>input_sequence_54893
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATGGCTGCTGCATCCTTCGTTACCTACCT
CGAGACGCCTAGAGAGTTCCGGCTGCTGGGGTTCCGGGCGCCGCCGCCGTCTCCGGTCACCGGCGTTGTGACAAACGGTG
GCTCTGGATCACCTGAGTACGGTGAGTGCCCCGACGGCAACGAAGATGACGAGGTCGGCAGGTTCCTGCGTCGCTCCGCC
AAGGTCCCGGTGCTGCGGCTGCCGGAGAGGGCCATCCCGCG------GAAGAAGAAGAGTGATAAGGCGGCGTGGGCTCC
CCCAGTCATCGACATGCGCCTGCTGGACACGCCGGATGGCAGTGGTCCGGTGGTGGAGGCTCTGAGGTCGGCGGCCGTCG
CGTTTGGCTGCTTCCAGGTGGTTGGCCATGGGGTCAATTTGTGCCTGGTCTCTGCTGCGGCGGGGAGGGCGAGTTCGCCT
ACGCCGGAGGAGGCCGGTGGAGAAGA---------TGGTGAGGAGCTGTGGTGGTCACCAAGCGAAGGAGACCAGTTGAG
GTGCGAACTTGCCCATTTCGTCGGAAGGCAACTAATCAAAGGACTCTATATGATGCTAACCCCTGGTTTTGCCGTGTCCA
GGAACGGGGCAGCCGATCTGTTCACCCAGCTGGAGCAAACCGCAGCCAAACTGGTGGATGCCTTGCAGCGGGACAGCGTT
GGCGCCACCA------TGGTCAGAGCTGACAGGAACGGCTCGCAACTCTGCATCCGCACGCACCACGGCCGGCAGTGCGA
TATC---------------GGCCCTATCACTATCAGCCAGGACGACATCCTGAGGATGCTGATCAAGAGCTCGCGCTGCC
CGCGTGCTCTCGCTCTCCACCTCTGCCCCGGCGCCTCCACGTTCCACGTCTTCTCCCGGCAGCGGGGATGGTCCAGGTTC
CGCCCCCTCGGTGGCGCCGTCGTGGTCACCGTCGGAGACCAGCTTCAGGTGACGCACCAGTCTCTTGAGCGTGACCCTTT
TTTCAGACGAAATCTGGCCGATCTTACAAATGCACGCTGCATCATCATCACAATCGTACATTGCCTTCCGGTTTACCTGC
TTCGCTCTCCACATATGCAGGCATGCAGCAGTGGACTCTACAAGAGCGTGGCCGGGAAACCGGCTTACAGCGACGGCGAT
CTCCGAGCAGAACGCGGCTGCGACGTCGTC---TCGGCGGAGTACCTCCACACCTGCTCTTCGGCTAGCATGGAGAG---
CGAGCCCCTGGACGCGGATGCCGGGAAGACCATTCAGTTGAATGTGCAGATCATTGTAGCAGCTTGCCTTGTGCTCCTTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACTACTTTCTCCTG
TCATGCTTGTATACGATTTGGTCTTGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G275200
ACGAAAGAAATACCACGAACCAAATAATGCTGTAACGACTAAAGTTGGTTGGAACGAAACACTTCAACCCATTGTTATAT
GCAAGCTGCTCGTGCGTACTCAACCACTGGCATTGATAGGCTAAATTTCATGTTTTGACCCTTTTCTAAAACCTATTCGA
GATTTGATCCTAATTTGAAAAAAAATCGAGATCTGATCCTTTTGCTACCGTCAGGGATCATGACGGTAGGGTATAACAGC
CTACCGCCAAGGTCCCTGGCGGTAGGGTTGCATGCCTACTACCAAAAACCTTTTAAGTATTGAACACTGTGCGTGCTCGT
GTCTACCGCCAAGCACCTTGGCGGTAGGGTTGTGCGGGCTATCACCAGCCCAGTTGGCGGTAGCGATGTTTCCTACCGCC
AAAGTTCCTGGCGGTAGGCTGCTAGACCCTATCGCCATGGAGTCTGGCGATAGTAAAAGAGTCAGATCTCGAATTTTTTT
AAACTAGGGTCAAATCTCGAATAGGTTTCAGAAAAGGGTCAAAACACGAAAATTTGCCGCACTGATACAACACAGCAAAA
GCTTGCGAATAAAGAACTTGACTGAAACGTCGCAGACA-ACAGGACGCTGAGCAGGCCTTCATTTAAAGCAGTTCAATTG
TTCAAAGAGAGCAAAGCACTTTGTCGTCCGAGGAACATCTTTAACAGAACGCGGAAGGATATTTAGACAG----------
