Multiple sequence alignment - TraesCS3A01G261100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G261100 chr3A 100.000 2909 0 0 1 2909 484099793 484102701 0.000000e+00 5373.0
1 TraesCS3A01G261100 chr3A 92.816 348 24 1 36 382 484094646 484094993 1.200000e-138 503.0
2 TraesCS3A01G261100 chr3B 88.510 1993 91 68 379 2329 473176794 473178690 0.000000e+00 2285.0
3 TraesCS3A01G261100 chr3B 85.103 584 51 13 2329 2905 473180186 473180740 5.440000e-157 564.0
4 TraesCS3A01G261100 chr3B 92.353 340 26 0 39 378 824146263 824145924 4.360000e-133 484.0
5 TraesCS3A01G261100 chr3B 92.353 340 26 0 39 378 824171340 824171001 4.360000e-133 484.0
6 TraesCS3A01G261100 chr3B 91.884 345 27 1 39 382 672848849 672848505 5.640000e-132 481.0
7 TraesCS3A01G261100 chr3B 93.750 64 1 3 3 65 746255212 746255273 3.090000e-15 93.5
8 TraesCS3A01G261100 chr3D 89.566 1706 70 42 698 2329 363263429 363265100 0.000000e+00 2065.0
9 TraesCS3A01G261100 chr3D 82.205 517 41 18 2331 2828 363265708 363266192 5.840000e-107 398.0
10 TraesCS3A01G261100 chr3D 87.500 264 11 6 379 632 363263176 363263427 4.740000e-73 285.0
11 TraesCS3A01G261100 chr2A 91.361 382 31 2 3 382 677857896 677857515 3.320000e-144 521.0
12 TraesCS3A01G261100 chr7B 91.954 348 28 0 39 386 670224957 670224610 3.370000e-134 488.0
13 TraesCS3A01G261100 chr6D 92.353 340 26 0 39 378 17027456 17027117 4.360000e-133 484.0
14 TraesCS3A01G261100 chr6D 98.214 56 0 1 3 57 29918445 29918390 2.390000e-16 97.1
15 TraesCS3A01G261100 chr6D 98.214 56 0 1 3 57 262298677 262298732 2.390000e-16 97.1
16 TraesCS3A01G261100 chr7D 92.035 339 27 0 39 377 420745070 420744732 7.290000e-131 477.0
17 TraesCS3A01G261100 chr5D 91.117 349 29 2 36 382 559885831 559886179 3.390000e-129 472.0
18 TraesCS3A01G261100 chr4B 98.276 58 0 1 1 57 426052802 426052745 1.840000e-17 100.0
19 TraesCS3A01G261100 chr4D 98.246 57 0 1 3 58 500612564 500612508 6.630000e-17 99.0
20 TraesCS3A01G261100 chr2D 98.246 57 0 1 3 58 419806217 419806273 6.630000e-17 99.0
21 TraesCS3A01G261100 chr1B 98.246 57 0 1 3 58 435133288 435133344 6.630000e-17 99.0
22 TraesCS3A01G261100 chr4A 93.750 64 1 2 3 65 714990811 714990872 3.090000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G261100 chr3A 484099793 484102701 2908 False 5373.0 5373 100.000000 1 2909 1 chr3A.!!$F2 2908
1 TraesCS3A01G261100 chr3B 473176794 473180740 3946 False 1424.5 2285 86.806500 379 2905 2 chr3B.!!$F2 2526
2 TraesCS3A01G261100 chr3D 363263176 363266192 3016 False 916.0 2065 86.423667 379 2828 3 chr3D.!!$F1 2449

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 93 0.036010 CCGATTCCAAGTCCAGTGCT 60.036 55.0 0.0 0.0 0.0 4.40 F
687 703 0.039074 CCGAGCACTACCATCCGATC 60.039 60.0 0.0 0.0 0.0 3.69 F
698 714 0.108851 CATCCGATCACACCGTCACA 60.109 55.0 0.0 0.0 0.0 3.58 F
1714 1785 0.036858 GTGCGGCCTCTTTCTCTTCT 60.037 55.0 0.0 0.0 0.0 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1588 1654 0.606944 CCTATCTCCTCCGGTCCTCG 60.607 65.0 0.00 0.00 38.88 4.63 R
1594 1660 0.961358 CCGCTACCTATCTCCTCCGG 60.961 65.0 0.00 0.00 0.00 5.14 R
1740 1831 1.069378 CACTAACCGACGGCGAGAAC 61.069 60.0 15.16 0.69 40.82 3.01 R
2841 4626 0.977395 GAAGTATATGCCTCCCCGCT 59.023 55.0 0.00 0.00 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.086199 GTCTACTGACTTCTTCTCACGG 57.914 50.000 0.00 0.00 39.94 4.94
22 23 3.752222 GTCTACTGACTTCTTCTCACGGA 59.248 47.826 0.00 0.00 39.94 4.69
23 24 3.752222 TCTACTGACTTCTTCTCACGGAC 59.248 47.826 0.00 0.00 0.00 4.79
24 25 1.267261 ACTGACTTCTTCTCACGGACG 59.733 52.381 0.00 0.00 0.00 4.79
25 26 0.039437 TGACTTCTTCTCACGGACGC 60.039 55.000 0.00 0.00 0.00 5.19
26 27 0.733223 GACTTCTTCTCACGGACGCC 60.733 60.000 0.00 0.00 0.00 5.68
27 28 1.446272 CTTCTTCTCACGGACGCCC 60.446 63.158 0.00 0.00 0.00 6.13
28 29 2.837371 CTTCTTCTCACGGACGCCCC 62.837 65.000 0.00 0.00 0.00 5.80
48 49 0.731994 GGACTCCGACGACTACTTCC 59.268 60.000 0.00 0.00 0.00 3.46
49 50 0.731994 GACTCCGACGACTACTTCCC 59.268 60.000 0.00 0.00 0.00 3.97
50 51 0.679321 ACTCCGACGACTACTTCCCC 60.679 60.000 0.00 0.00 0.00 4.81
51 52 1.712977 CTCCGACGACTACTTCCCCG 61.713 65.000 0.00 0.00 0.00 5.73
52 53 1.746615 CCGACGACTACTTCCCCGA 60.747 63.158 0.00 0.00 0.00 5.14
53 54 1.427020 CGACGACTACTTCCCCGAC 59.573 63.158 0.00 0.00 0.00 4.79
54 55 1.427020 GACGACTACTTCCCCGACG 59.573 63.158 0.00 0.00 0.00 5.12
55 56 1.003355 ACGACTACTTCCCCGACGA 60.003 57.895 0.00 0.00 0.00 4.20
56 57 1.301677 ACGACTACTTCCCCGACGAC 61.302 60.000 0.00 0.00 0.00 4.34
57 58 1.300971 CGACTACTTCCCCGACGACA 61.301 60.000 0.00 0.00 0.00 4.35
58 59 1.101331 GACTACTTCCCCGACGACAT 58.899 55.000 0.00 0.00 0.00 3.06
59 60 0.815734 ACTACTTCCCCGACGACATG 59.184 55.000 0.00 0.00 0.00 3.21
60 61 0.102481 CTACTTCCCCGACGACATGG 59.898 60.000 0.00 0.00 0.00 3.66
61 62 1.952102 TACTTCCCCGACGACATGGC 61.952 60.000 0.00 0.00 0.00 4.40
62 63 3.000819 TTCCCCGACGACATGGCT 61.001 61.111 0.00 0.00 0.00 4.75
63 64 1.672854 CTTCCCCGACGACATGGCTA 61.673 60.000 0.00 0.00 0.00 3.93
64 65 1.952102 TTCCCCGACGACATGGCTAC 61.952 60.000 0.00 0.00 0.00 3.58
65 66 2.106332 CCCGACGACATGGCTACC 59.894 66.667 0.00 0.00 0.00 3.18
66 67 2.278596 CCGACGACATGGCTACCG 60.279 66.667 0.00 0.00 0.00 4.02
67 68 2.767445 CCGACGACATGGCTACCGA 61.767 63.158 0.00 0.00 0.00 4.69
68 69 1.298413 CGACGACATGGCTACCGAG 60.298 63.158 0.00 0.00 0.00 4.63
69 70 1.065928 GACGACATGGCTACCGAGG 59.934 63.158 0.00 0.00 0.00 4.63
70 71 1.379443 ACGACATGGCTACCGAGGA 60.379 57.895 0.00 0.00 0.00 3.71
71 72 1.065928 CGACATGGCTACCGAGGAC 59.934 63.158 0.00 0.00 0.00 3.85
72 73 1.663379 CGACATGGCTACCGAGGACA 61.663 60.000 0.00 0.00 0.00 4.02
73 74 0.179108 GACATGGCTACCGAGGACAC 60.179 60.000 0.00 0.00 0.00 3.67
74 75 1.144057 CATGGCTACCGAGGACACC 59.856 63.158 0.00 0.00 0.00 4.16
75 76 2.423898 ATGGCTACCGAGGACACCG 61.424 63.158 0.00 0.00 0.00 4.94
76 77 2.753043 GGCTACCGAGGACACCGA 60.753 66.667 0.00 0.00 0.00 4.69
77 78 2.125961 GGCTACCGAGGACACCGAT 61.126 63.158 0.00 0.00 0.00 4.18
78 79 1.673808 GGCTACCGAGGACACCGATT 61.674 60.000 0.00 0.00 0.00 3.34
79 80 0.248949 GCTACCGAGGACACCGATTC 60.249 60.000 0.00 0.00 0.00 2.52
80 81 0.384669 CTACCGAGGACACCGATTCC 59.615 60.000 0.00 0.00 0.00 3.01
81 82 0.323633 TACCGAGGACACCGATTCCA 60.324 55.000 0.00 0.00 35.33 3.53
82 83 1.189524 ACCGAGGACACCGATTCCAA 61.190 55.000 0.00 0.00 35.33 3.53
83 84 0.460284 CCGAGGACACCGATTCCAAG 60.460 60.000 0.00 0.00 35.33 3.61
84 85 0.246635 CGAGGACACCGATTCCAAGT 59.753 55.000 0.00 0.00 35.33 3.16
85 86 1.736032 CGAGGACACCGATTCCAAGTC 60.736 57.143 0.00 0.00 35.33 3.01
86 87 3.154589 GGACACCGATTCCAAGTCC 57.845 57.895 0.00 0.00 41.59 3.85
87 88 0.323629 GGACACCGATTCCAAGTCCA 59.676 55.000 0.00 0.00 46.15 4.02
88 89 1.676014 GGACACCGATTCCAAGTCCAG 60.676 57.143 0.00 0.00 46.15 3.86
89 90 1.002087 GACACCGATTCCAAGTCCAGT 59.998 52.381 0.00 0.00 0.00 4.00
90 91 1.270839 ACACCGATTCCAAGTCCAGTG 60.271 52.381 0.00 0.00 0.00 3.66
91 92 0.321653 ACCGATTCCAAGTCCAGTGC 60.322 55.000 0.00 0.00 0.00 4.40
92 93 0.036010 CCGATTCCAAGTCCAGTGCT 60.036 55.000 0.00 0.00 0.00 4.40
93 94 1.207089 CCGATTCCAAGTCCAGTGCTA 59.793 52.381 0.00 0.00 0.00 3.49
94 95 2.271800 CGATTCCAAGTCCAGTGCTAC 58.728 52.381 0.00 0.00 0.00 3.58
95 96 2.093973 CGATTCCAAGTCCAGTGCTACT 60.094 50.000 0.00 0.00 0.00 2.57
96 97 2.839486 TTCCAAGTCCAGTGCTACTG 57.161 50.000 8.73 8.73 45.53 2.74
97 98 1.717032 TCCAAGTCCAGTGCTACTGT 58.283 50.000 13.06 0.00 44.50 3.55
