACCACGAACCAAATAATGCTGTAA 59.237 37.500 0.00 0.00 0.00 2.41
35 36 5.092781 CCACGAACCAAATAATGCTGTAAC 58.907 41.667 0.00 0.00 0.00 2.50
36 37 4.786068 CACGAACCAAATAATGCTGTAACG 59.214 41.667 0.00 0.00 0.00 3.18
37 38 4.691685 ACGAACCAAATAATGCTGTAACGA 59.308 37.500 0.00 0.00 0.00 3.85
38 39 5.019498 CGAACCAAATAATGCTGTAACGAC 58.981 41.667 0.00 0.00 0.00 4.34
39 40 5.163893 CGAACCAAATAATGCTGTAACGACT 60.164 40.000 0.00 0.00 0.00 4.18
40 41 6.035220 CGAACCAAATAATGCTGTAACGACTA 59.965 38.462 0.00 0.00 0.00 2.59
41 42 7.412129 CGAACCAAATAATGCTGTAACGACTAA 60.412 37.037 0.00 0.00 0.00 2.24
42 43 7.675962 ACCAAATAATGCTGTAACGACTAAA 57.324 32.000 0.00 0.00 0.00 1.85
43 44 7.748847 ACCAAATAATGCTGTAACGACTAAAG 58.251 34.615 0.00 0.00 0.00 1.85
44 45 7.389607 ACCAAATAATGCTGTAACGACTAAAGT 59.610 33.333 0.00 0.00 0.00 2.66
45 46 8.234546 CCAAATAATGCTGTAACGACTAAAGTT 58.765 33.333 0.00 0.00 35.75 2.66
46 47 9.051027 CAAATAATGCTGTAACGACTAAAGTTG 57.949 33.333 0.00 0.00 33.42 3.16
47 48 5.607119 AATGCTGTAACGACTAAAGTTGG 57.393 39.130 2.52 0.00 33.72 3.77
48 49 4.062677 TGCTGTAACGACTAAAGTTGGT 57.937 40.909 2.52 0.00 33.72 3.67
49 50 4.444536 TGCTGTAACGACTAAAGTTGGTT 58.555 39.130 2.52 4.52 33.72 3.67
50 51 4.271533 TGCTGTAACGACTAAAGTTGGTTG 59.728 41.667 2.52 0.00 33.72 3.77
51 52 4.319261 GCTGTAACGACTAAAGTTGGTTGG 60.319 45.833 2.52 0.36 33.72 3.77
52 53 5.021033 TGTAACGACTAAAGTTGGTTGGA 57.979 39.130 2.52 0.00 33.72 3.53
53 54 5.426504 TGTAACGACTAAAGTTGGTTGGAA 58.573 37.500 2.52 0.00 33.72 3.53
54 55 4.888038 AACGACTAAAGTTGGTTGGAAC 57.112 40.909 2.52 0.00 33.72 3.62
55 56 2.867975 ACGACTAAAGTTGGTTGGAACG 59.132 45.455 2.52 0.00 33.72 3.95
56 57 3.125316 CGACTAAAGTTGGTTGGAACGA 58.875 45.455 0.00 0.00 0.00 3.85
57 58 3.556775 CGACTAAAGTTGGTTGGAACGAA 59.443 43.478 0.00 0.00 0.00 3.85
58 59 4.034279 CGACTAAAGTTGGTTGGAACGAAA 59.966 41.667 0.00 0.00 0.00 3.46
59 60 5.239359 ACTAAAGTTGGTTGGAACGAAAC 57.761 39.130 0.00 0.00 0.00 2.78
60 61 4.701171 ACTAAAGTTGGTTGGAACGAAACA 59.299 37.500 0.00 0.00 32.04 2.83
61 62 3.497297 AAGTTGGTTGGAACGAAACAC 57.503 42.857 0.00 0.00 32.04 3.32
62 63 2.718563 AGTTGGTTGGAACGAAACACT 58.281 42.857 0.00 0.00 32.04 3.55
63 64 3.086282 AGTTGGTTGGAACGAAACACTT 58.914 40.909 0.00 0.00 32.04 3.16
64 65 3.128068 AGTTGGTTGGAACGAAACACTTC 59.872 43.478 0.00 0.00 32.04 3.01
65 66 2.712709 TGGTTGGAACGAAACACTTCA 58.287 42.857 0.00 0.00 0.00 3.02
66 67 3.082548 TGGTTGGAACGAAACACTTCAA 58.917 40.909 0.00 0.00 0.00 2.69
67 68 3.119779 TGGTTGGAACGAAACACTTCAAC 60.120 43.478 0.00 0.00 0.00 3.18
68 69 3.431856 GTTGGAACGAAACACTTCAACC 58.568 45.455 0.00 0.00 0.00 3.77
69 70 2.018515 TGGAACGAAACACTTCAACCC 58.981 47.619 0.00 0.00 0.00 4.11
70 71 2.018515 GGAACGAAACACTTCAACCCA 58.981 47.619 0.00 0.00 0.00 4.51
71 72 2.621526 GGAACGAAACACTTCAACCCAT 59.378 45.455 0.00 0.00 0.00 4.00
72 73 3.067601 GGAACGAAACACTTCAACCCATT 59.932 43.478 0.00 0.00 0.00 3.16
73 74 3.708563 ACGAAACACTTCAACCCATTG 57.291 42.857 0.00 0.00 37.14 2.82
74 75 3.020984 ACGAAACACTTCAACCCATTGT 58.979 40.909 0.00 0.00 37.11 2.71
75 76 3.445805 ACGAAACACTTCAACCCATTGTT 59.554 39.130 0.00 0.00 37.11 2.83
76 77 4.641094 ACGAAACACTTCAACCCATTGTTA 59.359 37.500 0.00 0.00 37.11 2.41
77 78 5.300792 ACGAAACACTTCAACCCATTGTTAT 59.699 36.000 0.00 0.00 37.11 1.89
78 79 6.487331 ACGAAACACTTCAACCCATTGTTATA 59.513 34.615 0.00 0.00 37.11 0.98
79 80 7.175990 ACGAAACACTTCAACCCATTGTTATAT 59.824 33.333 0.00 0.00 37.11 0.86
80 81 7.484641 CGAAACACTTCAACCCATTGTTATATG 59.515 37.037 0.00 0.00 37.11 1.78
81 82 6.207691 ACACTTCAACCCATTGTTATATGC 57.792 37.500 0.00 0.00 37.11 3.14
82 83 5.714333 ACACTTCAACCCATTGTTATATGCA 59.286 36.000 0.00 0.00 37.11 3.96
83 84 6.210385 ACACTTCAACCCATTGTTATATGCAA 59.790 34.615 0.00 0.00 37.11 4.08
84 85 6.753279 CACTTCAACCCATTGTTATATGCAAG 59.247 38.462 0.00 0.00 37.11 4.01
85 86 5.261209 TCAACCCATTGTTATATGCAAGC 57.739 39.130 0.00 0.00 37.11 4.01
86 87 4.955450 TCAACCCATTGTTATATGCAAGCT 59.045 37.500 0.00 0.00 37.11 3.74
87 88 4.924305 ACCCATTGTTATATGCAAGCTG 57.076 40.909 0.00 0.00 0.00 4.24
88 89 3.068590 ACCCATTGTTATATGCAAGCTGC 59.931 43.478 0.00 0.00 45.29 5.25
89 90 3.319972 CCCATTGTTATATGCAAGCTGCT 59.680 43.478 0.00 0.00 45.31 4.24
90 91 4.543692 CCATTGTTATATGCAAGCTGCTC 58.456 43.478 1.00 0.00 45.31 4.26
91 92 3.950087 TTGTTATATGCAAGCTGCTCG 57.050 42.857 1.00 0.00 45.31 5.03
92 93 2.905075 TGTTATATGCAAGCTGCTCGT 58.095 42.857 1.00 0.00 45.31 4.18
93 94 2.609002 TGTTATATGCAAGCTGCTCGTG 59.391 45.455 1.00 0.00 45.31 4.35
97 98 3.112075 GCAAGCTGCTCGTGCGTA 61.112 61.111 10.25 0.00 40.14 4.42
98 99 2.772189 CAAGCTGCTCGTGCGTAC 59.228 61.111 1.00 0.00 43.34 3.67
99 100 1.734477 CAAGCTGCTCGTGCGTACT 60.734 57.895 1.00 0.00 43.34 2.73
100 101 1.444553 AAGCTGCTCGTGCGTACTC 60.445 57.895 1.00 0.00 43.34 2.59
101 102 2.126463 GCTGCTCGTGCGTACTCA 60.126 61.111 4.84 0.00 43.34 3.41
102 103 1.733041 GCTGCTCGTGCGTACTCAA 60.733 57.895 4.84 0.00 43.34 3.02
103 104 1.945776 GCTGCTCGTGCGTACTCAAC 61.946 60.000 4.84 0.00 43.34 3.18
104 105 1.344942 CTGCTCGTGCGTACTCAACC 61.345 60.000 4.84 0.00 43.34 3.77
105 106 1.372499 GCTCGTGCGTACTCAACCA 60.372 57.895 1.24 0.00 0.00 3.67
106 107 1.615107 GCTCGTGCGTACTCAACCAC 61.615 60.000 1.24 0.00 0.00 4.16
107 108 0.039437 CTCGTGCGTACTCAACCACT 60.039 55.000 1.24 0.00 31.08 4.00
108 109 0.318360 TCGTGCGTACTCAACCACTG 60.318 55.000 1.24 0.00 31.08 3.66
109 110 1.282248 CGTGCGTACTCAACCACTGG 61.282 60.000 1.24 0.00 31.08 4.00
110 111 1.301401 TGCGTACTCAACCACTGGC 60.301 57.895 0.00 0.00 0.00 4.85
111 112 1.301401 GCGTACTCAACCACTGGCA 60.301 57.895 0.00 0.00 0.00 4.92
112 113 0.673644 GCGTACTCAACCACTGGCAT 60.674 55.000 0.00 0.00 0.00 4.40
113 114 1.808411 CGTACTCAACCACTGGCATT 58.192 50.000 0.00 0.00 0.00 3.56
114 115 1.464608 CGTACTCAACCACTGGCATTG 59.535 52.381 0.00 0.00 0.00 2.82
115 116 2.778299 GTACTCAACCACTGGCATTGA 58.222 47.619 6.39 3.79 0.00 2.57
116 117 2.592102 ACTCAACCACTGGCATTGAT 57.408 45.000 6.39 0.00 32.16 2.57
117 118 3.719268 ACTCAACCACTGGCATTGATA 57.281 42.857 6.39 0.00 32.16 2.15
118 119 3.614092 ACTCAACCACTGGCATTGATAG 58.386 45.455 6.39 1.14 32.16 2.08
119 120 2.947652 CTCAACCACTGGCATTGATAGG 59.052 50.000 6.39 0.00 32.16 2.57
120 121 1.406539 CAACCACTGGCATTGATAGGC 59.593 52.381 6.39 0.00 0.00 3.93
121 122 0.921896 ACCACTGGCATTGATAGGCT 59.078 50.000 6.39 0.00 0.00 4.58
122 123 2.126882 ACCACTGGCATTGATAGGCTA 58.873 47.619 6.39 0.00 0.00 3.93
123 124 2.509548 ACCACTGGCATTGATAGGCTAA 59.490 45.455 6.39 0.00 0.00 3.09
124 125 3.053693 ACCACTGGCATTGATAGGCTAAA 60.054 43.478 6.39 0.00 0.00 1.85
125 126 4.147321 CCACTGGCATTGATAGGCTAAAT 58.853 43.478 6.39 0.00 0.00 1.40
126 127 4.586001 CCACTGGCATTGATAGGCTAAATT 59.414 41.667 6.39 0.00 0.00 1.82
127 128 5.069516 CCACTGGCATTGATAGGCTAAATTT 59.930 40.000 6.39 0.00 0.00 1.82
128 129 6.211515 CACTGGCATTGATAGGCTAAATTTC 58.788 40.000 0.00 0.00 0.00 2.17
129 130 5.893255 ACTGGCATTGATAGGCTAAATTTCA 59.107 36.000 0.00 0.00 0.00 2.69
130 131 6.552350 ACTGGCATTGATAGGCTAAATTTCAT 59.448 34.615 0.00 0.00 0.00 2.57
131 132 6.751157 TGGCATTGATAGGCTAAATTTCATG 58.249 36.000 0.00 0.67 0.00 3.07
132 133 6.324512 TGGCATTGATAGGCTAAATTTCATGT 59.675 34.615 0.00 0.00 0.00 3.21
133 134 7.147689 TGGCATTGATAGGCTAAATTTCATGTT 60.148 33.333 0.00 0.00 0.00 2.71
134 135 7.712205 GGCATTGATAGGCTAAATTTCATGTTT 59.288 33.333 0.00 0.00 0.00 2.83
135 136 9.101655 GCATTGATAGGCTAAATTTCATGTTTT 57.898 29.630 0.00 0.00 0.00 2.43
138 139 9.638239 TTGATAGGCTAAATTTCATGTTTTGAC 57.362 29.630 0.00 0.00 32.84 3.18
139 140 8.250332 TGATAGGCTAAATTTCATGTTTTGACC 58.750 33.333 0.00 0.00 32.84 4.02
140 141 5.793817 AGGCTAAATTTCATGTTTTGACCC 58.206 37.500 0.00 0.00 32.84 4.46
141 142 5.543790 AGGCTAAATTTCATGTTTTGACCCT 59.456 36.000 0.00 0.00 32.84 4.34
142 143 6.043127 AGGCTAAATTTCATGTTTTGACCCTT 59.957 34.615 0.00 0.00 32.84 3.95
143 144 6.710295 GGCTAAATTTCATGTTTTGACCCTTT 59.290 34.615 0.00 0.00 32.84 3.11
144 145 7.228507 GGCTAAATTTCATGTTTTGACCCTTTT 59.771 33.333 0.00 0.00 32.84 2.27
145 146 8.282592 GCTAAATTTCATGTTTTGACCCTTTTC 58.717 33.333 0.00 0.00 32.84 2.29
146 147 9.546428 CTAAATTTCATGTTTTGACCCTTTTCT 57.454 29.630 0.00 0.00 32.84 2.52
148 149 9.898152 AAATTTCATGTTTTGACCCTTTTCTAA 57.102 25.926 0.00 0.00 32.84 2.10
149 150 9.898152 AATTTCATGTTTTGACCCTTTTCTAAA 57.102 25.926 0.00 0.00 32.84 1.85
150 151 9.898152 ATTTCATGTTTTGACCCTTTTCTAAAA 57.102 25.926 0.00 0.00 32.84 1.52
151 152 8.710835 TTCATGTTTTGACCCTTTTCTAAAAC 57.289 30.769 0.00 0.00 40.05 2.43
152 153 7.269316 TCATGTTTTGACCCTTTTCTAAAACC 58.731 34.615 0.00 0.00 39.32 3.27
153 154 6.860790 TGTTTTGACCCTTTTCTAAAACCT 57.139 33.333 0.00 0.00 39.32 3.50
154 155 7.957992 TGTTTTGACCCTTTTCTAAAACCTA 57.042 32.000 0.00 0.00 39.32 3.08
155 156 8.541899 TGTTTTGACCCTTTTCTAAAACCTAT 57.458 30.769 0.00 0.00 39.32 2.57
156 157 8.983789 TGTTTTGACCCTTTTCTAAAACCTATT 58.016 29.630 0.00 0.00 39.32 1.73
157 158 9.472361 GTTTTGACCCTTTTCTAAAACCTATTC 57.528 33.333 0.00 0.00 36.01 1.75
158 159 7.443259 TTGACCCTTTTCTAAAACCTATTCG 57.557 36.000 0.00 0.00 0.00 3.34
159 160 6.771573 TGACCCTTTTCTAAAACCTATTCGA 58.228 36.000 0.00 0.00 0.00 3.71
160 161 6.877322 TGACCCTTTTCTAAAACCTATTCGAG 59.123 38.462 0.00 0.00 0.00 4.04
161 162 7.012661 ACCCTTTTCTAAAACCTATTCGAGA 57.987 36.000 0.00 0.00 0.00 4.04
162 163 7.631007 ACCCTTTTCTAAAACCTATTCGAGAT 58.369 34.615 0.00 0.00 0.00 2.75
163 164 8.107729 ACCCTTTTCTAAAACCTATTCGAGATT 58.892 33.333 0.00 0.00 0.00 2.40
164 165 8.957466 CCCTTTTCTAAAACCTATTCGAGATTT 58.043 33.333 0.00 0.00 0.00 2.17
165 166 9.774742 CCTTTTCTAAAACCTATTCGAGATTTG 57.225 33.333 0.00 0.00 0.00 2.32
169 170 8.888579 TCTAAAACCTATTCGAGATTTGATCC 57.111 34.615 0.00 0.00 0.00 3.36
170 171 8.705594 TCTAAAACCTATTCGAGATTTGATCCT 58.294 33.333 0.00 0.00 0.00 3.24
171 172 9.982651 CTAAAACCTATTCGAGATTTGATCCTA 57.017 33.333 0.00 0.00 0.00 2.94
173 174 9.853177 AAAACCTATTCGAGATTTGATCCTAAT 57.147 29.630 0.00 0.00 0.00 1.73
174 175 9.853177 AAACCTATTCGAGATTTGATCCTAATT 57.147 29.630 0.00 0.00 0.00 1.40
175 176 9.853177 AACCTATTCGAGATTTGATCCTAATTT 57.147 29.630 0.00 0.00 0.00 1.82