----CACAGACTGTTCCCTAGTATGGCTCATCTGACACAATGATGC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGCATCATTGCACCATCTTCTCTTTCG
AGCTGGCAATCTG--------------CCACAGAGAAAAGGAAGCTTCACACTCTGTC-CCTACAACAAAGCCAGGACGG
AAGAGCTCGAGCTGGG----------------------CACTTGTACAAATATGGCGCAATGTATTTCTCCATGGCATTG
CC--------------------------------AATCCAAGAAGCATATATACATTGATTGACCACCTGGTCACTGCAT
CCGTCGCTACTGGAGTACCTATCTTGAGCTGCCTAGAGGGCTCCGGGTGCGATGGCTGCTGCATCCTTCGTTACCTACCT
CGAGACGCCTAGAGAGTTCCGGCTGCTGGGGTTCCGGGCGCCGCCGCCGTCTCCGGTCACCGGCGTTGTGACAAACGGTG
GCTCTGGATCACCTGAGTACGGTGAGTGCCCCGACGGCAACGAAGATGACGAGGTCGGCAGGTTCCTGCGTCGCTCCGCC
AAGGTCCCGGTGCTGCGGCTGCCGGAGAGGGCCATCCCGCG------GAAGAAGAAGAGTGATAAGGCGGCGTGGGCTCC
CCCAGTCATCGACATGCGCCTGCTGGACACGCCGGATGGCAGTGGTCCGGTGGTGGAGGCTCTGAGGTCGGCGGCCGTCG
CGTTTGGCTGCTTCCAGGTGGTTGGCCATGGGGTCAATTTGTGCCTGGTCTCTGCTGCGGCGGGGAGGGCGAGTTCGCCT
ACGCCGGAGGAGGCCGGTGGAGAAGA---------TGGTGAGGAGCTGTGGTGGTCACCAAGCGAAGGAGACCAGTTGAG
GTGCGAACTTGCCCATTTCGTCGGAAGGCAACTAATCAAAGGACTCTATATGATGCTAACCCCTGGTTTTGCCGTGTCCA
GGAACGGGGCAGCCGATCTGTTCACCCAGCTGGAGCAAACCGCAGCCAAACTGGTGGATGCCTTGCAGCGGGACAGCGTT
GGCGCCACCA------TGGTCAGAGCTGACAGGAACGGCTCGCAACTCTGCATCCGCACGCACCACGGCCGGCAGTGCGA
TATC---------------GGCCCTATCACTATCAGCCAGGACGACATCCTGAGGATGCTGATCAAGAGCTCGCGCTGCC
CGCGTGCTCTCGCTCTCCACCTCTGCCCCGGCGCCTCCACGTTCCACGTCTTCTCCCGGCAGCGGGGATGGTCCAGGTTC
CGCCCCCTCGGTGGCGCCGTCGTGGTCACCGTCGGAGACCAGCTTCAGGTGACGCACCAGTCTCTTGAGCGTGACCCTTT
TTTCAGACGAAATCTGGCCGATCTTACAAATGCACGCTGCATCATCATCACAATCGTACATTGCCTTCCGGTTTACCTGC
TTCGCTCTCCACATATGCAGGCATGCAGCAGTGGACTCTACAAGAGCGTGGCCGGGAAACCGGCTTACAGCGACGGCGAT
CTCCGAGCAGAACGCGGCTGCGACGTCGTC---TCGGCGGAGTACCTCCACACCTGCTCTTCGGCTAGCATGGAGAG---
CGAGCCCCTGGACGCGGATGCCGGGAAGACCATTCAGTTGAATGTGCAGATCATTGTAGCAGCTTGCCTTGTGCTCCTTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACTACTTTCTCCTG
TCATGCTTGTATACGATTTGGTCTTGAGAAGCTGCAGCAGAACTTGTTGCCCTGAAAATGCAGCTCGGTTTTTATTTCAA
GTTCAGCTCGGCTTTTGGAAATGGAATTGGTGTGTCAGTTTTGGCGAGAATATTACTCCCTCTATAAACTAATATAAGAG
CGTTTAGATTACTACTTTAGTATTCTAAACGCTCTTATATTAGTTTACGGAGGGAG------------------------
--------------------------------------------------------------TATTTAGCACGGGACCAA
AAGGATAGGGTAGGAAGCAAGAACCTCTTTGGGGCTCTCACACGACCACACGACCAGACAGAAGCACGAAACATTTAAGT
CAGGTGTTTAAACATCTAAGTATCACCTTACACTACAGTCAAGAGTCGTCTGCTACACAAA-GATTAACACGACTACAAA
ACATTTACTACTGTACACTATG---TTCTATAATTAACAGCGACAAGCAGAAACATCTTCACAAGAACACGCTAGGCCGC
