Multiple sequence alignment - TraesCS3A01G265800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G265800 chr3A 100.000 2561 0 0 1 2561 490339017 490336457 0.000000e+00 4730.0
1 TraesCS3A01G265800 chr3A 94.152 342 15 1 462 798 676222798 676222457 1.360000e-142 516.0
2 TraesCS3A01G265800 chr3D 88.854 1570 91 31 798 2325 368951792 368950265 0.000000e+00 1853.0
3 TraesCS3A01G265800 chr3D 93.529 340 22 0 463 802 18228434 18228095 8.180000e-140 507.0
4 TraesCS3A01G265800 chr3D 80.702 228 25 5 124 332 368952112 368951885 2.640000e-35 159.0
5 TraesCS3A01G265800 chr3D 92.000 75 5 1 389 462 368951858 368951784 1.250000e-18 104.0
6 TraesCS3A01G265800 chr3B 88.160 1571 91 32 800 2317 479986311 479984783 0.000000e+00 1783.0
7 TraesCS3A01G265800 chr3B 95.000 40 2 0 301 340 479987007 479986968 2.130000e-06 63.9
8 TraesCS3A01G265800 chr6A 94.279 437 21 4 1152 1584 144528859 144528423 0.000000e+00 665.0
9 TraesCS3A01G265800 chr6A 93.103 348 17 2 456 797 74349819 74349473 1.060000e-138 503.0
10 TraesCS3A01G265800 chr6D 95.433 416 18 1 1152 1566 116345403 116344988 0.000000e+00 662.0
11 TraesCS3A01G265800 chr4A 93.256 430 26 3 1152 1579 48275453 48275881 4.650000e-177 630.0
12 TraesCS3A01G265800 chr4A 94.175 412 23 1 1152 1562 675854943 675855354 6.020000e-176 627.0
13 TraesCS3A01G265800 chr1A 93.765 417 24 2 1152 1566 468599195 468598779 2.160000e-175 625.0
14 TraesCS3A01G265800 chr6B 93.750 416 25 1 1152 1566 206021047 206020632 7.780000e-175 623.0
15 TraesCS3A01G265800 chr4D 92.558 430 29 3 1152 1579 415583723 415583295 4.680000e-172 614.0
16 TraesCS3A01G265800 chr4D 93.731 335 21 0 463 797 382693805 382694139 1.060000e-138 503.0
17 TraesCS3A01G265800 chr4D 92.464 345 24 2 452 796 461263595 461263253 2.290000e-135 492.0
18 TraesCS3A01G265800 chr5D 93.731 335 21 0 463 797 447769396 447769062 1.060000e-138 503.0
19 TraesCS3A01G265800 chr5D 88.333 180 16 3 2370 2546 46064088 46064265 7.180000e-51 211.0
20 TraesCS3A01G265800 chr2D 93.731 335 21 0 463 797 596974607 596974273 1.060000e-138 503.0
21 TraesCS3A01G265800 chr7D 93.064 346 18 2 462 801 185551808 185552153 3.800000e-138 501.0
22 TraesCS3A01G265800 chr1D 93.713 334 21 0 464 797 218797647 218797314 3.800000e-138 501.0
23 TraesCS3A01G265800 chr7B 87.562 201 20 3 2364 2561 642502187 642501989 7.130000e-56 228.0
24 TraesCS3A01G265800 chr7B 86.567 201 21 4 2364 2561 670245137 670244940 1.540000e-52 217.0
25 TraesCS3A01G265800 chr2B 88.360 189 17 3 2364 2549 110537206 110537392 3.320000e-54 222.0
26 TraesCS3A01G265800 chr4B 86.598 194 23 1 2371 2561 192061850 192061657 7.180000e-51 211.0
27 TraesCS3A01G265800 chr5B 82.090 201 27 4 2370 2561 527296775 527296575 2.040000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G265800 chr3A 490336457 490339017 2560 True 4730.000000 4730 100.000000 1 2561 1 chr3A.!!$R1 2560
1 TraesCS3A01G265800 chr3D 368950265 368952112 1847 True 705.333333 1853 87.185333 124 2325 3 chr3D.!!$R2 2201
2 TraesCS3A01G265800 chr3B 479984783 479987007 2224 True 923.450000 1783 91.580000 301 2317 2 chr3B.!!$R1 2016

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
613 984 0.035534 ACGGGCATGTGCTTGACATA 60.036 50.0 4.84 0.0 43.96 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2340 2775 0.037232 ACAGGGACAAAGTAGCGCTC 60.037 55.0 16.34 5.88 0.0 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 6.875926 ACAAGAATGAATCATAAAAAGCGC 57.124 33.333 0.00 0.00 0.00 5.92
54 55 6.389091 ACAAGAATGAATCATAAAAAGCGCA 58.611 32.000 11.47 0.00 0.00 6.09
55 56 7.037438 ACAAGAATGAATCATAAAAAGCGCAT 58.963 30.769 11.47 0.00 0.00 4.73
56 57 8.190122 ACAAGAATGAATCATAAAAAGCGCATA 58.810 29.630 11.47 0.00 0.00 3.14
57 58 9.022915 CAAGAATGAATCATAAAAAGCGCATAA 57.977 29.630 11.47 0.00 0.00 1.90
58 59 9.585099 AAGAATGAATCATAAAAAGCGCATAAA 57.415 25.926 11.47 0.00 0.00 1.40
59 60 9.754382 AGAATGAATCATAAAAAGCGCATAAAT 57.246 25.926 11.47 0.00 0.00 1.40
62 63 8.923609 TGAATCATAAAAAGCGCATAAATTCA 57.076 26.923 11.47 10.53 0.00 2.57
63 64 9.022915 TGAATCATAAAAAGCGCATAAATTCAG 57.977 29.630 11.47 0.00 0.00 3.02
64 65 7.935338 ATCATAAAAAGCGCATAAATTCAGG 57.065 32.000 11.47 0.00 0.00 3.86
65 66 7.094508 TCATAAAAAGCGCATAAATTCAGGA 57.905 32.000 11.47 0.00 0.00 3.86
66 67 6.972328 TCATAAAAAGCGCATAAATTCAGGAC 59.028 34.615 11.47 0.00 0.00 3.85
67 68 4.782019 AAAAGCGCATAAATTCAGGACA 57.218 36.364 11.47 0.00 0.00 4.02
68 69 3.764885 AAGCGCATAAATTCAGGACAC 57.235 42.857 11.47 0.00 0.00 3.67
69 70 2.710377 AGCGCATAAATTCAGGACACA 58.290 42.857 11.47 0.00 0.00 3.72
70 71 3.081061 AGCGCATAAATTCAGGACACAA 58.919 40.909 11.47 0.00 0.00 3.33
71 72 3.505680 AGCGCATAAATTCAGGACACAAA 59.494 39.130 11.47 0.00 0.00 2.83
72 73 4.158394 AGCGCATAAATTCAGGACACAAAT 59.842 37.500 11.47 0.00 0.00 2.32
73 74 4.266029 GCGCATAAATTCAGGACACAAATG 59.734 41.667 0.30 0.00 0.00 2.32
74 75 5.639757 CGCATAAATTCAGGACACAAATGA 58.360 37.500 0.00 0.00 0.00 2.57
75 76 6.092092 CGCATAAATTCAGGACACAAATGAA 58.908 36.000 0.00 0.00 37.36 2.57
76 77 6.252015 CGCATAAATTCAGGACACAAATGAAG 59.748 38.462 0.00 0.00 36.47 3.02
77 78 6.035327 GCATAAATTCAGGACACAAATGAAGC 59.965 38.462 0.00 0.00 36.47 3.86
78 79 5.534207 AAATTCAGGACACAAATGAAGCA 57.466 34.783 0.00 0.00 36.47 3.91
79 80 5.534207 AATTCAGGACACAAATGAAGCAA 57.466 34.783 0.00 0.00 36.47 3.91
80 81 4.572985 TTCAGGACACAAATGAAGCAAG 57.427 40.909 0.00 0.00 0.00 4.01
81 82 3.819368 TCAGGACACAAATGAAGCAAGA 58.181 40.909 0.00 0.00 0.00 3.02
82 83 4.206375 TCAGGACACAAATGAAGCAAGAA 58.794 39.130 0.00 0.00 0.00 2.52
83 84 4.276678 TCAGGACACAAATGAAGCAAGAAG 59.723 41.667 0.00 0.00 0.00 2.85
84 85 4.037208 CAGGACACAAATGAAGCAAGAAGT 59.963 41.667 0.00 0.00 0.00 3.01
85 86 4.276926 AGGACACAAATGAAGCAAGAAGTC 59.723 41.667 0.00 0.00 0.00 3.01
86 87 4.214437 GACACAAATGAAGCAAGAAGTCG 58.786 43.478 0.00 0.00 0.00 4.18
87 88 2.975851 CACAAATGAAGCAAGAAGTCGC 59.024 45.455 0.00 0.00 0.00 5.19
88 89 2.618241 ACAAATGAAGCAAGAAGTCGCA 59.382 40.909 0.00 0.00 0.00 5.10
89 90 3.066621 ACAAATGAAGCAAGAAGTCGCAA 59.933 39.130 0.00 0.00 0.00 4.85
90 91 3.988379 AATGAAGCAAGAAGTCGCAAA 57.012 38.095 0.00 0.00 0.00 3.68
91 92 2.755836 TGAAGCAAGAAGTCGCAAAC 57.244 45.000 0.00 0.00 0.00 2.93
92 93 2.013400 TGAAGCAAGAAGTCGCAAACA 58.987 42.857 0.00 0.00 0.00 2.83
93 94 2.618241 TGAAGCAAGAAGTCGCAAACAT 59.382 40.909 0.00 0.00 0.00 2.71
94 95 3.812609 TGAAGCAAGAAGTCGCAAACATA 59.187 39.130 0.00 0.00 0.00 2.29
95 96 4.083855 TGAAGCAAGAAGTCGCAAACATAG 60.084 41.667 0.00 0.00 0.00 2.23
96 97 3.664107 AGCAAGAAGTCGCAAACATAGA 58.336 40.909 0.00 0.00 0.00 1.98
97 98 3.433615 AGCAAGAAGTCGCAAACATAGAC 59.566 43.478 0.00 0.00 35.30 2.59
98 99 3.186409 GCAAGAAGTCGCAAACATAGACA 59.814 43.478 0.00 0.00 37.36 3.41
99 100 4.142816 GCAAGAAGTCGCAAACATAGACAT 60.143 41.667 0.00 0.00 37.36 3.06
100 101 5.063438 GCAAGAAGTCGCAAACATAGACATA 59.937 40.000 0.00 0.00 37.36 2.29
101 102 6.470160 CAAGAAGTCGCAAACATAGACATAC 58.530 40.000 0.00 0.00 37.36 2.39
102 103 5.109903 AGAAGTCGCAAACATAGACATACC 58.890 41.667 0.00 0.00 37.36 2.73
103 104 3.793559 AGTCGCAAACATAGACATACCC 58.206 45.455 0.00 0.00 37.36 3.69
104 105 2.870411 GTCGCAAACATAGACATACCCC 59.130 50.000 0.00 0.00 35.19 4.95
105 106 2.502130 TCGCAAACATAGACATACCCCA 59.498 45.455 0.00 0.00 0.00 4.96
106 107 3.055021 TCGCAAACATAGACATACCCCAA 60.055 43.478 0.00 0.00 0.00 4.12
107 108 3.692101 CGCAAACATAGACATACCCCAAA 59.308 43.478 0.00 0.00 0.00 3.28
108 109 4.156922 CGCAAACATAGACATACCCCAAAA 59.843 41.667 0.00 0.00 0.00 2.44
109 110 5.163561 CGCAAACATAGACATACCCCAAAAT 60.164 40.000 0.00 0.00 0.00 1.82
110 111 6.627065 CGCAAACATAGACATACCCCAAAATT 60.627 38.462 0.00 0.00 0.00 1.82
111 112 7.415765 CGCAAACATAGACATACCCCAAAATTA 60.416 37.037 0.00 0.00 0.00 1.40
112 113 8.254508 GCAAACATAGACATACCCCAAAATTAA 58.745 33.333 0.00 0.00 0.00 1.40
113 114 9.801873 CAAACATAGACATACCCCAAAATTAAG 57.198 33.333 0.00 0.00 0.00 1.85
114 115 9.762381 AAACATAGACATACCCCAAAATTAAGA 57.238 29.630 0.00 0.00 0.00 2.10
115 116 8.747538 ACATAGACATACCCCAAAATTAAGAC 57.252 34.615 0.00 0.00 0.00 3.01
116 117 7.778382 ACATAGACATACCCCAAAATTAAGACC 59.222 37.037 0.00 0.00 0.00 3.85
117 118 6.147437 AGACATACCCCAAAATTAAGACCA 57.853 37.500 0.00 0.00 0.00 4.02
118 119 6.187682 AGACATACCCCAAAATTAAGACCAG 58.812 40.000 0.00 0.00 0.00 4.00
119 120 6.011981 AGACATACCCCAAAATTAAGACCAGA 60.012 38.462 0.00 0.00 0.00 3.86
120 121 6.187682 ACATACCCCAAAATTAAGACCAGAG 58.812 40.000 0.00 0.00 0.00 3.35
121 122 4.047627 ACCCCAAAATTAAGACCAGAGG 57.952 45.455 0.00 0.00 0.00 3.69
122 123 2.760650 CCCCAAAATTAAGACCAGAGGC 59.239 50.000 0.00 0.00 0.00 4.70
123 124 3.430453 CCCAAAATTAAGACCAGAGGCA 58.570 45.455 0.00 0.00 0.00 4.75
124 125 3.831911 CCCAAAATTAAGACCAGAGGCAA 59.168 43.478 0.00 0.00 0.00 4.52