176 177 9.277783 ACCTATTCGAGATTTGATCCTAATTTG 57.722 33.333 0.00 0.00 0.00 2.32
177 178 9.494271 CCTATTCGAGATTTGATCCTAATTTGA 57.506 33.333 0.00 0.00 0.00 2.69
204 205 5.747951 AAATCGAGATCTGATCCTTTTGC 57.252 39.130 13.83 0.00 0.00 3.68
205 206 4.686191 ATCGAGATCTGATCCTTTTGCT 57.314 40.909 13.83 0.00 0.00 3.91
206 207 5.798125 ATCGAGATCTGATCCTTTTGCTA 57.202 39.130 13.83 0.00 0.00 3.49
207 208 4.938080 TCGAGATCTGATCCTTTTGCTAC 58.062 43.478 13.83 0.00 0.00 3.58
208 209 4.054671 CGAGATCTGATCCTTTTGCTACC 58.945 47.826 13.83 0.00 0.00 3.18
209 210 4.054671 GAGATCTGATCCTTTTGCTACCG 58.945 47.826 13.83 0.00 0.00 4.02
210 211 3.452627 AGATCTGATCCTTTTGCTACCGT 59.547 43.478 13.83 0.00 0.00 4.83
211 212 3.247006 TCTGATCCTTTTGCTACCGTC 57.753 47.619 0.00 0.00 0.00 4.79
212 213 2.565391 TCTGATCCTTTTGCTACCGTCA 59.435 45.455 0.00 0.00 0.00 4.35
213 214 2.932614 CTGATCCTTTTGCTACCGTCAG 59.067 50.000 0.00 0.00 0.00 3.51
214 215 2.280628 GATCCTTTTGCTACCGTCAGG 58.719 52.381 0.00 0.00 45.13 3.86
215 216 0.323629 TCCTTTTGCTACCGTCAGGG 59.676 55.000 0.00 0.00 43.47 4.45
216 217 0.323629 CCTTTTGCTACCGTCAGGGA 59.676 55.000 0.00 0.00 43.47 4.20
217 218 1.065418 CCTTTTGCTACCGTCAGGGAT 60.065 52.381 0.00 0.00 43.47 3.85
218 219 2.280628 CTTTTGCTACCGTCAGGGATC 58.719 52.381 0.00 0.00 43.47 3.36
219 220 1.271856 TTTGCTACCGTCAGGGATCA 58.728 50.000 0.00 0.00 43.47 2.92
220 221 1.496060 TTGCTACCGTCAGGGATCAT 58.504 50.000 0.00 0.00 43.47 2.45
221 222 0.752658 TGCTACCGTCAGGGATCATG 59.247 55.000 0.00 0.00 43.47 3.07
222 223 1.040646 GCTACCGTCAGGGATCATGA 58.959 55.000 0.00 0.00 43.47 3.07
223 224 1.269831 GCTACCGTCAGGGATCATGAC 60.270 57.143 16.47 16.47 42.94 3.06
228 229 2.802787 GTCAGGGATCATGACGGTAG 57.197 55.000 12.81 0.00 37.88 3.18
229 230 1.341531 GTCAGGGATCATGACGGTAGG 59.658 57.143 12.81 0.00 37.88 3.18
230 231 0.681733 CAGGGATCATGACGGTAGGG 59.318 60.000 0.00 0.00 0.00 3.53
231 232 0.264955 AGGGATCATGACGGTAGGGT 59.735 55.000 0.00 0.00 0.00 4.34
232 233 1.502039 AGGGATCATGACGGTAGGGTA 59.498 52.381 0.00 0.00 0.00 3.69
233 234 2.111972 AGGGATCATGACGGTAGGGTAT 59.888 50.000 0.00 0.00 0.00 2.73
234 235 3.335786 AGGGATCATGACGGTAGGGTATA 59.664 47.826 0.00 0.00 0.00 1.47
235 236 4.091549 GGGATCATGACGGTAGGGTATAA 58.908 47.826 0.00 0.00 0.00 0.98
236 237 4.081807 GGGATCATGACGGTAGGGTATAAC 60.082 50.000 0.00 0.00 0.00 1.89
237 238 4.525487 GGATCATGACGGTAGGGTATAACA 59.475 45.833 0.00 0.00 0.00 2.41
238 239 5.336531 GGATCATGACGGTAGGGTATAACAG 60.337 48.000 0.00 0.00 0.00 3.16
239 240 3.319972 TCATGACGGTAGGGTATAACAGC 59.680 47.826 0.00 0.00 0.00 4.40
240 241 2.034124 TGACGGTAGGGTATAACAGCC 58.966 52.381 0.00 0.00 45.89 4.85
246 247 3.601277 GGGTATAACAGCCTACCGC 57.399 57.895 0.00 0.00 41.95 5.68
247 248 0.034476 GGGTATAACAGCCTACCGCC 59.966 60.000 0.00 0.00 41.95 6.13
248 249 0.754472 GGTATAACAGCCTACCGCCA 59.246 55.000 0.00 0.00 38.78 5.69
249 250 1.139455 GGTATAACAGCCTACCGCCAA 59.861 52.381 0.00 0.00 38.78 4.52
250 251 2.480845 GTATAACAGCCTACCGCCAAG 58.519 52.381 0.00 0.00 38.78 3.61
263 264 3.006728 CCAAGGTCCCTGGCGGTA 61.007 66.667 0.00 0.00 0.00 4.02
264 265 2.584608 CAAGGTCCCTGGCGGTAG 59.415 66.667 0.00 0.00 0.00 3.18
265 266 2.687566 AAGGTCCCTGGCGGTAGG 60.688 66.667 0.00 0.00 37.59 3.18
271 272 4.028490 CCTGGCGGTAGGGTTGCA 62.028 66.667 0.00 0.00 34.06 4.08
272 273 2.272146 CTGGCGGTAGGGTTGCAT 59.728 61.111 0.00 0.00 0.00 3.96
273 274 2.045438 TGGCGGTAGGGTTGCATG 60.045 61.111 0.00 0.00 0.00 4.06
274 275 3.518068 GGCGGTAGGGTTGCATGC 61.518 66.667 11.82 11.82 0.00 4.06
275 276 3.518068 GCGGTAGGGTTGCATGCC 61.518 66.667 16.68 0.00 0.00 4.40
276 277 2.272146 CGGTAGGGTTGCATGCCT 59.728 61.111 16.68 7.36 0.00 4.75
277 278 1.524961 CGGTAGGGTTGCATGCCTA 59.475 57.895 16.68 6.26 0.00 3.93
278 279 0.814010 CGGTAGGGTTGCATGCCTAC 60.814 60.000 16.68 17.69 35.69 3.18
279 280 0.546598 GGTAGGGTTGCATGCCTACT 59.453 55.000 22.81 15.48 36.40 2.57
280 281 1.766496 GGTAGGGTTGCATGCCTACTA 59.234 52.381 22.81 14.68 36.40 1.82
281 282 2.484947 GGTAGGGTTGCATGCCTACTAC 60.485 54.545 22.81 21.95 36.40 2.73
282 283 0.546598 AGGGTTGCATGCCTACTACC 59.453 55.000 16.68 13.79 0.00 3.18
283 284 0.254747 GGGTTGCATGCCTACTACCA 59.745 55.000 16.68 0.00 0.00 3.25
284 285 1.340600 GGGTTGCATGCCTACTACCAA 60.341 52.381 16.68 0.00 0.00 3.67
285 286 2.442413 GGTTGCATGCCTACTACCAAA 58.558 47.619 16.68 0.00 0.00 3.28
286 287 2.823154 GGTTGCATGCCTACTACCAAAA 59.177 45.455 16.68 0.00 0.00 2.44
287 288 3.257127 GGTTGCATGCCTACTACCAAAAA 59.743 43.478 16.68 0.00 0.00 1.94
288 289 4.234574 GTTGCATGCCTACTACCAAAAAC 58.765 43.478 16.68 4.29 0.00 2.43
289 290 2.823154 TGCATGCCTACTACCAAAAACC 59.177 45.455 16.68 0.00 0.00 3.27
290 291 3.089284 GCATGCCTACTACCAAAAACCT 58.911 45.455 6.36 0.00 0.00 3.50
291 292 3.509967 GCATGCCTACTACCAAAAACCTT 59.490 43.478 6.36 0.00 0.00 3.50
292 293 4.021456 GCATGCCTACTACCAAAAACCTTT 60.021 41.667 6.36 0.00 0.00 3.11
293 294 5.510690 GCATGCCTACTACCAAAAACCTTTT 60.511 40.000 6.36 0.00 0.00 2.27
294 295 6.294843 GCATGCCTACTACCAAAAACCTTTTA 60.295 38.462 6.36 0.00 0.00 1.52
295 296 7.662897 CATGCCTACTACCAAAAACCTTTTAA 58.337 34.615 0.00 0.00 0.00 1.52
296 297 7.279750 TGCCTACTACCAAAAACCTTTTAAG 57.720 36.000 0.00 0.00 0.00 1.85
297 298 6.834969 TGCCTACTACCAAAAACCTTTTAAGT 59.165 34.615 0.00 0.00 0.00 2.24
298 299 7.997803 TGCCTACTACCAAAAACCTTTTAAGTA 59.002 33.333 0.00 0.00 0.00 2.24
299 300 9.017509 GCCTACTACCAAAAACCTTTTAAGTAT 57.982 33.333 0.00 0.00 0.00 2.12
306 307 9.373603 ACCAAAAACCTTTTAAGTATTGAACAC 57.626 29.630 0.00 0.00 0.00 3.32
307 308 9.594478 CCAAAAACCTTTTAAGTATTGAACACT 57.406 29.630 0.00 0.00 0.00 3.55
310 311 9.581099 AAAACCTTTTAAGTATTGAACACTGTG 57.419 29.630 6.19 6.19 0.00 3.66
311 312 6.735130 ACCTTTTAAGTATTGAACACTGTGC 58.265 36.000 7.90 0.00 0.00 4.57
312 313 5.851177 CCTTTTAAGTATTGAACACTGTGCG 59.149 40.000 7.90 0.00 0.00 5.34
313 314 5.994887 TTTAAGTATTGAACACTGTGCGT 57.005 34.783 7.90 0.00 0.00 5.24
321 322 2.961721 CACTGTGCGTGCTCGTGT 60.962 61.111 10.18 1.83 36.72 4.49
322 323 2.658593 ACTGTGCGTGCTCGTGTC 60.659 61.111 10.18 1.83 39.49 3.67
323 324 2.355126 CTGTGCGTGCTCGTGTCT 60.355 61.111 10.18 0.00 39.49 3.41
324 325 1.081442 CTGTGCGTGCTCGTGTCTA 60.081 57.895 10.18 0.00 39.49 2.59
325 326 1.337817 CTGTGCGTGCTCGTGTCTAC 61.338 60.000 10.18 3.06 39.49 2.59
326 327 2.087009 GTGCGTGCTCGTGTCTACC 61.087 63.158 10.18 0.00 39.49 3.18
327 328 2.874780 GCGTGCTCGTGTCTACCG 60.875 66.667 10.18 0.00 39.49 4.02
328 329 2.874780 CGTGCTCGTGTCTACCGC 60.875 66.667 0.00 0.00 0.00 5.68
329 330 2.506438 GTGCTCGTGTCTACCGCC 60.506 66.667 0.00 0.00 0.00 6.13
330 331 2.986979 TGCTCGTGTCTACCGCCA 60.987 61.111 0.00 0.00 0.00 5.69
331 332 2.260434 GCTCGTGTCTACCGCCAA 59.740 61.111 0.00 0.00 0.00 4.52
332 333 1.805945 GCTCGTGTCTACCGCCAAG 60.806 63.158 0.00 0.00 0.00 3.61
333 334 1.805945 CTCGTGTCTACCGCCAAGC 60.806 63.158 0.00 0.00 0.00 4.01
334 335 2.048597 CGTGTCTACCGCCAAGCA 60.049 61.111 0.00 0.00 0.00 3.91
335 336 2.380410 CGTGTCTACCGCCAAGCAC 61.380 63.158 0.00 0.00 0.00 4.40
336 337 2.033194 GTGTCTACCGCCAAGCACC 61.033 63.158 0.00 0.00 0.00 5.01
337 338 2.214216 TGTCTACCGCCAAGCACCT 61.214 57.895 0.00 0.00 0.00 4.00
338 339 1.003718 GTCTACCGCCAAGCACCTT 60.004 57.895 0.00 0.00 0.00 3.50
339 340 1.003839 TCTACCGCCAAGCACCTTG 60.004 57.895 0.00 0.00 40.75 3.61
346 347 3.578456 CAAGCACCTTGGCGGTAG 58.422 61.111 0.00 0.00 46.94 3.18
347 348 2.040544 CAAGCACCTTGGCGGTAGG 61.041 63.158 0.00 0.00 46.94 3.18
348 349 3.268103 AAGCACCTTGGCGGTAGGG 62.268 63.158 5.31 0.00 46.94 3.53
349 350 4.029809 GCACCTTGGCGGTAGGGT 62.030 66.667 5.31 0.00 46.94 4.34
350 351 2.754375 CACCTTGGCGGTAGGGTT 59.246 61.111 5.31 0.00 46.94 4.11
351 352 1.674322 CACCTTGGCGGTAGGGTTG 60.674 63.158 5.31 0.00 46.94 3.77
352 353 2.151388 ACCTTGGCGGTAGGGTTGT 61.151 57.895 5.31 0.00 46.73 3.32
353 354 1.674322 CCTTGGCGGTAGGGTTGTG 60.674 63.158 0.00 0.00 0.00 3.33
354 355 2.281900 TTGGCGGTAGGGTTGTGC 60.282 61.111 0.00 0.00 0.00 4.57
355 356 4.690719 TGGCGGTAGGGTTGTGCG 62.691 66.667 0.00 0.00 0.00 5.34
359 360 4.029809 GGTAGGGTTGTGCGGGCT 62.030 66.667 0.00 0.00 0.00 5.19
360 361 2.662070 GGTAGGGTTGTGCGGGCTA 61.662 63.158 0.00 0.00 0.00 3.93
361 362 1.525442 GTAGGGTTGTGCGGGCTAT 59.475 57.895 0.00 0.00 0.00 2.97
362 363 0.532196 GTAGGGTTGTGCGGGCTATC 60.532 60.000 0.00 0.00 0.00 2.08
363 364 0.978667 TAGGGTTGTGCGGGCTATCA 60.979 55.000 0.00 0.00 0.00 2.15
364 365 2.112815 GGGTTGTGCGGGCTATCAC 61.113 63.158 0.00 0.00 0.00 3.06
365 366 2.112815 GGTTGTGCGGGCTATCACC 61.113 63.158 0.00 0.00 32.51 4.02
366 367 1.376683 GTTGTGCGGGCTATCACCA 60.377 57.895 0.00 0.00 32.51 4.17
367 368 1.078497 TTGTGCGGGCTATCACCAG 60.078 57.895 0.00 0.00 32.51 4.00
375 376 2.785868 GCTATCACCAGCCCAGTTG 58.214 57.895 0.00 0.00 35.40 3.16
376 377 0.749454 GCTATCACCAGCCCAGTTGG 60.749 60.000 0.00 0.00 39.83 3.77
385 386 4.077184 CCCAGTTGGCGGTAGCGA 62.077 66.667 20.16 0.00 46.35 4.93
386 387 2.186903 CCAGTTGGCGGTAGCGAT 59.813 61.111 20.16 0.00 46.35 4.58
387 388 2.173669 CCAGTTGGCGGTAGCGATG 61.174 63.158 20.16 7.62 46.35 3.84
388 389 1.447838 CAGTTGGCGGTAGCGATGT 60.448 57.895 20.16 0.00 46.35 3.06
389 390 1.019278 CAGTTGGCGGTAGCGATGTT 61.019 55.000 20.16 0.00 46.35 2.71
390 391 0.321298 AGTTGGCGGTAGCGATGTTT 60.321 50.000 20.16 0.00 46.35 2.83
391 392 0.096454 GTTGGCGGTAGCGATGTTTC 59.904 55.000 20.16 0.00 46.35 2.78
392 393 1.022451 TTGGCGGTAGCGATGTTTCC 61.022 55.000 20.16 8.99 46.35 3.13
393 394 1.153429 GGCGGTAGCGATGTTTCCT 60.153 57.895 20.16 0.00 46.35 3.36
394 395 0.103572 GGCGGTAGCGATGTTTCCTA 59.896 55.000 20.16 0.00 46.35 2.94
395 396 1.206523 GCGGTAGCGATGTTTCCTAC 58.793 55.000 20.16 0.00 0.00 3.18
396 397 1.849097 CGGTAGCGATGTTTCCTACC 58.151 55.000 9.07 6.10 44.82 3.18
397 398 1.849097 GGTAGCGATGTTTCCTACCG 58.151 55.000 0.00 0.00 41.01 4.02
398 399 1.206523 GTAGCGATGTTTCCTACCGC 58.793 55.000 0.00 0.00 45.39 5.68
399 400 0.103572 TAGCGATGTTTCCTACCGCC 59.896 55.000 0.00 0.00 46.09 6.13
400 401 1.448893 GCGATGTTTCCTACCGCCA 60.449 57.895 0.00 0.00 39.97 5.69
401 402 1.022451 GCGATGTTTCCTACCGCCAA 61.022 55.000 0.00 0.00 39.97 4.52