ATTCAGAACTTTGCCCACAAACACGAAACTACCACTGAGCTGGATCAAAAAGATGAGGCAAACCCGCACTTCAGCCCTCA
TGGCAAAAGATTTCTACGATACGGTACGCCCATAACATACTGAAGCAAGGTAGAGATTCTTGGACCATTTCTCCTGCAAT
GACACAAAAGGGCACAATTTGTCACAACAATTTCACAAGATAAGAATTACAGACGTTATCAGTAAGTAGTGCAAGTGTGG
ACCTTCACATGCTGACTGGGGAAAGCAGATGTTCTCAGCGTCTCTTGGGTTTCATCGGTAGGCTTCCTTCTTGGTACACT
TAAGATCAATGCAGTCTGATCCCAAGTCGCAGCAACTGCTGTTATCCGGTAACCACAGTCCCACCTCTTATGGACTCCCT
CACTAGGGTACAAGAAGTCCAGCTCAACAACCTGGAAAATAAATGCATGACAAACAAGGAATGCAAAATAAATAAATAAA
ATGAACTTAGCTTGGCAGTGTCCAAGTAAAGACAAACACAACCGGTGCAAATGGTGATTACCTGTTCGGAAAACCCT
>chr3B_547
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACAACACACCGAAA
GCTAGCGAATAAAGAACCTGACTGAAACGCCATGGAGCGACAGGACGCTGAGCAGGCCTTCATTTAAAGCAGTTG-----
---AAAGAGAGCAAAGCACTTTGTCGTCCGAGGAACATCTTTAACAGAACGCGGAAGGATATTGAGACAGTACACAACAC
ACAGCACAGACTGTTCCCTAGTATGGCTCGTCTGACACAATGATGTACTCCCTCCATTCCACAATGTAGTGCTTCCTCTA
TCTACGTGCTTCAACTTTGACCGTAAATTTAACTATCAAGACCGATTGCGGCGGGAGCAAAAATTATATCAGTGAATTCG
TATTCGAAAGAAGTTTTCAATTATATAATTTTTTCTCCCGCCGCAGTTGGTCTCGTTGGTTAAATTTATGGTCAAAGTTG
GACCTCGGGAAGCGCGGGCGCACTATATTTTGGAATGGAGGGAGTACGTACCTAGCATCATTGCACCACCTTCTCTTTGG
AGCTGGCAATCTGGTTTCTCATCTCTGCCACAAAGAAAAGGAAGCTTCACACTCTGTC-CCTACAACAAG--------GG
AAGGGCTCAAGCTGGGCGCCTACAAATAATCTCCTGAGCACCTGTACAAACATGGCGCAGTGTCTCTCCCCATGGCATGG
ACAACCATACGTGTAAGTTCGAGCAGCCGGAACTAATCCAATAAGCATACATACATCGATTGACCACC------------
---------------------------------------------GTTGCCATGGCTGCTGCGTCCTTCGCTACCTACCT
CGAGACGCCTAGAGAGCTCCGGGTGCTGGGGTTCCGGGCGCCGCCCCCGTCTCCGGTCACCGGCGTTCTATCCAACGGTG
GCTCTGGATCCCCTGAGTACGGCGAGTGCCCCGACGGCAACGAAGATGACGAGGTCGGCAGGTTCCTGCGTCGCTCCGCC
AGGGTCCTGGTGCTGCGGCTGCCCGAGAGGGCCATCCCACGGAAGAAGAAGAAGAAGAGTGATAAGGCGGTGTGGGCTCC
CCCAGTCATCGACATGCGCCTGCTGGCCTCGCTGG------GTGGGCCGGCGGTGGAGGCTCTGAGGTCGGCGGCCGTCG
CGCTTGGCTGCTTCCAGGTGGTTGGGCATGGGGTCAATGAGTGCTTGGTCTCAGCTGCGGCGGGGAGGGCGAGTTCGCCT
ACGCCGGAGGAGGCCGGTGGAGAAGA---------TGGTGAGGAGCTGTGGTGGTCACCGAGCGAAGGAGACCAGTTGAG
GTGCCAACTTGCCCATTTCATTGGAAGGCAACTAATCAAAGGACTCTATATGATGCTAACCCCTGGTTTTGCTGTGTCCA
GGAAGGGAGCAGACGATCTGTTCACCCAGCTGGAGCAAACCGCAGCCAAACTCATGGACGCCCTGCGGCGGGACAGCGTT
GGCGCCACCGATTCCCTGGCCGGAGCTGACACGAACCGCTCGCAACTCTGCATCCGCACGCACCACCGCCGGCAGTGCGA
TGGCGGCAGCGGCTCTGTTGGCCCCATCACTATCAGCGAGGACGACATGCTCAGGATGCTGATCAAGAGCTCACGCCGCC
CACGGGCTCTCGCTCTCCACCTCTGCCCCGGCGCCTCCACGTTCCACGTCTTCTCCCGGCAGCGGGGATGGTCCAGGTTC