98 99 2.047061 TCCAAGTCCAGTGCTACTGTT 58.953 47.619 13.06 1.88 44.50 3.16
99 100 2.146342 CCAAGTCCAGTGCTACTGTTG 58.854 52.381 13.06 10.98 44.50 3.33
100 101 1.532868 CAAGTCCAGTGCTACTGTTGC 59.467 52.381 7.29 7.29 44.50 4.17
101 102 1.051812 AGTCCAGTGCTACTGTTGCT 58.948 50.000 14.81 6.95 44.50 3.91
102 103 1.151668 GTCCAGTGCTACTGTTGCTG 58.848 55.000 14.81 6.21 44.50 4.41
103 104 0.603707 TCCAGTGCTACTGTTGCTGC 60.604 55.000 14.81 8.17 44.50 5.25
104 105 0.604780 CCAGTGCTACTGTTGCTGCT 60.605 55.000 14.81 10.06 44.50 4.24
105 106 0.516001 CAGTGCTACTGTTGCTGCTG 59.484 55.000 14.81 16.61 41.19 4.41
106 107 0.107456 AGTGCTACTGTTGCTGCTGT 59.893 50.000 14.81 0.00 0.00 4.40
107 108 0.947244 GTGCTACTGTTGCTGCTGTT 59.053 50.000 14.81 0.00 0.00 3.16
108 109 0.946528 TGCTACTGTTGCTGCTGTTG 59.053 50.000 14.81 0.00 0.00 3.33
109 110 0.947244 GCTACTGTTGCTGCTGTTGT 59.053 50.000 6.98 0.00 0.00 3.32
110 111 1.069636 GCTACTGTTGCTGCTGTTGTC 60.070 52.381 6.98 0.00 0.00 3.18
111 112 1.532868 CTACTGTTGCTGCTGTTGTCC 59.467 52.381 0.00 0.00 0.00 4.02
112 113 1.103398 ACTGTTGCTGCTGTTGTCCC 61.103 55.000 0.00 0.00 0.00 4.46
113 114 1.077140 TGTTGCTGCTGTTGTCCCA 60.077 52.632 0.00 0.00 0.00 4.37
114 115 0.467844 TGTTGCTGCTGTTGTCCCAT 60.468 50.000 0.00 0.00 0.00 4.00
115 116 1.202867 TGTTGCTGCTGTTGTCCCATA 60.203 47.619 0.00 0.00 0.00 2.74
116 117 1.200020 GTTGCTGCTGTTGTCCCATAC 59.800 52.381 0.00 0.00 0.00 2.39
117 118 0.673333 TGCTGCTGTTGTCCCATACG 60.673 55.000 0.00 0.00 0.00 3.06
118 119 0.673644 GCTGCTGTTGTCCCATACGT 60.674 55.000 0.00 0.00 0.00 3.57
119 120 1.078709 CTGCTGTTGTCCCATACGTG 58.921 55.000 0.00 0.00 0.00 4.49
120 121 0.394938 TGCTGTTGTCCCATACGTGT 59.605 50.000 0.00 0.00 0.00 4.49
121 122 1.202710 TGCTGTTGTCCCATACGTGTT 60.203 47.619 0.00 0.00 0.00 3.32
122 123 1.463444 GCTGTTGTCCCATACGTGTTC 59.537 52.381 0.00 0.00 0.00 3.18
123 124 2.870435 GCTGTTGTCCCATACGTGTTCT 60.870 50.000 0.00 0.00 0.00 3.01
124 125 3.399330 CTGTTGTCCCATACGTGTTCTT 58.601 45.455 0.00 0.00 0.00 2.52
125 126 3.135225 TGTTGTCCCATACGTGTTCTTG 58.865 45.455 0.00 0.00 0.00 3.02
126 127 3.135994 GTTGTCCCATACGTGTTCTTGT 58.864 45.455 0.00 0.00 0.00 3.16
127 128 3.478857 TGTCCCATACGTGTTCTTGTT 57.521 42.857 0.00 0.00 0.00 2.83
128 129 3.811083 TGTCCCATACGTGTTCTTGTTT 58.189 40.909 0.00 0.00 0.00 2.83
129 130 4.200874 TGTCCCATACGTGTTCTTGTTTT 58.799 39.130 0.00 0.00 0.00 2.43
130 131 4.641094 TGTCCCATACGTGTTCTTGTTTTT 59.359 37.500 0.00 0.00 0.00 1.94
150 151 6.920569 TTTTTCTGTTAGAGGTTCTGTCAC 57.079 37.500 0.00 0.00 0.00 3.67
151 152 5.607939 TTTCTGTTAGAGGTTCTGTCACA 57.392 39.130 0.00 0.00 0.00 3.58
152 153 4.855715 TCTGTTAGAGGTTCTGTCACAG 57.144 45.455 0.00 0.00 34.41 3.66
153 154 4.215908 TCTGTTAGAGGTTCTGTCACAGT 58.784 43.478 4.28 0.00 34.57 3.55
154 155 4.649674 TCTGTTAGAGGTTCTGTCACAGTT 59.350 41.667 4.28 0.00 34.57 3.16
155 156 4.945246 TGTTAGAGGTTCTGTCACAGTTC 58.055 43.478 4.28 0.00 32.61 3.01
156 157 4.202223 TGTTAGAGGTTCTGTCACAGTTCC 60.202 45.833 4.28 8.64 32.61 3.62
157 158 2.683768 AGAGGTTCTGTCACAGTTCCT 58.316 47.619 18.54 18.54 37.90 3.36
158 159 3.041946 AGAGGTTCTGTCACAGTTCCTT 58.958 45.455 19.17 10.32 36.50 3.36
159 160 3.134458 GAGGTTCTGTCACAGTTCCTTG 58.866 50.000 19.17 0.00 36.50 3.61
160 161 2.505819 AGGTTCTGTCACAGTTCCTTGT 59.494 45.455 14.65 0.00 34.41 3.16
161 162 3.054361 AGGTTCTGTCACAGTTCCTTGTT 60.054 43.478 14.65 0.00 34.41 2.83
162 163 3.312697 GGTTCTGTCACAGTTCCTTGTTC 59.687 47.826 4.28 0.00 32.61 3.18
163 164 4.192317 GTTCTGTCACAGTTCCTTGTTCT 58.808 43.478 4.28 0.00 32.61 3.01
164 165 5.357257 GTTCTGTCACAGTTCCTTGTTCTA 58.643 41.667 4.28 0.00 32.61 2.10
165 166 5.201713 TCTGTCACAGTTCCTTGTTCTAG 57.798 43.478 4.28 0.00 32.61 2.43
166 167 4.649674 TCTGTCACAGTTCCTTGTTCTAGT 59.350 41.667 4.28 0.00 32.61 2.57
167 168 4.945246 TGTCACAGTTCCTTGTTCTAGTC 58.055 43.478 0.00 0.00 0.00 2.59
168 169 4.649674 TGTCACAGTTCCTTGTTCTAGTCT 59.350 41.667 0.00 0.00 0.00 3.24
169 170 5.128827 TGTCACAGTTCCTTGTTCTAGTCTT 59.871 40.000 0.00 0.00 0.00 3.01
170 171 6.049790 GTCACAGTTCCTTGTTCTAGTCTTT 58.950 40.000 0.00 0.00 0.00 2.52
171 172 6.018669 GTCACAGTTCCTTGTTCTAGTCTTTG 60.019 42.308 0.00 0.00 0.00 2.77
172 173 4.816925 ACAGTTCCTTGTTCTAGTCTTTGC 59.183 41.667 0.00 0.00 0.00 3.68
173 174 4.214332 CAGTTCCTTGTTCTAGTCTTTGCC 59.786 45.833 0.00 0.00 0.00 4.52
174 175 3.418684 TCCTTGTTCTAGTCTTTGCCC 57.581 47.619 0.00 0.00 0.00 5.36
175 176 2.979678 TCCTTGTTCTAGTCTTTGCCCT 59.020 45.455 0.00 0.00 0.00 5.19
176 177 4.164981 TCCTTGTTCTAGTCTTTGCCCTA 58.835 43.478 0.00 0.00 0.00 3.53
177 178 4.223032 TCCTTGTTCTAGTCTTTGCCCTAG 59.777 45.833 0.00 0.00 33.46 3.02
178 179 4.223032 CCTTGTTCTAGTCTTTGCCCTAGA 59.777 45.833 0.00 0.00 38.26 2.43
179 180 4.803098 TGTTCTAGTCTTTGCCCTAGAC 57.197 45.455 0.00 0.00 39.40 2.59
180 181 4.157246 TGTTCTAGTCTTTGCCCTAGACA 58.843 43.478 11.16 0.00 43.52 3.41
181 182 4.777896 TGTTCTAGTCTTTGCCCTAGACAT 59.222 41.667 11.16 1.97 43.52 3.06
182 183 5.112686 GTTCTAGTCTTTGCCCTAGACATG 58.887 45.833 11.16 0.00 43.52 3.21
183 184 4.610333 TCTAGTCTTTGCCCTAGACATGA 58.390 43.478 0.00 6.72 43.52 3.07
184 185 3.618690 AGTCTTTGCCCTAGACATGAC 57.381 47.619 0.00 0.00 43.52 3.06
185 186 2.906389 AGTCTTTGCCCTAGACATGACA 59.094 45.455 0.00 0.00 43.52 3.58
186 187 3.055530 AGTCTTTGCCCTAGACATGACAG 60.056 47.826 0.00 0.00 43.52 3.51
187 188 2.237143 TCTTTGCCCTAGACATGACAGG 59.763 50.000 0.00 2.23 0.00 4.00
188 189 1.656587 TTGCCCTAGACATGACAGGT 58.343 50.000 0.00 0.00 0.00 4.00
189 190 1.656587 TGCCCTAGACATGACAGGTT 58.343 50.000 0.00 0.00 0.00 3.50
190 191 1.555075 TGCCCTAGACATGACAGGTTC 59.445 52.381 0.00 0.00 0.00 3.62
191 192 1.834263 GCCCTAGACATGACAGGTTCT 59.166 52.381 0.00 0.00 0.00 3.01
192 193 3.031736 GCCCTAGACATGACAGGTTCTA 58.968 50.000 0.00 0.00 0.00 2.10
193 194 3.181474 GCCCTAGACATGACAGGTTCTAC 60.181 52.174 0.00 0.00 0.00 2.59
194 195 4.282496 CCCTAGACATGACAGGTTCTACT 58.718 47.826 0.00 0.00 0.00 2.57
195 196 4.712337 CCCTAGACATGACAGGTTCTACTT 59.288 45.833 0.00 0.00 0.00 2.24
196 197 5.163499 CCCTAGACATGACAGGTTCTACTTC 60.163 48.000 0.00 0.00 0.00 3.01
197 198 5.419155 CCTAGACATGACAGGTTCTACTTCA 59.581 44.000 0.00 0.00 0.00 3.02
198 199 6.097554 CCTAGACATGACAGGTTCTACTTCAT 59.902 42.308 0.00 0.00 0.00 2.57
199 200 7.285629 CCTAGACATGACAGGTTCTACTTCATA 59.714 40.741 0.00 0.00 0.00 2.15
200 201 7.667575 AGACATGACAGGTTCTACTTCATAT 57.332 36.000 0.00 0.00 0.00 1.78
201 202 8.768501 AGACATGACAGGTTCTACTTCATATA 57.231 34.615 0.00 0.00 0.00 0.86
202 203 9.373450 AGACATGACAGGTTCTACTTCATATAT 57.627 33.333 0.00 0.00 0.00 0.86
203 204 9.416794 GACATGACAGGTTCTACTTCATATATG 57.583 37.037 6.36 6.36 0.00 1.78
204 205 7.875041 ACATGACAGGTTCTACTTCATATATGC 59.125 37.037 7.92 0.00 0.00 3.14
205 206 7.360113 TGACAGGTTCTACTTCATATATGCA 57.640 36.000 7.92 0.00 0.00 3.96
206 207 7.791029 TGACAGGTTCTACTTCATATATGCAA 58.209 34.615 7.92 3.18 0.00 4.08
207 208 7.710907 TGACAGGTTCTACTTCATATATGCAAC 59.289 37.037 7.92 4.09 0.00 4.17
208 209 7.796054 ACAGGTTCTACTTCATATATGCAACT 58.204 34.615 7.92 0.00 0.00 3.16
209 210 8.267894 ACAGGTTCTACTTCATATATGCAACTT 58.732 33.333 7.92 0.00 0.00 2.66
210 211 8.554528 CAGGTTCTACTTCATATATGCAACTTG 58.445 37.037 7.92 6.55 0.00 3.16
211 212 7.716998 AGGTTCTACTTCATATATGCAACTTGG 59.283 37.037 7.92 0.00 0.00 3.61
212 213 7.499232 GGTTCTACTTCATATATGCAACTTGGT 59.501 37.037 7.92 0.00 0.00 3.67