125 126 4.283212 CCCAAAATTAAGACCAGAGGCAAA 59.717 41.667 0.00 0.00 0.00 3.68
126 127 5.221621 CCCAAAATTAAGACCAGAGGCAAAA 60.222 40.000 0.00 0.00 0.00 2.44
127 128 5.696270 CCAAAATTAAGACCAGAGGCAAAAC 59.304 40.000 0.00 0.00 0.00 2.43
128 129 6.279882 CAAAATTAAGACCAGAGGCAAAACA 58.720 36.000 0.00 0.00 0.00 2.83
129 130 6.670695 AAATTAAGACCAGAGGCAAAACAT 57.329 33.333 0.00 0.00 0.00 2.71
130 131 5.649782 ATTAAGACCAGAGGCAAAACATG 57.350 39.130 0.00 0.00 0.00 3.21
151 152 8.066612 ACATGTTATATGGTTTGAAGGGAAAG 57.933 34.615 0.00 0.00 0.00 2.62
153 154 7.461182 TGTTATATGGTTTGAAGGGAAAGTG 57.539 36.000 0.00 0.00 0.00 3.16
156 157 9.016438 GTTATATGGTTTGAAGGGAAAGTGTAA 57.984 33.333 0.00 0.00 0.00 2.41
170 171 6.443792 GGAAAGTGTAACCCAACATACAAAG 58.556 40.000 0.00 0.00 37.80 2.77
171 172 6.040054 GGAAAGTGTAACCCAACATACAAAGT 59.960 38.462 0.00 0.00 37.80 2.66
172 173 7.412853 AAAGTGTAACCCAACATACAAAGTT 57.587 32.000 0.00 0.00 37.80 2.66
173 174 8.522542 AAAGTGTAACCCAACATACAAAGTTA 57.477 30.769 0.00 0.00 37.80 2.24
204 206 7.408756 AGGCAAAAAGATATAGTCATTGCAA 57.591 32.000 0.00 0.00 41.22 4.08
214 216 2.412870 AGTCATTGCAATCGAACGTCA 58.587 42.857 9.53 0.00 0.00 4.35
215 217 2.805671 AGTCATTGCAATCGAACGTCAA 59.194 40.909 9.53 0.00 0.00 3.18
222 224 5.599359 TGCAATCGAACGTCAAGAAATTA 57.401 34.783 0.00 0.00 0.00 1.40
231 233 6.955963 CGAACGTCAAGAAATTAGAATGAAGG 59.044 38.462 0.00 0.00 0.00 3.46
234 236 6.149474 ACGTCAAGAAATTAGAATGAAGGTGG 59.851 38.462 0.00 0.00 0.00 4.61
239 241 9.415544 CAAGAAATTAGAATGAAGGTGGAAAAG 57.584 33.333 0.00 0.00 0.00 2.27
243 245 4.453480 AGAATGAAGGTGGAAAAGACCA 57.547 40.909 0.00 0.00 35.76 4.02
257 276 9.626045 GTGGAAAAGACCAACTAAATAATTCAG 57.374 33.333 0.00 0.00 41.87 3.02
274 293 4.574674 TTCAGCAGGAATCACAATAGGT 57.425 40.909 0.00 0.00 0.00 3.08
340 360 6.264970 AGTCGTATGGAAAATACTACTCCCTC 59.735 42.308 0.00 0.00 28.33 4.30
341 361 6.264970 GTCGTATGGAAAATACTACTCCCTCT 59.735 42.308 0.00 0.00 0.00 3.69
342 362 7.446625 GTCGTATGGAAAATACTACTCCCTCTA 59.553 40.741 0.00 0.00 0.00 2.43
343 363 7.446625 TCGTATGGAAAATACTACTCCCTCTAC 59.553 40.741 0.00 0.00 0.00 2.59
344 364 7.230108 CGTATGGAAAATACTACTCCCTCTACA 59.770 40.741 0.00 0.00 0.00 2.74
347 367 4.915158 AAATACTACTCCCTCTACACGC 57.085 45.455 0.00 0.00 0.00 5.34
380 469 6.253946 ACTACTCCCTTGGATGGAAATAAG 57.746 41.667 0.00 0.00 0.00 1.73
386 475 4.272489 CCTTGGATGGAAATAAGTGCTGA 58.728 43.478 0.00 0.00 0.00 4.26
387 476 4.706476 CCTTGGATGGAAATAAGTGCTGAA 59.294 41.667 0.00 0.00 0.00 3.02
459 830 1.357258 CTAGCCAAGCACTGCTCACG 61.357 60.000 3.40 0.00 38.25 4.35
460 831 2.786539 TAGCCAAGCACTGCTCACGG 62.787 60.000 3.40 6.85 38.25 4.94
461 832 3.052082 CCAAGCACTGCTCACGGG 61.052 66.667 3.40 0.54 38.25 5.28
462 833 2.281070 CAAGCACTGCTCACGGGT 60.281 61.111 3.40 0.00 38.25 5.28
463 834 1.005037 CAAGCACTGCTCACGGGTA 60.005 57.895 3.40 0.00 38.25 3.69
464 835 1.016130 CAAGCACTGCTCACGGGTAG 61.016 60.000 3.40 0.00 38.25 3.18
465 836 1.472662 AAGCACTGCTCACGGGTAGT 61.473 55.000 3.40 0.00 38.25 2.73
466 837 1.446272 GCACTGCTCACGGGTAGTC 60.446 63.158 0.00 0.00 30.12 2.59
468 839 1.076906 ACTGCTCACGGGTAGTCCT 59.923 57.895 0.00 0.00 0.00 3.85
469 840 1.251527 ACTGCTCACGGGTAGTCCTG 61.252 60.000 0.00 0.00 45.17 3.86
470 841 1.949847 CTGCTCACGGGTAGTCCTGG 61.950 65.000 0.00 0.00 44.02 4.45
471 842 2.893398 CTCACGGGTAGTCCTGGC 59.107 66.667 0.00 0.00 44.02 4.85
473 844 3.000819 CACGGGTAGTCCTGGCCA 61.001 66.667 4.71 4.71 44.02 5.36
474 845 2.040606 ACGGGTAGTCCTGGCCAT 59.959 61.111 5.51 0.00 44.02 4.40
475 846 2.064581 ACGGGTAGTCCTGGCCATC 61.065 63.158 5.51 0.00 44.02 3.51
476 847 1.762460 CGGGTAGTCCTGGCCATCT 60.762 63.158 5.51 8.22 36.50 2.90
478 849 0.691078 GGGTAGTCCTGGCCATCTCA 60.691 60.000 5.51 0.00 0.00 3.27
515 886 4.342086 ACCCAGGCCCGACCCTAA 62.342 66.667 0.00 0.00 40.58 2.69
516 887 3.012722 CCCAGGCCCGACCCTAAA 61.013 66.667 0.00 0.00 40.58 1.85
517 888 2.608550 CCCAGGCCCGACCCTAAAA 61.609 63.158 0.00 0.00 40.58 1.52
518 889 1.613061 CCAGGCCCGACCCTAAAAT 59.387 57.895 0.00 0.00 40.58 1.82
519 890 0.465642 CCAGGCCCGACCCTAAAATC 60.466 60.000 0.00 0.00 40.58 2.17
520 891 0.465642 CAGGCCCGACCCTAAAATCC 60.466 60.000 0.00 0.00 40.58 3.01
523 894 0.465642 GCCCGACCCTAAAATCCAGG 60.466 60.000 0.00 0.00 0.00 4.45
524 895 1.209621 CCCGACCCTAAAATCCAGGA 58.790 55.000 0.00 0.00 34.91 3.86
525 896 1.134189 CCCGACCCTAAAATCCAGGAC 60.134 57.143 0.00 0.00 34.91 3.85
526 897 1.134189 CCGACCCTAAAATCCAGGACC 60.134 57.143 0.00 0.00 34.91 4.46
527 898 1.838077 CGACCCTAAAATCCAGGACCT 59.162 52.381 0.00 0.00 34.91 3.85
528 899 3.036091 CGACCCTAAAATCCAGGACCTA 58.964 50.000 0.00 0.00 34.91 3.08
531 902 2.106684 CCCTAAAATCCAGGACCTAGGC 59.893 54.545 9.30 1.17 34.91 3.93
532 903 2.106684 CCTAAAATCCAGGACCTAGGCC 59.893 54.545 9.30 11.45 34.91 5.19
533 904 0.927029 AAAATCCAGGACCTAGGCCC 59.073 55.000 9.30 7.55 0.00 5.80
535 906 2.252012 AATCCAGGACCTAGGCCCGA 62.252 60.000 9.30 9.90 0.00 5.14
536 907 2.037304 ATCCAGGACCTAGGCCCGAT 62.037 60.000 9.30 11.62 0.00 4.18
538 909 1.457643 CAGGACCTAGGCCCGATGA 60.458 63.158 9.30 0.00 0.00 2.92
539 910 1.152440 AGGACCTAGGCCCGATGAG 60.152 63.158 9.30 0.00 0.00 2.90
540 911 1.457831 GGACCTAGGCCCGATGAGT 60.458 63.158 9.30 0.00 0.00 3.41
541 912 1.049289 GGACCTAGGCCCGATGAGTT 61.049 60.000 9.30 0.00 0.00 3.01
542 913 0.831307 GACCTAGGCCCGATGAGTTT 59.169 55.000 9.30 0.00 0.00 2.66
544 915 0.541863 CCTAGGCCCGATGAGTTTGT 59.458 55.000 0.00 0.00 0.00 2.83
545 916 1.473434 CCTAGGCCCGATGAGTTTGTC 60.473 57.143 0.00 0.00 0.00 3.18
546 917 0.539986 TAGGCCCGATGAGTTTGTCC 59.460 55.000 0.00 0.00 0.00 4.02
547 918 1.002624 GGCCCGATGAGTTTGTCCA 60.003 57.895 0.00 0.00 0.00 4.02
548 919 0.394352 GGCCCGATGAGTTTGTCCAT 60.394 55.000 0.00 0.00 0.00 3.41
549 920 0.734889 GCCCGATGAGTTTGTCCATG 59.265 55.000 0.00 0.00 0.00 3.66
550 921 1.382522 CCCGATGAGTTTGTCCATGG 58.617 55.000 4.97 4.97 0.00 3.66
551 922 1.382522 CCGATGAGTTTGTCCATGGG 58.617 55.000 13.02 0.00 33.49 4.00
552 923 0.734889 CGATGAGTTTGTCCATGGGC 59.265 55.000 10.20 10.20 0.00 5.36
553 924 1.106285 GATGAGTTTGTCCATGGGCC 58.894 55.000 15.27 4.53 0.00 5.80
554 925 0.680921 ATGAGTTTGTCCATGGGCCG 60.681 55.000 15.27 0.00 0.00 6.13
555 926 2.035626 AGTTTGTCCATGGGCCGG 59.964 61.111 15.27 0.00 0.00 6.13
575 946 0.600057 GCTTGGGCCTGAGTTTTGAG 59.400 55.000 4.53 0.00 0.00 3.02
576 947 0.600057 CTTGGGCCTGAGTTTTGAGC 59.400 55.000 4.53 0.00 0.00 4.26
577 948 0.827507 TTGGGCCTGAGTTTTGAGCC 60.828 55.000 4.53 0.00 43.09 4.70
578 949 3.686760 GGCCTGAGTTTTGAGCCC 58.313 61.111 0.00 0.00 37.66 5.19
579 950 1.228552 GGCCTGAGTTTTGAGCCCA 60.229 57.895 0.00 0.00 37.66 5.36
582 953 1.887956 GCCTGAGTTTTGAGCCCATCA 60.888 52.381 0.00 0.00 35.62 3.07
583 954 2.517959 CCTGAGTTTTGAGCCCATCAA 58.482 47.619 0.00 0.00 46.31 2.57
593 964 2.043652 CCCATCAACAGGGCCTGG 60.044 66.667 35.34 19.93 39.96 4.45
594 965 2.615465 CCCATCAACAGGGCCTGGA 61.615 63.158 35.34 24.38 39.96 3.86
597 968 2.971598 ATCAACAGGGCCTGGACGG 61.972 63.158 35.34 21.22 35.51 4.79
598 969 4.722700 CAACAGGGCCTGGACGGG 62.723 72.222 35.34 16.57 35.51 5.28
607 978 2.360350 CTGGACGGGCATGTGCTT 60.360 61.111 4.84 0.00 41.70 3.91
608 979 2.672651 TGGACGGGCATGTGCTTG 60.673 61.111 4.84 0.63 41.70 4.01
609 980 2.359850 GGACGGGCATGTGCTTGA 60.360 61.111 4.84 0.00 41.70 3.02
610 981 2.690778 GGACGGGCATGTGCTTGAC 61.691 63.158 4.84 0.00 41.70 3.18
611 982 1.965930 GACGGGCATGTGCTTGACA 60.966 57.895 4.84 0.00 41.70 3.58
612 983 1.303561 ACGGGCATGTGCTTGACAT 60.304 52.632 4.84 0.00 46.98 3.06
613 984 0.035534 ACGGGCATGTGCTTGACATA 60.036 50.000 4.84 0.00 43.96 2.29
615 986 1.677576 CGGGCATGTGCTTGACATATT 59.322 47.619 4.84 0.00 43.96 1.28
616 987 2.542205 CGGGCATGTGCTTGACATATTG 60.542 50.000 4.84 0.00 43.96 1.90
617 988 2.223876 GGGCATGTGCTTGACATATTGG 60.224 50.000 4.84 0.00 43.96 3.16
618 989 2.466846 GCATGTGCTTGACATATTGGC 58.533 47.619 0.00 0.00 43.96 4.52
619 990 2.159212 GCATGTGCTTGACATATTGGCA 60.159 45.455 0.00 0.00 43.96 4.92
620 991 3.491964 GCATGTGCTTGACATATTGGCAT 60.492 43.478 0.00 0.00 43.96 4.40
624 995 6.278172 TGTGCTTGACATATTGGCATTTTA 57.722 33.333 0.00 0.00 33.90 1.52
625 996 6.695429 TGTGCTTGACATATTGGCATTTTAA 58.305 32.000 0.00 0.00 33.90 1.52
628 999 6.154192 TGCTTGACATATTGGCATTTTAAGGA 59.846 34.615 0.00 0.00 33.90 3.36
629 1000 7.041107 GCTTGACATATTGGCATTTTAAGGAA 58.959 34.615 0.00 0.00 33.90 3.36
630 1001 7.223387 GCTTGACATATTGGCATTTTAAGGAAG 59.777 37.037 0.00 0.00 33.90 3.46
631 1002 7.953005 TGACATATTGGCATTTTAAGGAAGA 57.047 32.000 0.00 0.00 24.43 2.87
632 1003 7.999679 TGACATATTGGCATTTTAAGGAAGAG 58.000 34.615 0.00 0.00 24.43 2.85
636 1007 1.757118 GGCATTTTAAGGAAGAGGCCC 59.243 52.381 0.00 0.00 34.17 5.80