CGCCCCCTCGGCGGCGCCGTCGTGGTCACCGTCGGAGACCAGCTTCAGGTGACGCACCAA--TCTTGAGCGTGACCTTTT
TTTGAGACGAAAACCGACTGACCTTGCAAATGCACGCTG---CATCATCACAATCATACATTGTCTTACGGTTTACCTGC
TTCGCGCTCCACGTATGCAGGCATGGAGCAGTGGACTCTACAAGAGCGTGGCCGGGAAACCGGCTTACAGCAACGACGAT
CTCGGAGCAGACCGCGGCTGTGATGTCGTCATCTCGGCGGAGTACCTCCACTCCTGCTCTTCGGCTGGCATGGAGA---A
CGAGCCCCCGGACGCGGATGCCGGGAAGATCATTCAGTTGAATGTGCAGATCATTGTAGCAGCTTGCCTTGTACTCCTTT
ACGGCAAAAACAACATATTTGACATGTGACCGAAATTAATTCACGAAATAAACTGTCCTTAAAAAAATTTCACACCTCCG
ACCCTATCATGTAGCGCCCGACAGCCAGGCGCCACACTGCACTGTGCAGCGTCTGAACGTAAGGCGCTACACACCTAACA
AGCGTCGCACCTCGGACTGCCTGAAAATTGCTAAGTTAGTATGCAACGCCTAAAAGCTAGGCGTCACACTATACAGTGTA
ACGCCTAGCATCTAGGCGTTGCATGTACCACCTACACGTTCGCCTTTCGCAACAGTTGCATGCATGTGCCTACGCCTCAT
CACATGTACACTGCTCCATAGTCCAGTGGACCTTTGATTGCACCGATCGATTGACCACCAGGCCATGCAAAAGCGGAGGC
CGATTAACCAACACGGGTGGGTCGGACACATGCATGTGAGCGCGCTTGCATCGGAGAAATCACCATGCACCCCGGCCGGC
CTTACGTACGTGCGGGAACGTCAACCACACGATCCAGCGGGCGTTTGACTGACCAGATCGATTGATTACCAAGCCATGCA
GAAGCGGGGGCGATTAGTCAACACCGGCGGCTCGGACACATGCATGCGGGGGAAATCACTAGTGGCCACTAGTGCAACGC
CTAGTCTCTCAGTCGTTGCACACTGACTTAGTAATTTTCAAACTGCTCGAGGTGCGATGCTTGCCAGGTATGTAGCGCCT
TTCAGTCAGGCGCCGCATAGTATAGTGTGGCGCCTAGTTGTCGGGCGCTACACGAAAAGGTCAGCGGAGCGAATTTTTTT
TAAGAACGGTTCATTTTATGAATTCTTTTTGACCACAGGTCAAATTTGTCATTTCTGCCCTCCTTTACCACTTTCTCCTA
TCATGCTTGTGTACCATTTGGTCTTGAGAGGCTGCAGCAGGACATGTTGCCCTGAAAATGCAGCTC----TTTACTTCAA
GTTCAGCTCGACTTGTGGAAATGGAACCAGCGTGTCAGTTTGGGTGAGAATATGAGCATGTTGGTTTGATGCCAAAAATT
AGCATGCCAAATAGTGGCTAGTGCTTGATTGGTTACCAAGTTTACTTGCCAACCTCACAAGAAGTTACCAATTTTTGGCA
ACTTTTGATATTGCCAATTGTTGGCAATGCCAAATGTTGGCATCAGACCAATTATCCTCTATTATTTAGCACCC-----A
AAGGATAGGGTAGGAAGCGAGAACCTCGTTGGGGCTCTC--------ACGCGACCACACAGGAGCACAAAACA-TTAAGT
CAGGTGTTTACACATCTAAGTATCACCTTACACTAGAGTCAAGAGTCGTCCGCTACAGAAAGGATTAACACGACTACAAA
ACATTTACTACTGTACACACTATTTTTCTATAATTAACAGCGACAGGCAGAAACATCTTCACAAGAACACACTAGGCCGC
ATTCACAAC-TTGCCCACAAACAGAAAACTACTGCTGAGCTGGATCAAAAAGATGAGGTTAACTCACGCTTCAGCTCTCA
TGGCAAAGGATTTCTACGATACGGTACGCCCATAACATACTGAAGCAAGGTAGAGATTCTTGGACCATTTCTCCTGCAAT
GACACAA--GGGCACAATTTGTCACAAGAATTTCACAAGATAAGAATTACAGACGTTATCATTAAGTAGTGCAAGTGTGG
ACCTTCACATGCTGACTGGGGAAAGCAGATGTTCTCAGTGTCTCTTGAGTTTCATCAGTAGGCTTCCTTCTTGGTACACT
TAAGATCAATGCAGTCTGATCCCAAGTCGCAGCAACTGCTGTTATTCGGTAACCACTATCCCACCTCTTATGGACTCCCT
CACTAGGGTACAAGAAGTCCAGCTCAACAACCTGGAAAATAAATGCATGACAAACAAGGAATGCAAAATAAACAAAATAA