213 214 8.552034 GTTCTACTTCATATATGCAACTTGGTC 58.448 37.037 7.92 0.00 0.00 4.02
214 215 8.023021 TCTACTTCATATATGCAACTTGGTCT 57.977 34.615 7.92 0.00 0.00 3.85
215 216 9.143155 TCTACTTCATATATGCAACTTGGTCTA 57.857 33.333 7.92 0.00 0.00 2.59
216 217 9.197694 CTACTTCATATATGCAACTTGGTCTAC 57.802 37.037 7.92 0.00 0.00 2.59
217 218 7.796054 ACTTCATATATGCAACTTGGTCTACT 58.204 34.615 7.92 0.00 0.00 2.57
218 219 7.712639 ACTTCATATATGCAACTTGGTCTACTG 59.287 37.037 7.92 0.00 0.00 2.74
219 220 7.124573 TCATATATGCAACTTGGTCTACTGT 57.875 36.000 7.92 0.00 0.00 3.55
220 221 7.210174 TCATATATGCAACTTGGTCTACTGTC 58.790 38.462 7.92 0.00 0.00 3.51
221 222 5.683876 ATATGCAACTTGGTCTACTGTCT 57.316 39.130 0.00 0.00 0.00 3.41
222 223 3.111853 TGCAACTTGGTCTACTGTCTG 57.888 47.619 0.00 0.00 0.00 3.51
223 224 1.801178 GCAACTTGGTCTACTGTCTGC 59.199 52.381 0.00 0.00 0.00 4.26
224 225 2.548920 GCAACTTGGTCTACTGTCTGCT 60.549 50.000 0.00 0.00 0.00 4.24
225 226 3.321497 CAACTTGGTCTACTGTCTGCTC 58.679 50.000 0.00 0.00 0.00 4.26
226 227 2.883026 ACTTGGTCTACTGTCTGCTCT 58.117 47.619 0.00 0.00 0.00 4.09
227 228 4.035612 ACTTGGTCTACTGTCTGCTCTA 57.964 45.455 0.00 0.00 0.00 2.43
228 229 4.013728 ACTTGGTCTACTGTCTGCTCTAG 58.986 47.826 0.00 0.00 0.00 2.43
229 230 4.263550 ACTTGGTCTACTGTCTGCTCTAGA 60.264 45.833 0.00 0.00 0.00 2.43
230 231 3.879998 TGGTCTACTGTCTGCTCTAGAG 58.120 50.000 15.85 15.85 35.70 2.43
231 232 3.519913 TGGTCTACTGTCTGCTCTAGAGA 59.480 47.826 24.24 7.73 35.70 3.10
232 233 4.165180 TGGTCTACTGTCTGCTCTAGAGAT 59.835 45.833 24.24 1.79 35.70 2.75
233 234 4.515191 GGTCTACTGTCTGCTCTAGAGATG 59.485 50.000 24.24 14.09 35.70 2.90
234 235 5.123227 GTCTACTGTCTGCTCTAGAGATGT 58.877 45.833 24.24 12.81 35.70 3.06
235 236 5.588648 GTCTACTGTCTGCTCTAGAGATGTT 59.411 44.000 24.24 2.78 35.70 2.71
236 237 6.094881 GTCTACTGTCTGCTCTAGAGATGTTT 59.905 42.308 24.24 3.28 35.70 2.83
237 238 5.070770 ACTGTCTGCTCTAGAGATGTTTG 57.929 43.478 24.24 10.60 35.70 2.93
238 239 4.769488 ACTGTCTGCTCTAGAGATGTTTGA 59.231 41.667 24.24 8.05 35.70 2.69
239 240 5.421693 ACTGTCTGCTCTAGAGATGTTTGAT 59.578 40.000 24.24 0.00 35.70 2.57
240 241 6.070881 ACTGTCTGCTCTAGAGATGTTTGATT 60.071 38.462 24.24 0.00 35.70 2.57
241 242 6.336566 TGTCTGCTCTAGAGATGTTTGATTC 58.663 40.000 24.24 1.96 35.70 2.52
242 243 6.154192 TGTCTGCTCTAGAGATGTTTGATTCT 59.846 38.462 24.24 0.00 35.70 2.40
243 244 7.340487 TGTCTGCTCTAGAGATGTTTGATTCTA 59.660 37.037 24.24 0.00 35.70 2.10
244 245 7.862372 GTCTGCTCTAGAGATGTTTGATTCTAG 59.138 40.741 24.24 1.87 40.15 2.43
245 246 7.559533 TCTGCTCTAGAGATGTTTGATTCTAGT 59.440 37.037 24.24 0.00 39.88 2.57
246 247 8.072321 TGCTCTAGAGATGTTTGATTCTAGTT 57.928 34.615 24.24 0.00 39.88 2.24
247 248 8.535335 TGCTCTAGAGATGTTTGATTCTAGTTT 58.465 33.333 24.24 0.00 39.88 2.66
278 279 9.653287 TTACAGATGTTATTTACCTTCACTCTG 57.347 33.333 0.00 0.00 34.15 3.35
279 280 7.680730 ACAGATGTTATTTACCTTCACTCTGT 58.319 34.615 0.00 0.00 35.91 3.41
280 281 7.819900 ACAGATGTTATTTACCTTCACTCTGTC 59.180 37.037 0.00 0.00 35.90 3.51
281 282 7.819415 CAGATGTTATTTACCTTCACTCTGTCA 59.181 37.037 0.00 0.00 0.00 3.58
282 283 8.037758 AGATGTTATTTACCTTCACTCTGTCAG 58.962 37.037 0.00 0.00 0.00 3.51
283 284 7.297936 TGTTATTTACCTTCACTCTGTCAGA 57.702 36.000 1.78 1.78 0.00 3.27
284 285 7.907389 TGTTATTTACCTTCACTCTGTCAGAT 58.093 34.615 2.22 0.00 0.00 2.90
285 286 8.035394 TGTTATTTACCTTCACTCTGTCAGATC 58.965 37.037 2.22 0.00 0.00 2.75
286 287 4.703645 TTACCTTCACTCTGTCAGATCG 57.296 45.455 2.22 0.00 0.00 3.69
287 288 1.203523 ACCTTCACTCTGTCAGATCGC 59.796 52.381 2.22 0.00 0.00 4.58
288 289 1.203287 CCTTCACTCTGTCAGATCGCA 59.797 52.381 2.22 0.00 0.00 5.10
289 290 2.159128 CCTTCACTCTGTCAGATCGCAT 60.159 50.000 2.22 0.00 0.00 4.73
290 291 2.573941 TCACTCTGTCAGATCGCATG 57.426 50.000 2.22 0.00 0.00 4.06
291 292 2.094675 TCACTCTGTCAGATCGCATGA 58.905 47.619 2.22 0.58 0.00 3.07
292 293 2.159324 TCACTCTGTCAGATCGCATGAC 60.159 50.000 2.22 6.63 45.88 3.06
293 294 2.098614 ACTCTGTCAGATCGCATGACT 58.901 47.619 13.05 0.00 45.87 3.41
294 295 2.495270 ACTCTGTCAGATCGCATGACTT 59.505 45.455 13.05 0.00 45.87 3.01
295 296 2.858941 CTCTGTCAGATCGCATGACTTG 59.141 50.000 13.05 7.56 45.87 3.16
296 297 2.232208 TCTGTCAGATCGCATGACTTGT 59.768 45.455 13.05 0.00 45.87 3.16
297 298 2.998670 CTGTCAGATCGCATGACTTGTT 59.001 45.455 13.05 0.00 45.87 2.83
298 299 2.995939 TGTCAGATCGCATGACTTGTTC 59.004 45.455 13.05 0.00 45.87 3.18
299 300 3.257393 GTCAGATCGCATGACTTGTTCT 58.743 45.455 0.00 0.00 43.03 3.01
300 301 4.082245 TGTCAGATCGCATGACTTGTTCTA 60.082 41.667 13.05 0.00 45.87 2.10
301 302 5.046529 GTCAGATCGCATGACTTGTTCTAT 58.953 41.667 0.00 0.00 43.03 1.98
302 303 5.174761 GTCAGATCGCATGACTTGTTCTATC 59.825 44.000 0.00 0.00 43.03 2.08
303 304 5.068329 TCAGATCGCATGACTTGTTCTATCT 59.932 40.000 0.00 0.00 0.00 1.98
304 305 5.401972 CAGATCGCATGACTTGTTCTATCTC 59.598 44.000 0.00 0.00 0.00 2.75
305 306 4.991153 TCGCATGACTTGTTCTATCTCT 57.009 40.909 0.00 0.00 0.00 3.10
306 307 4.676546 TCGCATGACTTGTTCTATCTCTG 58.323 43.478 0.00 0.00 0.00 3.35
307 308 3.244814 CGCATGACTTGTTCTATCTCTGC 59.755 47.826 0.00 0.00 0.00 4.26
308 309 4.440880 GCATGACTTGTTCTATCTCTGCT 58.559 43.478 0.00 0.00 0.00 4.24
309 310 5.595885 GCATGACTTGTTCTATCTCTGCTA 58.404 41.667 0.00 0.00 0.00 3.49
310 311 6.222389 GCATGACTTGTTCTATCTCTGCTAT 58.778 40.000 0.00 0.00 0.00 2.97
311 312 6.705381 GCATGACTTGTTCTATCTCTGCTATT 59.295 38.462 0.00 0.00 0.00 1.73
312 313 7.226325 GCATGACTTGTTCTATCTCTGCTATTT 59.774 37.037 0.00 0.00 0.00 1.40
313 314 9.107177 CATGACTTGTTCTATCTCTGCTATTTT 57.893 33.333 0.00 0.00 0.00 1.82
315 316 9.809096 TGACTTGTTCTATCTCTGCTATTTTAG 57.191 33.333 0.00 0.00 0.00 1.85
316 317 9.810545 GACTTGTTCTATCTCTGCTATTTTAGT 57.189 33.333 0.00 0.00 0.00 2.24
317 318 9.810545 ACTTGTTCTATCTCTGCTATTTTAGTC 57.189 33.333 0.00 0.00 0.00 2.59
318 319 9.809096 CTTGTTCTATCTCTGCTATTTTAGTCA 57.191 33.333 0.00 0.00 0.00 3.41
320 321 9.755804 TGTTCTATCTCTGCTATTTTAGTCATG 57.244 33.333 0.00 0.00 0.00 3.07
321 322 8.707839 GTTCTATCTCTGCTATTTTAGTCATGC 58.292 37.037 0.00 0.00 0.00 4.06
322 323 8.187913 TCTATCTCTGCTATTTTAGTCATGCT 57.812 34.615 0.00 0.00 0.00 3.79
323 324 8.646004 TCTATCTCTGCTATTTTAGTCATGCTT 58.354 33.333 0.00 0.00 0.00 3.91
324 325 9.270640 CTATCTCTGCTATTTTAGTCATGCTTT 57.729 33.333 0.00 0.00 0.00 3.51
326 327 9.790344 ATCTCTGCTATTTTAGTCATGCTTTAT 57.210 29.630 0.00 0.00 0.00 1.40
327 328 9.618890 TCTCTGCTATTTTAGTCATGCTTTATT 57.381 29.630 0.00 0.00 0.00 1.40
387 388 6.514541 GCTCATATTTCCAACATCCATGACAG 60.515 42.308 0.00 0.00 0.00 3.51
415 416 2.095466 TGACCAAATAAAAAGCGAGCGG 60.095 45.455 0.00 0.00 0.00 5.52
506 507 3.408853 GGCCACACCCCTACTCCC 61.409 72.222 0.00 0.00 0.00 4.30
507 508 3.782443 GCCACACCCCTACTCCCG 61.782 72.222 0.00 0.00 0.00 5.14
511 512 2.363361 CACCCCTACTCCCGTCCT 59.637 66.667 0.00 0.00 0.00 3.85
594 610 2.629051 GCTAATGTGTACACCTGGACC 58.371 52.381 22.91 3.99 0.00 4.46
595 611 2.236395 GCTAATGTGTACACCTGGACCT 59.764 50.000 22.91 0.84 0.00 3.85
596 612 2.859165 AATGTGTACACCTGGACCTG 57.141 50.000 22.91 0.00 0.00 4.00
597 613 0.984230 ATGTGTACACCTGGACCTGG 59.016 55.000 22.91 15.59 0.00 4.45
598 614 0.105401 TGTGTACACCTGGACCTGGA 60.105 55.000 23.36 0.00 0.00 3.86
599 615 0.320697 GTGTACACCTGGACCTGGAC 59.679 60.000 23.36 11.83 0.00 4.02
680 696 3.199071 ACAAAATATCCCGAGCACTACCA 59.801 43.478 0.00 0.00 0.00 3.25
681 697 4.141482 ACAAAATATCCCGAGCACTACCAT 60.141 41.667 0.00 0.00 0.00 3.55