637 1008 1.405463 GCATTTTAAGGAAGAGGCCCG 59.595 52.381 0.00 0.00 0.00 6.13
655 1026 4.822628 GCCCACAGCCCTAAGCCC 62.823 72.222 0.00 0.00 45.47 5.19
656 1027 3.017581 CCCACAGCCCTAAGCCCT 61.018 66.667 0.00 0.00 45.47 5.19
657 1028 1.692749 CCCACAGCCCTAAGCCCTA 60.693 63.158 0.00 0.00 45.47 3.53
658 1029 1.279025 CCCACAGCCCTAAGCCCTAA 61.279 60.000 0.00 0.00 45.47 2.69
659 1030 0.181350 CCACAGCCCTAAGCCCTAAG 59.819 60.000 0.00 0.00 45.47 2.18
660 1031 0.181350 CACAGCCCTAAGCCCTAAGG 59.819 60.000 0.00 0.00 45.47 2.69
670 1041 2.604912 AGCCCTAAGGGTTTTTCAGG 57.395 50.000 0.00 0.00 46.51 3.86
671 1042 1.077169 AGCCCTAAGGGTTTTTCAGGG 59.923 52.381 0.00 0.37 46.51 4.45
672 1043 1.557099 CCCTAAGGGTTTTTCAGGGC 58.443 55.000 0.00 0.00 39.62 5.19
673 1044 1.077169 CCCTAAGGGTTTTTCAGGGCT 59.923 52.381 0.00 0.00 39.62 5.19
674 1045 2.492753 CCCTAAGGGTTTTTCAGGGCTT 60.493 50.000 0.00 0.00 39.62 4.35
675 1046 3.239449 CCTAAGGGTTTTTCAGGGCTTT 58.761 45.455 0.00 0.00 0.00 3.51
676 1047 3.646162 CCTAAGGGTTTTTCAGGGCTTTT 59.354 43.478 0.00 0.00 0.00 2.27
677 1048 4.102524 CCTAAGGGTTTTTCAGGGCTTTTT 59.897 41.667 0.00 0.00 0.00 1.94
678 1049 5.305902 CCTAAGGGTTTTTCAGGGCTTTTTA 59.694 40.000 0.00 0.00 0.00 1.52
679 1050 4.682778 AGGGTTTTTCAGGGCTTTTTAC 57.317 40.909 0.00 0.00 0.00 2.01
680 1051 3.069016 AGGGTTTTTCAGGGCTTTTTACG 59.931 43.478 0.00 0.00 0.00 3.18
681 1052 3.068448 GGGTTTTTCAGGGCTTTTTACGA 59.932 43.478 0.00 0.00 0.00 3.43
682 1053 4.295870 GGTTTTTCAGGGCTTTTTACGAG 58.704 43.478 0.00 0.00 0.00 4.18
683 1054 4.037089 GGTTTTTCAGGGCTTTTTACGAGA 59.963 41.667 0.00 0.00 0.00 4.04
684 1055 5.278808 GGTTTTTCAGGGCTTTTTACGAGAT 60.279 40.000 0.00 0.00 0.00 2.75
685 1056 5.371115 TTTTCAGGGCTTTTTACGAGATG 57.629 39.130 0.00 0.00 0.00 2.90
686 1057 2.985896 TCAGGGCTTTTTACGAGATGG 58.014 47.619 0.00 0.00 0.00 3.51
687 1058 2.017049 CAGGGCTTTTTACGAGATGGG 58.983 52.381 0.00 0.00 0.00 4.00
688 1059 0.738975 GGGCTTTTTACGAGATGGGC 59.261 55.000 0.00 0.00 0.00 5.36
689 1060 0.738975 GGCTTTTTACGAGATGGGCC 59.261 55.000 0.00 0.00 0.00 5.80
690 1061 0.377203 GCTTTTTACGAGATGGGCCG 59.623 55.000 0.00 0.00 0.00 6.13
691 1062 1.014352 CTTTTTACGAGATGGGCCGG 58.986 55.000 0.00 0.00 0.00 6.13
692 1063 0.393267 TTTTTACGAGATGGGCCGGG 60.393 55.000 2.18 0.00 0.00 5.73
693 1064 2.879813 TTTTACGAGATGGGCCGGGC 62.880 60.000 22.00 22.00 0.00 6.13
694 1065 4.853142 TACGAGATGGGCCGGGCT 62.853 66.667 28.80 9.11 0.00 5.19
697 1068 4.883354 GAGATGGGCCGGGCTTGG 62.883 72.222 28.80 0.00 0.00 3.61
705 1076 2.600173 CCGGGCTTGGGCTTGAAA 60.600 61.111 0.00 0.00 38.73 2.69
706 1077 2.206536 CCGGGCTTGGGCTTGAAAA 61.207 57.895 0.00 0.00 38.73 2.29
719 1090 2.017049 CTTGAAAAGTAGGCCCGATGG 58.983 52.381 0.00 0.00 39.70 3.51
720 1091 0.988832 TGAAAAGTAGGCCCGATGGT 59.011 50.000 0.00 0.00 0.00 3.55
721 1092 2.189676 TGAAAAGTAGGCCCGATGGTA 58.810 47.619 0.00 0.00 0.00 3.25
722 1093 2.572556 TGAAAAGTAGGCCCGATGGTAA 59.427 45.455 0.00 0.00 0.00 2.85
723 1094 3.203716 GAAAAGTAGGCCCGATGGTAAG 58.796 50.000 0.00 0.00 0.00 2.34
724 1095 1.129058 AAGTAGGCCCGATGGTAAGG 58.871 55.000 0.00 0.00 0.00 2.69
725 1096 1.070957 GTAGGCCCGATGGTAAGGC 59.929 63.158 0.00 0.00 46.37 4.35
728 1099 2.203209 GCCCGATGGTAAGGCCTG 60.203 66.667 5.69 0.00 41.00 4.85
729 1100 2.510906 CCCGATGGTAAGGCCTGG 59.489 66.667 5.69 0.00 38.35 4.45
730 1101 2.510906 CCGATGGTAAGGCCTGGG 59.489 66.667 5.69 0.00 38.35 4.45
731 1102 2.070039 CCGATGGTAAGGCCTGGGA 61.070 63.158 5.69 0.00 38.35 4.37
732 1103 1.447643 CGATGGTAAGGCCTGGGAG 59.552 63.158 5.69 0.00 38.35 4.30
733 1104 1.839894 GATGGTAAGGCCTGGGAGG 59.160 63.158 5.69 0.00 38.80 4.30
734 1105 1.697754 ATGGTAAGGCCTGGGAGGG 60.698 63.158 5.69 0.00 35.37 4.30
751 1122 3.686760 GCCTGGGCCTCAGTTTTC 58.313 61.111 16.96 3.57 41.83 2.29
752 1123 1.075659 GCCTGGGCCTCAGTTTTCT 59.924 57.895 16.96 0.00 41.83 2.52
753 1124 1.246737 GCCTGGGCCTCAGTTTTCTG 61.247 60.000 16.96 5.05 41.83 3.02
754 1125 1.246737 CCTGGGCCTCAGTTTTCTGC 61.247 60.000 16.96 0.00 46.59 4.26
755 1126 1.228552 TGGGCCTCAGTTTTCTGCC 60.229 57.895 4.53 0.00 46.59 4.85
756 1127 1.228552 GGGCCTCAGTTTTCTGCCA 60.229 57.895 0.84 0.00 46.59 4.92
757 1128 0.613012 GGGCCTCAGTTTTCTGCCAT 60.613 55.000 0.84 0.00 46.59 4.40
758 1129 0.529378 GGCCTCAGTTTTCTGCCATG 59.471 55.000 0.00 0.00 46.59 3.66
759 1130 0.529378 GCCTCAGTTTTCTGCCATGG 59.471 55.000 7.63 7.63 46.59 3.66
760 1131 1.180029 CCTCAGTTTTCTGCCATGGG 58.820 55.000 15.13 0.00 46.59 4.00
850 1221 0.662619 CACGCCAAGAGAGCAAACAA 59.337 50.000 0.00 0.00 0.00 2.83
855 1226 2.035066 GCCAAGAGAGCAAACAACACAT 59.965 45.455 0.00 0.00 0.00 3.21
917 1289 3.487202 CATCGCCACCGTCCAACG 61.487 66.667 0.00 0.00 42.11 4.10
1003 1375 4.158209 CCCAAAATCCCCAAAATTTCATGC 59.842 41.667 0.00 0.00 0.00 4.06
1006 1378 6.829811 CCAAAATCCCCAAAATTTCATGCTAT 59.170 34.615 0.00 0.00 0.00 2.97
1011 1383 2.540931 CCAAAATTTCATGCTATGCGCC 59.459 45.455 4.18 0.00 38.05 6.53
1012 1384 2.124011 AAATTTCATGCTATGCGCCG 57.876 45.000 4.18 0.00 38.05 6.46
1013 1385 0.318107 AATTTCATGCTATGCGCCGC 60.318 50.000 4.18 0.00 38.05 6.53
1014 1386 2.448153 ATTTCATGCTATGCGCCGCG 62.448 55.000 8.83 8.83 38.05 6.46
1107 1485 0.734253 CCGAACAACTCTCTCGCCAG 60.734 60.000 0.00 0.00 0.00 4.85
1317 1697 3.733236 CGAGATCCGCAAGTACCAA 57.267 52.632 0.00 0.00 0.00 3.67
1326 1706 1.398451 CGCAAGTACCAAAAGAGCACG 60.398 52.381 0.00 0.00 0.00 5.34
1493 1873 4.457496 CCTCTGCGCCATCCACGT 62.457 66.667 4.18 0.00 0.00 4.49
1497 1877 2.281139 TGCGCCATCCACGTCAAA 60.281 55.556 4.18 0.00 0.00 2.69
1582 1962 2.186384 CCTCTCGCTCCTGCTTGG 59.814 66.667 0.00 0.00 36.97 3.61
1585 1965 2.125350 CTCGCTCCTGCTTGGTCC 60.125 66.667 0.00 0.00 36.97 4.46
1589 1969 1.676967 GCTCCTGCTTGGTCCCTTG 60.677 63.158 0.00 0.00 37.07 3.61
1591 1971 0.035630 CTCCTGCTTGGTCCCTTGAG 60.036 60.000 0.00 0.00 37.07 3.02
1652 2032 8.922931 TTTAGTATGTGCAATGGATGTATCAT 57.077 30.769 0.00 0.00 0.00 2.45
1653 2033 6.812879 AGTATGTGCAATGGATGTATCATG 57.187 37.500 0.00 0.00 0.00 3.07
1778 2158 2.880890 ACTGAACAATCTGCACCTGAAC 59.119 45.455 0.00 0.00 0.00 3.18
1779 2159 2.880268 CTGAACAATCTGCACCTGAACA 59.120 45.455 0.00 0.00 0.00 3.18
1780 2160 3.286353 TGAACAATCTGCACCTGAACAA 58.714 40.909 0.00 0.00 0.00 2.83
1781 2161 3.890756 TGAACAATCTGCACCTGAACAAT 59.109 39.130 0.00 0.00 0.00 2.71
1785 2166 4.697352 ACAATCTGCACCTGAACAATAGTC 59.303 41.667 0.00 0.00 0.00 2.59
1789 2170 2.232696 TGCACCTGAACAATAGTCGCTA 59.767 45.455 0.00 0.00 0.00 4.26
1824 2208 6.599445 CATAAACAGGAATCCTCCAATCTCT 58.401 40.000 0.00 0.00 45.24 3.10
1830 2214 5.488203 CAGGAATCCTCCAATCTCTATCCAT 59.512 44.000 0.00 0.00 45.24 3.41
1836 2220 7.295999 TCCTCCAATCTCTATCCATCTAGAT 57.704 40.000 0.00 0.00 0.00 1.98
1881 2267 0.864797 CGTAAGCCGACGGTAGAAGC 60.865 60.000 16.73 0.00 39.19 3.86
1903 2289 0.975040 CCCCAAATTCCATCCGGCAA 60.975 55.000 0.00 0.00 0.00 4.52
2060 2446 4.035102 GCTGGAACCCCGGAGCTT 62.035 66.667 0.73 0.00 41.53 3.74
2111 2507 2.414824 GGTCGCGATATTAGCTCCAGAG 60.415 54.545 14.06 0.00 0.00 3.35
2122 2527 2.692024 AGCTCCAGAGATGATGGATGT 58.308 47.619 0.00 0.00 45.64 3.06
2184 2612 2.044353 AGTGGTAAATTGGCCCCATCTT 59.956 45.455 0.00 0.00 0.00 2.40
2202 2631 5.068460 CCATCTTGTTTGGTTCAAGGTACAA 59.932 40.000 0.00 0.00 41.52 2.41
2211 2640 4.160439 TGGTTCAAGGTACAAATTGTTGCA 59.840 37.500 3.17 0.00 38.39 4.08
2286 2721 5.584551 AAACTCCCCTACATATGAATCCC 57.415 43.478 10.38 0.00 0.00 3.85
2289 2724 4.140447 ACTCCCCTACATATGAATCCCTGA 60.140 45.833 10.38 0.00 0.00 3.86
2304 2739 2.698855 CCTGAAGGGTCGTCATTGAT 57.301 50.000 0.00 0.00 0.00 2.57
2307 2742 4.513442 CCTGAAGGGTCGTCATTGATTTA 58.487 43.478 0.00 0.00 0.00 1.40
2329 2764 8.914328 TTTAACTAGTTTTGGAAAGGAAAACG 57.086 30.769 14.49 0.00 44.51 3.60
2330 2765 4.928601 ACTAGTTTTGGAAAGGAAAACGC 58.071 39.130 0.00 0.00 44.51 4.84
2331 2766 4.643334 ACTAGTTTTGGAAAGGAAAACGCT 59.357 37.500 0.00 0.00 44.51 5.07
2332 2767 4.465632 AGTTTTGGAAAGGAAAACGCTT 57.534 36.364 0.00 0.00 44.51 4.68
2333 2768 5.585820 AGTTTTGGAAAGGAAAACGCTTA 57.414 34.783 0.00 0.00 44.51 3.09
2334 2769 5.588240 AGTTTTGGAAAGGAAAACGCTTAG 58.412 37.500 0.00 0.00 44.51 2.18
2335 2770 5.358725 AGTTTTGGAAAGGAAAACGCTTAGA 59.641 36.000 0.00 0.00 44.51 2.10
2336 2771 5.432885 TTTGGAAAGGAAAACGCTTAGAG 57.567 39.130 0.00 0.00 0.00 2.43
2337 2772 2.812011 TGGAAAGGAAAACGCTTAGAGC 59.188 45.455 0.00 0.00 38.02 4.09
2338 2773 2.161808 GGAAAGGAAAACGCTTAGAGCC 59.838 50.000 0.00 0.00 38.18 4.70
2339 2774 1.439679 AAGGAAAACGCTTAGAGCCG 58.560 50.000 0.00 0.00 38.18 5.52
2340 2775 0.391263 AGGAAAACGCTTAGAGCCGG 60.391 55.000 0.00 0.00 38.18 6.13
2341 2776 0.390735 GGAAAACGCTTAGAGCCGGA 60.391 55.000 5.05 0.00 38.18 5.14
2342 2777 1.000145 GAAAACGCTTAGAGCCGGAG 59.000 55.000 5.05 0.00 38.18 4.63