CTGAACTTAGCTTGGCAGTGTCGAAGTAAA--CAAACACCACCAGTGCAAATGATGA-TACCTGTTCCGAAAACCCT
>chr3D_599
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ACAGGACGCTGAGCATGCCTTCATTTAAAGCAGTTG-----
---AAAGGGAGCAAAGCACTTTGTCGTCCGAGGAACATCTTTAACAGAACGCGGAAGGATATTTAGATAGTACAA-----
ACAGCACAGACTGTTCACTAATGATGTACGTA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GTACCTAGCATCATTCCACCATCTTCTCTTTCG
AGCTGGCAATCTGGTTTCTCATCTCTGCCACAAAGAAAAGGAAGCTTCACACTCTGTCTCCTACAACAAG--------GG
AAGAGCTCAAGCCGGGCGCCTACAAATA----------------------------------------------------
-----------------TTAGAGCAGCCAGAACTAATCCATGAAGCAAATATACGTTGATTGACCACC------------
---------------------------------------------GGTGCCATGGCTACTGCGTCCTTCGTCGCCTACCT
CGAGACGCCTAGAGAGCTCCGGGTGCTGGGGTTCCGGGCGCCGCCCCCGTCTCCGGTCACCGGCGTTCTATCCAACGGTG
GCTCTGGATCCCCTGAGTACGGCGAGTGCCCCGACGGCAACGAAGATGACGAGGTCGGCAGGTTCCTGCGCCGCTCCGCC
AGGGTCCCGGTGCTGCGGCTGCCGGAGAGGGACATCCCACG------GAAGAAGAAGAATGATAAGGCGGTGTGGGCTCC
CCCAGTCATCGACATGCGCCTGCTGGCCACGCCGGATACCGGTGGGCTAGTGGTGGAGACGCTGAGGTCGGCGGCCGTCG
CGTTTGGCTGCTTCCAGGTGGTTGGCCATGGGGTCAATGAGTGCTTGGTCTCTGCTGCGGCGGGGAGGGCGAGTTCGCCT
ACGCCGGAGGAGGCCGGTGGAGAAGATGACGAAGATGGTGAGGAGCTGTGGTGGTCACCGAGCGAAGGAGACCAGTTGAG
GTGCGAACTTGCCCATTTCATTGGAAGGCAACTAATCAAAGGACTCCATATGATGCTAACCCCTGGTTTTGCTGTGCCCA
GGAACGGAGCAGACGATCTGTTCACCCAGCTGGAGCAAACCGCAGCTAAACTCATGGACGCCCT---GCGGGACAGCGTT
GGCGCCACCGATTCCCTGGCCGGAGCTGACACGAACGGCTCGCTCCTCTGCATCCGCACGCACCACCGCCGGCAGTGCGA
TGGCGGAAGCGGCTCTGTTGGCCCTATCACTATCAGCCAGGACGCCATCCTCAGGATGCTGATCAAGAGCTCACGCCGCC
CACGGGCTCTCGCTCTCCACCTCTGCCCCGGCGCCTCCACGTTCCACGTCTTCTCTCGGCAGCGGGGACGGTCCAGGTTC
CGCCCCCTCGGCGGCGCCGTCGTGGTCACCGTCGGAGACCAGCTTCAGGTGACGCACCAATCTCTTGAGCGTGACCTTTT
TTGATT-CCGAAGCTTACCGGCCTTGCAAATGCACGATG---CATCATCACAATCATACATTGCCTTCTGGTTTACTTTC
TTCGCTCTCCACGTATGCAGGCATGGAGCAGTGGACTCTACAAGAGCGTGGCCGGGAAACCGGCTTACAGCGACGGCGAT
CTCCGAGCAGACCGCGGCTGTGATGTCGTC---TGGGCGGAGTACCTCCACTCCTGCTCTTCGGCTAGCATGGAGAGCGA
CGAGCCCCTGGACGCGGATGCCGGAAAGATCATTCAGTTGAATGTGCAGATCATGGTGGCAGCTTCCCTTGTACTCCTT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TACCACTTTCTCCTG
TCATGCTCGTGTACGATTTGGTCTTGAGAAGCTGCAGCAGGGCTTGTTGCCCTGACGATGCAGCTCGGTTTTTATTTCAA
GTTCAGCTCGGCTTGTGGAAATAGATTTGGTGTGTCAGTTTCGGCGAGAATAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TATTTAGTACGGGACCAA
AAGGATAGGGTAGGAAGCAAGAACCTCTTTGGGGCTCTCACACGACCACAGGACCAGACAGGAGCACAGAACATTTAAGT