682 698 3.963428 AATATCCCGAGCACTACCATC 57.037 47.619 0.00 0.00 0.00 3.51
683 699 1.629043 TATCCCGAGCACTACCATCC 58.371 55.000 0.00 0.00 0.00 3.51
684 700 1.464376 ATCCCGAGCACTACCATCCG 61.464 60.000 0.00 0.00 0.00 4.18
685 701 2.125326 CCCGAGCACTACCATCCGA 61.125 63.158 0.00 0.00 0.00 4.55
686 702 1.464376 CCCGAGCACTACCATCCGAT 61.464 60.000 0.00 0.00 0.00 4.18
687 703 0.039074 CCGAGCACTACCATCCGATC 60.039 60.000 0.00 0.00 0.00 3.69
697 713 0.806102 CCATCCGATCACACCGTCAC 60.806 60.000 0.00 0.00 0.00 3.67
698 714 0.108851 CATCCGATCACACCGTCACA 60.109 55.000 0.00 0.00 0.00 3.58
699 715 0.173481 ATCCGATCACACCGTCACAG 59.827 55.000 0.00 0.00 0.00 3.66
700 716 1.176619 TCCGATCACACCGTCACAGT 61.177 55.000 0.00 0.00 0.00 3.55
706 722 2.428491 TCACACCGTCACAGTTTTTGT 58.572 42.857 0.00 0.00 41.94 2.83
715 731 5.098893 CGTCACAGTTTTTGTTGGATCAAA 58.901 37.500 0.00 0.00 38.16 2.69
717 733 6.237542 CGTCACAGTTTTTGTTGGATCAAAAG 60.238 38.462 0.00 0.00 44.40 2.27
719 735 7.330700 GTCACAGTTTTTGTTGGATCAAAAGAA 59.669 33.333 0.00 0.00 44.40 2.52
720 736 7.875041 TCACAGTTTTTGTTGGATCAAAAGAAA 59.125 29.630 0.00 0.00 44.40 2.52
721 737 8.170553 CACAGTTTTTGTTGGATCAAAAGAAAG 58.829 33.333 0.00 0.00 44.40 2.62
722 738 7.334171 ACAGTTTTTGTTGGATCAAAAGAAAGG 59.666 33.333 0.00 0.00 44.40 3.11
723 739 7.548780 CAGTTTTTGTTGGATCAAAAGAAAGGA 59.451 33.333 0.00 0.00 44.40 3.36
724 740 7.765819 AGTTTTTGTTGGATCAAAAGAAAGGAG 59.234 33.333 0.00 0.00 44.40 3.69
725 741 4.853924 TGTTGGATCAAAAGAAAGGAGC 57.146 40.909 0.00 0.00 0.00 4.70
726 742 4.214310 TGTTGGATCAAAAGAAAGGAGCA 58.786 39.130 0.00 0.00 0.00 4.26
727 743 4.037923 TGTTGGATCAAAAGAAAGGAGCAC 59.962 41.667 0.00 0.00 0.00 4.40
728 744 4.104383 TGGATCAAAAGAAAGGAGCACT 57.896 40.909 0.00 0.00 0.00 4.40
733 749 4.074970 TCAAAAGAAAGGAGCACTGATCC 58.925 43.478 5.07 5.07 38.56 3.36
826 871 0.974383 AGACCCAGACCCGTAACAAG 59.026 55.000 0.00 0.00 0.00 3.16
828 873 0.974383 ACCCAGACCCGTAACAAGAG 59.026 55.000 0.00 0.00 0.00 2.85
843 888 8.596380 CCGTAACAAGAGTTTAATCAATCTCTC 58.404 37.037 0.00 0.00 39.06 3.20
921 969 6.828785 CCCTAGCTTAGCTTCCTTTTGATTTA 59.171 38.462 13.44 0.00 40.44 1.40
1035 1083 3.304324 GGAGCAGACAAAGTTTCTTGAGC 60.304 47.826 0.00 0.00 0.00 4.26
1123 1177 1.260206 CGTTCGAATCTCTCACACGG 58.740 55.000 0.00 0.00 0.00 4.94
1127 1181 2.160205 TCGAATCTCTCACACGGAACT 58.840 47.619 0.00 0.00 0.00 3.01
1193 1247 4.521062 CCGCTGCCGAGAAGGAGG 62.521 72.222 0.00 0.00 45.00 4.30
1538 1604 2.577059 GGACAATGGCGGACGAGA 59.423 61.111 0.00 0.00 0.00 4.04
1613 1679 2.557451 CGGAGGAGATAGGTAGCGG 58.443 63.158 0.00 0.00 0.00 5.52
1622 1688 4.501058 GGAGATAGGTAGCGGGTTTGTTAG 60.501 50.000 0.00 0.00 0.00 2.34
1623 1689 4.028825 AGATAGGTAGCGGGTTTGTTAGT 58.971 43.478 0.00 0.00 0.00 2.24
1624 1690 4.468868 AGATAGGTAGCGGGTTTGTTAGTT 59.531 41.667 0.00 0.00 0.00 2.24
1625 1691 3.497103 AGGTAGCGGGTTTGTTAGTTT 57.503 42.857 0.00 0.00 0.00 2.66
1706 1777 1.888436 TTCGATCTGTGCGGCCTCTT 61.888 55.000 0.00 0.00 0.00 2.85
1712 1783 0.321122 CTGTGCGGCCTCTTTCTCTT 60.321 55.000 0.00 0.00 0.00 2.85
1713 1784 0.320771 TGTGCGGCCTCTTTCTCTTC 60.321 55.000 0.00 0.00 0.00 2.87
1714 1785 0.036858 GTGCGGCCTCTTTCTCTTCT 60.037 55.000 0.00 0.00 0.00 2.85
1740 1831 4.910746 TTCGCTTTCTTTCATTCTCTCG 57.089 40.909 0.00 0.00 0.00 4.04
1800 1891 1.070821 GCCAGAAATTTCGGCAAAGC 58.929 50.000 31.36 19.07 42.40 3.51
1802 1893 2.753296 CCAGAAATTTCGGCAAAGCAA 58.247 42.857 12.42 0.00 0.00 3.91
1846 1938 2.870372 GCACCACATTGCCGAGTC 59.130 61.111 0.00 0.00 36.42 3.36
1847 1939 2.690778 GCACCACATTGCCGAGTCC 61.691 63.158 0.00 0.00 36.42 3.85
1848 1940 1.302431 CACCACATTGCCGAGTCCA 60.302 57.895 0.00 0.00 0.00 4.02
1849 1941 1.003355 ACCACATTGCCGAGTCCAG 60.003 57.895 0.00 0.00 0.00 3.86
1850 1942 1.296392 CCACATTGCCGAGTCCAGA 59.704 57.895 0.00 0.00 0.00 3.86
1851 1943 0.742281 CCACATTGCCGAGTCCAGAG 60.742 60.000 0.00 0.00 0.00 3.35
1852 1944 0.036952 CACATTGCCGAGTCCAGAGT 60.037 55.000 0.00 0.00 0.00 3.24
1853 1945 0.687354 ACATTGCCGAGTCCAGAGTT 59.313 50.000 0.00 0.00 0.00 3.01
1854 1946 1.072331 ACATTGCCGAGTCCAGAGTTT 59.928 47.619 0.00 0.00 0.00 2.66
1855 1947 2.154462 CATTGCCGAGTCCAGAGTTTT 58.846 47.619 0.00 0.00 0.00 2.43
1856 1948 1.878953 TTGCCGAGTCCAGAGTTTTC 58.121 50.000 0.00 0.00 0.00 2.29
1857 1949 0.756294 TGCCGAGTCCAGAGTTTTCA 59.244 50.000 0.00 0.00 0.00 2.69
1858 1950 1.140052 TGCCGAGTCCAGAGTTTTCAA 59.860 47.619 0.00 0.00 0.00 2.69
1859 1951 2.224523 TGCCGAGTCCAGAGTTTTCAAT 60.225 45.455 0.00 0.00 0.00 2.57
1860 1952 2.416893 GCCGAGTCCAGAGTTTTCAATC 59.583 50.000 0.00 0.00 0.00 2.67
1861 1953 3.866449 GCCGAGTCCAGAGTTTTCAATCT 60.866 47.826 0.00 0.00 0.00 2.40
1862 1954 4.620803 GCCGAGTCCAGAGTTTTCAATCTA 60.621 45.833 0.00 0.00 0.00 1.98
1863 1955 5.105752 CCGAGTCCAGAGTTTTCAATCTAG 58.894 45.833 0.00 0.00 0.00 2.43
1864 1956 5.105716 CCGAGTCCAGAGTTTTCAATCTAGA 60.106 44.000 0.00 0.00 0.00 2.43
1865 1957 6.406400 CCGAGTCCAGAGTTTTCAATCTAGAT 60.406 42.308 0.00 0.00 0.00 1.98
1866 1958 7.038659 CGAGTCCAGAGTTTTCAATCTAGATT 58.961 38.462 12.37 12.37 0.00 2.40
1868 1960 7.684529 AGTCCAGAGTTTTCAATCTAGATTGT 58.315 34.615 33.87 20.81 46.15 2.71
1869 1961 8.816894 AGTCCAGAGTTTTCAATCTAGATTGTA 58.183 33.333 33.87 26.39 46.15 2.41
1918 2054 0.598562 TGCGCCAAAAATAAAGCCGA 59.401 45.000 4.18 0.00 0.00 5.54
1919 2055 1.268265 GCGCCAAAAATAAAGCCGAG 58.732 50.000 0.00 0.00 0.00 4.63
1920 2056 1.268265 CGCCAAAAATAAAGCCGAGC 58.732 50.000 0.00 0.00 0.00 5.03
1921 2057 1.268265 GCCAAAAATAAAGCCGAGCG 58.732 50.000 0.00 0.00 0.00 5.03
1976 2112 4.594062 TCTGCCCTAAAAACACTGGTAGTA 59.406 41.667 0.00 0.00 31.62 1.82
1977 2113 5.249852 TCTGCCCTAAAAACACTGGTAGTAT 59.750 40.000 0.00 0.00 31.62 2.12
1978 2114 5.250200 TGCCCTAAAAACACTGGTAGTATG 58.750 41.667 0.00 0.00 0.00 2.39
1981 2119 5.190677 CCTAAAAACACTGGTAGTATGGGG 58.809 45.833 0.00 0.00 0.00 4.96
1994 2132 4.443978 AGTATGGGGATCACAGGATTTG 57.556 45.455 0.00 0.00 32.67 2.32
2100 2238 4.988540 TCGTCAGTTAAGAGTCAAACATGG 59.011 41.667 10.07 1.70 0.00 3.66
2126 2264 8.238631 GGAGCCATTATTAAACAACGTCTTAAA 58.761 33.333 0.00 0.00 0.00 1.52
2127 2265 9.615295 GAGCCATTATTAAACAACGTCTTAAAA 57.385 29.630 0.00 0.00 0.00 1.52
2166 2304 6.546403 TGAGAGGCCACTGTAATTACTAGTAG 59.454 42.308 7.70 11.55 0.00 2.57
2167 2305 6.433441 AGAGGCCACTGTAATTACTAGTAGT 58.567 40.000 16.33 8.14 0.00 2.73
2168 2306 7.580910 AGAGGCCACTGTAATTACTAGTAGTA 58.419 38.462 16.33 5.90 0.00 1.82
2169 2307 7.501892 AGAGGCCACTGTAATTACTAGTAGTAC 59.498 40.741 16.33 14.54 28.93 2.73
2170 2308 7.352738 AGGCCACTGTAATTACTAGTAGTACT 58.647 38.462 16.33 8.14 28.93 2.73
2213 2352 0.037697 TGACACGGCGAGCAGTTAAT 60.038 50.000 16.62 0.00 0.00 1.40
2333 4097 7.604657 ATCCTAGTTTTGGAGTATCACCTAG 57.395 40.000 0.00 0.00 36.99 3.02
2342 4106 6.466885 TGGAGTATCACCTAGCTAGAAAAC 57.533 41.667 22.70 11.86 36.25 2.43
2359 4123 2.146073 AACACTTTGGAGCATGGCGC 62.146 55.000 0.00 0.00 42.91 6.53
2361 4125 1.679977 ACTTTGGAGCATGGCGCAT 60.680 52.632 10.83 0.00 46.13 4.73
2362 4126 1.065273 CTTTGGAGCATGGCGCATC 59.935 57.895 10.83 0.00 46.13 3.91
2371 4135 3.740128 ATGGCGCATCCCACGAGTC 62.740 63.158 10.83 0.00 37.79 3.36
2384 4148 1.059838 CGAGTCGTCGTGATACGCA 59.940 57.895 3.82 0.00 42.21 5.24
2394 4158 2.101575 GATACGCAGGCACGACGA 59.898 61.111 0.00 0.00 35.62 4.20
2403 4167 3.188786 GCACGACGAGACATGGCC 61.189 66.667 0.00 0.00 0.00 5.36