2343 2778 1.019805 AAAACGCTTAGAGCCGGAGC 61.020 55.000 5.05 3.19 38.18 4.70
2351 2786 2.184579 GAGCCGGAGCGCTACTTT 59.815 61.111 19.46 2.13 46.67 2.66
2352 2787 2.125512 AGCCGGAGCGCTACTTTG 60.126 61.111 19.46 7.21 46.67 2.77
2353 2788 2.434359 GCCGGAGCGCTACTTTGT 60.434 61.111 19.46 0.00 0.00 2.83
2354 2789 2.453638 GCCGGAGCGCTACTTTGTC 61.454 63.158 19.46 0.00 0.00 3.18
2355 2790 1.810030 CCGGAGCGCTACTTTGTCC 60.810 63.158 19.46 8.89 0.00 4.02
2356 2791 1.810030 CGGAGCGCTACTTTGTCCC 60.810 63.158 19.46 7.81 0.00 4.46
2357 2792 1.597461 GGAGCGCTACTTTGTCCCT 59.403 57.895 13.91 0.00 0.00 4.20
2358 2793 0.741221 GGAGCGCTACTTTGTCCCTG 60.741 60.000 13.91 0.00 0.00 4.45
2359 2794 0.037232 GAGCGCTACTTTGTCCCTGT 60.037 55.000 11.50 0.00 0.00 4.00
2360 2795 0.396811 AGCGCTACTTTGTCCCTGTT 59.603 50.000 8.99 0.00 0.00 3.16
2361 2796 1.202770 AGCGCTACTTTGTCCCTGTTT 60.203 47.619 8.99 0.00 0.00 2.83
2362 2797 1.607148 GCGCTACTTTGTCCCTGTTTT 59.393 47.619 0.00 0.00 0.00 2.43
2363 2798 2.604614 GCGCTACTTTGTCCCTGTTTTG 60.605 50.000 0.00 0.00 0.00 2.44
2364 2799 2.604614 CGCTACTTTGTCCCTGTTTTGC 60.605 50.000 0.00 0.00 0.00 3.68
2365 2800 2.604614 GCTACTTTGTCCCTGTTTTGCG 60.605 50.000 0.00 0.00 0.00 4.85
2366 2801 0.102300 ACTTTGTCCCTGTTTTGCGC 59.898 50.000 0.00 0.00 0.00 6.09
2367 2802 0.597377 CTTTGTCCCTGTTTTGCGCC 60.597 55.000 4.18 0.00 0.00 6.53
2368 2803 2.343163 TTTGTCCCTGTTTTGCGCCG 62.343 55.000 4.18 0.00 0.00 6.46
2369 2804 4.038080 GTCCCTGTTTTGCGCCGG 62.038 66.667 4.18 0.00 0.00 6.13
2385 2820 4.496336 GGCGCCATGCTTCTCCCT 62.496 66.667 24.80 0.00 45.43 4.20
2386 2821 2.899339 GCGCCATGCTTCTCCCTC 60.899 66.667 0.00 0.00 41.73 4.30
2387 2822 2.203126 CGCCATGCTTCTCCCTCC 60.203 66.667 0.00 0.00 0.00 4.30
2388 2823 2.739996 CGCCATGCTTCTCCCTCCT 61.740 63.158 0.00 0.00 0.00 3.69
2389 2824 1.148048 GCCATGCTTCTCCCTCCTC 59.852 63.158 0.00 0.00 0.00 3.71
2390 2825 1.445095 CCATGCTTCTCCCTCCTCG 59.555 63.158 0.00 0.00 0.00 4.63
2391 2826 1.227497 CATGCTTCTCCCTCCTCGC 60.227 63.158 0.00 0.00 0.00 5.03
2392 2827 1.687146 ATGCTTCTCCCTCCTCGCA 60.687 57.895 0.00 0.00 0.00 5.10
2393 2828 1.684386 ATGCTTCTCCCTCCTCGCAG 61.684 60.000 0.00 0.00 0.00 5.18
2394 2829 2.498726 CTTCTCCCTCCTCGCAGC 59.501 66.667 0.00 0.00 0.00 5.25
2395 2830 2.283894 TTCTCCCTCCTCGCAGCA 60.284 61.111 0.00 0.00 0.00 4.41
2396 2831 1.892819 CTTCTCCCTCCTCGCAGCAA 61.893 60.000 0.00 0.00 0.00 3.91
2397 2832 1.480212 TTCTCCCTCCTCGCAGCAAA 61.480 55.000 0.00 0.00 0.00 3.68
2398 2833 1.743252 CTCCCTCCTCGCAGCAAAC 60.743 63.158 0.00 0.00 0.00 2.93
2399 2834 2.747855 CCCTCCTCGCAGCAAACC 60.748 66.667 0.00 0.00 0.00 3.27
2400 2835 2.032528 CCTCCTCGCAGCAAACCA 59.967 61.111 0.00 0.00 0.00 3.67
2401 2836 2.328099 CCTCCTCGCAGCAAACCAC 61.328 63.158 0.00 0.00 0.00 4.16
2402 2837 2.664851 TCCTCGCAGCAAACCACG 60.665 61.111 0.00 0.00 0.00 4.94
2403 2838 2.664851 CCTCGCAGCAAACCACGA 60.665 61.111 0.00 0.00 0.00 4.35
2404 2839 2.551270 CTCGCAGCAAACCACGAC 59.449 61.111 0.00 0.00 0.00 4.34
2405 2840 3.281751 CTCGCAGCAAACCACGACG 62.282 63.158 0.00 0.00 0.00 5.12
2406 2841 3.334751 CGCAGCAAACCACGACGA 61.335 61.111 0.00 0.00 0.00 4.20
2407 2842 2.551270 GCAGCAAACCACGACGAG 59.449 61.111 0.00 0.00 0.00 4.18
2408 2843 2.954753 GCAGCAAACCACGACGAGG 61.955 63.158 9.97 9.97 0.00 4.63
2409 2844 1.300620 CAGCAAACCACGACGAGGA 60.301 57.895 18.62 0.00 0.00 3.71
2410 2845 1.300697 AGCAAACCACGACGAGGAC 60.301 57.895 18.62 4.57 0.00 3.85
2411 2846 2.315386 GCAAACCACGACGAGGACC 61.315 63.158 18.62 0.00 0.00 4.46
2412 2847 2.019951 CAAACCACGACGAGGACCG 61.020 63.158 18.62 1.63 45.44 4.79
2413 2848 3.853597 AAACCACGACGAGGACCGC 62.854 63.158 18.62 0.00 43.32 5.68
2418 2853 4.367023 CGACGAGGACCGCCCAAA 62.367 66.667 0.00 0.00 43.32 3.28
2419 2854 2.031465 GACGAGGACCGCCCAAAA 59.969 61.111 0.00 0.00 43.32 2.44
2420 2855 1.376812 GACGAGGACCGCCCAAAAT 60.377 57.895 0.00 0.00 43.32 1.82
2421 2856 0.108041 GACGAGGACCGCCCAAAATA 60.108 55.000 0.00 0.00 43.32 1.40
2422 2857 0.107848 ACGAGGACCGCCCAAAATAG 60.108 55.000 0.00 0.00 43.32 1.73
2423 2858 0.177141 CGAGGACCGCCCAAAATAGA 59.823 55.000 0.00 0.00 37.41 1.98
2424 2859 1.202651 CGAGGACCGCCCAAAATAGAT 60.203 52.381 0.00 0.00 37.41 1.98
2425 2860 2.495084 GAGGACCGCCCAAAATAGATC 58.505 52.381 0.00 0.00 37.41 2.75
2426 2861 1.843851 AGGACCGCCCAAAATAGATCA 59.156 47.619 0.00 0.00 37.41 2.92
2427 2862 1.947456 GGACCGCCCAAAATAGATCAC 59.053 52.381 0.00 0.00 34.14 3.06
2428 2863 2.421529 GGACCGCCCAAAATAGATCACT 60.422 50.000 0.00 0.00 34.14 3.41
2429 2864 2.614057 GACCGCCCAAAATAGATCACTG 59.386 50.000 0.00 0.00 0.00 3.66
2430 2865 2.026262 ACCGCCCAAAATAGATCACTGT 60.026 45.455 0.00 0.00 0.00 3.55
2431 2866 2.355756 CCGCCCAAAATAGATCACTGTG 59.644 50.000 0.17 0.17 0.00 3.66
2432 2867 2.223340 CGCCCAAAATAGATCACTGTGC 60.223 50.000 2.12 0.00 0.00 4.57
2433 2868 2.223340 GCCCAAAATAGATCACTGTGCG 60.223 50.000 2.12 0.00 0.00 5.34
2434 2869 2.355756 CCCAAAATAGATCACTGTGCGG 59.644 50.000 2.12 0.00 0.00 5.69
2435 2870 3.270027 CCAAAATAGATCACTGTGCGGA 58.730 45.455 2.12 0.00 0.00 5.54
2436 2871 3.310774 CCAAAATAGATCACTGTGCGGAG 59.689 47.826 2.12 0.00 0.00 4.63
2437 2872 2.898729 AATAGATCACTGTGCGGAGG 57.101 50.000 2.12 0.00 0.00 4.30
2438 2873 1.781786 ATAGATCACTGTGCGGAGGT 58.218 50.000 2.12 0.00 0.00 3.85
2439 2874 0.817654 TAGATCACTGTGCGGAGGTG 59.182 55.000 2.12 4.06 0.00 4.00
2440 2875 2.046892 ATCACTGTGCGGAGGTGC 60.047 61.111 2.12 0.00 0.00 5.01
2441 2876 3.612247 ATCACTGTGCGGAGGTGCC 62.612 63.158 2.12 0.00 0.00 5.01
2442 2877 4.320456 CACTGTGCGGAGGTGCCT 62.320 66.667 0.00 0.00 0.00 4.75
2443 2878 3.560251 ACTGTGCGGAGGTGCCTT 61.560 61.111 0.00 0.00 0.00 4.35
2444 2879 3.052082 CTGTGCGGAGGTGCCTTG 61.052 66.667 0.00 0.00 0.00 3.61
2449 2884 4.711949 CGGAGGTGCCTTGCTGCT 62.712 66.667 0.00 0.00 0.00 4.24
2450 2885 3.060615 GGAGGTGCCTTGCTGCTG 61.061 66.667 0.00 0.00 0.00 4.41
2451 2886 3.745803 GAGGTGCCTTGCTGCTGC 61.746 66.667 8.89 8.89 40.20 5.25
2465 2900 2.361992 CTGCAAGCTCCATGGCCA 60.362 61.111 8.56 8.56 0.00 5.36
2466 2901 2.361992 TGCAAGCTCCATGGCCAG 60.362 61.111 13.05 0.64 0.00 4.85
2467 2902 2.044650 GCAAGCTCCATGGCCAGA 60.045 61.111 13.05 2.42 0.00 3.86
2468 2903 1.455217 GCAAGCTCCATGGCCAGAT 60.455 57.895 13.05 0.00 0.00 2.90
2469 2904 1.041447 GCAAGCTCCATGGCCAGATT 61.041 55.000 13.05 1.97 0.00 2.40
2470 2905 1.481871 CAAGCTCCATGGCCAGATTT 58.518 50.000 13.05 0.00 0.00 2.17
2471 2906 2.658285 CAAGCTCCATGGCCAGATTTA 58.342 47.619 13.05 0.00 0.00 1.40
2472 2907 3.228453 CAAGCTCCATGGCCAGATTTAT 58.772 45.455 13.05 0.00 0.00 1.40
2473 2908 3.151912 AGCTCCATGGCCAGATTTATC 57.848 47.619 13.05 0.00 0.00 1.75
2474 2909 2.715336 AGCTCCATGGCCAGATTTATCT 59.285 45.455 13.05 0.00 37.72 1.98
2491 2926 2.825387 TGCTTAGCGCAGGCCATG 60.825 61.111 11.47 0.97 45.47 3.66
2492 2927 3.589881 GCTTAGCGCAGGCCATGG 61.590 66.667 11.47 7.63 41.24 3.66
2493 2928 3.589881 CTTAGCGCAGGCCATGGC 61.590 66.667 29.47 29.47 41.24 4.40
2503 2938 3.025619 GCCATGGCCGAATTCGAG 58.974 61.111 28.76 18.74 43.02 4.04
2504 2939 3.025619 CCATGGCCGAATTCGAGC 58.974 61.111 28.76 26.13 43.02 5.03
2511 2946 2.670401 GCCGAATTCGAGCCATTTAG 57.330 50.000 28.76 9.76 43.02 1.85
2512 2947 1.264288 GCCGAATTCGAGCCATTTAGG 59.736 52.381 28.76 9.04 43.02 2.69
2513 2948 2.833794 CCGAATTCGAGCCATTTAGGA 58.166 47.619 28.76 0.00 43.02 2.94
2514 2949 3.202906 CCGAATTCGAGCCATTTAGGAA 58.797 45.455 28.76 0.00 43.02 3.36
2515 2950 3.625764 CCGAATTCGAGCCATTTAGGAAA 59.374 43.478 28.76 0.00 43.02 3.13
2516 2951 4.260784 CCGAATTCGAGCCATTTAGGAAAG 60.261 45.833 28.76 2.43 43.02 2.62
2517 2952 4.260784 CGAATTCGAGCCATTTAGGAAAGG 60.261 45.833 23.29 0.00 43.02 3.11
2518 2953 2.710096 TCGAGCCATTTAGGAAAGGG 57.290 50.000 0.00 0.00 44.82 3.95
2519 2954 2.193127 TCGAGCCATTTAGGAAAGGGA 58.807 47.619 6.81 0.00 44.82 4.20
2520 2955 2.777692 TCGAGCCATTTAGGAAAGGGAT 59.222 45.455 6.81 0.00 44.48 3.85
2521 2956 3.202151 TCGAGCCATTTAGGAAAGGGATT 59.798 43.478 6.81 0.00 41.52 3.01
2522 2957 3.954258 CGAGCCATTTAGGAAAGGGATTT 59.046 43.478 6.81 0.00 41.52 2.17
2523 2958 4.402474 CGAGCCATTTAGGAAAGGGATTTT 59.598 41.667 6.81 0.00 41.52 1.82
2524 2959 5.105351 CGAGCCATTTAGGAAAGGGATTTTT 60.105 40.000 6.81 0.00 41.52 1.94
2540 2975 3.751342 TTTTTGCGCCATGGACGA 58.249 50.000 26.00 11.14 0.00 4.20
2541 2976 1.578926 TTTTTGCGCCATGGACGAG 59.421 52.632 26.00 11.52 0.00 4.18
2542 2977 1.169661 TTTTTGCGCCATGGACGAGT 61.170 50.000 26.00 0.00 0.00 4.18
2543 2978 1.169661 TTTTGCGCCATGGACGAGTT 61.170 50.000 26.00 0.00 0.00 3.01
2544 2979 1.851021 TTTGCGCCATGGACGAGTTG 61.851 55.000 26.00 4.94 0.00 3.16
2545 2980 4.166011 GCGCCATGGACGAGTTGC 62.166 66.667 26.00 10.32 0.00 4.17
2546 2981 2.434884 CGCCATGGACGAGTTGCT 60.435 61.111 18.40 0.00 0.00 3.91
