>input_sequence_65698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ATTTAAATCCGAGGGAGCAGACAAAGTTTCTTGAGCGAGAGG--GAGAGAGTTTCCTCCCTCCCACGACGCGC
CCGTGCCCCCCACCACCA----CCACCCCACGCGTCCCGTTCGAATCTCTCACACGGAACTCACGAGCCAGGGACAAGAA
ACCATCGACGAGAACGGGAATGGACGCCGCCGCTGCCGAGAAGGAGGCGGACGCCGGCGGGCCGCGCAAGAAGCCGGC--
----CGCCGG------GAAGCGGTGGGGCGGCGAGGACGACGCGCGGGGGCGCGACGCGTCGCCGGCGGCGCCGCGCGAG
GACGCCGGGCAGGACGGGGCGCTGGCGGAGTGCGCCTTCTCGTGCTGCGTCTTCTGCGCGTGCCTGCCGGTGGCCGTGCT
CTGCTGCGTGGCGCGCGCGCCCGTCCGCGCCGCGCGCCGGTGCTGGCGGCTGAGGTGGCGGCGGCGGCCGGCGCGGCGCC
TCGCGCCGGGCGGGTCGTCGTCCTTCTCCGACGCCGAGCTCGGGGACCTCCGGCAGGGGCGGGTGCGGACAATGGCGGAC
GAGAACAGCGGCCGGGCCGGATCGCCGGCGTCCCCGCGGCAACCGCCCCCTCGCGAGGACCGGAGGAGATAGGTAGCGGG
TTTGTTAGTTTGTTAGGCTGATTGATTTTTC-----TCCAGTTTTGCTGTGATCTGCCAAGTAGGATGATGAGCCGTTTC
GATCTGTGCGGCCTCTTTCTCTTCTTT--------------------TTTTCGCTTTCTTTCATTCTCTCGTTCTCGCCG
TCGGTTAGTGGTTAGCTCACGCCGATGATCAGCCAGAAATTTCGGCAAAGCAAC-AAGGTTGCTGCCCAGTGCACATTCG
GCACCACATTGCCGAGTCCAGAGTTTTCAATCTAGATTGTAGTCTA----------------------------------
-------GATGATTTATTGGTTTGAGATGGTTGCGCCAAAA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr3A_1_TraesCS3A01G261100
GTCTACTGACTTCTTCTCACGGACGCCCCGGACTCCGACGACTACTTCCCCGACGACATGGCTACCGAGGACACCGATTC
CAAGTCCAGTGCTACTGTTGCTGCTGTTGTCCCATACGTGTTCTTGTTTTTTCTGTTAGAGGTTCTGTCACAGTTCCTTG
TTCTAGTCTTTGCCCTAGACATGACAGGTTCTACTTCATATATGCAACTTGGTCTACTGTCTGCTCTAGAGATGTTTGAT
TCTAGTTTATATTTACAGATGTTATTTACCTTCACTCTGTCAGATCGCATGACTTGTTCTATCTCTGCTATTTTAGTCAT
GCTTTATTTATTATTTCTGTTAATAAAATCATATGATAAATTGCTCATATTTCCAACATCCATGACAGTGACAGTGACCA
AATAAAAAGCGAGCGGCGGCCACCACCAGTCCAGCAATGTCGACAGAGACGCCGGTGGCTGGGCGAACAGCCTCGTGCCG
GGCACCGCGGGCCACACCCCTACTCCCGTCCTGTCTCGTGCCCTGCCCGGCGCCCACCGTGCGGCGGCTACGTC------
---------CAGTCCCACAATAATCGATCGCTAATGTGTACACCTGGACCTGGACGGATTAGAGCGTTTTGACCAAGTTT
CTTAGTGGCTGACTGATTAGCACGCCCTACCAGACAAAATATCCCGAGCACTACCATCCGATCACACCGTCACAGTTTTT
GTTGGATCAAAAGAAAGGAGCACTGATCCTACGAATGTGATGCCTTGCCAACAGCTGTCCTGTCCCACTTAACCATCTTT
CGGTTCGCAAATTTAA-TAGAAAAGACCCAGACCCGTAACA----------------------------AGAGTTTAATC
AATCTCTCAAGATTA---TAAGATCCTAATCGATGAAATGACTCCAGGTCGGCTCAGTGGCTACCCTAGCTTAGCTTCCT
TTTGATTTATTTTATCTCCTACCAGTAACCAACAGCGATGGCGAAAAGAGAGAGGAAACCACACGAGACGCTTTCGTGAG
CACCACAATTTAAATCCGAGGGAGCAGACAAAGTTTCTTGAGCGAGAGG--GAGAGAGTTTCCTCCCTCCCACGACGCGC
CCGTGCCCCCCACCACCA----CCACCCCACGCGTCCCGTTCGAATCTCTCACACGGAACTCACGAGCCAGGGACAAGAA
ACCATCGACGAGAACGGGAATGGACGCCGCCGCTGCCGAGAAGGAGGCGGACGCCGGCGGGCCGCGCAAGAAGCCGGC--
----CGCCGG------GAAGCGGTGGGGCGGCGAGGACGACGCGCGGGGGCGCGACGCGTCGCCGGCGGCGCCGCGCGAG
GACGCCGGGCAGGACGGGGCGCTGGCGGAGTGCGCCTTCTCGTGCTGCGTCTTCTGCGCGTGCCTGCCGGTGGCCGTGCT
CTGCTGCGTGGCGCGCGCGCCCGTCCGCGCCGCGCGCCGGTGCTGGCGGCTGAGGTGGCGGCGGCGGCCGGCGCGGCGCC