2404 4168 2.261361 CACGACGAGACATGGCCA 59.739 61.111 8.56 8.56 0.00 5.36
2407 4171 2.887568 GACGAGACATGGCCAGCG 60.888 66.667 13.05 12.08 0.00 5.18
2410 4174 2.265739 GAGACATGGCCAGCGTCA 59.734 61.111 29.90 0.69 31.92 4.35
2503 4282 3.203716 GAGCATCATCACTTCATCAGCA 58.796 45.455 0.00 0.00 33.17 4.41
2645 4430 2.199236 CAGCGAACCGAGGGTAATAAC 58.801 52.381 0.00 0.00 33.12 1.89
2646 4431 1.826720 AGCGAACCGAGGGTAATAACA 59.173 47.619 0.00 0.00 33.12 2.41
2647 4432 2.234414 AGCGAACCGAGGGTAATAACAA 59.766 45.455 0.00 0.00 33.12 2.83
2648 4433 3.002102 GCGAACCGAGGGTAATAACAAA 58.998 45.455 0.00 0.00 33.12 2.83
2649 4434 3.624410 GCGAACCGAGGGTAATAACAAAT 59.376 43.478 0.00 0.00 33.12 2.32
2650 4435 4.810491 GCGAACCGAGGGTAATAACAAATA 59.190 41.667 0.00 0.00 33.12 1.40
2651 4436 5.294060 GCGAACCGAGGGTAATAACAAATAA 59.706 40.000 0.00 0.00 33.12 1.40
2652 4437 6.017687 GCGAACCGAGGGTAATAACAAATAAT 60.018 38.462 0.00 0.00 33.12 1.28
2653 4438 7.467675 GCGAACCGAGGGTAATAACAAATAATT 60.468 37.037 0.00 0.00 33.12 1.40
2654 4439 7.853929 CGAACCGAGGGTAATAACAAATAATTG 59.146 37.037 0.00 0.00 37.49 2.32
2655 4440 7.034685 ACCGAGGGTAATAACAAATAATTGC 57.965 36.000 0.00 0.00 35.33 3.56
2656 4441 6.831868 ACCGAGGGTAATAACAAATAATTGCT 59.168 34.615 0.00 0.00 35.33 3.91
2697 4482 2.049433 CGCTGTCGACTCGGGTTT 60.049 61.111 17.92 0.00 38.10 3.27
2698 4483 2.372690 CGCTGTCGACTCGGGTTTG 61.373 63.158 17.92 0.00 38.10 2.93
2699 4484 1.006571 GCTGTCGACTCGGGTTTGA 60.007 57.895 17.92 0.00 0.00 2.69
2700 4485 1.009389 GCTGTCGACTCGGGTTTGAG 61.009 60.000 17.92 3.21 41.86 3.02
2701 4486 1.006571 TGTCGACTCGGGTTTGAGC 60.007 57.895 17.92 0.00 39.68 4.26
2702 4487 2.087009 GTCGACTCGGGTTTGAGCG 61.087 63.158 8.70 0.00 39.68 5.03
2703 4488 2.049433 CGACTCGGGTTTGAGCGT 60.049 61.111 0.00 0.00 39.68 5.07
2704 4489 1.210931 CGACTCGGGTTTGAGCGTA 59.789 57.895 0.00 0.00 39.68 4.42
2705 4490 0.179145 CGACTCGGGTTTGAGCGTAT 60.179 55.000 0.00 0.00 39.68 3.06
2706 4491 1.064505 CGACTCGGGTTTGAGCGTATA 59.935 52.381 0.00 0.00 39.68 1.47
2707 4492 2.457970 GACTCGGGTTTGAGCGTATAC 58.542 52.381 0.00 0.00 39.68 1.47
2708 4493 2.097825 ACTCGGGTTTGAGCGTATACT 58.902 47.619 0.56 0.00 39.68 2.12
2709 4494 2.159282 ACTCGGGTTTGAGCGTATACTG 60.159 50.000 0.56 0.00 39.68 2.74
2858 4643 1.831652 GCAGCGGGGAGGCATATACT 61.832 60.000 0.00 0.00 34.64 2.12
2860 4645 0.977395 AGCGGGGAGGCATATACTTC 59.023 55.000 0.00 0.00 34.64 3.01
2861 4646 0.977395 GCGGGGAGGCATATACTTCT 59.023 55.000 0.00 0.00 0.00 2.85
2862 4647 1.066787 GCGGGGAGGCATATACTTCTC 60.067 57.143 0.00 0.00 0.00 2.87
2863 4648 1.550976 CGGGGAGGCATATACTTCTCC 59.449 57.143 0.00 0.00 43.65 3.71
2866 4651 1.550976 GGAGGCATATACTTCTCCCCG 59.449 57.143 0.00 0.00 39.75 5.73
2892 4677 0.457851 CCACCACGGTTGCAAAAAGA 59.542 50.000 0.00 0.00 0.00 2.52
2895 4680 2.096248 ACCACGGTTGCAAAAAGAAGA 58.904 42.857 0.00 0.00 0.00 2.87
2905 4690 1.329292 CAAAAAGAAGACGCGTCACCA 59.671 47.619 37.85 0.00 0.00 4.17
2906 4691 1.878953 AAAAGAAGACGCGTCACCAT 58.121 45.000 37.85 22.03 0.00 3.55
2907 4692 1.429463 AAAGAAGACGCGTCACCATC 58.571 50.000 37.85 27.65 0.00 3.51
2908 4693 0.603569 AAGAAGACGCGTCACCATCT 59.396 50.000 37.85 29.14 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.752222 TCCGTGAGAAGAAGTCAGTAGAC 59.248 47.826 0.00 0.00 45.31 2.59
1 2 3.752222 GTCCGTGAGAAGAAGTCAGTAGA 59.248 47.826 0.00 0.00 0.00 2.59
2 3 3.425094 CGTCCGTGAGAAGAAGTCAGTAG 60.425 52.174 0.00 0.00 0.00 2.57
3 4 2.483106 CGTCCGTGAGAAGAAGTCAGTA 59.517 50.000 0.00 0.00 0.00 2.74
4 5 1.267261 CGTCCGTGAGAAGAAGTCAGT 59.733 52.381 0.00 0.00 0.00 3.41
5 6 1.970447 CGTCCGTGAGAAGAAGTCAG 58.030 55.000 0.00 0.00 0.00 3.51
6 7 0.039437 GCGTCCGTGAGAAGAAGTCA 60.039 55.000 0.00 0.00 0.00 3.41
7 8 0.733223 GGCGTCCGTGAGAAGAAGTC 60.733 60.000 0.00 0.00 0.00 3.01
8 9 1.289380 GGCGTCCGTGAGAAGAAGT 59.711 57.895 0.00 0.00 0.00 3.01
9 10 1.446272 GGGCGTCCGTGAGAAGAAG 60.446 63.158 0.00 0.00 0.00 2.85
10 11 2.654877 GGGCGTCCGTGAGAAGAA 59.345 61.111 0.00 0.00 0.00 2.52
11 12 3.379445 GGGGCGTCCGTGAGAAGA 61.379 66.667 0.00 0.00 0.00 2.87
29 30 0.731994 GGAAGTAGTCGTCGGAGTCC 59.268 60.000 0.00 0.00 0.00 3.85
30 31 0.731994 GGGAAGTAGTCGTCGGAGTC 59.268 60.000 0.00 0.00 0.00 3.36
31 32 0.679321 GGGGAAGTAGTCGTCGGAGT 60.679 60.000 0.00 0.00 0.00 3.85
32 33 1.712977 CGGGGAAGTAGTCGTCGGAG 61.713 65.000 0.00 0.00 0.00 4.63
33 34 1.746615 CGGGGAAGTAGTCGTCGGA 60.747 63.158 0.00 0.00 0.00 4.55
34 35 1.746615 TCGGGGAAGTAGTCGTCGG 60.747 63.158 0.00 0.00 0.00 4.79
35 36 1.427020 GTCGGGGAAGTAGTCGTCG 59.573 63.158 0.00 0.00 0.00 5.12
36 37 1.021390 TCGTCGGGGAAGTAGTCGTC 61.021 60.000 0.00 0.00 0.00 4.20
37 38 1.003355 TCGTCGGGGAAGTAGTCGT 60.003 57.895 0.00 0.00 0.00 4.34
38 39 1.300971 TGTCGTCGGGGAAGTAGTCG 61.301 60.000 0.00 0.00 0.00 4.18
39 40 1.101331 ATGTCGTCGGGGAAGTAGTC 58.899 55.000 0.00 0.00 0.00 2.59
40 41 0.815734 CATGTCGTCGGGGAAGTAGT 59.184 55.000 0.00 0.00 0.00 2.73
41 42 0.102481 CCATGTCGTCGGGGAAGTAG 59.898 60.000 0.00 0.00 0.00 2.57
42 43 1.952102 GCCATGTCGTCGGGGAAGTA 61.952 60.000 0.00 0.00 0.00 2.24
43 44 2.978824 CCATGTCGTCGGGGAAGT 59.021 61.111 0.00 0.00 0.00 3.01
44 45 1.672854 TAGCCATGTCGTCGGGGAAG 61.673 60.000 0.00 0.00 0.00 3.46
45 46 1.683025 TAGCCATGTCGTCGGGGAA 60.683 57.895 0.00 0.00 0.00 3.97
46 47 2.043752 TAGCCATGTCGTCGGGGA 60.044 61.111 0.00 0.00 0.00 4.81
47 48 2.106332 GTAGCCATGTCGTCGGGG 59.894 66.667 0.00 0.00 0.00 5.73
48 49 2.106332 GGTAGCCATGTCGTCGGG 59.894 66.667 0.00 0.00 0.00 5.14
49 50 2.278596 CGGTAGCCATGTCGTCGG 60.279 66.667 0.00 0.00 0.00 4.79
50 51 1.298413 CTCGGTAGCCATGTCGTCG 60.298 63.158 0.00 0.00 0.00 5.12
51 52 1.065928 CCTCGGTAGCCATGTCGTC 59.934 63.158 0.00 0.00 0.00 4.20
52 53 1.379443 TCCTCGGTAGCCATGTCGT 60.379 57.895 0.00 0.00 0.00 4.34
53 54 1.065928 GTCCTCGGTAGCCATGTCG 59.934 63.158 0.00 0.00 0.00 4.35
54 55 0.179108 GTGTCCTCGGTAGCCATGTC 60.179 60.000 0.00 0.00 0.00 3.06
55 56 1.614241 GGTGTCCTCGGTAGCCATGT 61.614 60.000 0.00 0.00 0.00 3.21
56 57 1.144057 GGTGTCCTCGGTAGCCATG 59.856 63.158 0.00 0.00 0.00 3.66
57 58 2.423898 CGGTGTCCTCGGTAGCCAT 61.424 63.158 0.00 0.00 0.00 4.40
58 59 2.849096 ATCGGTGTCCTCGGTAGCCA 62.849 60.000 0.00 0.00 0.00 4.75
59 60 1.673808 AATCGGTGTCCTCGGTAGCC 61.674 60.000 0.00 0.00 0.00 3.93
60 61 0.248949 GAATCGGTGTCCTCGGTAGC 60.249 60.000 0.00 0.00 0.00 3.58
61 62 0.384669 GGAATCGGTGTCCTCGGTAG 59.615 60.000 0.00 0.00 31.94 3.18
62 63 0.323633 TGGAATCGGTGTCCTCGGTA 60.324 55.000 2.36 0.00 36.03 4.02
63 64 1.189524 TTGGAATCGGTGTCCTCGGT 61.190 55.000 2.36 0.00 36.03 4.69
64 65 0.460284 CTTGGAATCGGTGTCCTCGG 60.460 60.000 2.36 0.00 36.03 4.63
65 66 0.246635 ACTTGGAATCGGTGTCCTCG 59.753 55.000 2.36 0.00 36.03 4.63
66 67 1.405661 GGACTTGGAATCGGTGTCCTC 60.406 57.143 0.00 0.00 42.63 3.71
67 68 0.613777 GGACTTGGAATCGGTGTCCT 59.386 55.000 0.00 0.00 42.63 3.85
68 69 0.323629 TGGACTTGGAATCGGTGTCC 59.676 55.000 0.00 0.00 45.22 4.02
69 70 1.002087 ACTGGACTTGGAATCGGTGTC 59.998 52.381 0.00 0.00 0.00 3.67
70 71 1.056660 ACTGGACTTGGAATCGGTGT 58.943 50.000 0.00 0.00 0.00 4.16
71 72 1.442769 CACTGGACTTGGAATCGGTG 58.557 55.000 0.00 0.00 0.00 4.94
72 73 0.321653 GCACTGGACTTGGAATCGGT 60.322 55.000 0.00 0.00 0.00 4.69
73 74 0.036010 AGCACTGGACTTGGAATCGG 60.036 55.000 0.00 0.00 0.00 4.18
74 75 2.093973 AGTAGCACTGGACTTGGAATCG 60.094 50.000 0.00 0.00 0.00 3.34
75 76 3.265791 CAGTAGCACTGGACTTGGAATC 58.734 50.000 8.03 0.00 42.35 2.52