2547 2982 1.153647 CGCCATGGACGAGTTGCTA 60.154 57.895 18.40 0.00 0.00 3.49
2548 2983 1.148157 CGCCATGGACGAGTTGCTAG 61.148 60.000 18.40 0.00 0.00 3.42
2549 2984 0.108138 GCCATGGACGAGTTGCTAGT 60.108 55.000 18.40 0.00 0.00 2.57
2550 2985 1.645034 CCATGGACGAGTTGCTAGTG 58.355 55.000 5.56 0.00 0.00 2.74
2551 2986 1.204704 CCATGGACGAGTTGCTAGTGA 59.795 52.381 5.56 0.00 0.00 3.41
2552 2987 2.263077 CATGGACGAGTTGCTAGTGAC 58.737 52.381 0.00 0.00 0.00 3.67
2553 2988 0.240145 TGGACGAGTTGCTAGTGACG 59.760 55.000 0.00 0.00 0.00 4.35
2554 2989 0.240411 GGACGAGTTGCTAGTGACGT 59.760 55.000 0.00 0.00 36.71 4.34
2555 2990 1.335689 GGACGAGTTGCTAGTGACGTT 60.336 52.381 0.00 0.00 34.26 3.99
2556 2991 2.095567 GGACGAGTTGCTAGTGACGTTA 60.096 50.000 0.00 0.00 34.26 3.18
2557 2992 3.558505 GACGAGTTGCTAGTGACGTTAA 58.441 45.455 0.00 0.00 34.26 2.01
2558 2993 4.164294 GACGAGTTGCTAGTGACGTTAAT 58.836 43.478 0.00 0.00 34.26 1.40
2559 2994 3.918591 ACGAGTTGCTAGTGACGTTAATG 59.081 43.478 0.00 0.00 0.00 1.90
2560 2995 3.303495 CGAGTTGCTAGTGACGTTAATGG 59.697 47.826 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.023967 GCGCTTTTTATGATTCATTCTTGTTAT 57.976 29.630 4.14 0.00 0.00 1.89
28 29 8.026026 TGCGCTTTTTATGATTCATTCTTGTTA 58.974 29.630 9.73 0.00 0.00 2.41
29 30 6.867816 TGCGCTTTTTATGATTCATTCTTGTT 59.132 30.769 9.73 0.00 0.00 2.83
30 31 6.389091 TGCGCTTTTTATGATTCATTCTTGT 58.611 32.000 9.73 0.00 0.00 3.16
31 32 6.874297 TGCGCTTTTTATGATTCATTCTTG 57.126 33.333 9.73 0.00 0.00 3.02
32 33 9.585099 TTTATGCGCTTTTTATGATTCATTCTT 57.415 25.926 9.73 0.00 0.00 2.52
33 34 9.754382 ATTTATGCGCTTTTTATGATTCATTCT 57.246 25.926 9.73 0.00 0.00 2.40
36 37 9.531942 TGAATTTATGCGCTTTTTATGATTCAT 57.468 25.926 9.73 4.28 0.00 2.57
37 38 8.923609 TGAATTTATGCGCTTTTTATGATTCA 57.076 26.923 9.73 10.65 0.00 2.57
38 39 8.482429 CCTGAATTTATGCGCTTTTTATGATTC 58.518 33.333 9.73 8.41 0.00 2.52
39 40 8.196771 TCCTGAATTTATGCGCTTTTTATGATT 58.803 29.630 9.73 0.00 0.00 2.57
40 41 7.649306 GTCCTGAATTTATGCGCTTTTTATGAT 59.351 33.333 9.73 0.00 0.00 2.45
41 42 6.972328 GTCCTGAATTTATGCGCTTTTTATGA 59.028 34.615 9.73 0.00 0.00 2.15
42 43 6.751425 TGTCCTGAATTTATGCGCTTTTTATG 59.249 34.615 9.73 0.00 0.00 1.90
43 44 6.751888 GTGTCCTGAATTTATGCGCTTTTTAT 59.248 34.615 9.73 0.00 0.00 1.40
44 45 6.090129 GTGTCCTGAATTTATGCGCTTTTTA 58.910 36.000 9.73 0.00 0.00 1.52
45 46 4.923281 GTGTCCTGAATTTATGCGCTTTTT 59.077 37.500 9.73 0.00 0.00 1.94
46 47 4.022416 TGTGTCCTGAATTTATGCGCTTTT 60.022 37.500 9.73 0.00 0.00 2.27
47 48 3.505680 TGTGTCCTGAATTTATGCGCTTT 59.494 39.130 9.73 0.00 0.00 3.51
48 49 3.081061 TGTGTCCTGAATTTATGCGCTT 58.919 40.909 9.73 4.59 0.00 4.68
49 50 2.710377 TGTGTCCTGAATTTATGCGCT 58.290 42.857 9.73 0.00 0.00 5.92
50 51 3.485947 TTGTGTCCTGAATTTATGCGC 57.514 42.857 0.00 0.00 0.00 6.09
51 52 5.639757 TCATTTGTGTCCTGAATTTATGCG 58.360 37.500 0.00 0.00 0.00 4.73
52 53 6.035327 GCTTCATTTGTGTCCTGAATTTATGC 59.965 38.462 0.00 0.00 0.00 3.14
53 54 7.092079 TGCTTCATTTGTGTCCTGAATTTATG 58.908 34.615 0.00 0.00 0.00 1.90
54 55 7.230849 TGCTTCATTTGTGTCCTGAATTTAT 57.769 32.000 0.00 0.00 0.00 1.40
55 56 6.647334 TGCTTCATTTGTGTCCTGAATTTA 57.353 33.333 0.00 0.00 0.00 1.40
56 57 5.534207 TGCTTCATTTGTGTCCTGAATTT 57.466 34.783 0.00 0.00 0.00 1.82
57 58 5.302568 TCTTGCTTCATTTGTGTCCTGAATT 59.697 36.000 0.00 0.00 0.00 2.17
58 59 4.828939 TCTTGCTTCATTTGTGTCCTGAAT 59.171 37.500 0.00 0.00 0.00 2.57
59 60 4.206375 TCTTGCTTCATTTGTGTCCTGAA 58.794 39.130 0.00 0.00 0.00 3.02
60 61 3.819368 TCTTGCTTCATTTGTGTCCTGA 58.181 40.909 0.00 0.00 0.00 3.86
61 62 4.037208 ACTTCTTGCTTCATTTGTGTCCTG 59.963 41.667 0.00 0.00 0.00 3.86
62 63 4.210331 ACTTCTTGCTTCATTTGTGTCCT 58.790 39.130 0.00 0.00 0.00 3.85
63 64 4.540824 GACTTCTTGCTTCATTTGTGTCC 58.459 43.478 0.00 0.00 0.00 4.02
64 65 4.214437 CGACTTCTTGCTTCATTTGTGTC 58.786 43.478 0.00 0.00 0.00 3.67
65 66 3.548818 GCGACTTCTTGCTTCATTTGTGT 60.549 43.478 0.00 0.00 0.00 3.72
66 67 2.975851 GCGACTTCTTGCTTCATTTGTG 59.024 45.455 0.00 0.00 0.00 3.33
67 68 2.618241 TGCGACTTCTTGCTTCATTTGT 59.382 40.909 0.00 0.00 0.00 2.83
68 69 3.272439 TGCGACTTCTTGCTTCATTTG 57.728 42.857 0.00 0.00 0.00 2.32
69 70 3.988379 TTGCGACTTCTTGCTTCATTT 57.012 38.095 0.00 0.00 0.00 2.32
70 71 3.066621 TGTTTGCGACTTCTTGCTTCATT 59.933 39.130 0.00 0.00 0.00 2.57
71 72 2.618241 TGTTTGCGACTTCTTGCTTCAT 59.382 40.909 0.00 0.00 0.00 2.57
72 73 2.013400 TGTTTGCGACTTCTTGCTTCA 58.987 42.857 0.00 0.00 0.00 3.02
73 74 2.755836 TGTTTGCGACTTCTTGCTTC 57.244 45.000 0.00 0.00 0.00 3.86
74 75 4.065088 TCTATGTTTGCGACTTCTTGCTT 58.935 39.130 0.00 0.00 0.00 3.91
75 76 3.433615 GTCTATGTTTGCGACTTCTTGCT 59.566 43.478 0.00 0.00 0.00 3.91
76 77 3.186409 TGTCTATGTTTGCGACTTCTTGC 59.814 43.478 0.00 0.00 0.00 4.01
77 78 4.990543 TGTCTATGTTTGCGACTTCTTG 57.009 40.909 0.00 0.00 0.00 3.02
78 79 5.581085 GGTATGTCTATGTTTGCGACTTCTT 59.419 40.000 0.00 0.00 0.00 2.52
79 80 5.109903 GGTATGTCTATGTTTGCGACTTCT 58.890 41.667 0.00 0.00 0.00 2.85
80 81 4.270325 GGGTATGTCTATGTTTGCGACTTC 59.730 45.833 0.00 0.00 0.00 3.01
81 82 4.189231 GGGTATGTCTATGTTTGCGACTT 58.811 43.478 0.00 0.00 0.00 3.01
82 83 3.431766 GGGGTATGTCTATGTTTGCGACT 60.432 47.826 0.00 0.00 0.00 4.18
83 84 2.870411 GGGGTATGTCTATGTTTGCGAC 59.130 50.000 0.00 0.00 0.00 5.19
84 85 2.502130 TGGGGTATGTCTATGTTTGCGA 59.498 45.455 0.00 0.00 0.00 5.10
85 86 2.912771 TGGGGTATGTCTATGTTTGCG 58.087 47.619 0.00 0.00 0.00 4.85
86 87 5.652994 TTTTGGGGTATGTCTATGTTTGC 57.347 39.130 0.00 0.00 0.00 3.68
87 88 9.801873 CTTAATTTTGGGGTATGTCTATGTTTG 57.198 33.333 0.00 0.00 0.00 2.93
88 89 9.762381 TCTTAATTTTGGGGTATGTCTATGTTT 57.238 29.630 0.00 0.00 0.00 2.83
89 90 9.185680 GTCTTAATTTTGGGGTATGTCTATGTT 57.814 33.333 0.00 0.00 0.00 2.71
90 91 7.778382 GGTCTTAATTTTGGGGTATGTCTATGT 59.222 37.037 0.00 0.00 0.00 2.29
91 92 7.777910 TGGTCTTAATTTTGGGGTATGTCTATG 59.222 37.037 0.00 0.00 0.00 2.23
92 93 7.878495 TGGTCTTAATTTTGGGGTATGTCTAT 58.122 34.615 0.00 0.00 0.00 1.98
93 94 7.183112 TCTGGTCTTAATTTTGGGGTATGTCTA 59.817 37.037 0.00 0.00 0.00 2.59
94 95 6.011981 TCTGGTCTTAATTTTGGGGTATGTCT 60.012 38.462 0.00 0.00 0.00 3.41
95 96 6.184789 TCTGGTCTTAATTTTGGGGTATGTC 58.815 40.000 0.00 0.00 0.00 3.06
96 97 6.147437 TCTGGTCTTAATTTTGGGGTATGT 57.853 37.500 0.00 0.00 0.00 2.29
97 98 5.594317 CCTCTGGTCTTAATTTTGGGGTATG 59.406 44.000 0.00 0.00 0.00 2.39
98 99 5.766590 CCTCTGGTCTTAATTTTGGGGTAT 58.233 41.667 0.00 0.00 0.00 2.73
99 100 4.569015 GCCTCTGGTCTTAATTTTGGGGTA 60.569 45.833 0.00 0.00 0.00 3.69
100 101 3.817931 GCCTCTGGTCTTAATTTTGGGGT 60.818 47.826 0.00 0.00 0.00 4.95
101 102 2.760650 GCCTCTGGTCTTAATTTTGGGG 59.239 50.000 0.00 0.00 0.00 4.96
102 103 3.430453 TGCCTCTGGTCTTAATTTTGGG 58.570 45.455 0.00 0.00 0.00 4.12
103 104 5.467035 TTTGCCTCTGGTCTTAATTTTGG 57.533 39.130 0.00 0.00 0.00 3.28
104 105 6.279882 TGTTTTGCCTCTGGTCTTAATTTTG 58.720 36.000 0.00 0.00 0.00 2.44
105 106 6.478512 TGTTTTGCCTCTGGTCTTAATTTT 57.521 33.333 0.00 0.00 0.00 1.82
106 107 6.041979 ACATGTTTTGCCTCTGGTCTTAATTT 59.958 34.615 0.00 0.00 0.00 1.82
107 108 5.539955 ACATGTTTTGCCTCTGGTCTTAATT 59.460 36.000 0.00 0.00 0.00 1.40
108 109 5.079643 ACATGTTTTGCCTCTGGTCTTAAT 58.920 37.500 0.00 0.00 0.00 1.40
109 110 4.469657 ACATGTTTTGCCTCTGGTCTTAA 58.530 39.130 0.00 0.00 0.00 1.85
110 111 4.098914 ACATGTTTTGCCTCTGGTCTTA 57.901 40.909 0.00 0.00 0.00 2.10
111 112 2.949447 ACATGTTTTGCCTCTGGTCTT 58.051 42.857 0.00 0.00 0.00 3.01
112 113 2.664402 ACATGTTTTGCCTCTGGTCT 57.336 45.000 0.00 0.00 0.00 3.85
113 114 6.460123 CCATATAACATGTTTTGCCTCTGGTC 60.460 42.308 17.78 0.00 0.00 4.02
114 115 5.360714 CCATATAACATGTTTTGCCTCTGGT 59.639 40.000 17.78 0.00 0.00 4.00
115 116 5.360714 ACCATATAACATGTTTTGCCTCTGG 59.639 40.000 17.78 15.10 0.00 3.86
116 117 6.455360 ACCATATAACATGTTTTGCCTCTG 57.545 37.500 17.78 5.40 0.00 3.35
117 118 7.178274 TCAAACCATATAACATGTTTTGCCTCT 59.822 33.333 17.78 0.00 33.34 3.69
118 119 7.319646 TCAAACCATATAACATGTTTTGCCTC 58.680 34.615 17.78 0.00 33.34 4.70
119 120 7.238486 TCAAACCATATAACATGTTTTGCCT 57.762 32.000 17.78 0.00 33.34 4.75
120 121 7.064490 CCTTCAAACCATATAACATGTTTTGCC 59.936 37.037 17.78 0.00 33.34 4.52
121 122 7.064490 CCCTTCAAACCATATAACATGTTTTGC 59.936 37.037 17.78 0.00 33.34 3.68
122 123 8.310382 TCCCTTCAAACCATATAACATGTTTTG 58.690 33.333 17.78 12.85 34.21 2.44
123 124 8.429237 TCCCTTCAAACCATATAACATGTTTT 57.571 30.769 17.78 11.71 0.00 2.43
124 125 8.429237 TTCCCTTCAAACCATATAACATGTTT 57.571 30.769 17.78 7.40 0.00 2.83
125 126 8.429237 TTTCCCTTCAAACCATATAACATGTT 57.571 30.769 16.68 16.68 0.00 2.71
126 127 7.673926 ACTTTCCCTTCAAACCATATAACATGT 59.326 33.333 0.00 0.00 0.00 3.21
127 128 7.975616 CACTTTCCCTTCAAACCATATAACATG 59.024 37.037 0.00 0.00 0.00 3.21
128 129 7.673926 ACACTTTCCCTTCAAACCATATAACAT 59.326 33.333 0.00 0.00 0.00 2.71