402 403 1.444836 CGATGTTTCCTACCGCCAAA 58.555 50.000 0.00 0.00 0.00 3.28
403 404 1.396996 CGATGTTTCCTACCGCCAAAG 59.603 52.381 0.00 0.00 0.00 2.77
404 405 2.433436 GATGTTTCCTACCGCCAAAGT 58.567 47.619 0.00 0.00 0.00 2.66
405 406 2.351706 TGTTTCCTACCGCCAAAGTT 57.648 45.000 0.00 0.00 0.00 2.66
406 407 2.223745 TGTTTCCTACCGCCAAAGTTC 58.776 47.619 0.00 0.00 0.00 3.01
407 408 1.538512 GTTTCCTACCGCCAAAGTTCC 59.461 52.381 0.00 0.00 0.00 3.62
408 409 1.061546 TTCCTACCGCCAAAGTTCCT 58.938 50.000 0.00 0.00 0.00 3.36
409 410 0.323629 TCCTACCGCCAAAGTTCCTG 59.676 55.000 0.00 0.00 0.00 3.86
410 411 0.676782 CCTACCGCCAAAGTTCCTGG 60.677 60.000 0.00 0.00 36.99 4.45
416 417 2.854522 CCAAAGTTCCTGGCGGTAG 58.145 57.895 0.00 0.00 0.00 3.18
417 418 0.676782 CCAAAGTTCCTGGCGGTAGG 60.677 60.000 0.00 0.00 39.29 3.18
418 419 1.002502 AAAGTTCCTGGCGGTAGGC 60.003 57.895 0.00 0.00 44.11 3.93
419 420 1.489560 AAAGTTCCTGGCGGTAGGCT 61.490 55.000 0.00 0.00 44.18 4.58
420 421 2.125106 GTTCCTGGCGGTAGGCTG 60.125 66.667 0.00 0.00 44.18 4.85
421 422 4.096003 TTCCTGGCGGTAGGCTGC 62.096 66.667 0.00 0.00 45.95 5.25
423 424 3.154473 CCTGGCGGTAGGCTGCTA 61.154 66.667 1.79 0.00 45.94 3.49
424 425 2.419198 CTGGCGGTAGGCTGCTAG 59.581 66.667 1.79 0.00 46.50 3.42
425 426 2.043349 TGGCGGTAGGCTGCTAGA 60.043 61.111 1.79 0.00 45.94 2.43
426 427 2.417936 GGCGGTAGGCTGCTAGAC 59.582 66.667 1.79 0.00 45.94 2.59
427 428 2.417936 GCGGTAGGCTGCTAGACC 59.582 66.667 1.79 3.93 43.44 3.85
428 429 3.130227 CGGTAGGCTGCTAGACCC 58.870 66.667 1.79 0.00 0.00 4.46
429 430 1.455959 CGGTAGGCTGCTAGACCCT 60.456 63.158 1.79 0.00 0.00 4.34
430 431 0.178998 CGGTAGGCTGCTAGACCCTA 60.179 60.000 1.79 0.00 0.00 3.53
431 432 1.548128 CGGTAGGCTGCTAGACCCTAT 60.548 57.143 1.79 0.00 34.05 2.57
432 433 2.172679 GGTAGGCTGCTAGACCCTATC 58.827 57.143 1.79 0.00 34.05 2.08
433 434 1.813786 GTAGGCTGCTAGACCCTATCG 59.186 57.143 0.00 0.00 34.05 2.92
434 435 1.182385 AGGCTGCTAGACCCTATCGC 61.182 60.000 0.00 0.00 0.00 4.58
435 436 1.290639 GCTGCTAGACCCTATCGCC 59.709 63.158 0.00 0.00 0.00 5.54
436 437 1.464376 GCTGCTAGACCCTATCGCCA 61.464 60.000 0.00 0.00 0.00 5.69
437 438 1.261480 CTGCTAGACCCTATCGCCAT 58.739 55.000 0.00 0.00 0.00 4.40
438 439 0.969149 TGCTAGACCCTATCGCCATG 59.031 55.000 0.00 0.00 0.00 3.66
439 440 0.247736 GCTAGACCCTATCGCCATGG 59.752 60.000 7.63 7.63 0.00 3.66
440 441 1.924731 CTAGACCCTATCGCCATGGA 58.075 55.000 18.40 0.00 0.00 3.41
441 442 1.821753 CTAGACCCTATCGCCATGGAG 59.178 57.143 18.40 13.80 0.00 3.86
442 443 0.105453 AGACCCTATCGCCATGGAGT 60.105 55.000 18.40 5.86 0.00 3.85
443 444 0.318762 GACCCTATCGCCATGGAGTC 59.681 60.000 18.40 0.18 0.00 3.36
444 445 0.105453 ACCCTATCGCCATGGAGTCT 60.105 55.000 18.40 7.24 0.00 3.24
445 446 0.319728 CCCTATCGCCATGGAGTCTG 59.680 60.000 18.40 6.66 0.00 3.51
446 447 0.319728 CCTATCGCCATGGAGTCTGG 59.680 60.000 18.40 11.99 36.81 3.86
452 453 3.902515 CCATGGAGTCTGGCGATAG 57.097 57.895 5.56 0.00 0.00 2.08
453 454 1.043816 CCATGGAGTCTGGCGATAGT 58.956 55.000 5.56 0.00 39.35 2.12
454 455 2.239400 CCATGGAGTCTGGCGATAGTA 58.761 52.381 5.56 0.00 39.35 1.82
455 456 2.628178 CCATGGAGTCTGGCGATAGTAA 59.372 50.000 5.56 0.00 39.35 2.24
456 457 3.069586 CCATGGAGTCTGGCGATAGTAAA 59.930 47.826 5.56 0.00 39.35 2.01
457 458 4.442893 CCATGGAGTCTGGCGATAGTAAAA 60.443 45.833 5.56 0.00 39.35 1.52
458 459 4.386867 TGGAGTCTGGCGATAGTAAAAG 57.613 45.455 0.00 0.00 39.35 2.27
459 460 4.021229 TGGAGTCTGGCGATAGTAAAAGA 58.979 43.478 0.00 0.00 39.35 2.52
460 461 4.098044 TGGAGTCTGGCGATAGTAAAAGAG 59.902 45.833 0.00 0.00 39.35 2.85
461 462 4.098196 GGAGTCTGGCGATAGTAAAAGAGT 59.902 45.833 0.00 0.00 39.35 3.24
462 463 5.251601 AGTCTGGCGATAGTAAAAGAGTC 57.748 43.478 0.00 0.00 39.35 3.36
463 464 4.705507 AGTCTGGCGATAGTAAAAGAGTCA 59.294 41.667 0.00 0.00 39.35 3.41
464 465 5.038033 GTCTGGCGATAGTAAAAGAGTCAG 58.962 45.833 0.00 0.00 39.35 3.51
465 466 4.948004 TCTGGCGATAGTAAAAGAGTCAGA 59.052 41.667 0.00 0.00 39.35 3.27
466 467 5.594725 TCTGGCGATAGTAAAAGAGTCAGAT 59.405 40.000 0.00 0.00 39.35 2.90
467 468 5.833082 TGGCGATAGTAAAAGAGTCAGATC 58.167 41.667 0.00 0.00 39.35 2.75
468 469 5.594725 TGGCGATAGTAAAAGAGTCAGATCT 59.405 40.000 0.00 0.00 39.35 2.75
469 470 6.146898 GGCGATAGTAAAAGAGTCAGATCTC 58.853 44.000 0.00 0.00 39.35 2.75
470 471 5.849081 GCGATAGTAAAAGAGTCAGATCTCG 59.151 44.000 0.00 0.00 37.75 4.04
471 472 6.292973 GCGATAGTAAAAGAGTCAGATCTCGA 60.293 42.308 0.00 0.00 37.75 4.04
472 473 7.631822 CGATAGTAAAAGAGTCAGATCTCGAA 58.368 38.462 0.00 0.00 39.21 3.71
473 474 8.286800 CGATAGTAAAAGAGTCAGATCTCGAAT 58.713 37.037 0.00 0.00 39.21 3.34
474 475 9.959749 GATAGTAAAAGAGTCAGATCTCGAATT 57.040 33.333 0.00 0.00 39.21 2.17
477 478 9.495572 AGTAAAAGAGTCAGATCTCGAATTTTT 57.504 29.630 0.00 1.07 39.21 1.94
500 501 8.680039 TTTTTAAACTAGGGTCAAATCTCGAA 57.320 30.769 0.00 0.00 0.00 3.71
501 502 8.857694 TTTTAAACTAGGGTCAAATCTCGAAT 57.142 30.769 0.00 0.00 0.00 3.34
502 503 9.947433 TTTTAAACTAGGGTCAAATCTCGAATA 57.053 29.630 0.00 0.00 0.00 1.75
503 504 9.595823 TTTAAACTAGGGTCAAATCTCGAATAG 57.404 33.333 0.00 0.00 0.00 1.73
504 505 5.793030 ACTAGGGTCAAATCTCGAATAGG 57.207 43.478 0.00 0.00 0.00 2.57
505 506 5.209659 ACTAGGGTCAAATCTCGAATAGGT 58.790 41.667 0.00 0.00 0.00 3.08
506 507 5.661759 ACTAGGGTCAAATCTCGAATAGGTT 59.338 40.000 0.00 0.00 0.00 3.50
507 508 5.437191 AGGGTCAAATCTCGAATAGGTTT 57.563 39.130 0.00 0.00 39.19 3.27
508 509 5.429130 AGGGTCAAATCTCGAATAGGTTTC 58.571 41.667 0.00 0.00 36.33 2.78
509 510 5.045869 AGGGTCAAATCTCGAATAGGTTTCA 60.046 40.000 0.00 0.00 36.33 2.69
510 511 5.294552 GGGTCAAATCTCGAATAGGTTTCAG 59.705 44.000 0.00 0.00 36.33 3.02
511 512 6.106673 GGTCAAATCTCGAATAGGTTTCAGA 58.893 40.000 0.00 0.00 36.33 3.27
512 513 6.594159 GGTCAAATCTCGAATAGGTTTCAGAA 59.406 38.462 0.00 0.00 36.33 3.02
513 514 7.119262 GGTCAAATCTCGAATAGGTTTCAGAAA 59.881 37.037 0.00 0.00 36.33 2.52
514 515 8.504005 GTCAAATCTCGAATAGGTTTCAGAAAA 58.496 33.333 0.00 0.00 36.33 2.29
515 516 8.721478 TCAAATCTCGAATAGGTTTCAGAAAAG 58.279 33.333 0.00 0.00 36.33 2.27
516 517 7.617041 AATCTCGAATAGGTTTCAGAAAAGG 57.383 36.000 0.00 0.00 0.00 3.11
517 518 5.488341 TCTCGAATAGGTTTCAGAAAAGGG 58.512 41.667 0.00 0.00 0.00 3.95
518 519 5.012768 TCTCGAATAGGTTTCAGAAAAGGGT 59.987 40.000 0.00 0.00 0.00 4.34
519 520 5.243207 TCGAATAGGTTTCAGAAAAGGGTC 58.757 41.667 0.00 0.00 0.00 4.46
520 521 5.001232 CGAATAGGTTTCAGAAAAGGGTCA 58.999 41.667 0.00 0.00 0.00 4.02
521 522 5.472137 CGAATAGGTTTCAGAAAAGGGTCAA 59.528 40.000 0.00 0.00 0.00 3.18
522 523 6.016610 CGAATAGGTTTCAGAAAAGGGTCAAA 60.017 38.462 0.00 0.00 0.00 2.69
523 524 7.469456 CGAATAGGTTTCAGAAAAGGGTCAAAA 60.469 37.037 0.00 0.00 0.00 2.44
524 525 5.339008 AGGTTTCAGAAAAGGGTCAAAAC 57.661 39.130 0.00 0.00 0.00 2.43
525 526 4.775253 AGGTTTCAGAAAAGGGTCAAAACA 59.225 37.500 0.00 0.00 31.85 2.83
526 527 4.868171 GGTTTCAGAAAAGGGTCAAAACAC 59.132 41.667 0.00 0.00 31.85 3.32
527 528 4.364415 TTCAGAAAAGGGTCAAAACACG 57.636 40.909 0.00 0.00 32.44 4.49
528 529 3.611970 TCAGAAAAGGGTCAAAACACGA 58.388 40.909 0.00 0.00 32.44 4.35
529 530 4.011023 TCAGAAAAGGGTCAAAACACGAA 58.989 39.130 0.00 0.00 32.44 3.85
530 531 4.459685 TCAGAAAAGGGTCAAAACACGAAA 59.540 37.500 0.00 0.00 32.44 3.46
531 532 5.047943 TCAGAAAAGGGTCAAAACACGAAAA 60.048 36.000 0.00 0.00 32.44 2.29
532 533 5.810074 CAGAAAAGGGTCAAAACACGAAAAT 59.190 36.000 0.00 0.00 32.44 1.82
533 534 6.312672 CAGAAAAGGGTCAAAACACGAAAATT 59.687 34.615 0.00 0.00 32.44 1.82
534 535 6.876789 AGAAAAGGGTCAAAACACGAAAATTT 59.123 30.769 0.00 0.00 32.44 1.82
535 536 6.415798 AAAGGGTCAAAACACGAAAATTTG 57.584 33.333 0.00 0.00 35.81 2.32
536 537 3.868661 AGGGTCAAAACACGAAAATTTGC 59.131 39.130 0.00 0.00 34.77 3.68
537 538 3.001838 GGGTCAAAACACGAAAATTTGCC 59.998 43.478 0.00 1.84 34.77 4.52
538 539 3.302156 GGTCAAAACACGAAAATTTGCCG 60.302 43.478 10.51 10.51 34.77 5.69
539 540 2.282820 TCAAAACACGAAAATTTGCCGC 59.717 40.909 11.63 0.00 34.77 6.53
540 541 1.927895 AAACACGAAAATTTGCCGCA 58.072 40.000 11.63 0.00 0.00 5.69
541 542 1.204792 AACACGAAAATTTGCCGCAC 58.795 45.000 11.63 0.00 0.00 5.34
542 543 0.383949 ACACGAAAATTTGCCGCACT 59.616 45.000 11.63 0.00 0.00 4.40
543 544 0.777631 CACGAAAATTTGCCGCACTG 59.222 50.000 11.63 2.10 0.00 3.66
544 545 0.665835 ACGAAAATTTGCCGCACTGA 59.334 45.000 11.63 0.00 0.00 3.41
545 546 1.269448 ACGAAAATTTGCCGCACTGAT 59.731 42.857 11.63 0.00 0.00 2.90
554 555 0.443869 GCCGCACTGATACAACACAG 59.556 55.000 0.00 0.00 39.65 3.66
556 557 1.147473 CGCACTGATACAACACAGCA 58.853 50.000 0.00 0.00 37.61 4.41
563 564 4.339247 ACTGATACAACACAGCAAAAGCTT 59.661 37.500 0.00 0.00 37.61 3.74
589 590 6.646636 CGAATAAAGAACTTGACTGAAACGT 58.353 36.000 0.00 0.00 0.00 3.99
591 592 4.516092 AAAGAACTTGACTGAAACGTCG 57.484 40.909 0.00 0.00 36.71 5.12
592 593 1.859080 AGAACTTGACTGAAACGTCGC 59.141 47.619 0.00 0.00 36.71 5.19
593 594 1.591158 GAACTTGACTGAAACGTCGCA 59.409 47.619 0.00 0.00 36.71 5.10
633 635 4.488879 CAGGCCTTCATTTAAAGCAGTTC 58.511 43.478 0.00 0.00 0.00 3.01
634 636 4.022068 CAGGCCTTCATTTAAAGCAGTTCA 60.022 41.667 0.00 0.00 0.00 3.18
635 637 4.588528 AGGCCTTCATTTAAAGCAGTTCAA 59.411 37.500 0.00 0.00 0.00 2.69
636 638 5.246883 AGGCCTTCATTTAAAGCAGTTCAAT 59.753 36.000 0.00 0.00 0.00 2.57
637 639 5.934043 GGCCTTCATTTAAAGCAGTTCAATT 59.066 36.000 0.00 0.00 0.00 2.32
638 640 6.128472 GGCCTTCATTTAAAGCAGTTCAATTG 60.128 38.462 0.00 0.00 0.00 2.32
639 641 6.424812 GCCTTCATTTAAAGCAGTTCAATTGT 59.575 34.615 5.13 0.00 0.00 2.71
640 642 7.041848 GCCTTCATTTAAAGCAGTTCAATTGTT 60.042 33.333 5.13 0.00 0.00 2.83
641 643 8.490355 CCTTCATTTAAAGCAGTTCAATTGTTC 58.510 33.333 5.13 0.15 0.00 3.18
734 750 3.031736 GACTGTTCCCTAGTATGGCTCA 58.968 50.000 0.00 0.00 0.00 4.26
750 766 2.033049 GGCTCATCTGACACAATGATGC 59.967 50.000 0.00 4.35 37.91 3.91
832 1110 3.452990 TCACACTCTGTCCCTACAACAAA 59.547 43.478 0.00 0.00 34.49 2.83
833 1111 3.809832 CACACTCTGTCCCTACAACAAAG 59.190 47.826 0.00 0.00 34.49 2.77
834 1112 2.808543 CACTCTGTCCCTACAACAAAGC 59.191 50.000 0.00 0.00 34.49 3.51
835 1113 2.224548 ACTCTGTCCCTACAACAAAGCC 60.225 50.000 0.00 0.00 34.49 4.35
836 1114 1.771854 TCTGTCCCTACAACAAAGCCA 59.228 47.619 0.00 0.00 34.49 4.75