CAGGTGTTTCGACATCTAAGTATCACCTTACACTGCAGTCAAGAGTCGTCCGCTACACAAAGGATTAACACGACTACAAA
ACATTTACTACTGTACACACTATTTT-CTATAATTAACAGCCACAGGCAGAAACATCTTCACAAGAACACGCTAGGCCGC
ATTCACAAC-TTGCCCACGAACACAAAACTACCACTGAGCTGGATCAAAAAGATGAGGCTAACTCGCTCTTCAGCCCACA
TGGCAAAAGATTTCTACGATACGGTACGCCCATAACAGACTGAAGCAAGGTAGAGATTCTTGGACCATTTCTCCTGCAAT
GACACAAAGCGGCACAATTTGTCACAACAATTTCAC-----AAGAATTACAGACGTTATCATTAAGTAGTGCAAGTGTGG
ACCTTCACATGCTGACTGGGGAAAGCAGATGTTCTCAGTGTCTCTTGAGTTTCATCAGTAGGCTTCCTTCTTGGTACACT
TAAGATCAATGCAGTCTGATCCCAAGTTGCAGCAACTGCTGTTATCCGGTAACCACTATCCCACCTCTTATGGACTCCCT
CACTAGGGTACAAGAAGTCCAGCTCAACAACCTGGAAAATAAATGCATGACAAACAAGGAATGCAAA-TAAACAAAATAA
CTGAACTTAGCTTGACAGTGTCGAAGTAAA--CAAACACCACCAGTGCAAATGATGA-TACCTGTTCCGAAAACCCT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-S---
---S-------------S-----------S-SSS--SS------------------------------------SSSSSS
SSS-----------------------------------------------------------------------------
-----------------------------S---------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S------------------------------------SSSSSSSSS--
--------S--------------------------------S--------S--------S---S-S--S---------S-
S-------------------------------------------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------S-----------------
----------------S-----S----------------------S---------------------S-SS-S-------
----------S-----------S---------------------------------------------------------
-S------------------------------------S-------------------------------S---------
--------------------------S----------SS-S----S----------------------------------
--------------------------------------SS----S-----------------------------------
-----------------------------------------------------------S--------------------
-------------------S-S--------------------------------------------------S-------
-------S----S---------------------------------------SS----S---S---S-------------
---------S---------S-S---------S----------------------------------S-------------
-SS------------------------------------------------S--------------------S---S---
-S--S---------------------------------------------------------------------------
-----------S-----------------------------------------------S----------------S---
---S--------S---S----S---S-------------SSS-------------S------------------------