129 130 7.007723 ACACTTTCCCTTCAAACCATATAACA 58.992 34.615 0.00 0.00 0.00 2.41
130 131 7.462571 ACACTTTCCCTTCAAACCATATAAC 57.537 36.000 0.00 0.00 0.00 1.89
143 144 3.673543 TGTTGGGTTACACTTTCCCTT 57.326 42.857 0.00 0.00 41.58 3.95
151 152 7.733402 TCTAACTTTGTATGTTGGGTTACAC 57.267 36.000 0.00 0.00 0.00 2.90
156 157 9.847224 CCTATATTCTAACTTTGTATGTTGGGT 57.153 33.333 0.00 0.00 0.00 4.51
179 181 8.518430 TTGCAATGACTATATCTTTTTGCCTA 57.482 30.769 0.00 0.00 37.48 3.93
200 202 4.481930 AATTTCTTGACGTTCGATTGCA 57.518 36.364 0.00 0.00 0.00 4.08
204 206 7.827819 TCATTCTAATTTCTTGACGTTCGAT 57.172 32.000 0.00 0.00 0.00 3.59
214 216 9.367160 TCTTTTCCACCTTCATTCTAATTTCTT 57.633 29.630 0.00 0.00 0.00 2.52
215 217 8.797438 GTCTTTTCCACCTTCATTCTAATTTCT 58.203 33.333 0.00 0.00 0.00 2.52
222 224 4.453480 TGGTCTTTTCCACCTTCATTCT 57.547 40.909 0.00 0.00 34.66 2.40
231 233 9.626045 CTGAATTATTTAGTTGGTCTTTTCCAC 57.374 33.333 0.00 0.00 37.20 4.02
234 236 9.346725 CTGCTGAATTATTTAGTTGGTCTTTTC 57.653 33.333 0.00 0.00 0.00 2.29
239 241 7.391148 TTCCTGCTGAATTATTTAGTTGGTC 57.609 36.000 0.00 0.00 0.00 4.02
243 245 8.579850 TGTGATTCCTGCTGAATTATTTAGTT 57.420 30.769 3.99 0.00 43.81 2.24
271 290 0.976641 TTCTTGCAGTCCGATCACCT 59.023 50.000 0.00 0.00 0.00 4.00
274 293 4.071423 TCAAATTTCTTGCAGTCCGATCA 58.929 39.130 0.00 0.00 0.00 2.92
281 300 5.964758 TGTTTCACTCAAATTTCTTGCAGT 58.035 33.333 0.00 0.00 0.00 4.40
283 302 7.846644 ATTTGTTTCACTCAAATTTCTTGCA 57.153 28.000 0.00 0.00 40.97 4.08
396 485 3.081710 AGGGGATGGTTAAGGAAAACG 57.918 47.619 0.00 0.00 0.00 3.60
408 497 1.337118 GAGAGCTCACTAGGGGATGG 58.663 60.000 17.77 0.00 0.00 3.51
459 830 0.691078 TGAGATGGCCAGGACTACCC 60.691 60.000 13.05 0.00 36.73 3.69
460 831 0.755686 CTGAGATGGCCAGGACTACC 59.244 60.000 13.05 0.70 0.00 3.18
499 870 1.933307 ATTTTAGGGTCGGGCCTGGG 61.933 60.000 12.87 0.00 37.43 4.45
500 871 0.465642 GATTTTAGGGTCGGGCCTGG 60.466 60.000 12.87 0.00 37.43 4.45
501 872 0.465642 GGATTTTAGGGTCGGGCCTG 60.466 60.000 4.71 4.71 37.43 4.85
502 873 0.917333 TGGATTTTAGGGTCGGGCCT 60.917 55.000 0.84 0.00 37.43 5.19
503 874 0.465642 CTGGATTTTAGGGTCGGGCC 60.466 60.000 0.00 0.00 0.00 5.80
504 875 0.465642 CCTGGATTTTAGGGTCGGGC 60.466 60.000 0.00 0.00 0.00 6.13
505 876 1.134189 GTCCTGGATTTTAGGGTCGGG 60.134 57.143 0.00 0.00 35.96 5.14
506 877 1.134189 GGTCCTGGATTTTAGGGTCGG 60.134 57.143 0.00 0.00 35.96 4.79
507 878 1.838077 AGGTCCTGGATTTTAGGGTCG 59.162 52.381 0.00 0.00 35.96 4.79
508 879 3.391626 CCTAGGTCCTGGATTTTAGGGTC 59.608 52.174 17.01 0.00 35.96 4.46
509 880 3.394645 CCTAGGTCCTGGATTTTAGGGT 58.605 50.000 17.01 0.00 35.96 4.34
510 881 2.106684 GCCTAGGTCCTGGATTTTAGGG 59.893 54.545 22.14 12.79 35.96 3.53
511 882 2.106684 GGCCTAGGTCCTGGATTTTAGG 59.893 54.545 11.31 19.04 36.63 2.69
512 883 2.106684 GGGCCTAGGTCCTGGATTTTAG 59.893 54.545 26.11 2.66 36.84 1.85
513 884 2.132686 GGGCCTAGGTCCTGGATTTTA 58.867 52.381 26.11 0.00 36.84 1.52
514 885 0.927029 GGGCCTAGGTCCTGGATTTT 59.073 55.000 26.11 0.00 36.84 1.82
515 886 1.345715 CGGGCCTAGGTCCTGGATTT 61.346 60.000 29.64 0.00 37.84 2.17
516 887 1.766461 CGGGCCTAGGTCCTGGATT 60.766 63.158 29.64 0.00 37.84 3.01
517 888 2.037304 ATCGGGCCTAGGTCCTGGAT 62.037 60.000 29.64 21.82 37.84 3.41
518 889 2.711899 ATCGGGCCTAGGTCCTGGA 61.712 63.158 29.64 20.54 37.84 3.86
519 890 2.122813 ATCGGGCCTAGGTCCTGG 60.123 66.667 29.64 15.67 37.84 4.45
520 891 1.457643 TCATCGGGCCTAGGTCCTG 60.458 63.158 29.64 23.96 37.84 3.86
523 894 0.831307 AAACTCATCGGGCCTAGGTC 59.169 55.000 11.31 8.02 0.00 3.85
524 895 0.541863 CAAACTCATCGGGCCTAGGT 59.458 55.000 11.31 0.00 0.00 3.08
525 896 0.541863 ACAAACTCATCGGGCCTAGG 59.458 55.000 3.67 3.67 0.00 3.02
526 897 1.473434 GGACAAACTCATCGGGCCTAG 60.473 57.143 0.84 0.00 0.00 3.02
527 898 0.539986 GGACAAACTCATCGGGCCTA 59.460 55.000 0.84 0.00 0.00 3.93
528 899 1.299976 GGACAAACTCATCGGGCCT 59.700 57.895 0.84 0.00 0.00 5.19
531 902 1.382522 CCATGGACAAACTCATCGGG 58.617 55.000 5.56 0.00 0.00 5.14
532 903 1.382522 CCCATGGACAAACTCATCGG 58.617 55.000 15.22 0.00 0.00 4.18
533 904 0.734889 GCCCATGGACAAACTCATCG 59.265 55.000 15.22 0.00 0.00 3.84
535 906 0.680921 CGGCCCATGGACAAACTCAT 60.681 55.000 15.22 0.00 0.00 2.90
536 907 1.303236 CGGCCCATGGACAAACTCA 60.303 57.895 15.22 0.00 0.00 3.41
538 909 2.035626 CCGGCCCATGGACAAACT 59.964 61.111 15.22 0.00 0.00 2.66
539 910 3.068064 CCCGGCCCATGGACAAAC 61.068 66.667 15.22 0.00 0.00 2.93
557 928 0.600057 GCTCAAAACTCAGGCCCAAG 59.400 55.000 0.00 0.00 0.00 3.61
558 929 0.827507 GGCTCAAAACTCAGGCCCAA 60.828 55.000 0.00 0.00 37.12 4.12
559 930 1.228552 GGCTCAAAACTCAGGCCCA 60.229 57.895 0.00 0.00 37.12 5.36
563 934 2.205022 TGATGGGCTCAAAACTCAGG 57.795 50.000 0.00 0.00 0.00 3.86
564 935 2.886523 TGTTGATGGGCTCAAAACTCAG 59.113 45.455 14.55 0.00 45.27 3.35
566 937 2.229784 CCTGTTGATGGGCTCAAAACTC 59.770 50.000 14.55 0.00 45.27 3.01
567 938 2.242043 CCTGTTGATGGGCTCAAAACT 58.758 47.619 14.55 0.00 45.27 2.66
569 940 1.631405 CCCTGTTGATGGGCTCAAAA 58.369 50.000 0.00 0.00 45.27 2.44
570 941 3.362040 CCCTGTTGATGGGCTCAAA 57.638 52.632 0.00 0.00 45.27 2.69
577 948 1.379044 GTCCAGGCCCTGTTGATGG 60.379 63.158 10.47 0.00 0.00 3.51
578 949 1.746615 CGTCCAGGCCCTGTTGATG 60.747 63.158 10.47 2.40 0.00 3.07
579 950 2.671070 CGTCCAGGCCCTGTTGAT 59.329 61.111 10.47 0.00 0.00 2.57
591 962 2.672651 CAAGCACATGCCCGTCCA 60.673 61.111 0.00 0.00 43.38 4.02
593 964 1.308069 ATGTCAAGCACATGCCCGTC 61.308 55.000 0.00 0.00 44.70 4.79
594 965 0.035534 TATGTCAAGCACATGCCCGT 60.036 50.000 0.00 0.00 45.98 5.28
597 968 2.800629 GCCAATATGTCAAGCACATGCC 60.801 50.000 0.00 0.00 45.98 4.40
598 969 2.159212 TGCCAATATGTCAAGCACATGC 60.159 45.455 0.00 0.00 45.98 4.06
599 970 3.786516 TGCCAATATGTCAAGCACATG 57.213 42.857 0.00 0.00 45.98 3.21
601 972 4.804868 AAATGCCAATATGTCAAGCACA 57.195 36.364 0.00 0.00 40.18 4.57
603 974 6.154192 TCCTTAAAATGCCAATATGTCAAGCA 59.846 34.615 0.00 0.00 37.94 3.91
604 975 6.572519 TCCTTAAAATGCCAATATGTCAAGC 58.427 36.000 0.00 0.00 0.00 4.01
605 976 8.469200 TCTTCCTTAAAATGCCAATATGTCAAG 58.531 33.333 0.00 0.00 0.00 3.02
607 978 7.068593 CCTCTTCCTTAAAATGCCAATATGTCA 59.931 37.037 0.00 0.00 0.00 3.58
608 979 7.428826 CCTCTTCCTTAAAATGCCAATATGTC 58.571 38.462 0.00 0.00 0.00 3.06
609 980 6.183360 GCCTCTTCCTTAAAATGCCAATATGT 60.183 38.462 0.00 0.00 0.00 2.29
610 981 6.218746 GCCTCTTCCTTAAAATGCCAATATG 58.781 40.000 0.00 0.00 0.00 1.78
611 982 5.305386 GGCCTCTTCCTTAAAATGCCAATAT 59.695 40.000 0.00 0.00 37.58 1.28
612 983 4.649218 GGCCTCTTCCTTAAAATGCCAATA 59.351 41.667 0.00 0.00 37.58 1.90
613 984 3.452264 GGCCTCTTCCTTAAAATGCCAAT 59.548 43.478 0.00 0.00 37.58 3.16
615 986 2.456577 GGCCTCTTCCTTAAAATGCCA 58.543 47.619 0.00 0.00 37.58 4.92
616 987 1.757118 GGGCCTCTTCCTTAAAATGCC 59.243 52.381 0.84 0.00 36.92 4.40
617 988 1.405463 CGGGCCTCTTCCTTAAAATGC 59.595 52.381 0.84 0.00 0.00 3.56
618 989 2.024414 CCGGGCCTCTTCCTTAAAATG 58.976 52.381 0.84 0.00 0.00 2.32
619 990 1.685180 GCCGGGCCTCTTCCTTAAAAT 60.685 52.381 8.12 0.00 0.00 1.82
620 991 0.323087 GCCGGGCCTCTTCCTTAAAA 60.323 55.000 8.12 0.00 0.00 1.52
640 1011 0.181350 CTTAGGGCTTAGGGCTGTGG 59.819 60.000 0.00 0.00 41.46 4.17
642 1013 0.988678 CCCTTAGGGCTTAGGGCTGT 60.989 60.000 3.52 0.00 44.40 4.40
643 1014 1.839894 CCCTTAGGGCTTAGGGCTG 59.160 63.158 3.52 0.00 44.40 4.85
644 1015 4.420741 CCCTTAGGGCTTAGGGCT 57.579 61.111 3.52 0.00 44.40 5.19
654 1025 2.604912 AGCCCTGAAAAACCCTTAGG 57.395 50.000 0.00 0.00 40.04 2.69
655 1026 4.955811 AAAAGCCCTGAAAAACCCTTAG 57.044 40.909 0.00 0.00 0.00 2.18
656 1027 5.221283 CGTAAAAAGCCCTGAAAAACCCTTA 60.221 40.000 0.00 0.00 0.00 2.69
657 1028 4.442332 CGTAAAAAGCCCTGAAAAACCCTT 60.442 41.667 0.00 0.00 0.00 3.95
658 1029 3.069016 CGTAAAAAGCCCTGAAAAACCCT 59.931 43.478 0.00 0.00 0.00 4.34
659 1030 3.068448 TCGTAAAAAGCCCTGAAAAACCC 59.932 43.478 0.00 0.00 0.00 4.11
660 1031 4.037089 TCTCGTAAAAAGCCCTGAAAAACC 59.963 41.667 0.00 0.00 0.00 3.27
661 1032 5.177725 TCTCGTAAAAAGCCCTGAAAAAC 57.822 39.130 0.00 0.00 0.00 2.43
662 1033 5.278758 CCATCTCGTAAAAAGCCCTGAAAAA 60.279 40.000 0.00 0.00 0.00 1.94
663 1034 4.217550 CCATCTCGTAAAAAGCCCTGAAAA 59.782 41.667 0.00 0.00 0.00 2.29
664 1035 3.756434 CCATCTCGTAAAAAGCCCTGAAA 59.244 43.478 0.00 0.00 0.00 2.69
665 1036 3.343617 CCATCTCGTAAAAAGCCCTGAA 58.656 45.455 0.00 0.00 0.00 3.02
666 1037 2.355716 CCCATCTCGTAAAAAGCCCTGA 60.356 50.000 0.00 0.00 0.00 3.86
667 1038 2.017049 CCCATCTCGTAAAAAGCCCTG 58.983 52.381 0.00 0.00 0.00 4.45
668 1039 1.682087 GCCCATCTCGTAAAAAGCCCT 60.682 52.381 0.00 0.00 0.00 5.19
669 1040 0.738975 GCCCATCTCGTAAAAAGCCC 59.261 55.000 0.00 0.00 0.00 5.19
670 1041 0.738975 GGCCCATCTCGTAAAAAGCC 59.261 55.000 0.00 0.00 0.00 4.35