837 1115 2.154462 CTGTCCCTACAACAAAGCCAG 58.846 52.381 0.00 0.00 34.49 4.85
838 1116 1.202879 TGTCCCTACAACAAAGCCAGG 60.203 52.381 0.00 0.00 30.91 4.45
839 1117 1.073284 GTCCCTACAACAAAGCCAGGA 59.927 52.381 0.00 0.00 0.00 3.86
840 1118 1.073284 TCCCTACAACAAAGCCAGGAC 59.927 52.381 0.00 0.00 0.00 3.85
851 1129 2.492090 CCAGGACGGAAGAGCTCG 59.508 66.667 8.37 0.00 36.56 5.03
871 1171 2.162681 GAGCTGGGCACTTGTACAAAT 58.837 47.619 10.03 0.00 0.00 2.32
880 1180 3.671971 GCACTTGTACAAATATGGCGCAA 60.672 43.478 10.83 0.00 0.00 4.85
884 1184 5.355630 ACTTGTACAAATATGGCGCAATGTA 59.644 36.000 10.83 0.00 0.00 2.29
886 1186 6.384258 TGTACAAATATGGCGCAATGTATT 57.616 33.333 10.83 0.00 0.00 1.89
889 1189 6.147864 ACAAATATGGCGCAATGTATTTCT 57.852 33.333 10.83 0.00 0.00 2.52
899 1199 4.500205 CGCAATGTATTTCTCCATGGCATT 60.500 41.667 6.96 6.27 37.79 3.56
901 1201 4.595762 ATGTATTTCTCCATGGCATTGC 57.404 40.909 6.96 0.00 0.00 3.56
937 1269 7.693132 AGCATATATACATTGATTGACCACCT 58.307 34.615 0.00 0.00 0.00 4.00
938 1270 7.609146 AGCATATATACATTGATTGACCACCTG 59.391 37.037 0.00 0.00 0.00 4.00
939 1271 7.148188 GCATATATACATTGATTGACCACCTGG 60.148 40.741 0.00 0.00 42.17 4.45
949 1281 4.308526 CCACCTGGTCACTGCATC 57.691 61.111 0.00 0.00 0.00 3.91
950 1282 1.377725 CCACCTGGTCACTGCATCC 60.378 63.158 0.00 0.00 0.00 3.51
951 1283 1.742880 CACCTGGTCACTGCATCCG 60.743 63.158 0.00 0.00 0.00 4.18
952 1284 2.217038 ACCTGGTCACTGCATCCGT 61.217 57.895 0.00 0.00 0.00 4.69
953 1285 1.448540 CCTGGTCACTGCATCCGTC 60.449 63.158 0.00 0.00 0.00 4.79
954 1286 1.807165 CTGGTCACTGCATCCGTCG 60.807 63.158 0.00 0.00 0.00 5.12
955 1287 3.188786 GGTCACTGCATCCGTCGC 61.189 66.667 0.00 0.00 0.00 5.19
956 1288 2.125912 GTCACTGCATCCGTCGCT 60.126 61.111 0.00 0.00 0.00 4.93
957 1289 1.138883 GTCACTGCATCCGTCGCTA 59.861 57.895 0.00 0.00 0.00 4.26
958 1290 1.138883 TCACTGCATCCGTCGCTAC 59.861 57.895 0.00 0.00 0.00 3.58
959 1291 1.139734 CACTGCATCCGTCGCTACT 59.860 57.895 0.00 0.00 0.00 2.57
960 1292 1.139734 ACTGCATCCGTCGCTACTG 59.860 57.895 0.00 0.00 0.00 2.74
961 1293 1.589993 CTGCATCCGTCGCTACTGG 60.590 63.158 0.00 0.00 0.00 4.00
962 1294 2.004808 CTGCATCCGTCGCTACTGGA 62.005 60.000 4.85 4.85 34.38 3.86
963 1295 1.299468 GCATCCGTCGCTACTGGAG 60.299 63.158 7.70 0.00 33.72 3.86
964 1296 2.005960 GCATCCGTCGCTACTGGAGT 62.006 60.000 7.70 0.00 33.72 3.85
965 1297 1.306148 CATCCGTCGCTACTGGAGTA 58.694 55.000 7.70 0.00 33.72 2.59
966 1298 1.002684 CATCCGTCGCTACTGGAGTAC 60.003 57.143 7.70 0.00 33.72 2.73
967 1299 0.745845 TCCGTCGCTACTGGAGTACC 60.746 60.000 0.00 0.00 0.00 3.34
968 1300 0.747283 CCGTCGCTACTGGAGTACCT 60.747 60.000 0.00 0.00 37.04 3.08
969 1301 1.473965 CCGTCGCTACTGGAGTACCTA 60.474 57.143 0.00 0.00 37.04 3.08
970 1302 2.492012 CGTCGCTACTGGAGTACCTAT 58.508 52.381 0.00 0.00 37.04 2.57
971 1303 2.479656 CGTCGCTACTGGAGTACCTATC 59.520 54.545 0.00 0.00 37.04 2.08
972 1304 3.742385 GTCGCTACTGGAGTACCTATCT 58.258 50.000 0.00 0.00 37.04 1.98
973 1305 4.136051 GTCGCTACTGGAGTACCTATCTT 58.864 47.826 0.00 0.00 37.04 2.40
974 1306 4.023878 GTCGCTACTGGAGTACCTATCTTG 60.024 50.000 0.00 0.00 37.04 3.02
975 1307 4.135306 CGCTACTGGAGTACCTATCTTGA 58.865 47.826 0.00 0.00 37.04 3.02
976 1308 4.214545 CGCTACTGGAGTACCTATCTTGAG 59.785 50.000 0.00 0.00 37.04 3.02
977 1309 4.022676 GCTACTGGAGTACCTATCTTGAGC 60.023 50.000 0.00 0.00 37.04 4.26
978 1310 4.258457 ACTGGAGTACCTATCTTGAGCT 57.742 45.455 0.00 0.00 37.04 4.09
979 1311 3.957497 ACTGGAGTACCTATCTTGAGCTG 59.043 47.826 0.00 0.00 37.04 4.24
980 1312 2.695666 TGGAGTACCTATCTTGAGCTGC 59.304 50.000 0.00 0.00 37.04 5.25
981 1313 2.036604 GGAGTACCTATCTTGAGCTGCC 59.963 54.545 0.00 0.00 0.00 4.85
982 1314 2.962421 GAGTACCTATCTTGAGCTGCCT 59.038 50.000 0.00 0.00 0.00 4.75
983 1315 4.145807 GAGTACCTATCTTGAGCTGCCTA 58.854 47.826 0.00 0.00 0.00 3.93
984 1316 4.148838 AGTACCTATCTTGAGCTGCCTAG 58.851 47.826 0.00 0.00 0.00 3.02
985 1317 3.320610 ACCTATCTTGAGCTGCCTAGA 57.679 47.619 0.00 0.44 0.00 2.43
986 1318 3.230134 ACCTATCTTGAGCTGCCTAGAG 58.770 50.000 0.00 0.00 0.00 2.43
987 1319 2.562298 CCTATCTTGAGCTGCCTAGAGG 59.438 54.545 0.00 0.00 38.53 3.69
988 1320 1.422531 ATCTTGAGCTGCCTAGAGGG 58.577 55.000 0.00 0.00 35.18 4.30
1045 1377 0.179067 CCTCGAGACGCCTAGAGAGT 60.179 60.000 15.71 0.00 42.52 3.24
1051 1383 2.339100 GACGCCTAGAGAGTTCCGGC 62.339 65.000 0.00 0.00 37.17 6.13
1099 1431 4.953868 CGGTCACCGGCGTTGTGA 62.954 66.667 8.94 13.72 44.15 3.58
1119 1451 0.321564 CAAACGGTGGCTCTGGATCA 60.322 55.000 0.00 0.00 0.00 2.92
1131 1463 1.005569 TCTGGATCACCTGAGTACGGT 59.994 52.381 0.00 0.00 38.81 4.83
1253 1591 2.159028 AGAAGAAGAGTGATAAGGCGGC 60.159 50.000 0.00 0.00 0.00 6.53
1300 1638 4.758251 TGCTGGACACGCCGGATG 62.758 66.667 5.05 4.82 46.81 3.51
1387 1725 0.249955 CCATGGGGTCAATTTGTGCC 59.750 55.000 2.85 0.87 0.00 5.01
1513 1860 0.729140 GTGCGAACTTGCCCATTTCG 60.729 55.000 7.71 7.71 43.92 3.46
1515 1862 0.454452 GCGAACTTGCCCATTTCGTC 60.454 55.000 11.67 4.22 43.20 4.20
1566 1913 0.830023 TGCTAACCCCTGGTTTTGCC 60.830 55.000 3.49 0.00 44.33 4.52
1636 1983 1.607467 GCCAAACTGGTGGATGCCT 60.607 57.895 4.02 0.00 41.65 4.75
1640 1987 0.469705 AAACTGGTGGATGCCTTGCA 60.470 50.000 0.00 0.00 44.86 4.08
1730 2083 4.969196 CGGCCGGCAGTGCGATAT 62.969 66.667 30.85 0.00 0.00 1.63
1785 2153 1.068895 AGGATGCTGATCAAGAGCTCG 59.931 52.381 8.37 0.00 37.35 5.03
1949 2317 0.389166 CAGTCTCTTGAGCGTGACCC 60.389 60.000 0.00 0.00 0.00 4.46
1978 2346 2.693591 AGACGAAATCTGGCCGATCTTA 59.306 45.455 9.96 0.00 35.81 2.10
1992 2360 2.444351 GATCTTACAAATGCACGCTGC 58.556 47.619 0.00 3.44 45.29 5.25
2008 2376 2.661979 CGCTGCATCATCATCACAATCG 60.662 50.000 0.00 0.00 0.00 3.34
2045 2413 0.898326 TACCTGCTTCGCTCTCCACA 60.898 55.000 0.00 0.00 0.00 4.17
2124 2492 2.808315 GGCGATCTCCGAGCAGAA 59.192 61.111 0.00 0.00 41.76 3.02
2259 2633 0.953727 TTGTAGCAGCTTGCCTTGTG 59.046 50.000 0.00 0.00 46.52 3.33
2269 3509 2.508526 CTTGCCTTGTGCTCCTTTACT 58.491 47.619 0.00 0.00 42.00 2.24
2291 3531 4.623932 ACTTTCTCCTGTCATGCTTGTA 57.376 40.909 0.00 0.00 0.00 2.41
2321 3561 0.683412 TCTTGAGAAGCTGCAGCAGA 59.317 50.000 38.24 27.25 45.16 4.26
2375 3615 1.967319 TTCAAGTTCAGCTCGGCTTT 58.033 45.000 0.00 0.00 36.40 3.51
2402 3642 5.612725 AATGGAATTGGTGTGTCAGTTTT 57.387 34.783 0.00 0.00 33.44 2.43
2414 3654 4.759693 TGTGTCAGTTTTGGCGAGAATATT 59.240 37.500 0.00 0.00 0.00 1.28
2416 3656 6.128391 TGTGTCAGTTTTGGCGAGAATATTAC 60.128 38.462 0.00 0.00 0.00 1.89
2417 3657 6.092259 GTGTCAGTTTTGGCGAGAATATTACT 59.908 38.462 0.00 0.00 0.00 2.24
2418 3658 6.312918 TGTCAGTTTTGGCGAGAATATTACTC 59.687 38.462 0.00 0.00 0.00 2.59
2419 3659 5.815740 TCAGTTTTGGCGAGAATATTACTCC 59.184 40.000 0.00 3.10 0.00 3.85
2420 3660 5.007724 CAGTTTTGGCGAGAATATTACTCCC 59.992 44.000 0.00 10.03 0.00 4.30
2422 3662 4.602340 TTGGCGAGAATATTACTCCCTC 57.398 45.455 15.19 7.17 0.00 4.30
2423 3663 3.845860 TGGCGAGAATATTACTCCCTCT 58.154 45.455 15.19 0.00 0.00 3.69
2424 3664 4.994282 TGGCGAGAATATTACTCCCTCTA 58.006 43.478 15.19 3.65 0.00 2.43
2426 3666 6.728411 TGGCGAGAATATTACTCCCTCTATA 58.272 40.000 15.19 0.00 0.00 1.31
2427 3667 7.179966 TGGCGAGAATATTACTCCCTCTATAA 58.820 38.462 15.19 0.00 0.00 0.98
2428 3668 7.672660 TGGCGAGAATATTACTCCCTCTATAAA 59.327 37.037 15.19 0.00 0.00 1.40
2429 3669 7.975058 GGCGAGAATATTACTCCCTCTATAAAC 59.025 40.741 0.00 0.00 0.00 2.01
2443 3683 9.750783 TCCCTCTATAAACTAATATAAGAGCGT 57.249 33.333 0.00 0.00 0.00 5.07
2490 3730 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
2492 3732 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
2493 3733 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2494 3734 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2495 3735 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
2496 3736 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
2576 3902 1.792118 CGACCACACGACCAGACAGA 61.792 60.000 0.00 0.00 35.09 3.41
2582 3908 1.007271 ACGACCAGACAGAAGCACG 60.007 57.895 0.00 0.00 0.00 5.34
2605 3931 7.911205 CACGAAACATTTAAGTCAGGTGTTTAA 59.089 33.333 2.23 0.00 41.50 1.52
2645 3971 3.478509 ACACTACAGTCAAGAGTCGTCT 58.521 45.455 0.00 0.00 32.81 4.18
2716 4046 9.811995 ACTATGTTCTATAATTAACAGCGACAA 57.188 29.630 0.00 0.00 38.87 3.18
2756 4086 2.202932 ACGCTAGGCCGCATTCAG 60.203 61.111 0.00 0.00 0.00 3.02
2760 4090 0.462759 GCTAGGCCGCATTCAGAACT 60.463 55.000 0.00 0.00 0.00 3.01
2775 4105 1.134175 AGAACTTTGCCCACAAACACG 59.866 47.619 0.00 0.00 40.84 4.49
2810 4140 2.756760 GCTGGATCAAAAAGATGAGGCA 59.243 45.455 0.00 0.00 37.00 4.75
2814 4144 4.021192 TGGATCAAAAAGATGAGGCAAACC 60.021 41.667 0.00 0.00 37.00 3.27
2919 4249 4.998671 TTTCTCCTGCAATGACACAAAA 57.001 36.364 0.00 0.00 0.00 2.44
3029 4359 1.742268 GGGAAAGCAGATGTTCTCAGC 59.258 52.381 0.00 0.00 36.68 4.26
3038 4368 2.094286 AGATGTTCTCAGCGTCTCTTGG 60.094 50.000 0.00 0.00 34.90 3.61
3047 4377 0.721718 GCGTCTCTTGGGTTTCATCG 59.278 55.000 0.00 0.00 0.00 3.84
3127 4457 1.624312 TGCTGTTATCCGGTAACCACA 59.376 47.619 18.29 14.65 41.64 4.17
3128 4458 2.277084 GCTGTTATCCGGTAACCACAG 58.723 52.381 18.29 16.13 41.64 3.66
3223 4553 8.674263 TGACAAACAAGGAATGCAAAATAAAT 57.326 26.923 0.00 0.00 0.00 1.40
3253 4583 1.807142 GAACTTAGCTTGGCAGTGTCC 59.193 52.381 0.00 0.00 0.00 4.02
3262 4592 3.569194 TTGGCAGTGTCCAAGTAAAGA 57.431 42.857 13.07 0.00 40.92 2.52
3270 4600 5.123186 CAGTGTCCAAGTAAAGACAAACACA 59.877 40.000 0.00 0.00 44.19 3.72
3274 4604 4.095185 TCCAAGTAAAGACAAACACAACCG 59.905 41.667 0.00 0.00 0.00 4.44
3284 4614 4.651585 CACAACCGGTGCAAATGG 57.348 55.556 8.52 0.00 41.36 3.16
3288 4618 0.602562 CAACCGGTGCAAATGGTGAT 59.397 50.000 8.52 0.00 35.79 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.731089 TGGTTCGTGGTATTTCTTTCGT 58.269 40.909 0.00 0.00 0.00 3.85
1 2 4.735662 TTGGTTCGTGGTATTTCTTTCG 57.264 40.909 0.00 0.00 0.00 3.46
2 3 9.072294 CATTATTTGGTTCGTGGTATTTCTTTC 57.928 33.333 0.00 0.00 0.00 2.62
3 4 7.544217 GCATTATTTGGTTCGTGGTATTTCTTT 59.456 33.333 0.00 0.00 0.00 2.52
4 5 7.033185 GCATTATTTGGTTCGTGGTATTTCTT 58.967 34.615 0.00 0.00 0.00 2.52
5 6 6.377146 AGCATTATTTGGTTCGTGGTATTTCT 59.623 34.615 0.00 0.00 29.87 2.52
6 7 6.472163 CAGCATTATTTGGTTCGTGGTATTTC 59.528 38.462 0.00 0.00 32.51 2.17