76 77 3.340814 CAGTAGCACTGGACTTGGAAT 57.659 47.619 8.03 0.00 42.35 3.01
77 78 2.839486 CAGTAGCACTGGACTTGGAA 57.161 50.000 8.03 0.00 42.35 3.53
87 88 0.107456 ACAGCAGCAACAGTAGCACT 59.893 50.000 0.00 0.00 0.00 4.40
88 89 0.947244 AACAGCAGCAACAGTAGCAC 59.053 50.000 0.00 0.00 0.00 4.40
89 90 0.946528 CAACAGCAGCAACAGTAGCA 59.053 50.000 0.00 0.00 0.00 3.49
90 91 0.947244 ACAACAGCAGCAACAGTAGC 59.053 50.000 0.00 0.00 0.00 3.58
91 92 1.532868 GGACAACAGCAGCAACAGTAG 59.467 52.381 0.00 0.00 0.00 2.57
92 93 1.593196 GGACAACAGCAGCAACAGTA 58.407 50.000 0.00 0.00 0.00 2.74
93 94 1.103398 GGGACAACAGCAGCAACAGT 61.103 55.000 0.00 0.00 0.00 3.55
94 95 1.102809 TGGGACAACAGCAGCAACAG 61.103 55.000 0.00 0.00 31.92 3.16
95 96 1.077140 TGGGACAACAGCAGCAACA 60.077 52.632 0.00 0.00 31.92 3.33
96 97 3.840437 TGGGACAACAGCAGCAAC 58.160 55.556 0.00 0.00 31.92 4.17
108 109 4.823790 AAAACAAGAACACGTATGGGAC 57.176 40.909 0.00 0.00 0.00 4.46
127 128 6.411376 TGTGACAGAACCTCTAACAGAAAAA 58.589 36.000 0.00 0.00 0.00 1.94
128 129 5.984725 TGTGACAGAACCTCTAACAGAAAA 58.015 37.500 0.00 0.00 0.00 2.29
129 130 5.128827 ACTGTGACAGAACCTCTAACAGAAA 59.871 40.000 20.97 0.00 36.21 2.52
130 131 4.649674 ACTGTGACAGAACCTCTAACAGAA 59.350 41.667 20.97 0.00 36.21 3.02
131 132 4.215908 ACTGTGACAGAACCTCTAACAGA 58.784 43.478 20.97 1.84 36.21 3.41
132 133 4.592485 ACTGTGACAGAACCTCTAACAG 57.408 45.455 20.97 0.00 37.50 3.16
133 134 4.202223 GGAACTGTGACAGAACCTCTAACA 60.202 45.833 20.97 0.00 35.18 2.41
134 135 4.039366 AGGAACTGTGACAGAACCTCTAAC 59.961 45.833 20.97 0.00 36.53 2.34
135 136 4.223953 AGGAACTGTGACAGAACCTCTAA 58.776 43.478 20.97 0.00 36.53 2.10
136 137 3.845860 AGGAACTGTGACAGAACCTCTA 58.154 45.455 20.97 0.00 36.53 2.43
137 138 2.683768 AGGAACTGTGACAGAACCTCT 58.316 47.619 20.97 6.27 36.53 3.69
138 139 3.134458 CAAGGAACTGTGACAGAACCTC 58.866 50.000 25.19 14.34 40.86 3.85
139 140 2.505819 ACAAGGAACTGTGACAGAACCT 59.494 45.455 20.97 21.46 40.86 3.50
140 141 2.919228 ACAAGGAACTGTGACAGAACC 58.081 47.619 20.97 19.70 40.86 3.62
141 142 4.192317 AGAACAAGGAACTGTGACAGAAC 58.808 43.478 20.97 11.87 40.86 3.01
142 143 4.487714 AGAACAAGGAACTGTGACAGAA 57.512 40.909 20.97 0.00 40.86 3.02
143 144 4.649674 ACTAGAACAAGGAACTGTGACAGA 59.350 41.667 20.97 0.00 40.86 3.41
144 145 4.950050 ACTAGAACAAGGAACTGTGACAG 58.050 43.478 11.70 11.70 40.86 3.51
145 146 4.649674 AGACTAGAACAAGGAACTGTGACA 59.350 41.667 0.00 0.00 40.86 3.58
146 147 5.203060 AGACTAGAACAAGGAACTGTGAC 57.797 43.478 0.00 0.00 40.86 3.67
147 148 5.871396 AAGACTAGAACAAGGAACTGTGA 57.129 39.130 0.00 0.00 40.86 3.58
148 149 5.277538 GCAAAGACTAGAACAAGGAACTGTG 60.278 44.000 0.00 0.00 40.86 3.66
149 150 4.816925 GCAAAGACTAGAACAAGGAACTGT 59.183 41.667 0.00 0.00 40.86 3.55
150 151 4.214332 GGCAAAGACTAGAACAAGGAACTG 59.786 45.833 0.00 0.00 40.86 3.16
151 152 9.366213 CTAGGGCAAAGACTAGAACAAGGAACT 62.366 44.444 0.00 0.00 39.03 3.01
152 153 3.502595 GGGCAAAGACTAGAACAAGGAAC 59.497 47.826 0.00 0.00 0.00 3.62
153 154 3.394606 AGGGCAAAGACTAGAACAAGGAA 59.605 43.478 0.00 0.00 0.00 3.36
154 155 2.979678 AGGGCAAAGACTAGAACAAGGA 59.020 45.455 0.00 0.00 0.00 3.36
155 156 3.425162 AGGGCAAAGACTAGAACAAGG 57.575 47.619 0.00 0.00 0.00 3.61
156 157 5.172205 GTCTAGGGCAAAGACTAGAACAAG 58.828 45.833 10.29 0.00 45.09 3.16
157 158 4.591498 TGTCTAGGGCAAAGACTAGAACAA 59.409 41.667 16.41 0.00 45.09 2.83
158 159 4.157246 TGTCTAGGGCAAAGACTAGAACA 58.843 43.478 16.41 7.53 45.09 3.18
159 160 4.803098 TGTCTAGGGCAAAGACTAGAAC 57.197 45.455 16.41 5.65 45.09 3.01
160 161 5.023452 TCATGTCTAGGGCAAAGACTAGAA 58.977 41.667 16.41 0.89 45.09 2.10
161 162 4.402793 GTCATGTCTAGGGCAAAGACTAGA 59.597 45.833 16.41 12.05 43.13 2.43
162 163 4.160439 TGTCATGTCTAGGGCAAAGACTAG 59.840 45.833 16.41 10.44 43.13 2.57
163 164 4.093743 TGTCATGTCTAGGGCAAAGACTA 58.906 43.478 16.41 6.57 43.13 2.59
164 165 2.906389 TGTCATGTCTAGGGCAAAGACT 59.094 45.455 16.41 3.46 43.13 3.24
165 166 3.265791 CTGTCATGTCTAGGGCAAAGAC 58.734 50.000 10.56 10.56 43.04 3.01
166 167 2.237143 CCTGTCATGTCTAGGGCAAAGA 59.763 50.000 0.00 0.00 0.00 2.52
167 168 2.026822 ACCTGTCATGTCTAGGGCAAAG 60.027 50.000 14.17 0.00 35.89 2.77
168 169 1.985159 ACCTGTCATGTCTAGGGCAAA 59.015 47.619 14.17 0.00 35.89 3.68
169 170 1.656587 ACCTGTCATGTCTAGGGCAA 58.343 50.000 14.17 0.00 35.89 4.52
170 171 1.555075 GAACCTGTCATGTCTAGGGCA 59.445 52.381 14.17 0.00 35.89 5.36
171 172 1.834263 AGAACCTGTCATGTCTAGGGC 59.166 52.381 14.17 7.94 35.89 5.19
172 173 4.282496 AGTAGAACCTGTCATGTCTAGGG 58.718 47.826 14.17 6.62 35.89 3.53
173 174 5.419155 TGAAGTAGAACCTGTCATGTCTAGG 59.581 44.000 9.92 9.92 37.61 3.02
174 175 6.516739 TGAAGTAGAACCTGTCATGTCTAG 57.483 41.667 0.00 0.00 0.00 2.43
175 176 8.768501 ATATGAAGTAGAACCTGTCATGTCTA 57.231 34.615 0.00 0.00 31.58 2.59
176 177 7.667575 ATATGAAGTAGAACCTGTCATGTCT 57.332 36.000 0.00 0.00 31.58 3.41
177 178 9.416794 CATATATGAAGTAGAACCTGTCATGTC 57.583 37.037 6.92 0.00 31.58 3.06
178 179 7.875041 GCATATATGAAGTAGAACCTGTCATGT 59.125 37.037 17.10 0.00 31.58 3.21
179 180 7.874528 TGCATATATGAAGTAGAACCTGTCATG 59.125 37.037 17.10 0.00 31.58 3.07
180 181 7.966812 TGCATATATGAAGTAGAACCTGTCAT 58.033 34.615 17.10 0.00 33.63 3.06
181 182 7.360113 TGCATATATGAAGTAGAACCTGTCA 57.640 36.000 17.10 0.00 0.00 3.58
182 183 7.928706 AGTTGCATATATGAAGTAGAACCTGTC 59.071 37.037 17.10 0.00 0.00 3.51
183 184 7.796054 AGTTGCATATATGAAGTAGAACCTGT 58.204 34.615 17.10 0.00 0.00 4.00
184 185 8.554528 CAAGTTGCATATATGAAGTAGAACCTG 58.445 37.037 17.10 0.00 0.00 4.00
185 186 7.716998 CCAAGTTGCATATATGAAGTAGAACCT 59.283 37.037 17.10 0.00 0.00 3.50
186 187 7.499232 ACCAAGTTGCATATATGAAGTAGAACC 59.501 37.037 17.10 0.00 0.00 3.62
187 188 8.438676 ACCAAGTTGCATATATGAAGTAGAAC 57.561 34.615 17.10 0.69 0.00 3.01
188 189 8.486210 AGACCAAGTTGCATATATGAAGTAGAA 58.514 33.333 17.10 0.00 0.00 2.10
189 190 8.023021 AGACCAAGTTGCATATATGAAGTAGA 57.977 34.615 17.10 0.00 0.00 2.59
190 191 9.197694 GTAGACCAAGTTGCATATATGAAGTAG 57.802 37.037 17.10 8.32 0.00 2.57
191 192 8.924303 AGTAGACCAAGTTGCATATATGAAGTA 58.076 33.333 17.10 0.00 0.00 2.24
192 193 7.712639 CAGTAGACCAAGTTGCATATATGAAGT 59.287 37.037 17.10 7.89 0.00 3.01
193 194 7.712639 ACAGTAGACCAAGTTGCATATATGAAG 59.287 37.037 17.10 0.00 0.00 3.02
194 195 7.564793 ACAGTAGACCAAGTTGCATATATGAA 58.435 34.615 17.10 2.49 0.00 2.57
195 196 7.069950 AGACAGTAGACCAAGTTGCATATATGA 59.930 37.037 17.10 0.00 0.00 2.15
196 197 7.170489 CAGACAGTAGACCAAGTTGCATATATG 59.830 40.741 8.45 8.45 0.00 1.78
197 198 7.212976 CAGACAGTAGACCAAGTTGCATATAT 58.787 38.462 0.00 0.00 0.00 0.86
198 199 6.573434 CAGACAGTAGACCAAGTTGCATATA 58.427 40.000 0.00 0.00 0.00 0.86
199 200 5.423015 CAGACAGTAGACCAAGTTGCATAT 58.577 41.667 0.00 0.00 0.00 1.78
200 201 4.820897 CAGACAGTAGACCAAGTTGCATA 58.179 43.478 0.00 0.00 0.00 3.14
201 202 3.668447 CAGACAGTAGACCAAGTTGCAT 58.332 45.455 0.00 0.00 0.00 3.96
202 203 2.806745 GCAGACAGTAGACCAAGTTGCA 60.807 50.000 0.00 0.00 0.00 4.08
203 204 1.801178 GCAGACAGTAGACCAAGTTGC 59.199 52.381 0.00 0.00 0.00 4.17
204 205 3.006323 AGAGCAGACAGTAGACCAAGTTG 59.994 47.826 0.00 0.00 0.00 3.16
205 206 3.235200 AGAGCAGACAGTAGACCAAGTT 58.765 45.455 0.00 0.00 0.00 2.66
206 207 2.883026 AGAGCAGACAGTAGACCAAGT 58.117 47.619 0.00 0.00 0.00 3.16
207 208 4.265893 TCTAGAGCAGACAGTAGACCAAG 58.734 47.826 0.00 0.00 0.00 3.61
208 209 4.019231 TCTCTAGAGCAGACAGTAGACCAA 60.019 45.833 15.35 0.00 0.00 3.67