671 1042 0.377203 CGGCCCATCTCGTAAAAAGC 59.623 55.000 0.00 0.00 0.00 3.51
672 1043 1.014352 CCGGCCCATCTCGTAAAAAG 58.986 55.000 0.00 0.00 0.00 2.27
673 1044 0.393267 CCCGGCCCATCTCGTAAAAA 60.393 55.000 0.00 0.00 0.00 1.94
674 1045 1.222387 CCCGGCCCATCTCGTAAAA 59.778 57.895 0.00 0.00 0.00 1.52
675 1046 2.904905 CCCGGCCCATCTCGTAAA 59.095 61.111 0.00 0.00 0.00 2.01
676 1047 3.857038 GCCCGGCCCATCTCGTAA 61.857 66.667 0.00 0.00 0.00 3.18
677 1048 4.853142 AGCCCGGCCCATCTCGTA 62.853 66.667 5.55 0.00 0.00 3.43
680 1051 4.883354 CCAAGCCCGGCCCATCTC 62.883 72.222 5.55 0.00 0.00 2.75
688 1059 2.158561 CTTTTCAAGCCCAAGCCCGG 62.159 60.000 0.00 0.00 41.25 5.73
689 1060 1.290009 CTTTTCAAGCCCAAGCCCG 59.710 57.895 0.00 0.00 41.25 6.13
690 1061 1.546029 CTACTTTTCAAGCCCAAGCCC 59.454 52.381 0.00 0.00 41.25 5.19
691 1062 1.546029 CCTACTTTTCAAGCCCAAGCC 59.454 52.381 0.00 0.00 41.25 4.35
692 1063 1.067565 GCCTACTTTTCAAGCCCAAGC 60.068 52.381 0.00 0.00 40.32 4.01
693 1064 1.546029 GGCCTACTTTTCAAGCCCAAG 59.454 52.381 0.00 0.00 37.66 3.61
694 1065 1.627864 GGCCTACTTTTCAAGCCCAA 58.372 50.000 0.00 0.00 37.66 4.12
695 1066 3.356814 GGCCTACTTTTCAAGCCCA 57.643 52.632 0.00 0.00 37.66 5.36
697 1068 0.322187 TCGGGCCTACTTTTCAAGCC 60.322 55.000 0.84 0.00 43.09 4.35
698 1069 1.401905 CATCGGGCCTACTTTTCAAGC 59.598 52.381 0.84 0.00 0.00 4.01
699 1070 2.017049 CCATCGGGCCTACTTTTCAAG 58.983 52.381 0.84 0.00 0.00 3.02
700 1071 1.353022 ACCATCGGGCCTACTTTTCAA 59.647 47.619 0.84 0.00 37.90 2.69
701 1072 0.988832 ACCATCGGGCCTACTTTTCA 59.011 50.000 0.84 0.00 37.90 2.69
702 1073 2.994186 TACCATCGGGCCTACTTTTC 57.006 50.000 0.84 0.00 37.90 2.29
703 1074 2.092592 CCTTACCATCGGGCCTACTTTT 60.093 50.000 0.84 0.00 37.90 2.27
704 1075 1.489230 CCTTACCATCGGGCCTACTTT 59.511 52.381 0.84 0.00 37.90 2.66
705 1076 1.129058 CCTTACCATCGGGCCTACTT 58.871 55.000 0.84 0.00 37.90 2.24
706 1077 1.408453 GCCTTACCATCGGGCCTACT 61.408 60.000 0.84 0.00 39.96 2.57
707 1078 1.070957 GCCTTACCATCGGGCCTAC 59.929 63.158 0.84 0.00 39.96 3.18
708 1079 3.558475 GCCTTACCATCGGGCCTA 58.442 61.111 0.84 0.00 39.96 3.93
711 1082 2.203209 CAGGCCTTACCATCGGGC 60.203 66.667 0.00 0.00 45.46 6.13
712 1083 2.510906 CCAGGCCTTACCATCGGG 59.489 66.667 0.00 0.00 43.14 5.14
713 1084 2.044806 CTCCCAGGCCTTACCATCGG 62.045 65.000 0.00 0.00 43.14 4.18
714 1085 1.447643 CTCCCAGGCCTTACCATCG 59.552 63.158 0.00 0.00 43.14 3.84
715 1086 1.709994 CCCTCCCAGGCCTTACCATC 61.710 65.000 0.00 0.00 43.14 3.51
716 1087 1.697754 CCCTCCCAGGCCTTACCAT 60.698 63.158 0.00 0.00 43.14 3.55
717 1088 2.286121 CCCTCCCAGGCCTTACCA 60.286 66.667 0.00 0.00 43.14 3.25
737 1108 1.228552 GGCAGAAAACTGAGGCCCA 60.229 57.895 0.00 0.00 38.70 5.36
738 1109 0.613012 ATGGCAGAAAACTGAGGCCC 60.613 55.000 0.00 0.00 43.96 5.80
739 1110 0.529378 CATGGCAGAAAACTGAGGCC 59.471 55.000 0.00 0.00 44.82 5.19
740 1111 0.529378 CCATGGCAGAAAACTGAGGC 59.471 55.000 0.00 0.00 0.00 4.70
741 1112 1.180029 CCCATGGCAGAAAACTGAGG 58.820 55.000 6.09 0.00 0.00 3.86
781 1152 2.354103 CGTGAGTATATCTGGCCATGGG 60.354 54.545 15.13 0.00 0.00 4.00
782 1153 2.354103 CCGTGAGTATATCTGGCCATGG 60.354 54.545 5.51 7.63 0.00 3.66
783 1154 2.354103 CCCGTGAGTATATCTGGCCATG 60.354 54.545 5.51 0.00 0.00 3.66
784 1155 1.902508 CCCGTGAGTATATCTGGCCAT 59.097 52.381 5.51 0.00 0.00 4.40
785 1156 1.338107 CCCGTGAGTATATCTGGCCA 58.662 55.000 4.71 4.71 0.00 5.36
786 1157 0.037232 GCCCGTGAGTATATCTGGCC 60.037 60.000 0.00 0.00 33.99 5.36
787 1158 0.969894 AGCCCGTGAGTATATCTGGC 59.030 55.000 0.00 0.00 37.78 4.85
788 1159 2.239400 TGAGCCCGTGAGTATATCTGG 58.761 52.381 0.00 0.00 0.00 3.86
789 1160 3.367806 CCATGAGCCCGTGAGTATATCTG 60.368 52.174 0.00 0.00 0.00 2.90
790 1161 2.828520 CCATGAGCCCGTGAGTATATCT 59.171 50.000 0.00 0.00 0.00 1.98
791 1162 2.826128 TCCATGAGCCCGTGAGTATATC 59.174 50.000 0.00 0.00 0.00 1.63
792 1163 2.889512 TCCATGAGCCCGTGAGTATAT 58.110 47.619 0.00 0.00 0.00 0.86
793 1164 2.375014 TCCATGAGCCCGTGAGTATA 57.625 50.000 0.00 0.00 0.00 1.47
794 1165 1.345741 CATCCATGAGCCCGTGAGTAT 59.654 52.381 0.00 0.00 0.00 2.12
795 1166 0.752658 CATCCATGAGCCCGTGAGTA 59.247 55.000 0.00 0.00 0.00 2.59
796 1167 1.524002 CATCCATGAGCCCGTGAGT 59.476 57.895 0.00 0.00 0.00 3.41
797 1168 1.227764 CCATCCATGAGCCCGTGAG 60.228 63.158 0.00 0.00 0.00 3.51
798 1169 2.910360 CCATCCATGAGCCCGTGA 59.090 61.111 0.00 0.00 0.00 4.35
850 1221 1.689813 TCCGTGTGACTAACCATGTGT 59.310 47.619 0.00 0.00 0.00 3.72
855 1226 0.108992 GCGATCCGTGTGACTAACCA 60.109 55.000 0.00 0.00 0.00 3.67
917 1289 2.281139 GCCGCTGGATTAGGGAGC 60.281 66.667 0.00 0.00 41.61 4.70
1027 1399 3.404438 TAGGGGCGCGGAATTGGT 61.404 61.111 8.83 0.00 0.00 3.67
1032 1404 1.218854 GTTAAGTAGGGGCGCGGAA 59.781 57.895 8.83 0.00 0.00 4.30
1063 1435 1.208293 GTGGTCTGAGGATCTTGGGAC 59.792 57.143 0.00 0.00 34.92 4.46
1107 1485 4.043200 GGGGAGTTTGCTGCGTGC 62.043 66.667 0.00 0.00 43.25 5.34
1141 1519 2.258726 GCGGGCCATTTACGGATCC 61.259 63.158 4.39 0.00 0.00 3.36
1148 1526 2.403378 GCTTCGTGCGGGCCATTTA 61.403 57.895 4.39 0.00 0.00 1.40
1252 1631 2.032681 GTGGGGCTTCTTCACGCT 59.967 61.111 0.00 0.00 0.00 5.07
1380 1760 0.966920 GGAGGTCGGTCTTGAAGTCA 59.033 55.000 0.00 0.00 0.00 3.41
1493 1873 0.795698 CATGATGGTGACGCGTTTGA 59.204 50.000 15.53 0.00 0.00 2.69
1497 1877 2.819595 GGCATGATGGTGACGCGT 60.820 61.111 13.85 13.85 0.00 6.01
1582 1962 1.144936 CGATGAGGCCTCAAGGGAC 59.855 63.158 38.02 23.36 45.71 4.46
1585 1965 1.817099 GCACGATGAGGCCTCAAGG 60.817 63.158 38.02 31.31 43.58 3.61
1675 2055 3.403038 ACAGAGCTGCGTACTTTTCATT 58.597 40.909 0.00 0.00 0.00 2.57
1686 2066 2.413453 GAGAAAGGTAAACAGAGCTGCG 59.587 50.000 0.00 0.00 0.00 5.18
1778 2158 9.929722 TTATGCAAATTTTAGTAGCGACTATTG 57.070 29.630 7.56 9.94 37.99 1.90
1780 2160 9.931210 GTTTATGCAAATTTTAGTAGCGACTAT 57.069 29.630 7.56 0.00 37.99 2.12
1781 2161 8.937884 TGTTTATGCAAATTTTAGTAGCGACTA 58.062 29.630 2.16 2.16 37.10 2.59
1785 2166 7.247728 TCCTGTTTATGCAAATTTTAGTAGCG 58.752 34.615 0.00 0.00 0.00 4.26
1789 2170 8.815912 AGGATTCCTGTTTATGCAAATTTTAGT 58.184 29.630 3.86 0.00 29.57 2.24
1814 2198 7.286087 CCAGATCTAGATGGATAGAGATTGGAG 59.714 44.444 10.74 0.00 39.02 3.86
1824 2208 7.038017 GGATTGTTTCCCAGATCTAGATGGATA 60.038 40.741 10.74 3.44 39.02 2.59
1830 2214 3.388024 CCGGATTGTTTCCCAGATCTAGA 59.612 47.826 0.00 0.00 42.06 2.43
1836 2220 1.001393 GGCCGGATTGTTTCCCAGA 60.001 57.895 5.05 0.00 42.06 3.86
1856 2242 2.126618 CGTCGGCTTACGTGCTGA 60.127 61.111 5.35 5.35 45.01 4.26
1881 2267 2.489275 CGGATGGAATTTGGGGCGG 61.489 63.158 0.00 0.00 0.00 6.13
1923 2309 2.717809 GAAACGTCGAGCCGCAGAC 61.718 63.158 0.00 8.45 0.00 3.51
1925 2311 3.479269 GGAAACGTCGAGCCGCAG 61.479 66.667 0.00 0.00 0.00 5.18
1935 2321 4.699522 GGGCGAGCTGGGAAACGT 62.700 66.667 0.00 0.00 0.00 3.99
1961 2347 2.887568 CGCATGAGCACGTCTCCC 60.888 66.667 0.00 2.02 41.18 4.30
2002 2388 1.153349 GTCCTCCCGCATCTTGGAC 60.153 63.158 0.00 0.00 40.05 4.02
2031 2417 0.179045 GTTCCAGCAGCCCGATATGT 60.179 55.000 0.00 0.00 0.00 2.29
2111 2507 6.605471 TGGTACTACCATACATCCATCATC 57.395 41.667 3.57 0.00 44.79 2.92
2184 2612 6.287589 ACAATTTGTACCTTGAACCAAACA 57.712 33.333 0.00 0.00 30.37 2.83
2202 2631 5.640357 CCACAAATAAGCTGATGCAACAATT 59.360 36.000 0.00 0.00 42.74 2.32
2211 2640 3.689347 TGAGCACCACAAATAAGCTGAT 58.311 40.909 0.00 0.00 35.36 2.90
2267 2696 4.429505 TCAGGGATTCATATGTAGGGGAG 58.570 47.826 1.90 0.00 0.00 4.30
2268 2697 4.502036 TCAGGGATTCATATGTAGGGGA 57.498 45.455 1.90 0.00 0.00 4.81
2286 2721 5.643777 AGTTAAATCAATGACGACCCTTCAG 59.356 40.000 0.00 0.00 0.00 3.02
2289 2724 6.708285 ACTAGTTAAATCAATGACGACCCTT 58.292 36.000 0.00 0.00 0.00 3.95
2304 2739 7.488792 GCGTTTTCCTTTCCAAAACTAGTTAAA 59.511 33.333 8.92 4.91 40.25 1.52
2307 2742 5.126545 AGCGTTTTCCTTTCCAAAACTAGTT 59.873 36.000 1.12 1.12 40.25 2.24
2322 2757 0.390735 TCCGGCTCTAAGCGTTTTCC 60.391 55.000 0.00 0.00 43.62 3.13
2325 2760 1.448013 GCTCCGGCTCTAAGCGTTT 60.448 57.895 0.00 0.00 43.62 3.60
2326 2761 2.184579 GCTCCGGCTCTAAGCGTT 59.815 61.111 0.00 0.00 43.62 4.84
2329 2764 2.846652 TAGCGCTCCGGCTCTAAGC 61.847 63.158 16.34 0.00 43.54 3.09
2330 2765 1.008309 GTAGCGCTCCGGCTCTAAG 60.008 63.158 16.34 0.00 43.54 2.18
2331 2766 1.035932 AAGTAGCGCTCCGGCTCTAA 61.036 55.000 16.34 0.00 43.54 2.10
2332 2767 1.035932 AAAGTAGCGCTCCGGCTCTA 61.036 55.000 16.34 0.00 43.54 2.43
2333 2768 2.352032 AAAGTAGCGCTCCGGCTCT 61.352 57.895 16.34 0.97 43.54 4.09
2334 2769 2.167861 CAAAGTAGCGCTCCGGCTC 61.168 63.158 16.34 0.00 43.54 4.70
2335 2770 2.125512 CAAAGTAGCGCTCCGGCT 60.126 61.111 16.34 5.44 46.88 5.52
2336 2771 2.434359 ACAAAGTAGCGCTCCGGC 60.434 61.111 16.34 2.71 0.00 6.13
2337 2772 1.810030 GGACAAAGTAGCGCTCCGG 60.810 63.158 16.34 2.67 0.00 5.14
2338 2773 1.810030 GGGACAAAGTAGCGCTCCG 60.810 63.158 16.34 0.90 0.00 4.63