7 8 6.071616 ACAGCATTATTTGGTTCGTGGTATTT 60.072 34.615 0.00 0.00 32.51 1.40
8 9 5.417580 ACAGCATTATTTGGTTCGTGGTATT 59.582 36.000 0.00 0.00 32.51 1.89
9 10 4.947388 ACAGCATTATTTGGTTCGTGGTAT 59.053 37.500 0.00 0.00 32.51 2.73
10 11 4.328536 ACAGCATTATTTGGTTCGTGGTA 58.671 39.130 0.00 0.00 32.51 3.25
11 12 3.153919 ACAGCATTATTTGGTTCGTGGT 58.846 40.909 0.00 0.00 32.51 4.16
12 13 3.848272 ACAGCATTATTTGGTTCGTGG 57.152 42.857 0.00 0.00 32.51 4.94
13 14 4.786068 CGTTACAGCATTATTTGGTTCGTG 59.214 41.667 0.00 0.00 32.51 4.35
14 15 4.691685 TCGTTACAGCATTATTTGGTTCGT 59.308 37.500 0.00 0.00 32.51 3.85
15 16 5.019498 GTCGTTACAGCATTATTTGGTTCG 58.981 41.667 0.00 0.00 32.51 3.95
16 17 6.178239 AGTCGTTACAGCATTATTTGGTTC 57.822 37.500 0.00 0.00 32.51 3.62
17 18 7.675962 TTAGTCGTTACAGCATTATTTGGTT 57.324 32.000 0.00 0.00 32.51 3.67
18 19 7.389607 ACTTTAGTCGTTACAGCATTATTTGGT 59.610 33.333 0.00 0.00 36.17 3.67
19 20 7.748847 ACTTTAGTCGTTACAGCATTATTTGG 58.251 34.615 0.00 0.00 0.00 3.28
20 21 9.051027 CAACTTTAGTCGTTACAGCATTATTTG 57.949 33.333 0.00 0.00 0.00 2.32
21 22 8.234546 CCAACTTTAGTCGTTACAGCATTATTT 58.765 33.333 0.00 0.00 0.00 1.40
22 23 7.389607 ACCAACTTTAGTCGTTACAGCATTATT 59.610 33.333 0.00 0.00 0.00 1.40
23 24 6.877322 ACCAACTTTAGTCGTTACAGCATTAT 59.123 34.615 0.00 0.00 0.00 1.28
24 25 6.225318 ACCAACTTTAGTCGTTACAGCATTA 58.775 36.000 0.00 0.00 0.00 1.90
25 26 5.061179 ACCAACTTTAGTCGTTACAGCATT 58.939 37.500 0.00 0.00 0.00 3.56
26 27 4.638304 ACCAACTTTAGTCGTTACAGCAT 58.362 39.130 0.00 0.00 0.00 3.79
27 28 4.062677 ACCAACTTTAGTCGTTACAGCA 57.937 40.909 0.00 0.00 0.00 4.41
28 29 4.319261 CCAACCAACTTTAGTCGTTACAGC 60.319 45.833 0.00 0.00 0.00 4.40
29 30 5.051816 TCCAACCAACTTTAGTCGTTACAG 58.948 41.667 0.00 0.00 0.00 2.74
30 31 5.021033 TCCAACCAACTTTAGTCGTTACA 57.979 39.130 0.00 0.00 0.00 2.41
31 32 5.556947 CGTTCCAACCAACTTTAGTCGTTAC 60.557 44.000 0.00 0.00 0.00 2.50
32 33 4.507388 CGTTCCAACCAACTTTAGTCGTTA 59.493 41.667 0.00 0.00 0.00 3.18
33 34 3.310501 CGTTCCAACCAACTTTAGTCGTT 59.689 43.478 0.00 0.00 0.00 3.85
34 35 2.867975 CGTTCCAACCAACTTTAGTCGT 59.132 45.455 0.00 0.00 0.00 4.34
35 36 3.125316 TCGTTCCAACCAACTTTAGTCG 58.875 45.455 0.00 0.00 0.00 4.18
36 37 5.163733 TGTTTCGTTCCAACCAACTTTAGTC 60.164 40.000 0.00 0.00 0.00 2.59
37 38 4.701171 TGTTTCGTTCCAACCAACTTTAGT 59.299 37.500 0.00 0.00 0.00 2.24
38 39 5.032220 GTGTTTCGTTCCAACCAACTTTAG 58.968 41.667 0.00 0.00 0.00 1.85
39 40 4.701171 AGTGTTTCGTTCCAACCAACTTTA 59.299 37.500 0.00 0.00 0.00 1.85
40 41 3.508402 AGTGTTTCGTTCCAACCAACTTT 59.492 39.130 0.00 0.00 0.00 2.66
41 42 3.086282 AGTGTTTCGTTCCAACCAACTT 58.914 40.909 0.00 0.00 0.00 2.66
42 43 2.718563 AGTGTTTCGTTCCAACCAACT 58.281 42.857 0.00 0.00 0.00 3.16
43 44 3.119779 TGAAGTGTTTCGTTCCAACCAAC 60.120 43.478 0.00 0.00 36.04 3.77
44 45 3.082548 TGAAGTGTTTCGTTCCAACCAA 58.917 40.909 0.00 0.00 36.04 3.67
45 46 2.712709 TGAAGTGTTTCGTTCCAACCA 58.287 42.857 0.00 0.00 36.04 3.67
46 47 3.431856 GTTGAAGTGTTTCGTTCCAACC 58.568 45.455 0.00 0.00 36.04 3.77
47 48 3.431856 GGTTGAAGTGTTTCGTTCCAAC 58.568 45.455 0.00 0.00 36.04 3.77
48 49 2.424246 GGGTTGAAGTGTTTCGTTCCAA 59.576 45.455 0.00 0.00 36.04 3.53
49 50 2.018515 GGGTTGAAGTGTTTCGTTCCA 58.981 47.619 0.00 0.00 36.04 3.53
50 51 2.018515 TGGGTTGAAGTGTTTCGTTCC 58.981 47.619 0.00 0.00 36.04 3.62
51 52 3.982576 ATGGGTTGAAGTGTTTCGTTC 57.017 42.857 0.00 0.00 36.04 3.95
52 53 3.445805 ACAATGGGTTGAAGTGTTTCGTT 59.554 39.130 0.00 0.00 38.71 3.85
53 54 3.020984 ACAATGGGTTGAAGTGTTTCGT 58.979 40.909 0.00 0.00 38.71 3.85
54 55 3.708563 ACAATGGGTTGAAGTGTTTCG 57.291 42.857 0.00 0.00 38.71 3.46
55 56 7.275560 GCATATAACAATGGGTTGAAGTGTTTC 59.724 37.037 0.00 0.00 40.73 2.78
56 57 7.096551 GCATATAACAATGGGTTGAAGTGTTT 58.903 34.615 0.00 0.00 40.73 2.83
57 58 6.210385 TGCATATAACAATGGGTTGAAGTGTT 59.790 34.615 0.00 0.00 40.73 3.32
58 59 5.714333 TGCATATAACAATGGGTTGAAGTGT 59.286 36.000 0.00 0.00 40.73 3.55
59 60 6.206395 TGCATATAACAATGGGTTGAAGTG 57.794 37.500 0.00 0.00 40.73 3.16
60 61 6.627953 GCTTGCATATAACAATGGGTTGAAGT 60.628 38.462 0.00 0.00 40.73 3.01
61 62 5.750067 GCTTGCATATAACAATGGGTTGAAG 59.250 40.000 0.00 0.00 40.73 3.02
62 63 5.421693 AGCTTGCATATAACAATGGGTTGAA 59.578 36.000 0.00 0.00 40.73 2.69
63 64 4.955450 AGCTTGCATATAACAATGGGTTGA 59.045 37.500 0.00 0.00 40.73 3.18
64 65 5.045215 CAGCTTGCATATAACAATGGGTTG 58.955 41.667 0.00 0.00 40.73 3.77
65 66 4.441913 GCAGCTTGCATATAACAATGGGTT 60.442 41.667 0.00 0.00 44.26 4.11
66 67 3.068590 GCAGCTTGCATATAACAATGGGT 59.931 43.478 0.00 0.00 44.26 4.51
67 68 3.645884 GCAGCTTGCATATAACAATGGG 58.354 45.455 0.00 0.00 44.26 4.00
80 81 3.112075 TACGCACGAGCAGCTTGC 61.112 61.111 9.87 9.29 45.46 4.01
81 82 1.678269 GAGTACGCACGAGCAGCTTG 61.678 60.000 8.26 8.26 42.27 4.01
82 83 1.444553 GAGTACGCACGAGCAGCTT 60.445 57.895 5.50 0.00 42.27 3.74
83 84 2.142357 TTGAGTACGCACGAGCAGCT 62.142 55.000 5.50 0.00 42.27 4.24
84 85 1.733041 TTGAGTACGCACGAGCAGC 60.733 57.895 5.50 0.00 42.27 5.25
85 86 1.344942 GGTTGAGTACGCACGAGCAG 61.345 60.000 5.50 0.37 42.27 4.24
86 87 1.372499 GGTTGAGTACGCACGAGCA 60.372 57.895 5.50 0.00 42.27 4.26
87 88 1.372499 TGGTTGAGTACGCACGAGC 60.372 57.895 0.00 0.00 37.42 5.03
88 89 0.039437 AGTGGTTGAGTACGCACGAG 60.039 55.000 0.00 0.00 34.84 4.18
89 90 0.318360 CAGTGGTTGAGTACGCACGA 60.318 55.000 0.00 0.00 34.84 4.35
90 91 1.282248 CCAGTGGTTGAGTACGCACG 61.282 60.000 0.00 0.00 34.84 5.34
91 92 1.566018 GCCAGTGGTTGAGTACGCAC 61.566 60.000 11.74 0.00 0.00 5.34
92 93 1.301401 GCCAGTGGTTGAGTACGCA 60.301 57.895 11.74 0.00 0.00 5.24
93 94 0.673644 ATGCCAGTGGTTGAGTACGC 60.674 55.000 11.74 0.00 0.00 4.42
94 95 1.464608 CAATGCCAGTGGTTGAGTACG 59.535 52.381 11.74 0.00 0.00 3.67
95 96 2.778299 TCAATGCCAGTGGTTGAGTAC 58.222 47.619 11.74 0.00 0.00 2.73
96 97 3.719268 ATCAATGCCAGTGGTTGAGTA 57.281 42.857 17.44 0.00 35.56 2.59
97 98 2.592102 ATCAATGCCAGTGGTTGAGT 57.408 45.000 17.44 6.53 35.56 3.41
98 99 2.947652 CCTATCAATGCCAGTGGTTGAG 59.052 50.000 17.44 7.68 35.56 3.02
99 100 2.945440 GCCTATCAATGCCAGTGGTTGA 60.945 50.000 15.45 15.45 36.42 3.18
100 101 1.406539 GCCTATCAATGCCAGTGGTTG 59.593 52.381 11.74 8.60 0.00 3.77
101 102 1.285962 AGCCTATCAATGCCAGTGGTT 59.714 47.619 11.74 0.00 0.00 3.67
102 103 0.921896 AGCCTATCAATGCCAGTGGT 59.078 50.000 11.74 0.00 0.00 4.16
103 104 2.936919 TAGCCTATCAATGCCAGTGG 57.063 50.000 4.20 4.20 0.00 4.00
104 105 5.779529 AATTTAGCCTATCAATGCCAGTG 57.220 39.130 0.00 0.00 0.00 3.66
105 106 5.893255 TGAAATTTAGCCTATCAATGCCAGT 59.107 36.000 0.00 0.00 0.00 4.00
106 107 6.395426 TGAAATTTAGCCTATCAATGCCAG 57.605 37.500 0.00 0.00 0.00 4.85
107 108 6.324512 ACATGAAATTTAGCCTATCAATGCCA 59.675 34.615 0.00 0.00 0.00 4.92
108 109 6.752168 ACATGAAATTTAGCCTATCAATGCC 58.248 36.000 0.00 0.00 0.00 4.40
109 110 8.652810 AAACATGAAATTTAGCCTATCAATGC 57.347 30.769 0.00 0.00 0.00 3.56
112 113 9.638239 GTCAAAACATGAAATTTAGCCTATCAA 57.362 29.630 0.00 0.00 40.50 2.57
113 114 8.250332 GGTCAAAACATGAAATTTAGCCTATCA 58.750 33.333 0.00 0.00 40.50 2.15
114 115 7.706607 GGGTCAAAACATGAAATTTAGCCTATC 59.293 37.037 0.00 0.00 40.50 2.08
115 116 7.400052 AGGGTCAAAACATGAAATTTAGCCTAT 59.600 33.333 0.00 0.00 40.50 2.57
116 117 6.723977 AGGGTCAAAACATGAAATTTAGCCTA 59.276 34.615 0.00 0.00 40.50 3.93
117 118 5.543790 AGGGTCAAAACATGAAATTTAGCCT 59.456 36.000 0.00 4.55 40.50 4.58
118 119 5.793817 AGGGTCAAAACATGAAATTTAGCC 58.206 37.500 0.00 2.28 40.50 3.93
119 120 7.728847 AAAGGGTCAAAACATGAAATTTAGC 57.271 32.000 0.00 0.00 40.50 3.09
120 121 9.546428 AGAAAAGGGTCAAAACATGAAATTTAG 57.454 29.630 0.00 0.00 40.50 1.85
122 123 9.898152 TTAGAAAAGGGTCAAAACATGAAATTT 57.102 25.926 0.00 0.00 40.50 1.82
123 124 9.898152 TTTAGAAAAGGGTCAAAACATGAAATT 57.102 25.926 0.00 0.00 40.50 1.82
124 125 9.898152 TTTTAGAAAAGGGTCAAAACATGAAAT 57.102 25.926 0.00 0.00 40.50 2.17
125 126 9.157104 GTTTTAGAAAAGGGTCAAAACATGAAA 57.843 29.630 0.00 0.00 40.50 2.69
126 127 7.766738 GGTTTTAGAAAAGGGTCAAAACATGAA 59.233 33.333 0.00 0.00 40.50 2.57
127 128 7.125053 AGGTTTTAGAAAAGGGTCAAAACATGA 59.875 33.333 0.00 0.00 39.62 3.07
128 129 7.272244 AGGTTTTAGAAAAGGGTCAAAACATG 58.728 34.615 9.60 0.00 39.62 3.21
129 130 7.432148 AGGTTTTAGAAAAGGGTCAAAACAT 57.568 32.000 9.60 1.15 39.62 2.71
130 131 6.860790 AGGTTTTAGAAAAGGGTCAAAACA 57.139 33.333 9.60 0.00 39.62 2.83
131 132 9.472361 GAATAGGTTTTAGAAAAGGGTCAAAAC 57.528 33.333 0.00 0.00 38.01 2.43
132 133 8.354426 CGAATAGGTTTTAGAAAAGGGTCAAAA 58.646 33.333 0.00 0.00 0.00 2.44
133 134 7.720515 TCGAATAGGTTTTAGAAAAGGGTCAAA 59.279 33.333 0.00 0.00 0.00 2.69
134 135 7.225725 TCGAATAGGTTTTAGAAAAGGGTCAA 58.774 34.615 0.00 0.00 0.00 3.18
135 136 6.771573 TCGAATAGGTTTTAGAAAAGGGTCA 58.228 36.000 0.00 0.00 0.00 4.02
136 137 7.101700 TCTCGAATAGGTTTTAGAAAAGGGTC 58.898 38.462 0.00 0.00 0.00 4.46
137 138 7.012661 TCTCGAATAGGTTTTAGAAAAGGGT 57.987 36.000 0.00 0.00 0.00 4.34
138 139 8.507524 AATCTCGAATAGGTTTTAGAAAAGGG 57.492 34.615 0.00 0.00 0.00 3.95
139 140 9.774742 CAAATCTCGAATAGGTTTTAGAAAAGG 57.225 33.333 0.00 0.00 36.33 3.11
143 144 9.326413 GGATCAAATCTCGAATAGGTTTTAGAA 57.674 33.333 0.00 0.00 36.33 2.10
144 145 8.705594 AGGATCAAATCTCGAATAGGTTTTAGA 58.294 33.333 0.00 0.00 36.33 2.10
145 146 8.894768 AGGATCAAATCTCGAATAGGTTTTAG 57.105 34.615 0.00 0.00 36.33 1.85
147 148 9.853177 ATTAGGATCAAATCTCGAATAGGTTTT 57.147 29.630 0.00 0.00 36.33 2.43
148 149 9.853177 AATTAGGATCAAATCTCGAATAGGTTT 57.147 29.630 0.00 0.00 39.19 3.27
149 150 9.853177 AAATTAGGATCAAATCTCGAATAGGTT 57.147 29.630 0.00 0.00 0.00 3.50
150 151 9.277783 CAAATTAGGATCAAATCTCGAATAGGT 57.722 33.333 0.00 0.00 0.00 3.08
151 152 9.494271 TCAAATTAGGATCAAATCTCGAATAGG 57.506 33.333 0.00 0.00 0.00 2.57
180 181 6.376581 AGCAAAAGGATCAGATCTCGATTTTT 59.623 34.615 10.36 7.15 0.00 1.94
181 182 5.884792 AGCAAAAGGATCAGATCTCGATTTT 59.115 36.000 10.36 9.44 0.00 1.82
182 183 5.435291 AGCAAAAGGATCAGATCTCGATTT 58.565 37.500 10.36 4.48 0.00 2.17
183 184 5.033589 AGCAAAAGGATCAGATCTCGATT 57.966 39.130 10.36 0.00 0.00 3.34
184 185 4.686191 AGCAAAAGGATCAGATCTCGAT 57.314 40.909 10.36 0.00 0.00 3.59