209 210 3.519913 TCTCTAGAGCAGACAGTAGACCA 59.480 47.826 15.35 0.00 0.00 4.02
210 211 4.145365 TCTCTAGAGCAGACAGTAGACC 57.855 50.000 15.35 0.00 0.00 3.85
211 212 5.123227 ACATCTCTAGAGCAGACAGTAGAC 58.877 45.833 15.35 0.00 0.00 2.59
212 213 5.366482 ACATCTCTAGAGCAGACAGTAGA 57.634 43.478 15.35 0.00 0.00 2.59
213 214 6.094742 TCAAACATCTCTAGAGCAGACAGTAG 59.905 42.308 15.35 0.03 0.00 2.57
214 215 5.946377 TCAAACATCTCTAGAGCAGACAGTA 59.054 40.000 15.35 0.00 0.00 2.74
215 216 4.769488 TCAAACATCTCTAGAGCAGACAGT 59.231 41.667 15.35 4.16 0.00 3.55
216 217 5.321959 TCAAACATCTCTAGAGCAGACAG 57.678 43.478 15.35 4.07 0.00 3.51
217 218 5.929058 ATCAAACATCTCTAGAGCAGACA 57.071 39.130 15.35 0.00 0.00 3.41
218 219 6.572519 AGAATCAAACATCTCTAGAGCAGAC 58.427 40.000 15.35 0.00 0.00 3.51
219 220 6.788598 AGAATCAAACATCTCTAGAGCAGA 57.211 37.500 15.35 6.50 0.00 4.26
220 221 7.715657 ACTAGAATCAAACATCTCTAGAGCAG 58.284 38.462 15.35 11.71 39.77 4.24
221 222 7.652524 ACTAGAATCAAACATCTCTAGAGCA 57.347 36.000 15.35 4.70 39.77 4.26
222 223 8.940768 AAACTAGAATCAAACATCTCTAGAGC 57.059 34.615 15.35 0.00 39.77 4.09
252 253 9.653287 CAGAGTGAAGGTAAATAACATCTGTAA 57.347 33.333 0.00 0.00 0.00 2.41
253 254 8.812972 ACAGAGTGAAGGTAAATAACATCTGTA 58.187 33.333 0.00 0.00 41.20 2.74
254 255 7.680730 ACAGAGTGAAGGTAAATAACATCTGT 58.319 34.615 0.00 0.00 38.95 3.41
255 256 7.819415 TGACAGAGTGAAGGTAAATAACATCTG 59.181 37.037 0.00 0.00 37.16 2.90
256 257 7.907389 TGACAGAGTGAAGGTAAATAACATCT 58.093 34.615 0.00 0.00 0.00 2.90
257 258 8.035394 TCTGACAGAGTGAAGGTAAATAACATC 58.965 37.037 0.00 0.00 0.00 3.06
258 259 7.907389 TCTGACAGAGTGAAGGTAAATAACAT 58.093 34.615 0.00 0.00 0.00 2.71
259 260 7.297936 TCTGACAGAGTGAAGGTAAATAACA 57.702 36.000 0.00 0.00 0.00 2.41
260 261 7.221067 CGATCTGACAGAGTGAAGGTAAATAAC 59.779 40.741 11.52 0.00 0.00 1.89
261 262 7.258441 CGATCTGACAGAGTGAAGGTAAATAA 58.742 38.462 11.52 0.00 0.00 1.40
262 263 6.680625 GCGATCTGACAGAGTGAAGGTAAATA 60.681 42.308 11.52 0.00 0.00 1.40
263 264 5.655488 CGATCTGACAGAGTGAAGGTAAAT 58.345 41.667 11.52 0.00 0.00 1.40
264 265 4.618460 GCGATCTGACAGAGTGAAGGTAAA 60.618 45.833 11.52 0.00 0.00 2.01
265 266 3.119459 GCGATCTGACAGAGTGAAGGTAA 60.119 47.826 11.52 0.00 0.00 2.85
266 267 2.423892 GCGATCTGACAGAGTGAAGGTA 59.576 50.000 11.52 0.00 0.00 3.08
267 268 1.203523 GCGATCTGACAGAGTGAAGGT 59.796 52.381 11.52 0.00 0.00 3.50
268 269 1.203287 TGCGATCTGACAGAGTGAAGG 59.797 52.381 11.52 0.00 0.00 3.46
269 270 2.643933 TGCGATCTGACAGAGTGAAG 57.356 50.000 11.52 1.78 0.00 3.02
270 271 2.493278 TCATGCGATCTGACAGAGTGAA 59.507 45.455 11.52 0.53 0.00 3.18
271 272 2.094675 TCATGCGATCTGACAGAGTGA 58.905 47.619 11.52 7.13 0.00 3.41
272 273 2.159268 AGTCATGCGATCTGACAGAGTG 60.159 50.000 11.52 6.82 44.37 3.51
273 274 2.098614 AGTCATGCGATCTGACAGAGT 58.901 47.619 11.52 0.00 44.37 3.24
274 275 2.858941 CAAGTCATGCGATCTGACAGAG 59.141 50.000 11.52 0.00 44.37 3.35
275 276 2.232208 ACAAGTCATGCGATCTGACAGA 59.768 45.455 7.80 7.80 44.37 3.41
276 277 2.614779 ACAAGTCATGCGATCTGACAG 58.385 47.619 14.08 9.33 44.37 3.51
277 278 2.749280 ACAAGTCATGCGATCTGACA 57.251 45.000 14.08 0.15 44.37 3.58
278 279 3.257393 AGAACAAGTCATGCGATCTGAC 58.743 45.455 5.63 5.63 42.68 3.51
279 280 3.599730 AGAACAAGTCATGCGATCTGA 57.400 42.857 0.00 0.00 0.00 3.27
280 281 5.288015 AGATAGAACAAGTCATGCGATCTG 58.712 41.667 0.00 0.00 0.00 2.90
281 282 5.301551 AGAGATAGAACAAGTCATGCGATCT 59.698 40.000 0.00 0.00 0.00 2.75
282 283 5.401972 CAGAGATAGAACAAGTCATGCGATC 59.598 44.000 0.00 0.00 0.00 3.69
283 284 5.288015 CAGAGATAGAACAAGTCATGCGAT 58.712 41.667 0.00 0.00 0.00 4.58
284 285 4.676546 CAGAGATAGAACAAGTCATGCGA 58.323 43.478 0.00 0.00 0.00 5.10
285 286 3.244814 GCAGAGATAGAACAAGTCATGCG 59.755 47.826 0.00 0.00 0.00 4.73
286 287 4.440880 AGCAGAGATAGAACAAGTCATGC 58.559 43.478 0.00 0.00 0.00 4.06
287 288 8.659925 AAATAGCAGAGATAGAACAAGTCATG 57.340 34.615 0.00 0.00 0.00 3.07
289 290 9.809096 CTAAAATAGCAGAGATAGAACAAGTCA 57.191 33.333 0.00 0.00 0.00 3.41
290 291 9.810545 ACTAAAATAGCAGAGATAGAACAAGTC 57.189 33.333 0.00 0.00 0.00 3.01
291 292 9.810545 GACTAAAATAGCAGAGATAGAACAAGT 57.189 33.333 0.00 0.00 0.00 3.16
292 293 9.809096 TGACTAAAATAGCAGAGATAGAACAAG 57.191 33.333 0.00 0.00 0.00 3.16
294 295 9.755804 CATGACTAAAATAGCAGAGATAGAACA 57.244 33.333 0.00 0.00 0.00 3.18
295 296 8.707839 GCATGACTAAAATAGCAGAGATAGAAC 58.292 37.037 0.00 0.00 0.00 3.01
296 297 8.646004 AGCATGACTAAAATAGCAGAGATAGAA 58.354 33.333 0.00 0.00 0.00 2.10
297 298 8.187913 AGCATGACTAAAATAGCAGAGATAGA 57.812 34.615 0.00 0.00 0.00 1.98
298 299 8.830201 AAGCATGACTAAAATAGCAGAGATAG 57.170 34.615 0.00 0.00 0.00 2.08
300 301 9.790344 ATAAAGCATGACTAAAATAGCAGAGAT 57.210 29.630 0.00 0.00 0.00 2.75
301 302 9.618890 AATAAAGCATGACTAAAATAGCAGAGA 57.381 29.630 0.00 0.00 0.00 3.10
353 354 9.970395 GATGTTGGAAATATGAGCAATTTATCA 57.030 29.630 0.00 0.00 0.00 2.15
354 355 9.415544 GGATGTTGGAAATATGAGCAATTTATC 57.584 33.333 0.00 0.00 0.00 1.75
355 356 8.926374 TGGATGTTGGAAATATGAGCAATTTAT 58.074 29.630 0.00 0.00 0.00 1.40
356 357 8.303780 TGGATGTTGGAAATATGAGCAATTTA 57.696 30.769 0.00 0.00 0.00 1.40
357 358 7.185318 TGGATGTTGGAAATATGAGCAATTT 57.815 32.000 0.00 0.00 0.00 1.82
358 359 6.795144 TGGATGTTGGAAATATGAGCAATT 57.205 33.333 0.00 0.00 0.00 2.32
359 360 6.551975 TCATGGATGTTGGAAATATGAGCAAT 59.448 34.615 0.00 0.00 0.00 3.56
360 361 5.892686 TCATGGATGTTGGAAATATGAGCAA 59.107 36.000 0.00 0.00 0.00 3.91
361 362 5.300034 GTCATGGATGTTGGAAATATGAGCA 59.700 40.000 0.00 0.00 0.00 4.26
362 363 5.300034 TGTCATGGATGTTGGAAATATGAGC 59.700 40.000 0.00 0.00 0.00 4.26
363 364 6.544931 ACTGTCATGGATGTTGGAAATATGAG 59.455 38.462 0.00 0.00 0.00 2.90
364 365 6.319405 CACTGTCATGGATGTTGGAAATATGA 59.681 38.462 0.00 0.00 0.00 2.15
365 366 6.319405 TCACTGTCATGGATGTTGGAAATATG 59.681 38.462 0.00 0.00 0.00 1.78
366 367 6.319658 GTCACTGTCATGGATGTTGGAAATAT 59.680 38.462 0.00 0.00 0.00 1.28
367 368 5.647658 GTCACTGTCATGGATGTTGGAAATA 59.352 40.000 0.00 0.00 0.00 1.40
368 369 4.460382 GTCACTGTCATGGATGTTGGAAAT 59.540 41.667 0.00 0.00 0.00 2.17
369 370 3.820467 GTCACTGTCATGGATGTTGGAAA 59.180 43.478 0.00 0.00 0.00 3.13
370 371 3.181446 TGTCACTGTCATGGATGTTGGAA 60.181 43.478 0.00 0.00 0.00 3.53
371 372 2.371510 TGTCACTGTCATGGATGTTGGA 59.628 45.455 0.00 0.00 0.00 3.53
372 373 2.745821 CTGTCACTGTCATGGATGTTGG 59.254 50.000 0.00 0.00 0.00 3.77
373 374 3.187842 CACTGTCACTGTCATGGATGTTG 59.812 47.826 0.00 0.00 0.00 3.33
374 375 3.071457 TCACTGTCACTGTCATGGATGTT 59.929 43.478 0.00 0.00 0.00 2.71
375 376 2.634453 TCACTGTCACTGTCATGGATGT 59.366 45.455 0.00 0.00 0.00 3.06
376 377 2.998670 GTCACTGTCACTGTCATGGATG 59.001 50.000 0.00 0.00 0.00 3.51
377 378 2.027745 GGTCACTGTCACTGTCATGGAT 60.028 50.000 0.00 0.00 0.00 3.41
387 388 4.675114 CGCTTTTTATTTGGTCACTGTCAC 59.325 41.667 0.00 0.00 0.00 3.67
502 503 2.878429 CACGAGACAGGACGGGAG 59.122 66.667 0.00 0.00 34.69 4.30
503 504 3.371063 GCACGAGACAGGACGGGA 61.371 66.667 0.00 0.00 34.69 5.14
504 505 4.436998 GGCACGAGACAGGACGGG 62.437 72.222 0.00 0.00 35.93 5.28
505 506 4.436998 GGGCACGAGACAGGACGG 62.437 72.222 0.00 0.00 0.00 4.79
506 507 3.374402 AGGGCACGAGACAGGACG 61.374 66.667 0.00 0.00 0.00 4.79
507 508 2.262915 CAGGGCACGAGACAGGAC 59.737 66.667 0.00 0.00 0.00 3.85
545 546 1.823169 TTGTGGGACTGGACGTAGCC 61.823 60.000 0.00 0.00 0.00 3.93
546 547 0.249398 ATTGTGGGACTGGACGTAGC 59.751 55.000 0.00 0.00 0.00 3.58