------------S------------S------------------------------------------------------
-----------S--------S--S---------------------------S----------------------------
-----------------------------S------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
----------S-----------------------------S---------------------------------------
--------------S--------------------------S-----------S-SSSSS-SSS-SSSS-SSS-S--SSS
S-SS-SSSSS-SSSSSSSSSSSSSS-S-SS-S-SSSSS-S-SSSS-SSSS-SSSSS------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-----S------------
----------S---------------------------------------S-----------------------------
------------------SS-S-----------------------S----------------------------------
-----S---S--------------S----------------------------------S---S---S------------
--------------------------------------------------------------------------------
--------S----------------------------------------------------S------------------
--------------------------------------S--------S--------S-----------------------
--------------------------------------------------------SS----------------------
------------------------------------------------------------------------S---SS--
S---------------------S-------SS-------S---S---------S---S---------S---------
>forward_248
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GGGTATAACAGC
CTACCGCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_2300
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GTCTCTTGAGCGTGACCCTT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_392
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GTTGGCGGTAGCGATGTTTC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_2337
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GCCGATCTTACAAATGCACGC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_395
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GGCGGTAGCGATGTTTCCTA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_2532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ACCTGCTCTTCGGCTAGCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_443
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGACCCTATCGCCATGGAGT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_3561
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------AACTTGTTGCCCTGAAAATGCA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