185 186 4.202161 GGTAGCAAAAGGATCAGATCTCGA 60.202 45.833 10.36 0.00 0.00 4.04
186 187 4.054671 GGTAGCAAAAGGATCAGATCTCG 58.945 47.826 10.36 0.00 0.00 4.04
187 188 4.054671 CGGTAGCAAAAGGATCAGATCTC 58.945 47.826 10.36 1.00 0.00 2.75
188 189 3.452627 ACGGTAGCAAAAGGATCAGATCT 59.547 43.478 10.36 0.00 0.00 2.75
189 190 3.798202 ACGGTAGCAAAAGGATCAGATC 58.202 45.455 1.18 1.18 0.00 2.75
190 191 3.197766 TGACGGTAGCAAAAGGATCAGAT 59.802 43.478 0.00 0.00 0.00 2.90
191 192 2.565391 TGACGGTAGCAAAAGGATCAGA 59.435 45.455 0.00 0.00 0.00 3.27
192 193 2.932614 CTGACGGTAGCAAAAGGATCAG 59.067 50.000 0.00 0.00 0.00 2.90
193 194 2.354704 CCTGACGGTAGCAAAAGGATCA 60.355 50.000 0.00 0.00 0.00 2.92
194 195 2.280628 CCTGACGGTAGCAAAAGGATC 58.719 52.381 0.00 0.00 0.00 3.36
195 196 1.065418 CCCTGACGGTAGCAAAAGGAT 60.065 52.381 5.57 0.00 0.00 3.24
196 197 0.323629 CCCTGACGGTAGCAAAAGGA 59.676 55.000 5.57 0.00 0.00 3.36
197 198 0.323629 TCCCTGACGGTAGCAAAAGG 59.676 55.000 0.00 0.00 0.00 3.11
198 199 2.280628 GATCCCTGACGGTAGCAAAAG 58.719 52.381 0.00 0.00 0.00 2.27
199 200 1.626321 TGATCCCTGACGGTAGCAAAA 59.374 47.619 0.00 0.00 0.00 2.44
200 201 1.271856 TGATCCCTGACGGTAGCAAA 58.728 50.000 0.00 0.00 0.00 3.68
201 202 1.138859 CATGATCCCTGACGGTAGCAA 59.861 52.381 0.00 0.00 0.00 3.91
202 203 0.752658 CATGATCCCTGACGGTAGCA 59.247 55.000 0.00 0.00 0.00 3.49
203 204 1.040646 TCATGATCCCTGACGGTAGC 58.959 55.000 0.00 0.00 0.00 3.58
204 205 2.802787 GTCATGATCCCTGACGGTAG 57.197 55.000 0.00 0.00 34.24 3.18
209 210 1.341531 CCTACCGTCATGATCCCTGAC 59.658 57.143 13.06 13.06 39.69 3.51
210 211 1.704641 CCTACCGTCATGATCCCTGA 58.295 55.000 0.00 0.00 0.00 3.86
211 212 0.681733 CCCTACCGTCATGATCCCTG 59.318 60.000 0.00 0.00 0.00 4.45
212 213 0.264955 ACCCTACCGTCATGATCCCT 59.735 55.000 0.00 0.00 0.00 4.20
213 214 2.005370 TACCCTACCGTCATGATCCC 57.995 55.000 0.00 0.00 0.00 3.85
214 215 4.525487 TGTTATACCCTACCGTCATGATCC 59.475 45.833 0.00 0.00 0.00 3.36
215 216 5.710984 CTGTTATACCCTACCGTCATGATC 58.289 45.833 0.00 0.00 0.00 2.92
216 217 4.021368 GCTGTTATACCCTACCGTCATGAT 60.021 45.833 0.00 0.00 0.00 2.45
217 218 3.319972 GCTGTTATACCCTACCGTCATGA 59.680 47.826 0.00 0.00 0.00 3.07
218 219 3.554337 GGCTGTTATACCCTACCGTCATG 60.554 52.174 0.00 0.00 0.00 3.07
219 220 2.631545 GGCTGTTATACCCTACCGTCAT 59.368 50.000 0.00 0.00 0.00 3.06
220 221 2.034124 GGCTGTTATACCCTACCGTCA 58.966 52.381 0.00 0.00 0.00 4.35
221 222 2.314246 AGGCTGTTATACCCTACCGTC 58.686 52.381 0.00 0.00 0.00 4.79
222 223 2.466547 AGGCTGTTATACCCTACCGT 57.533 50.000 0.00 0.00 0.00 4.83
223 224 3.930634 GTAGGCTGTTATACCCTACCG 57.069 52.381 0.00 0.00 43.31 4.02
225 226 2.029560 GCGGTAGGCTGTTATACCCTAC 60.030 54.545 0.00 7.39 46.60 3.18
226 227 2.242043 GCGGTAGGCTGTTATACCCTA 58.758 52.381 0.00 0.00 38.60 3.53
227 228 1.046204 GCGGTAGGCTGTTATACCCT 58.954 55.000 0.00 0.00 38.60 4.34
228 229 0.034476 GGCGGTAGGCTGTTATACCC 59.966 60.000 0.00 0.00 42.94 3.69
229 230 0.754472 TGGCGGTAGGCTGTTATACC 59.246 55.000 0.00 0.00 44.18 2.73
230 231 2.480845 CTTGGCGGTAGGCTGTTATAC 58.519 52.381 0.00 0.00 44.18 1.47
231 232 1.414919 CCTTGGCGGTAGGCTGTTATA 59.585 52.381 0.00 0.00 44.18 0.98
232 233 0.180406 CCTTGGCGGTAGGCTGTTAT 59.820 55.000 0.00 0.00 44.18 1.89
233 234 1.196104 ACCTTGGCGGTAGGCTGTTA 61.196 55.000 0.00 0.00 46.73 2.41
234 235 2.351276 CCTTGGCGGTAGGCTGTT 59.649 61.111 0.00 0.00 44.18 3.16
235 236 2.928396 ACCTTGGCGGTAGGCTGT 60.928 61.111 0.00 0.00 46.73 4.40
246 247 3.006728 TACCGCCAGGGACCTTGG 61.007 66.667 18.34 18.34 43.47 3.61
247 248 2.584608 CTACCGCCAGGGACCTTG 59.415 66.667 0.00 0.00 43.47 3.61
248 249 2.687566 CCTACCGCCAGGGACCTT 60.688 66.667 0.00 0.00 43.47 3.50
254 255 3.344137 ATGCAACCCTACCGCCAGG 62.344 63.158 0.00 0.00 45.13 4.45
255 256 2.114670 CATGCAACCCTACCGCCAG 61.115 63.158 0.00 0.00 0.00 4.85
256 257 2.045438 CATGCAACCCTACCGCCA 60.045 61.111 0.00 0.00 0.00 5.69
257 258 3.518068 GCATGCAACCCTACCGCC 61.518 66.667 14.21 0.00 0.00 6.13
258 259 2.602746 TAGGCATGCAACCCTACCGC 62.603 60.000 21.36 0.00 32.65 5.68
259 260 0.814010 GTAGGCATGCAACCCTACCG 60.814 60.000 24.94 0.00 45.01 4.02
260 261 3.095922 GTAGGCATGCAACCCTACC 57.904 57.895 24.94 13.49 45.01 3.18
262 263 1.766496 GGTAGTAGGCATGCAACCCTA 59.234 52.381 21.36 8.68 32.65 3.53
263 264 0.546598 GGTAGTAGGCATGCAACCCT 59.453 55.000 21.36 9.77 35.22 4.34
264 265 0.254747 TGGTAGTAGGCATGCAACCC 59.745 55.000 21.36 13.95 0.00 4.11
265 266 2.122783 TTGGTAGTAGGCATGCAACC 57.877 50.000 21.36 17.28 0.00 3.77
266 267 4.234574 GTTTTTGGTAGTAGGCATGCAAC 58.765 43.478 21.36 16.65 0.00 4.17
267 268 3.257127 GGTTTTTGGTAGTAGGCATGCAA 59.743 43.478 21.36 3.60 0.00 4.08
268 269 2.823154 GGTTTTTGGTAGTAGGCATGCA 59.177 45.455 21.36 0.00 0.00 3.96
269 270 3.089284 AGGTTTTTGGTAGTAGGCATGC 58.911 45.455 9.90 9.90 0.00 4.06
270 271 5.722021 AAAGGTTTTTGGTAGTAGGCATG 57.278 39.130 0.00 0.00 0.00 4.06
271 272 7.507956 ACTTAAAAGGTTTTTGGTAGTAGGCAT 59.492 33.333 0.00 0.00 0.00 4.40
272 273 6.834969 ACTTAAAAGGTTTTTGGTAGTAGGCA 59.165 34.615 0.00 0.00 0.00 4.75
273 274 7.281040 ACTTAAAAGGTTTTTGGTAGTAGGC 57.719 36.000 0.00 0.00 0.00 3.93
280 281 9.373603 GTGTTCAATACTTAAAAGGTTTTTGGT 57.626 29.630 0.00 0.00 0.00 3.67
281 282 9.594478 AGTGTTCAATACTTAAAAGGTTTTTGG 57.406 29.630 0.00 0.00 0.00 3.28
284 285 9.581099 CACAGTGTTCAATACTTAAAAGGTTTT 57.419 29.630 0.00 0.00 0.00 2.43
285 286 7.704899 GCACAGTGTTCAATACTTAAAAGGTTT 59.295 33.333 1.61 0.00 0.00 3.27
286 287 7.200455 GCACAGTGTTCAATACTTAAAAGGTT 58.800 34.615 1.61 0.00 0.00 3.50
287 288 6.512741 CGCACAGTGTTCAATACTTAAAAGGT 60.513 38.462 1.61 0.00 0.00 3.50
288 289 5.851177 CGCACAGTGTTCAATACTTAAAAGG 59.149 40.000 1.61 0.00 0.00 3.11
289 290 6.356977 CACGCACAGTGTTCAATACTTAAAAG 59.643 38.462 1.61 0.00 45.51 2.27
290 291 6.195868 CACGCACAGTGTTCAATACTTAAAA 58.804 36.000 1.61 0.00 45.51 1.52
291 292 5.743467 CACGCACAGTGTTCAATACTTAAA 58.257 37.500 1.61 0.00 45.51 1.52
292 293 5.337219 CACGCACAGTGTTCAATACTTAA 57.663 39.130 1.61 0.00 45.51 1.85
293 294 4.983215 CACGCACAGTGTTCAATACTTA 57.017 40.909 1.61 0.00 45.51 2.24
294 295 3.878086 CACGCACAGTGTTCAATACTT 57.122 42.857 1.61 0.00 45.51 2.24
305 306 1.792118 TAGACACGAGCACGCACAGT 61.792 55.000 2.62 0.00 43.96 3.55
306 307 1.081442 TAGACACGAGCACGCACAG 60.081 57.895 2.62 0.00 43.96 3.66
307 308 1.371267 GTAGACACGAGCACGCACA 60.371 57.895 2.62 0.00 43.96 4.57
308 309 2.087009 GGTAGACACGAGCACGCAC 61.087 63.158 2.62 0.00 43.96 5.34
309 310 2.257371 GGTAGACACGAGCACGCA 59.743 61.111 2.62 0.00 43.96 5.24
310 311 2.874780 CGGTAGACACGAGCACGC 60.875 66.667 2.62 0.00 43.96 5.34
311 312 2.874780 GCGGTAGACACGAGCACG 60.875 66.667 0.76 0.76 45.75 5.34
312 313 2.506438 GGCGGTAGACACGAGCAC 60.506 66.667 0.00 0.00 32.61 4.40
313 314 2.486636 CTTGGCGGTAGACACGAGCA 62.487 60.000 0.00 0.00 33.22 4.26
314 315 1.805945 CTTGGCGGTAGACACGAGC 60.806 63.158 0.00 0.00 33.22 5.03
315 316 1.805945 GCTTGGCGGTAGACACGAG 60.806 63.158 0.00 0.00 33.22 4.18
316 317 2.260434 GCTTGGCGGTAGACACGA 59.740 61.111 0.00 0.00 33.22 4.35
317 318 2.048597 TGCTTGGCGGTAGACACG 60.049 61.111 0.00 0.00 33.22 4.49
318 319 2.033194 GGTGCTTGGCGGTAGACAC 61.033 63.158 0.00 0.00 33.22 3.67
319 320 1.764571 AAGGTGCTTGGCGGTAGACA 61.765 55.000 0.00 0.00 0.00 3.41
320 321 1.003718 AAGGTGCTTGGCGGTAGAC 60.004 57.895 0.00 0.00 0.00 2.59
321 322 1.003839 CAAGGTGCTTGGCGGTAGA 60.004 57.895 0.00 0.00 37.77 2.59
322 323 3.578456 CAAGGTGCTTGGCGGTAG 58.422 61.111 0.00 0.00 37.77 3.18
336 337 2.332654 GCACAACCCTACCGCCAAG 61.333 63.158 0.00 0.00 0.00 3.61
337 338 2.281900 GCACAACCCTACCGCCAA 60.282 61.111 0.00 0.00 0.00 4.52
338 339 4.690719 CGCACAACCCTACCGCCA 62.691 66.667 0.00 0.00 0.00 5.69
342 343 1.979619 ATAGCCCGCACAACCCTACC 61.980 60.000 0.00 0.00 0.00 3.18
343 344 0.532196 GATAGCCCGCACAACCCTAC 60.532 60.000 0.00 0.00 0.00 3.18
344 345 0.978667 TGATAGCCCGCACAACCCTA 60.979 55.000 0.00 0.00 0.00 3.53
345 346 2.297895 TGATAGCCCGCACAACCCT 61.298 57.895 0.00 0.00 0.00 4.34
346 347 2.112815 GTGATAGCCCGCACAACCC 61.113 63.158 0.00 0.00 35.19 4.11
347 348 2.112815 GGTGATAGCCCGCACAACC 61.113 63.158 0.00 0.00 36.76 3.77
348 349 1.369091 CTGGTGATAGCCCGCACAAC 61.369 60.000 0.00 0.00 36.76 3.32
349 350 1.078497 CTGGTGATAGCCCGCACAA 60.078 57.895 0.00 0.00 36.76 3.33
350 351 2.584064 CTGGTGATAGCCCGCACA 59.416 61.111 0.00 0.00 36.76 4.57
351 352 2.897350 GCTGGTGATAGCCCGCAC 60.897 66.667 0.00 0.00 38.41 5.34
357 358 0.749454 CCAACTGGGCTGGTGATAGC 60.749 60.000 0.00 0.00 42.94 2.97
358 359 3.483954 CCAACTGGGCTGGTGATAG 57.516 57.895 0.00 0.00 0.00 2.08
368 369 3.385749 ATCGCTACCGCCAACTGGG 62.386 63.158 0.00 0.00 40.85 4.45
369 370 2.173669 CATCGCTACCGCCAACTGG 61.174 63.158 0.00 0.00 38.53 4.00
370 371 1.019278 AACATCGCTACCGCCAACTG 61.019 55.000 0.00 0.00 0.00 3.16
371 372 0.321298 AAACATCGCTACCGCCAACT 60.321 50.000 0.00 0.00 0.00 3.16
372 373 0.096454 GAAACATCGCTACCGCCAAC 59.904 55.000 0.00 0.00 0.00 3.77
373 374 1.022451 GGAAACATCGCTACCGCCAA 61.022 55.000 0.00 0.00 0.00 4.52
374 375 1.448893 GGAAACATCGCTACCGCCA 60.449 57.895 0.00 0.00 0.00 5.69
375 376 0.103572 TAGGAAACATCGCTACCGCC 59.896 55.000 0.00 0.00 0.00 6.13
376 377 1.206523 GTAGGAAACATCGCTACCGC 58.793 55.000 0.00 0.00 0.00 5.68
377 378 1.849097 GGTAGGAAACATCGCTACCG 58.151 55.000 0.00 0.00 32.05 4.02
378 379 1.849097 CGGTAGGAAACATCGCTACC 58.151 55.000 0.00 0.00 37.32 3.18
379 380 1.206523 GCGGTAGGAAACATCGCTAC 58.793 55.000 0.00 0.00 40.36 3.58
380 381 0.103572 GGCGGTAGGAAACATCGCTA 59.896 55.000 0.00 0.00 42.13 4.26
381 382 1.153429 GGCGGTAGGAAACATCGCT 60.153 57.895 0.00 0.00 42.13 4.93
382 383 1.022451 TTGGCGGTAGGAAACATCGC 61.022 55.000 0.00 0.00 41.89 4.58
383 384 1.396996 CTTTGGCGGTAGGAAACATCG 59.603 52.381 0.00 0.00 0.00 3.84
384 385 2.433436 ACTTTGGCGGTAGGAAACATC 58.567 47.619 0.00 0.00 0.00 3.06
385 386 2.579410 ACTTTGGCGGTAGGAAACAT 57.421 45.000 0.00 0.00 0.00 2.71
386 387 2.223745 GAACTTTGGCGGTAGGAAACA 58.776 47.619 0.00 0.00 0.00 2.83
387 388 1.538512 GGAACTTTGGCGGTAGGAAAC 59.461 52.381 0.00 0.00 0.00 2.78
388 389 1.422402 AGGAACTTTGGCGGTAGGAAA 59.578 47.619 0.00 0.00 27.25 3.13
389 390 1.061546 AGGAACTTTGGCGGTAGGAA 58.938 50.000 0.00 0.00 27.25 3.36