2339 2774 0.741221 CAGGGACAAAGTAGCGCTCC 60.741 60.000 16.34 7.21 0.00 4.70
2340 2775 0.037232 ACAGGGACAAAGTAGCGCTC 60.037 55.000 16.34 5.88 0.00 5.03
2341 2776 0.396811 AACAGGGACAAAGTAGCGCT 59.603 50.000 17.26 17.26 0.00 5.92
2342 2777 1.235724 AAACAGGGACAAAGTAGCGC 58.764 50.000 0.00 0.00 0.00 5.92
2343 2778 2.604614 GCAAAACAGGGACAAAGTAGCG 60.605 50.000 0.00 0.00 0.00 4.26
2344 2779 2.604614 CGCAAAACAGGGACAAAGTAGC 60.605 50.000 0.00 0.00 0.00 3.58
2345 2780 2.604614 GCGCAAAACAGGGACAAAGTAG 60.605 50.000 0.30 0.00 0.00 2.57
2346 2781 1.335496 GCGCAAAACAGGGACAAAGTA 59.665 47.619 0.30 0.00 0.00 2.24
2347 2782 0.102300 GCGCAAAACAGGGACAAAGT 59.898 50.000 0.30 0.00 0.00 2.66
2348 2783 0.597377 GGCGCAAAACAGGGACAAAG 60.597 55.000 10.83 0.00 0.00 2.77
2349 2784 1.439644 GGCGCAAAACAGGGACAAA 59.560 52.632 10.83 0.00 0.00 2.83
2350 2785 2.840066 CGGCGCAAAACAGGGACAA 61.840 57.895 10.83 0.00 0.00 3.18
2351 2786 3.283684 CGGCGCAAAACAGGGACA 61.284 61.111 10.83 0.00 0.00 4.02
2352 2787 4.038080 CCGGCGCAAAACAGGGAC 62.038 66.667 10.83 0.00 0.00 4.46
2368 2803 4.496336 AGGGAGAAGCATGGCGCC 62.496 66.667 22.73 22.73 44.04 6.53
2369 2804 2.899339 GAGGGAGAAGCATGGCGC 60.899 66.667 0.00 0.00 42.91 6.53
2370 2805 2.203126 GGAGGGAGAAGCATGGCG 60.203 66.667 0.00 0.00 0.00 5.69
2371 2806 1.148048 GAGGAGGGAGAAGCATGGC 59.852 63.158 0.00 0.00 0.00 4.40
2372 2807 1.445095 CGAGGAGGGAGAAGCATGG 59.555 63.158 0.00 0.00 0.00 3.66
2373 2808 1.227497 GCGAGGAGGGAGAAGCATG 60.227 63.158 0.00 0.00 0.00 4.06
2374 2809 1.684386 CTGCGAGGAGGGAGAAGCAT 61.684 60.000 0.00 0.00 33.96 3.79
2375 2810 2.283894 TGCGAGGAGGGAGAAGCA 60.284 61.111 0.00 0.00 0.00 3.91
2376 2811 2.498726 CTGCGAGGAGGGAGAAGC 59.501 66.667 0.00 0.00 0.00 3.86
2377 2812 1.892819 TTGCTGCGAGGAGGGAGAAG 61.893 60.000 0.00 0.00 0.00 2.85
2378 2813 1.480212 TTTGCTGCGAGGAGGGAGAA 61.480 55.000 0.00 0.00 0.00 2.87
2379 2814 1.913262 TTTGCTGCGAGGAGGGAGA 60.913 57.895 0.00 0.00 0.00 3.71
2380 2815 1.743252 GTTTGCTGCGAGGAGGGAG 60.743 63.158 0.00 0.00 0.00 4.30
2381 2816 2.347490 GTTTGCTGCGAGGAGGGA 59.653 61.111 0.00 0.00 0.00 4.20
2382 2817 2.747855 GGTTTGCTGCGAGGAGGG 60.748 66.667 0.00 0.00 0.00 4.30
2383 2818 2.032528 TGGTTTGCTGCGAGGAGG 59.967 61.111 0.00 0.00 0.00 4.30
2384 2819 2.671177 CGTGGTTTGCTGCGAGGAG 61.671 63.158 0.00 0.00 0.00 3.69
2385 2820 2.664851 CGTGGTTTGCTGCGAGGA 60.665 61.111 0.00 0.00 0.00 3.71
2386 2821 2.664851 TCGTGGTTTGCTGCGAGG 60.665 61.111 0.00 0.00 0.00 4.63
2387 2822 2.551270 GTCGTGGTTTGCTGCGAG 59.449 61.111 0.00 0.00 33.90 5.03
2388 2823 3.334751 CGTCGTGGTTTGCTGCGA 61.335 61.111 0.00 0.00 0.00 5.10
2389 2824 3.281751 CTCGTCGTGGTTTGCTGCG 62.282 63.158 0.00 0.00 0.00 5.18
2390 2825 2.551270 CTCGTCGTGGTTTGCTGC 59.449 61.111 0.00 0.00 0.00 5.25
2391 2826 1.300620 TCCTCGTCGTGGTTTGCTG 60.301 57.895 12.76 0.00 0.00 4.41
2392 2827 1.300697 GTCCTCGTCGTGGTTTGCT 60.301 57.895 12.76 0.00 0.00 3.91
2393 2828 2.315386 GGTCCTCGTCGTGGTTTGC 61.315 63.158 12.76 3.18 0.00 3.68
2394 2829 2.019951 CGGTCCTCGTCGTGGTTTG 61.020 63.158 12.76 1.06 0.00 2.93
2395 2830 2.337532 CGGTCCTCGTCGTGGTTT 59.662 61.111 12.76 0.00 0.00 3.27
2396 2831 4.353437 GCGGTCCTCGTCGTGGTT 62.353 66.667 12.76 0.00 41.72 3.67
2401 2836 3.750077 TATTTTGGGCGGTCCTCGTCG 62.750 57.143 0.00 0.00 45.78 5.12
2402 2837 0.108041 TATTTTGGGCGGTCCTCGTC 60.108 55.000 0.00 0.00 43.79 4.20
2403 2838 0.107848 CTATTTTGGGCGGTCCTCGT 60.108 55.000 0.00 0.00 41.72 4.18
2404 2839 0.177141 TCTATTTTGGGCGGTCCTCG 59.823 55.000 0.00 0.00 42.76 4.63
2405 2840 2.158813 TGATCTATTTTGGGCGGTCCTC 60.159 50.000 0.00 0.00 36.20 3.71
2406 2841 1.843851 TGATCTATTTTGGGCGGTCCT 59.156 47.619 0.00 0.00 36.20 3.85
2407 2842 1.947456 GTGATCTATTTTGGGCGGTCC 59.053 52.381 0.00 0.00 0.00 4.46
2408 2843 2.614057 CAGTGATCTATTTTGGGCGGTC 59.386 50.000 0.00 0.00 0.00 4.79
2409 2844 2.026262 ACAGTGATCTATTTTGGGCGGT 60.026 45.455 0.00 0.00 0.00 5.68
2410 2845 2.355756 CACAGTGATCTATTTTGGGCGG 59.644 50.000 0.00 0.00 0.00 6.13
2411 2846 2.223340 GCACAGTGATCTATTTTGGGCG 60.223 50.000 4.15 0.00 0.00 6.13
2412 2847 2.223340 CGCACAGTGATCTATTTTGGGC 60.223 50.000 4.15 0.00 34.92 5.36
2413 2848 2.355756 CCGCACAGTGATCTATTTTGGG 59.644 50.000 4.15 0.00 0.00 4.12
2414 2849 3.270027 TCCGCACAGTGATCTATTTTGG 58.730 45.455 4.15 0.00 0.00 3.28
2415 2850 3.310774 CCTCCGCACAGTGATCTATTTTG 59.689 47.826 4.15 0.00 0.00 2.44
2416 2851 3.055094 ACCTCCGCACAGTGATCTATTTT 60.055 43.478 4.15 0.00 0.00 1.82
2417 2852 2.501723 ACCTCCGCACAGTGATCTATTT 59.498 45.455 4.15 0.00 0.00 1.40
2418 2853 2.111384 ACCTCCGCACAGTGATCTATT 58.889 47.619 4.15 0.00 0.00 1.73
2419 2854 1.410517 CACCTCCGCACAGTGATCTAT 59.589 52.381 4.15 0.00 33.21 1.98
2420 2855 0.817654 CACCTCCGCACAGTGATCTA 59.182 55.000 4.15 0.00 33.21 1.98
2421 2856 1.593787 CACCTCCGCACAGTGATCT 59.406 57.895 4.15 0.00 33.21 2.75
2422 2857 2.103042 GCACCTCCGCACAGTGATC 61.103 63.158 4.15 0.00 33.21 2.92
2423 2858 2.046892 GCACCTCCGCACAGTGAT 60.047 61.111 4.15 0.00 33.21 3.06
2424 2859 4.314440 GGCACCTCCGCACAGTGA 62.314 66.667 4.15 0.00 33.21 3.41
2425 2860 3.832237 AAGGCACCTCCGCACAGTG 62.832 63.158 0.00 0.00 40.77 3.66
2426 2861 3.560251 AAGGCACCTCCGCACAGT 61.560 61.111 0.00 0.00 40.77 3.55
2427 2862 3.052082 CAAGGCACCTCCGCACAG 61.052 66.667 0.00 0.00 40.77 3.66
2432 2867 4.711949 AGCAGCAAGGCACCTCCG 62.712 66.667 0.00 0.00 40.77 4.63
2433 2868 3.060615 CAGCAGCAAGGCACCTCC 61.061 66.667 0.00 0.00 35.83 4.30
2434 2869 3.745803 GCAGCAGCAAGGCACCTC 61.746 66.667 0.00 0.00 41.58 3.85
2444 2879 2.490217 CATGGAGCTTGCAGCAGC 59.510 61.111 1.95 1.95 45.56 5.25
2445 2880 3.064987 GCCATGGAGCTTGCAGCAG 62.065 63.158 18.40 0.00 45.56 4.24
2446 2881 3.066190 GCCATGGAGCTTGCAGCA 61.066 61.111 18.40 0.00 45.56 4.41
2447 2882 3.834799 GGCCATGGAGCTTGCAGC 61.835 66.667 18.40 0.00 42.84 5.25
2448 2883 2.361992 TGGCCATGGAGCTTGCAG 60.362 61.111 18.40 0.00 0.00 4.41
2449 2884 2.219449 ATCTGGCCATGGAGCTTGCA 62.219 55.000 18.40 0.00 0.00 4.08
2450 2885 1.041447 AATCTGGCCATGGAGCTTGC 61.041 55.000 18.40 0.00 0.00 4.01
2451 2886 1.481871 AAATCTGGCCATGGAGCTTG 58.518 50.000 18.40 0.00 0.00 4.01
2452 2887 3.139770 AGATAAATCTGGCCATGGAGCTT 59.860 43.478 18.40 0.00 35.42 3.74
2453 2888 2.715336 AGATAAATCTGGCCATGGAGCT 59.285 45.455 18.40 0.00 35.42 4.09
2454 2889 3.151912 AGATAAATCTGGCCATGGAGC 57.848 47.619 18.40 0.00 35.42 4.70
2476 2911 3.589881 GCCATGGCCTGCGCTAAG 61.590 66.667 27.24 0.00 34.44 2.18
2486 2921 3.025619 CTCGAATTCGGCCATGGC 58.974 61.111 29.47 29.47 40.29 4.40
2487 2922 3.025619 GCTCGAATTCGGCCATGG 58.974 61.111 26.47 7.63 40.29 3.66
2492 2927 1.264288 CCTAAATGGCTCGAATTCGGC 59.736 52.381 26.47 25.22 40.29 5.54
2493 2928 2.833794 TCCTAAATGGCTCGAATTCGG 58.166 47.619 26.47 17.90 36.41 4.30
2494 2929 4.260784 CCTTTCCTAAATGGCTCGAATTCG 60.261 45.833 21.78 21.78 36.83 3.34
2495 2930 4.036852 CCCTTTCCTAAATGGCTCGAATTC 59.963 45.833 0.00 0.00 35.26 2.17
2496 2931 3.954258 CCCTTTCCTAAATGGCTCGAATT 59.046 43.478 0.00 0.00 35.26 2.17
2497 2932 3.202151 TCCCTTTCCTAAATGGCTCGAAT 59.798 43.478 0.00 0.00 35.26 3.34
2498 2933 2.574369 TCCCTTTCCTAAATGGCTCGAA 59.426 45.455 0.00 0.00 35.26 3.71
2499 2934 2.193127 TCCCTTTCCTAAATGGCTCGA 58.807 47.619 0.00 0.00 35.26 4.04
2500 2935 2.710096 TCCCTTTCCTAAATGGCTCG 57.290 50.000 0.00 0.00 35.26 5.03
2501 2936 5.939764 AAAATCCCTTTCCTAAATGGCTC 57.060 39.130 0.00 0.00 35.26 4.70
2523 2958 1.169661 ACTCGTCCATGGCGCAAAAA 61.170 50.000 19.64 5.54 0.00 1.94
2524 2959 1.169661 AACTCGTCCATGGCGCAAAA 61.170 50.000 19.64 0.00 0.00 2.44
2525 2960 1.599518 AACTCGTCCATGGCGCAAA 60.600 52.632 19.64 0.00 0.00 3.68
2526 2961 2.031919 AACTCGTCCATGGCGCAA 59.968 55.556 19.64 0.00 0.00 4.85
2527 2962 2.741985 CAACTCGTCCATGGCGCA 60.742 61.111 19.64 10.46 0.00 6.09
2528 2963 4.166011 GCAACTCGTCCATGGCGC 62.166 66.667 19.64 0.00 0.00 6.53
2529 2964 1.148157 CTAGCAACTCGTCCATGGCG 61.148 60.000 18.73 18.73 0.00 5.69
2530 2965 0.108138 ACTAGCAACTCGTCCATGGC 60.108 55.000 6.96 0.96 0.00 4.40
2531 2966 1.204704 TCACTAGCAACTCGTCCATGG 59.795 52.381 4.97 4.97 0.00 3.66
2532 2967 2.263077 GTCACTAGCAACTCGTCCATG 58.737 52.381 0.00 0.00 0.00 3.66
2533 2968 1.135373 CGTCACTAGCAACTCGTCCAT 60.135 52.381 0.00 0.00 0.00 3.41
2534 2969 0.240145 CGTCACTAGCAACTCGTCCA 59.760 55.000 0.00 0.00 0.00 4.02
2535 2970 0.240411 ACGTCACTAGCAACTCGTCC 59.760 55.000 0.00 0.00 0.00 4.79
2536 2971 2.047679 AACGTCACTAGCAACTCGTC 57.952 50.000 0.00 0.00 0.00 4.20
2537 2972 3.631145 TTAACGTCACTAGCAACTCGT 57.369 42.857 0.00 0.00 0.00 4.18
2538 2973 3.303495 CCATTAACGTCACTAGCAACTCG 59.697 47.826 0.00 0.00 0.00 4.18
2539 2974 4.842139 CCATTAACGTCACTAGCAACTC 57.158 45.455 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.