548 549 3.181484 CGATTATTGTGGGACTGGACGTA 60.181 47.826 0.00 0.00 0.00 3.57
549 550 2.418197 CGATTATTGTGGGACTGGACGT 60.418 50.000 0.00 0.00 0.00 4.34
551 552 3.536956 TCGATTATTGTGGGACTGGAC 57.463 47.619 0.00 0.00 0.00 4.02
594 610 2.295253 AAACGCTCTAATCCGTCCAG 57.705 50.000 0.00 0.00 36.56 3.86
595 611 2.028839 TCAAAACGCTCTAATCCGTCCA 60.029 45.455 0.00 0.00 36.56 4.02
596 612 2.347755 GTCAAAACGCTCTAATCCGTCC 59.652 50.000 0.00 0.00 36.56 4.79
597 613 2.347755 GGTCAAAACGCTCTAATCCGTC 59.652 50.000 0.00 0.00 36.56 4.79
598 614 2.289195 TGGTCAAAACGCTCTAATCCGT 60.289 45.455 0.00 0.00 39.70 4.69
599 615 2.343101 TGGTCAAAACGCTCTAATCCG 58.657 47.619 0.00 0.00 0.00 4.18
680 696 0.173481 CTGTGACGGTGTGATCGGAT 59.827 55.000 0.00 0.00 0.00 4.18
681 697 1.176619 ACTGTGACGGTGTGATCGGA 61.177 55.000 0.00 0.00 0.00 4.55
682 698 0.319555 AACTGTGACGGTGTGATCGG 60.320 55.000 0.00 0.00 0.00 4.18
683 699 1.497991 AAACTGTGACGGTGTGATCG 58.502 50.000 0.00 0.00 0.00 3.69
684 700 3.064820 ACAAAAACTGTGACGGTGTGATC 59.935 43.478 0.00 0.00 36.69 2.92
685 701 3.013921 ACAAAAACTGTGACGGTGTGAT 58.986 40.909 0.00 0.00 36.69 3.06
686 702 2.428491 ACAAAAACTGTGACGGTGTGA 58.572 42.857 0.00 0.00 36.69 3.58
687 703 2.911819 ACAAAAACTGTGACGGTGTG 57.088 45.000 0.00 0.00 36.69 3.82
697 713 7.548780 TCCTTTCTTTTGATCCAACAAAAACTG 59.451 33.333 0.00 0.00 45.04 3.16
698 714 7.619965 TCCTTTCTTTTGATCCAACAAAAACT 58.380 30.769 0.00 0.00 45.04 2.66
699 715 7.465916 GCTCCTTTCTTTTGATCCAACAAAAAC 60.466 37.037 0.00 0.00 45.04 2.43
700 716 6.538381 GCTCCTTTCTTTTGATCCAACAAAAA 59.462 34.615 0.00 0.00 45.04 1.94
706 722 4.279169 CAGTGCTCCTTTCTTTTGATCCAA 59.721 41.667 0.00 0.00 0.00 3.53
715 731 3.118956 CGTAGGATCAGTGCTCCTTTCTT 60.119 47.826 20.22 0.00 40.29 2.52
717 733 2.427453 TCGTAGGATCAGTGCTCCTTTC 59.573 50.000 20.22 12.73 40.29 2.62
719 735 2.145397 TCGTAGGATCAGTGCTCCTT 57.855 50.000 20.22 5.66 40.29 3.36
720 736 2.145397 TTCGTAGGATCAGTGCTCCT 57.855 50.000 19.09 19.09 45.22 3.69
721 737 2.101582 ACATTCGTAGGATCAGTGCTCC 59.898 50.000 4.76 4.76 0.00 4.70
722 738 3.119291 CACATTCGTAGGATCAGTGCTC 58.881 50.000 0.00 0.00 0.00 4.26
723 739 2.760650 TCACATTCGTAGGATCAGTGCT 59.239 45.455 0.00 0.00 0.00 4.40
724 740 3.165058 TCACATTCGTAGGATCAGTGC 57.835 47.619 0.00 0.00 0.00 4.40
725 741 3.492383 GCATCACATTCGTAGGATCAGTG 59.508 47.826 0.00 6.24 0.00 3.66
726 742 3.493350 GGCATCACATTCGTAGGATCAGT 60.493 47.826 0.00 0.00 0.00 3.41
727 743 3.062763 GGCATCACATTCGTAGGATCAG 58.937 50.000 0.00 0.00 0.00 2.90
728 744 2.700371 AGGCATCACATTCGTAGGATCA 59.300 45.455 0.00 0.00 0.00 2.92
733 749 1.331756 GGCAAGGCATCACATTCGTAG 59.668 52.381 0.00 0.00 0.00 3.51
735 751 0.608856 TGGCAAGGCATCACATTCGT 60.609 50.000 0.00 0.00 0.00 3.85
739 755 0.892755 CTGTTGGCAAGGCATCACAT 59.107 50.000 0.00 0.00 0.00 3.21
921 969 7.924541 TGTTGGTTACTGGTAGGAGATAAAAT 58.075 34.615 0.00 0.00 0.00 1.82
1035 1083 2.137810 AGGAAACTCTCTCCCTCTCG 57.862 55.000 0.00 0.00 32.90 4.04
1123 1177 1.079750 GTCCCTGGCTCGTGAGTTC 60.080 63.158 0.00 0.00 0.00 3.01
1127 1181 1.118965 TTCTTGTCCCTGGCTCGTGA 61.119 55.000 0.00 0.00 0.00 4.35
1465 1531 2.484203 GAGAAGGACGACGACCCG 59.516 66.667 12.78 0.00 0.00 5.28
1588 1654 0.606944 CCTATCTCCTCCGGTCCTCG 60.607 65.000 0.00 0.00 38.88 4.63
1594 1660 0.961358 CCGCTACCTATCTCCTCCGG 60.961 65.000 0.00 0.00 0.00 5.14
1613 1679 5.761165 TCAGCCTAACAAACTAACAAACC 57.239 39.130 0.00 0.00 0.00 3.27
1622 1688 7.329471 GGAGAAAAATCAATCAGCCTAACAAAC 59.671 37.037 0.00 0.00 0.00 2.93
1623 1689 7.015098 TGGAGAAAAATCAATCAGCCTAACAAA 59.985 33.333 0.00 0.00 0.00 2.83
1624 1690 6.493115 TGGAGAAAAATCAATCAGCCTAACAA 59.507 34.615 0.00 0.00 0.00 2.83
1625 1691 6.009589 TGGAGAAAAATCAATCAGCCTAACA 58.990 36.000 0.00 0.00 0.00 2.41
1740 1831 1.069378 CACTAACCGACGGCGAGAAC 61.069 60.000 15.16 0.69 40.82 3.01
1800 1891 1.364901 CTGGGCAGCAACCTTGTTG 59.635 57.895 2.65 2.65 41.57 3.33
1802 1893 1.829533 CACTGGGCAGCAACCTTGT 60.830 57.895 0.00 0.00 0.00 3.16
1918 2054 3.700038 AGGTAAGAGTACAGTAATGCGCT 59.300 43.478 9.73 0.00 31.21 5.92
1919 2055 4.043037 AGGTAAGAGTACAGTAATGCGC 57.957 45.455 0.00 0.00 31.21 6.09
1920 2056 5.502153 AGAGGTAAGAGTACAGTAATGCG 57.498 43.478 0.00 0.00 31.21 4.73
1921 2057 5.221283 GGGAGAGGTAAGAGTACAGTAATGC 60.221 48.000 0.00 0.00 31.21 3.56
1976 2112 2.854967 AGACAAATCCTGTGATCCCCAT 59.145 45.455 0.00 0.00 38.84 4.00
1977 2113 2.239654 GAGACAAATCCTGTGATCCCCA 59.760 50.000 0.00 0.00 38.84 4.96
1978 2114 2.239654 TGAGACAAATCCTGTGATCCCC 59.760 50.000 0.00 0.00 38.84 4.81
1981 2119 4.774124 TCCATGAGACAAATCCTGTGATC 58.226 43.478 0.00 0.00 38.84 2.92
1994 2132 2.479566 TCACCAGCTTTCCATGAGAC 57.520 50.000 0.00 0.00 0.00 3.36
2054 2192 3.573967 ACTGCAACGGATCATTTTTCCTT 59.426 39.130 0.00 0.00 0.00 3.36
2100 2238 5.813080 AGACGTTGTTTAATAATGGCTCC 57.187 39.130 0.00 0.00 25.78 4.70
2166 2304 4.945543 CCCCCTGGTTGTTTAATACAGTAC 59.054 45.833 0.00 0.00 38.19 2.73
2167 2305 4.602732 ACCCCCTGGTTGTTTAATACAGTA 59.397 41.667 0.00 0.00 44.75 2.74
2168 2306 3.399983 ACCCCCTGGTTGTTTAATACAGT 59.600 43.478 0.00 0.00 44.75 3.55
2169 2307 3.761752 CACCCCCTGGTTGTTTAATACAG 59.238 47.826 0.00 0.00 44.75 2.74
2170 2308 3.140519 ACACCCCCTGGTTGTTTAATACA 59.859 43.478 0.00 0.00 44.75 2.29
2324 2463 7.038587 TCCAAAGTGTTTTCTAGCTAGGTGATA 60.039 37.037 20.58 0.00 0.00 2.15
2333 4097 4.479619 CATGCTCCAAAGTGTTTTCTAGC 58.520 43.478 0.00 0.00 34.19 3.42
2342 4106 1.940883 ATGCGCCATGCTCCAAAGTG 61.941 55.000 4.18 0.00 46.63 3.16
2371 4135 2.202557 TGCCTGCGTATCACGACG 60.203 61.111 2.35 0.00 46.05 5.12
2375 4139 2.505498 CGTCGTGCCTGCGTATCAC 61.505 63.158 0.00 0.00 0.00 3.06
2384 4148 2.573869 CCATGTCTCGTCGTGCCT 59.426 61.111 0.00 0.00 0.00 4.75
2394 4158 1.450848 CATGACGCTGGCCATGTCT 60.451 57.895 28.46 16.84 36.36 3.41
2453 4232 4.034163 GTCCCGCTCAAGTAAATAAAGAGC 59.966 45.833 0.00 0.00 46.07 4.09
2519 4298 4.489771 CCCCGCATGACCTGGACC 62.490 72.222 0.00 0.00 0.00 4.46
2545 4324 1.081774 GCCTCGGATCATCGACTCG 60.082 63.158 0.00 0.00 35.18 4.18
2588 4368 4.021631 ACTCGTTCGCGCGTCTGA 62.022 61.111 30.98 22.54 41.05 3.27
2645 4430 3.119531 TGTCCGCCTTCAGCAATTATTTG 60.120 43.478 0.00 0.00 44.04 2.32
2646 4431 3.088532 TGTCCGCCTTCAGCAATTATTT 58.911 40.909 0.00 0.00 44.04 1.40
2647 4432 2.423538 GTGTCCGCCTTCAGCAATTATT 59.576 45.455 0.00 0.00 44.04 1.40
2648 4433 2.017049 GTGTCCGCCTTCAGCAATTAT 58.983 47.619 0.00 0.00 44.04 1.28
2649 4434 1.448985 GTGTCCGCCTTCAGCAATTA 58.551 50.000 0.00 0.00 44.04 1.40
2650 4435 1.577328 CGTGTCCGCCTTCAGCAATT 61.577 55.000 0.00 0.00 44.04 2.32
2651 4436 2.034879 CGTGTCCGCCTTCAGCAAT 61.035 57.895 0.00 0.00 44.04 3.56
2652 4437 2.664851 CGTGTCCGCCTTCAGCAA 60.665 61.111 0.00 0.00 44.04 3.91
2695 4480 1.635844 CGGCACAGTATACGCTCAAA 58.364 50.000 0.00 0.00 0.00 2.69
2697 4482 1.435925 CCGGCACAGTATACGCTCA 59.564 57.895 0.00 0.00 0.00 4.26
2698 4483 1.299926 CCCGGCACAGTATACGCTC 60.300 63.158 0.00 0.00 0.00 5.03
2699 4484 2.056223 ACCCGGCACAGTATACGCT 61.056 57.895 0.00 0.00 0.00 5.07
2700 4485 1.881252 CACCCGGCACAGTATACGC 60.881 63.158 0.00 0.00 0.00 4.42
2701 4486 1.227147 CCACCCGGCACAGTATACG 60.227 63.158 0.00 0.00 0.00 3.06
2702 4487 4.848685 CCACCCGGCACAGTATAC 57.151 61.111 0.00 0.00 0.00 1.47
2798 4583 2.147150 GCCGATAGCCAAAGAATCTCC 58.853 52.381 0.00 0.00 34.35 3.71
2841 4626 0.977395 GAAGTATATGCCTCCCCGCT 59.023 55.000 0.00 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.