390 391 0.323629 CAGGAACTTTGGCGGTAGGA 59.676 55.000 0.00 0.00 34.60 2.94
391 392 0.676782 CCAGGAACTTTGGCGGTAGG 60.677 60.000 0.00 0.00 34.60 3.18
392 393 2.854522 CCAGGAACTTTGGCGGTAG 58.145 57.895 0.00 0.00 34.60 3.18
398 399 0.676782 CCTACCGCCAGGAACTTTGG 60.677 60.000 0.00 0.00 41.02 3.28
399 400 1.305930 GCCTACCGCCAGGAACTTTG 61.306 60.000 4.81 0.00 41.02 2.77
400 401 1.002502 GCCTACCGCCAGGAACTTT 60.003 57.895 4.81 0.00 41.02 2.66
401 402 1.918800 AGCCTACCGCCAGGAACTT 60.919 57.895 4.81 0.00 41.02 2.66
402 403 2.284699 AGCCTACCGCCAGGAACT 60.285 61.111 4.81 0.00 41.02 3.01
403 404 2.125106 CAGCCTACCGCCAGGAAC 60.125 66.667 4.81 0.00 41.02 3.62
404 405 4.096003 GCAGCCTACCGCCAGGAA 62.096 66.667 4.81 0.00 41.02 3.36
405 406 3.672338 TAGCAGCCTACCGCCAGGA 62.672 63.158 4.81 0.00 41.02 3.86
406 407 3.154473 TAGCAGCCTACCGCCAGG 61.154 66.667 0.00 0.00 45.13 4.45
407 408 2.127869 TCTAGCAGCCTACCGCCAG 61.128 63.158 0.00 0.00 38.78 4.85
408 409 2.043349 TCTAGCAGCCTACCGCCA 60.043 61.111 0.00 0.00 38.78 5.69
409 410 2.417936 GTCTAGCAGCCTACCGCC 59.582 66.667 0.00 0.00 38.78 6.13
410 411 2.417936 GGTCTAGCAGCCTACCGC 59.582 66.667 0.00 0.00 37.98 5.68
411 412 3.130227 GGGTCTAGCAGCCTACCG 58.870 66.667 0.00 0.00 39.90 4.02
416 417 1.290639 GCGATAGGGTCTAGCAGCC 59.709 63.158 0.00 3.13 43.93 4.85
417 418 1.290639 GGCGATAGGGTCTAGCAGC 59.709 63.158 0.00 0.00 0.00 5.25
418 419 1.067283 CATGGCGATAGGGTCTAGCAG 60.067 57.143 0.00 0.00 0.00 4.24
419 420 0.969149 CATGGCGATAGGGTCTAGCA 59.031 55.000 0.00 0.00 0.00 3.49
420 421 0.247736 CCATGGCGATAGGGTCTAGC 59.752 60.000 0.00 0.00 0.00 3.42
421 422 1.821753 CTCCATGGCGATAGGGTCTAG 59.178 57.143 6.96 0.00 0.00 2.43
422 423 1.147191 ACTCCATGGCGATAGGGTCTA 59.853 52.381 9.17 0.00 0.00 2.59
423 424 0.105453 ACTCCATGGCGATAGGGTCT 60.105 55.000 9.17 0.00 0.00 3.85
424 425 0.318762 GACTCCATGGCGATAGGGTC 59.681 60.000 9.17 0.00 0.00 4.46
425 426 0.105453 AGACTCCATGGCGATAGGGT 60.105 55.000 9.17 0.00 0.00 4.34
426 427 0.319728 CAGACTCCATGGCGATAGGG 59.680 60.000 9.17 0.00 0.00 3.53
427 428 0.319728 CCAGACTCCATGGCGATAGG 59.680 60.000 9.17 3.33 0.00 2.57
428 429 3.902515 CCAGACTCCATGGCGATAG 57.097 57.895 9.17 2.32 0.00 2.08
434 435 1.043816 ACTATCGCCAGACTCCATGG 58.956 55.000 4.97 4.97 41.04 3.66
435 436 4.322080 TTTACTATCGCCAGACTCCATG 57.678 45.455 0.00 0.00 0.00 3.66
436 437 4.649674 TCTTTTACTATCGCCAGACTCCAT 59.350 41.667 0.00 0.00 0.00 3.41
437 438 4.021229 TCTTTTACTATCGCCAGACTCCA 58.979 43.478 0.00 0.00 0.00 3.86
438 439 4.098196 ACTCTTTTACTATCGCCAGACTCC 59.902 45.833 0.00 0.00 0.00 3.85
439 440 5.163642 TGACTCTTTTACTATCGCCAGACTC 60.164 44.000 0.00 0.00 0.00 3.36
440 441 4.705507 TGACTCTTTTACTATCGCCAGACT 59.294 41.667 0.00 0.00 0.00 3.24
441 442 4.995124 TGACTCTTTTACTATCGCCAGAC 58.005 43.478 0.00 0.00 0.00 3.51
442 443 4.948004 TCTGACTCTTTTACTATCGCCAGA 59.052 41.667 0.00 0.00 0.00 3.86
443 444 5.250235 TCTGACTCTTTTACTATCGCCAG 57.750 43.478 0.00 0.00 0.00 4.85
444 445 5.594725 AGATCTGACTCTTTTACTATCGCCA 59.405 40.000 0.00 0.00 0.00 5.69
445 446 6.079424 AGATCTGACTCTTTTACTATCGCC 57.921 41.667 0.00 0.00 0.00 5.54
446 447 5.849081 CGAGATCTGACTCTTTTACTATCGC 59.151 44.000 0.00 0.00 35.06 4.58
447 448 7.179927 TCGAGATCTGACTCTTTTACTATCG 57.820 40.000 0.00 0.00 35.06 2.92
448 449 9.959749 AATTCGAGATCTGACTCTTTTACTATC 57.040 33.333 0.00 0.00 35.06 2.08
451 452 9.495572 AAAAATTCGAGATCTGACTCTTTTACT 57.504 29.630 0.00 0.00 35.06 2.24
475 476 8.680039 TTCGAGATTTGACCCTAGTTTAAAAA 57.320 30.769 0.00 0.00 0.00 1.94
476 477 8.857694 ATTCGAGATTTGACCCTAGTTTAAAA 57.142 30.769 0.00 0.00 0.00 1.52
477 478 9.595823 CTATTCGAGATTTGACCCTAGTTTAAA 57.404 33.333 0.00 0.00 0.00 1.52
478 479 8.202137 CCTATTCGAGATTTGACCCTAGTTTAA 58.798 37.037 0.00 0.00 0.00 1.52
479 480 7.343833 ACCTATTCGAGATTTGACCCTAGTTTA 59.656 37.037 0.00 0.00 0.00 2.01
480 481 6.156429 ACCTATTCGAGATTTGACCCTAGTTT 59.844 38.462 0.00 0.00 0.00 2.66
481 482 5.661759 ACCTATTCGAGATTTGACCCTAGTT 59.338 40.000 0.00 0.00 0.00 2.24
482 483 5.209659 ACCTATTCGAGATTTGACCCTAGT 58.790 41.667 0.00 0.00 0.00 2.57
483 484 5.793030 ACCTATTCGAGATTTGACCCTAG 57.207 43.478 0.00 0.00 0.00 3.02
484 485 6.155565 TGAAACCTATTCGAGATTTGACCCTA 59.844 38.462 0.00 0.00 0.00 3.53
485 486 5.045869 TGAAACCTATTCGAGATTTGACCCT 60.046 40.000 0.00 0.00 0.00 4.34
486 487 5.183228 TGAAACCTATTCGAGATTTGACCC 58.817 41.667 0.00 0.00 0.00 4.46
487 488 6.106673 TCTGAAACCTATTCGAGATTTGACC 58.893 40.000 0.00 0.00 0.00 4.02
488 489 7.596749 TTCTGAAACCTATTCGAGATTTGAC 57.403 36.000 0.00 0.00 0.00 3.18
489 490 8.615878 TTTTCTGAAACCTATTCGAGATTTGA 57.384 30.769 1.58 0.00 0.00 2.69
490 491 7.965107 CCTTTTCTGAAACCTATTCGAGATTTG 59.035 37.037 1.58 0.00 0.00 2.32
491 492 7.121315 CCCTTTTCTGAAACCTATTCGAGATTT 59.879 37.037 1.58 0.00 0.00 2.17
492 493 6.599638 CCCTTTTCTGAAACCTATTCGAGATT 59.400 38.462 1.58 0.00 0.00 2.40
493 494 6.116126 CCCTTTTCTGAAACCTATTCGAGAT 58.884 40.000 1.58 0.00 0.00 2.75
494 495 5.012768 ACCCTTTTCTGAAACCTATTCGAGA 59.987 40.000 1.58 0.00 0.00 4.04
495 496 5.246307 ACCCTTTTCTGAAACCTATTCGAG 58.754 41.667 1.58 0.00 0.00 4.04
496 497 5.221762 TGACCCTTTTCTGAAACCTATTCGA 60.222 40.000 1.58 0.00 0.00 3.71
497 498 5.001232 TGACCCTTTTCTGAAACCTATTCG 58.999 41.667 1.58 0.00 0.00 3.34
498 499 6.894339 TTGACCCTTTTCTGAAACCTATTC 57.106 37.500 1.58 0.00 0.00 1.75
499 500 7.125053 TGTTTTGACCCTTTTCTGAAACCTATT 59.875 33.333 1.58 0.00 0.00 1.73
500 501 6.609616 TGTTTTGACCCTTTTCTGAAACCTAT 59.390 34.615 1.58 0.00 0.00 2.57
501 502 5.952947 TGTTTTGACCCTTTTCTGAAACCTA 59.047 36.000 1.58 0.00 0.00 3.08
502 503 4.775253 TGTTTTGACCCTTTTCTGAAACCT 59.225 37.500 1.58 0.00 0.00 3.50
503 504 4.868171 GTGTTTTGACCCTTTTCTGAAACC 59.132 41.667 1.58 0.00 0.00 3.27
504 505 4.561213 CGTGTTTTGACCCTTTTCTGAAAC 59.439 41.667 1.58 0.00 0.00 2.78
505 506 4.459685 TCGTGTTTTGACCCTTTTCTGAAA 59.540 37.500 0.00 0.00 0.00 2.69
506 507 4.011023 TCGTGTTTTGACCCTTTTCTGAA 58.989 39.130 0.00 0.00 0.00 3.02
507 508 3.611970 TCGTGTTTTGACCCTTTTCTGA 58.388 40.909 0.00 0.00 0.00 3.27
508 509 4.364415 TTCGTGTTTTGACCCTTTTCTG 57.636 40.909 0.00 0.00 0.00 3.02
509 510 5.394224 TTTTCGTGTTTTGACCCTTTTCT 57.606 34.783 0.00 0.00 0.00 2.52
510 511 6.656314 AATTTTCGTGTTTTGACCCTTTTC 57.344 33.333 0.00 0.00 0.00 2.29
511 512 6.621812 GCAAATTTTCGTGTTTTGACCCTTTT 60.622 34.615 0.00 0.00 33.24 2.27
512 513 5.163804 GCAAATTTTCGTGTTTTGACCCTTT 60.164 36.000 0.00 0.00 33.24 3.11
513 514 4.331443 GCAAATTTTCGTGTTTTGACCCTT 59.669 37.500 0.00 0.00 33.24 3.95
514 515 3.868661 GCAAATTTTCGTGTTTTGACCCT 59.131 39.130 0.00 0.00 33.24 4.34
515 516 3.001838 GGCAAATTTTCGTGTTTTGACCC 59.998 43.478 0.00 0.00 33.22 4.46
516 517 3.302156 CGGCAAATTTTCGTGTTTTGACC 60.302 43.478 0.00 0.00 35.40 4.02
517 518 3.839600 GCGGCAAATTTTCGTGTTTTGAC 60.840 43.478 10.96 0.00 35.48 3.18
518 519 2.282820 GCGGCAAATTTTCGTGTTTTGA 59.717 40.909 10.96 0.00 33.24 2.69
519 520 2.029728 TGCGGCAAATTTTCGTGTTTTG 59.970 40.909 0.00 0.00 34.30 2.44
520 521 2.029849 GTGCGGCAAATTTTCGTGTTTT 59.970 40.909 3.23 0.00 0.00 2.43
521 522 1.590698 GTGCGGCAAATTTTCGTGTTT 59.409 42.857 3.23 0.00 0.00 2.83
522 523 1.202359 AGTGCGGCAAATTTTCGTGTT 60.202 42.857 3.23 0.00 0.00 3.32
523 524 0.383949 AGTGCGGCAAATTTTCGTGT 59.616 45.000 3.23 0.00 0.00 4.49
524 525 0.777631 CAGTGCGGCAAATTTTCGTG 59.222 50.000 3.23 1.02 0.00 4.35
525 526 0.665835 TCAGTGCGGCAAATTTTCGT 59.334 45.000 3.23 0.00 0.00 3.85
526 527 1.981254 ATCAGTGCGGCAAATTTTCG 58.019 45.000 3.23 6.38 0.00 3.46
527 528 3.832276 TGTATCAGTGCGGCAAATTTTC 58.168 40.909 3.23 0.00 0.00 2.29
528 529 3.932545 TGTATCAGTGCGGCAAATTTT 57.067 38.095 3.23 0.00 0.00 1.82
529 530 3.005261 TGTTGTATCAGTGCGGCAAATTT 59.995 39.130 3.23 0.00 0.00 1.82
530 531 2.556189 TGTTGTATCAGTGCGGCAAATT 59.444 40.909 3.23 0.00 0.00 1.82
531 532 2.095263 GTGTTGTATCAGTGCGGCAAAT 60.095 45.455 3.23 1.43 0.00 2.32
532 533 1.265635 GTGTTGTATCAGTGCGGCAAA 59.734 47.619 3.23 0.00 0.00 3.68
533 534 0.871722 GTGTTGTATCAGTGCGGCAA 59.128 50.000 3.23 0.00 0.00 4.52
534 535 0.250081 TGTGTTGTATCAGTGCGGCA 60.250 50.000 0.00 0.00 0.00 5.69
535 536 0.443869 CTGTGTTGTATCAGTGCGGC 59.556 55.000 0.00 0.00 0.00 6.53
536 537 0.443869 GCTGTGTTGTATCAGTGCGG 59.556 55.000 0.00 0.00 34.57 5.69
537 538 1.147473 TGCTGTGTTGTATCAGTGCG 58.853 50.000 0.00 0.00 34.57 5.34
538 539 3.624326 TTTGCTGTGTTGTATCAGTGC 57.376 42.857 0.00 0.00 34.57 4.40
539 540 3.976942 GCTTTTGCTGTGTTGTATCAGTG 59.023 43.478 0.00 0.00 43.35 3.66
540 541 4.228912 GCTTTTGCTGTGTTGTATCAGT 57.771 40.909 0.00 0.00 43.35 3.41
556 557 6.417930 GTCAAGTTCTTTATTCGCAAGCTTTT 59.582 34.615 0.00 0.00 37.18 2.27
563 564 6.427150 GTTTCAGTCAAGTTCTTTATTCGCA 58.573 36.000 0.00 0.00 0.00 5.10
577 578 1.205657 GTCTGCGACGTTTCAGTCAA 58.794 50.000 14.80 0.00 40.98 3.18
589 590 2.355837 GCGTCCTGTTGTCTGCGA 60.356 61.111 0.00 0.00 0.00 5.10
591 592 1.287730 CTCAGCGTCCTGTTGTCTGC 61.288 60.000 0.00 0.00 40.09 4.26
592 593 1.287730 GCTCAGCGTCCTGTTGTCTG 61.288 60.000 0.00 0.00 40.09 3.51
593 594 1.005630 GCTCAGCGTCCTGTTGTCT 60.006 57.895 0.00 0.00 40.09 3.41
596 597 2.031516 CCTGCTCAGCGTCCTGTTG 61.032 63.158 0.00 0.00 40.09 3.33
597 598 2.345244 CCTGCTCAGCGTCCTGTT 59.655 61.111 0.00 0.00 40.09 3.16
633 635 5.045215 TGCTTTGCTCTCTTTGAACAATTG 58.955 37.500 3.24 3.24 31.73 2.32
634 636 5.045872 GTGCTTTGCTCTCTTTGAACAATT 58.954 37.500 0.00 0.00 31.73 2.32
635 637 4.340381 AGTGCTTTGCTCTCTTTGAACAAT 59.660 37.500 0.00 0.00 31.73 2.71
636 638 3.696051 AGTGCTTTGCTCTCTTTGAACAA 59.304 39.130 0.00 0.00 0.00 2.83
637 639 3.282021 AGTGCTTTGCTCTCTTTGAACA 58.718 40.909 0.00 0.00 0.00 3.18
638 640 3.978718 AGTGCTTTGCTCTCTTTGAAC 57.021 42.857 0.00 0.00 0.00 3.18
639 641 4.675510 CAAAGTGCTTTGCTCTCTTTGAA 58.324 39.130 11.12 0.00 42.66 2.69
640 642 4.297299 CAAAGTGCTTTGCTCTCTTTGA 57.703 40.909 11.12 0.00 42.66 2.69
734 750 2.718563 TGCTGCATCATTGTGTCAGAT 58.281 42.857 0.00 0.00 0.00 2.90
796 1073 4.213059 CAGAGTGTGAAGCTTCCTTTTCTC 59.787 45.833 23.42 20.02 0.00 2.87
832 1110 2.284258 AGCTCTTCCGTCCTGGCT 60.284 61.111 0.00 0.00 37.80 4.75
833 1111 2.185608 GAGCTCTTCCGTCCTGGC 59.814 66.667 6.43 0.00 37.80 4.85
834 1112 1.999071 CTCGAGCTCTTCCGTCCTGG 61.999 65.000 12.85 0.00 40.09 4.45
835 1113 1.431440 CTCGAGCTCTTCCGTCCTG 59.569 63.158 12.85 0.00 0.00 3.86
836 1114 2.411504 GCTCGAGCTCTTCCGTCCT 61.412 63.158 29.88 0.00 38.21 3.85
837 1115 2.103340 GCTCGAGCTCTTCCGTCC 59.897 66.667 29.88 0.00 38.21 4.79
851 1129 1.604604 TTTGTACAAGTGCCCAGCTC 58.395 50.000 8.56 0.00 0.00 4.09
862 1162 4.710423 ACATTGCGCCATATTTGTACAA 57.290 36.364 4.18 3.59 0.00 2.41
871 1171 3.814625 TGGAGAAATACATTGCGCCATA 58.185 40.909 4.18 0.00 39.92 2.74
880 1180 4.595762 GCAATGCCATGGAGAAATACAT 57.404 40.909 18.40 4.26 0.00 2.29
899 1199 6.541907 TGTATATATGCTTCTTGGATTGGCA 58.458 36.000 2.37 0.00 37.32 4.92
901 1201 9.234827 TCAATGTATATATGCTTCTTGGATTGG 57.765 33.333 2.37 0.00 0.00 3.16
937 1269 2.261361 CGACGGATGCAGTGACCA 59.739 61.111 0.00 0.00 0.00 4.02
938 1270 2.279502 TAGCGACGGATGCAGTGACC 62.280 60.000 0.00 0.00 33.85 4.02
939 1271 1.138883 TAGCGACGGATGCAGTGAC 59.861 57.895 0.00 0.00 33.85 3.67
940 1272 1.138883 GTAGCGACGGATGCAGTGA 59.861 57.895 0.00 0.00 33.85 3.41
941 1273 1.139734 AGTAGCGACGGATGCAGTG 59.860 57.895 0.00 0.00 33.85 3.66
942 1274 1.139734 CAGTAGCGACGGATGCAGT 59.860 57.895 0.00 0.00 33.85 4.40
943 1275 1.589993 CCAGTAGCGACGGATGCAG 60.590 63.158 0.00 0.00 33.85 4.41
944 1276 2.004808 CTCCAGTAGCGACGGATGCA 62.005 60.000 9.99 0.00 31.01 3.96
945 1277 1.299468 CTCCAGTAGCGACGGATGC 60.299 63.158 9.99 0.00 31.01 3.91
946 1278 1.002684 GTACTCCAGTAGCGACGGATG 60.003 57.143 9.99 7.77 31.01 3.51
947 1279 1.307097 GTACTCCAGTAGCGACGGAT 58.693 55.000 9.99 5.21 31.01 4.18
948 1280 0.745845 GGTACTCCAGTAGCGACGGA 60.746 60.000 9.38 9.38 38.91 4.69
949 1281 1.726265 GGTACTCCAGTAGCGACGG 59.274 63.158 0.00 2.36 38.91 4.79
954 1286 4.022676 GCTCAAGATAGGTACTCCAGTAGC 60.023 50.000 7.71 7.71 46.22 3.58
955 1287 5.240623 CAGCTCAAGATAGGTACTCCAGTAG 59.759 48.000 0.00 0.00 41.75 2.57
956 1288 5.133941 CAGCTCAAGATAGGTACTCCAGTA 58.866 45.833 0.00 0.00 41.75 2.74
957 1289 3.957497 CAGCTCAAGATAGGTACTCCAGT 59.043 47.826 0.00 0.00 41.75 4.00
958 1290 3.243704 GCAGCTCAAGATAGGTACTCCAG 60.244 52.174 0.00 0.00 41.75 3.86
959 1291 2.695666 GCAGCTCAAGATAGGTACTCCA 59.304 50.000 0.00 0.00 41.75 3.86
960 1292 2.036604 GGCAGCTCAAGATAGGTACTCC 59.963 54.545 0.00 0.00 41.75 3.85
961 1293 2.962421 AGGCAGCTCAAGATAGGTACTC 59.038 50.000 0.00 0.00 41.75 2.59
962 1294 3.039252 AGGCAGCTCAAGATAGGTACT 57.961 47.619 0.00 0.00 46.37 2.73
963 1295 4.145807 TCTAGGCAGCTCAAGATAGGTAC 58.854 47.826 0.00 0.00 0.00 3.34
964 1296 4.402829 CTCTAGGCAGCTCAAGATAGGTA 58.597 47.826 0.00 0.00 0.00 3.08
965 1297 3.230134 CTCTAGGCAGCTCAAGATAGGT 58.770 50.000 0.00 0.00 0.00 3.08
966 1298 2.562298 CCTCTAGGCAGCTCAAGATAGG 59.438 54.545 0.00 0.00 0.00 2.57
967 1299 2.562298 CCCTCTAGGCAGCTCAAGATAG 59.438 54.545 0.00 0.00 0.00 2.08
968 1300 2.603021 CCCTCTAGGCAGCTCAAGATA 58.397 52.381 0.00 0.00 0.00 1.98
969 1301 1.422531 CCCTCTAGGCAGCTCAAGAT 58.577 55.000 0.00 0.00 0.00 2.40
970 1302 2.907703 CCCTCTAGGCAGCTCAAGA 58.092 57.895 0.00 0.00 0.00 3.02
980 1312 2.840102 CACCCGGAGCCCTCTAGG 60.840 72.222 0.73 0.00 39.47 3.02
981 1313 3.541713 GCACCCGGAGCCCTCTAG 61.542 72.222 0.73 0.00 0.00 2.43
999 1331 1.783031 CGAAGGATGCAGCAGCCATC 61.783 60.000 31.03 26.52 43.12 3.51
1011 1343 3.118112 TCTCGAGGTAGGTAACGAAGGAT 60.118 47.826 13.56 0.00 46.39 3.24
1045 1377 4.344865 GAACCCCAGCAGCCGGAA 62.345 66.667 5.05 0.00 0.00 4.30
1096 1428 1.507141 CCAGAGCCACCGTTTGTCAC 61.507 60.000 0.00 0.00 0.00 3.67
1098 1430 0.321653 ATCCAGAGCCACCGTTTGTC 60.322 55.000 0.00 0.00 0.00 3.18
1099 1431 0.321653 GATCCAGAGCCACCGTTTGT 60.322 55.000 0.00 0.00 0.00 2.83
1101 1433 0.321653 GTGATCCAGAGCCACCGTTT 60.322 55.000 0.00 0.00 0.00 3.60
1119 1451 1.533469 GGCACTCACCGTACTCAGGT 61.533 60.000 0.00 0.00 43.97 4.00
1227 1559 4.116238 CCTTATCACTCTTCTTCTTCCGC 58.884 47.826 0.00 0.00 0.00 5.54
1303 1641 2.923035 CTCCACCACCGGACCACT 60.923 66.667 9.46 0.00 0.00 4.00
1308 1646 4.316823 AGAGCCTCCACCACCGGA 62.317 66.667 9.46 0.00 0.00 5.14
1381 1719 1.071987 CAGCAGAGACCAGGCACAA 59.928 57.895 0.00 0.00 0.00 3.33
1382 1720 2.745698 CAGCAGAGACCAGGCACA 59.254 61.111 0.00 0.00 0.00 4.57
1473 1820 1.001406 CTCAACTGGTCTCCTTCGCTT 59.999 52.381 0.00 0.00 0.00 4.68
1513 1860 3.127030 CCTTTGATTAGTTGCCTTCCGAC 59.873 47.826 0.00 0.00 0.00 4.79
1515 1862 3.127030 GTCCTTTGATTAGTTGCCTTCCG 59.873 47.826 0.00 0.00 0.00 4.30
1586 1933 0.742281 CAGCTGGGTGAACAGATCGG 60.742 60.000 5.57 0.00 40.97 4.18
1626 1973 3.818787 CGCTGCAAGGCATCCACC 61.819 66.667 0.00 0.00 38.13 4.61
1627 1974 3.818787 CCGCTGCAAGGCATCCAC 61.819 66.667 0.00 0.00 38.13 4.02
1636 1983 4.927782 AACGCTGTCCCGCTGCAA 62.928 61.111 0.00 0.00 41.39 4.08
1667 2020 1.967535 CCGTTCCTGTCAGCTCTGA 59.032 57.895 0.00 0.00 37.24 3.27
1669 2022 1.882989 GAGCCGTTCCTGTCAGCTCT 61.883 60.000 3.16 0.00 45.11 4.09
1679 2032 2.048127 AGAGTTGCGAGCCGTTCC 60.048 61.111 0.00 0.00 0.00 3.62
1714 2067 3.044305 GATATCGCACTGCCGGCC 61.044 66.667 26.77 7.25 0.00 6.13
1729 2082 1.827969 GCTGATAGTGATAGGGCCGAT 59.172 52.381 0.00 0.00 0.00 4.18
1730 2083 1.257743 GCTGATAGTGATAGGGCCGA 58.742 55.000 0.00 0.00 0.00 5.54
1764 2132 2.758009 GAGCTCTTGATCAGCATCCTC 58.242 52.381 6.43 3.25 39.56 3.71
1932 2300 0.318762 AAGGGTCACGCTCAAGAGAC 59.681 55.000 0.00 0.00 0.00 3.36
1965 2333 2.288666 GCATTTGTAAGATCGGCCAGA 58.711 47.619 2.24 0.78 0.00 3.86
1969 2337 1.856014 GCGTGCATTTGTAAGATCGGC 60.856 52.381 0.00 0.00 0.00 5.54
1992 2360 5.849604 GCAATGTACGATTGTGATGATGATG 59.150 40.000 15.05 0.00 0.00 3.07
1993 2361 5.049198 GGCAATGTACGATTGTGATGATGAT 60.049 40.000 15.05 0.00 0.00 2.45
1994 2362 4.273235 GGCAATGTACGATTGTGATGATGA 59.727 41.667 15.05 0.00 0.00 2.92
2058 2426 2.673610 GCTCTTGTAGAGTCCACTGCTG 60.674 54.545 5.67 0.00 44.12 4.41
2136 2504 3.190849 TACTCCGCCGAGACGACG 61.191 66.667 9.16 0.00 38.52 5.12
2161 2532 1.984570 TGCTAGCCGAAGAGCAGGT 60.985 57.895 13.29 0.00 43.64 4.00
2259 2633 5.047235 TGACAGGAGAAAGTAGTAAAGGAGC 60.047 44.000 0.00 0.00 0.00 4.70
2269 3509 4.623932 ACAAGCATGACAGGAGAAAGTA 57.376 40.909 0.00 0.00 0.00 2.24
2291 3531 4.872691 CAGCTTCTCAAGACCAAATCGTAT 59.127 41.667 0.00 0.00 0.00 3.06
2321 3561 2.170187 TGCATTTTCAGGGCAACAAGTT 59.830 40.909 0.00 0.00 34.05 2.66
2375 3615 3.963374 TGACACACCAATTCCATTTCCAA 59.037 39.130 0.00 0.00 0.00 3.53
2402 3642 3.845860 AGAGGGAGTAATATTCTCGCCA 58.154 45.455 19.11 0.00 42.99 5.69
2417 3657 9.750783 ACGCTCTTATATTAGTTTATAGAGGGA 57.249 33.333 16.73 0.00 37.30 4.20
2464 3704 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
2465 3705 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
2467 3707 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2469 3709 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2470 3710 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2472 3712 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2478 3718 8.579863 GCTAAATACTCCCTCCGTAAACTAATA 58.420 37.037 0.00 0.00 0.00 0.98
2480 3720 6.380846 TGCTAAATACTCCCTCCGTAAACTAA 59.619 38.462 0.00 0.00 0.00 2.24
2482 3722 4.713321 TGCTAAATACTCCCTCCGTAAACT 59.287 41.667 0.00 0.00 0.00 2.66
2483 3723 4.807834 GTGCTAAATACTCCCTCCGTAAAC 59.192 45.833 0.00 0.00 0.00 2.01
2484 3724 4.440525 CGTGCTAAATACTCCCTCCGTAAA 60.441 45.833 0.00 0.00 0.00 2.01
2485 3725 3.067180 CGTGCTAAATACTCCCTCCGTAA 59.933 47.826 0.00 0.00 0.00 3.18
2487 3727 1.407979 CGTGCTAAATACTCCCTCCGT 59.592 52.381 0.00 0.00 0.00 4.69
2488 3728 1.269621 CCGTGCTAAATACTCCCTCCG 60.270 57.143 0.00 0.00 0.00 4.63
2489 3729 1.070289 CCCGTGCTAAATACTCCCTCC 59.930 57.143 0.00 0.00 0.00 4.30
2490 3730 2.037144 TCCCGTGCTAAATACTCCCTC 58.963 52.381 0.00 0.00 0.00 4.30
2492 3732 1.202615 GGTCCCGTGCTAAATACTCCC 60.203 57.143 0.00 0.00 0.00 4.30
2493 3733 1.483415 TGGTCCCGTGCTAAATACTCC 59.517 52.381 0.00 0.00 0.00 3.85
2494 3734 2.973694 TGGTCCCGTGCTAAATACTC 57.026 50.000 0.00 0.00 0.00 2.59
2495 3735 3.706600 TTTGGTCCCGTGCTAAATACT 57.293 42.857 0.00 0.00 0.00 2.12
2496 3736 3.128068 CCTTTTGGTCCCGTGCTAAATAC 59.872 47.826 0.00 0.00 34.07 1.89
2576 3902 4.578928 ACCTGACTTAAATGTTTCGTGCTT 59.421 37.500 0.00 0.00 0.00 3.91
2582 3908 9.575783 TGTTTAAACACCTGACTTAAATGTTTC 57.424 29.630 17.01 0.00 41.35 2.78
2605 3931 9.251440 TGTAGTGTAAGGTGATACTTAGATGTT 57.749 33.333 0.00 0.00 33.87 2.71
2645 3971 5.294356 AGTCGTGTTAATCTTTGTGTAGCA 58.706 37.500 0.00 0.00 0.00 3.49
2692 4019 8.761497 GCTTGTCGCTGTTAATTATAGAACATA 58.239 33.333 2.40 0.00 35.13 2.29
2693 4020 7.279981 TGCTTGTCGCTGTTAATTATAGAACAT 59.720 33.333 2.40 0.00 40.11 2.71
2695 4022 7.000575 TGCTTGTCGCTGTTAATTATAGAAC 57.999 36.000 2.40 0.00 40.11 3.01
2716 4046 4.883585 TGTTCTTGTGAAGATGTTTCTGCT 59.116 37.500 0.00 0.00 37.38 4.24
2756 4086 1.133407 TCGTGTTTGTGGGCAAAGTTC 59.867 47.619 0.00 0.00 44.27 3.01
2760 4090 1.546476 AGTTTCGTGTTTGTGGGCAAA 59.454 42.857 0.00 0.00 41.77 3.68
2775 4105 3.055819 TGATCCAGCTCAGTGGTAGTTTC 60.056 47.826 0.00 0.00 38.88 2.78
2810 4140 2.597510 GGGCTGAAGTGCGGGTTT 60.598 61.111 0.00 0.00 0.00 3.27
2814 4144 2.110967 CATGAGGGCTGAAGTGCGG 61.111 63.158 0.00 0.00 0.00 5.69
2919 4249 2.106566 TGTTGTGACAAATTGTGCCCT 58.893 42.857 2.20 0.00 31.49 5.19
2972 4302 3.064931 GGTCCACACTTGCACTACTTAC 58.935 50.000 0.00 0.00 0.00 2.34
3029 4359 1.337823 ACCGATGAAACCCAAGAGACG 60.338 52.381 0.00 0.00 0.00 4.18
3038 4368 1.209747 AGGAAGCCTACCGATGAAACC 59.790 52.381 0.00 0.00 28.47 3.27
3047 4377 2.570302 TGTACCAAGAAGGAAGCCTACC 59.430 50.000 0.00 0.00 41.22 3.18
3223 4553 8.802267 ACTGCCAAGCTAAGTTCATTTTATTTA 58.198 29.630 0.00 0.00 0.00 1.40
3227 4557 5.534654 ACACTGCCAAGCTAAGTTCATTTTA 59.465 36.000 0.00 0.00 0.00 1.52
3228 4558 4.342092 ACACTGCCAAGCTAAGTTCATTTT 59.658 37.500 0.00 0.00 0.00 1.82
3231 4561 3.077359 GACACTGCCAAGCTAAGTTCAT 58.923 45.455 0.00 0.00 0.00 2.57
3253 4583 4.142556 ACCGGTTGTGTTTGTCTTTACTTG 60.143 41.667 0.00 0.00 0.00 3.16
3270 4600 1.337118 AATCACCATTTGCACCGGTT 58.663 45.000 2.97 0.00 0.00 4.44
3284 4614 3.189910 GGGTTTTCCGAACAGGTAATCAC 59.810 47.826 0.00 0.00 41.82 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.