TCGCGCCGGGCGGGTCGTCGTCCTTCTCCGACGCCGAGCTCGGGGACCTCCGGCAGGGGCGGGTGCGGACAATGGCGGAC
GAGAACAGCGGCCGGGCCGGATCGCCGGCGTCCCCGCGGCAACCGCCCCCTCGCGAGGACCGGAGGAGATAGGTAGCGGG
TTTGTTAGTTTGTTAGGCTGATTGATTTTTC-----TCCAGTTTTGCTGTGATCTGCCAAGTAGGATGATGAGCCGTTTC
GATCTGTGCGGCCTCTTTCTCTTCTTT--------------------TTTTCGCTTTCTTTCATTCTCTCGTTCTCGCCG
TCGGTTAGTGGTTAGCTCACGCCGATGATCAGCCAGAAATTTCGGCAAAGCAAC-AAGGTTGCTGCCCAGTGCACATTCG
GCACCACATTGCCGAGTCCAGAGTTTTCAATCTAGATTGTAGTCTA----------------------------------
-------GATGATTTATTGGTTTGAGATGGTTGCGCCAAAAATAAAGCC---GAGCGCATTACTGTACTCTTACCTCTCC
CATCACTGTCTGCCCTAAAAACACTGGTAGTATG--GGGATCACAGGATTTGTCTCATGGAAAGCTGGTGAAAATTGCGA
GTGGGCACGAACTGCTGCTACCAGCACTGTTAAGGAAAAATGATCCGTTGCAGTTCGTCAGTTAAGAGTCAAACATGGGA
GCCATTATTAAACAACGTCTTAAAATTCTCTCTTTCAGTGAGAGGCCACTGTAATTACTAGTAGTACTGTATTAAACAAC
C-AGGGGGTGTCTGACACGGCGAGCAGTTAATCAAATTAACTTTGTGCTGCCATCCCCACCTGGACGATCAGGAGGTCAG
TGTTAAAAAAACCAGCAGCCTGCCGAAAGGTGCCCCCTCCGAATCCAATCCTAGTTTTGGAGTATCA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCTAGCTAGAAAACACTTTGGAGCATGGCGCATCCCACGAGTCGTCGTGATACGCAGGCACGACGAGA
CATGGCCAGCGTCATGCACGCAGTGCACTCTGCATTTACCT-TTTTTTTTAGAT--------------AACGCTCTTTAT
TTACTTGAGCGGGACGAGACGAGCATCATCACTTCATCAGCAGCCTCACCCCGGTCCGGTCCAGGTCATGCGGGGTCCGA
CGACGAGTCGATGATCCGAGGCCGCGAGCAGTAGGC-GCCGTCCCGTTCAGACGCGCGAACGAGTGGG----GAGAGGCT
CCGCTGGGCAGCGAACCGAGGGTAA-TAACAAATAATTGCTGAAGGCGGACACGCAGGCGCCGTCGCTGTCGACTCGGGT
TTGAGCGTATACTGTGCCGGGTGGCGGTGACGCGGCCGGGGGTGCCGACCCCGCGACAGCCCAGCAAGCTCGGCGCGTTC
GTGCGCGCGTGCAAGCTGCGCCGGAGATTCTTTGGCTATCGGCTGGGTGGGCGACTGTTTTCGGCAGCGGGGAGGCATAT
ACTTCTCCCCGCCCCGCCCACCACGGTTGCAAAAAGAAGACGCGTCACCATCT
>chr3B_379
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TCCATGACAATGACAGTGACTA
AATAAAAAGCGAGCGCCGGCCACCACCAGTCCAGCATTGTCGACAGAGACGCCGGTGGCTGGGCGAACAGCCTCGTGCCG
GGCACCGCGGGCCACACCCTAC------TCCCGTCTCGTGCCCTGCCCGGCGCCCACCGTGCGGCTACGTCCTCCAGTCC
CACAAAGCACAGTCCCAAAATAATCGATCGCTAATGTGTACACCTGGAC------GGATTAGAGCGTTTTGACCAAGTTC
CTTAGTGGCTGACTGATTAGCACGCCCTACCAGACAAAATATCCCGAGCACTACC--------ACACCGTCAG---TTTT
GCTTGATCAAGAAAGGA-------GATCTTGCGAGTGTGATGCTTTGCCAACAGCGGTCCCGTCCCACTTAACCATCTTT
CGGTTCGCAAATTTAAATAGAAAAGACCCAGACCCGTAACA----------------------------ACACTTTAATC
AATCTGTTAAGATTATATTAAGATCCTAATCGATGAAATGACTCCAGGTCGGCTCAGTGGCTACCCCAGCTTAGCTTCCT
TTTGATTTGTTTTATCTCCTACCAGTAACCAACAGCGACGGCGAAAAGAGAGAGGAAACCACACGAGACGCTTTCGTGAG
CACCACAACTTAGATCCGAGGTAGCAAGACAGGTTTCTTGAGAGAGAGGGAGAGAGAGTTTCCTCCCTCCCACGACCTGC
CCGTGCCCCCCACCACCCCCACCC---CCACGCGTCCCGTTCGAATCTCTCGCACGAAACCCACGAGCCAAGGACAAGGG
AAAGCAGCGGCCGAAACGGAATG-----GCCGCCGCCGAGCAGGAGCCGGACGCCGGCGGCCCGCGCAAGAAGCCGGACG
CCGGCGCCGG------GAAGCGGTGGGGCGGCGAGGACGGCGCGCGGAGCCGCGACGCCTCGCCGGCCGCGCCCCGCGAG
GACGCCGGGAAGGACGGGGCGCTGGCGGAGTGTGCCGTCTCGTGCTGCGTCTTCTGCGCGTGCCTGCCGGTGGCCGTGCT
CTGCTGCGTGGCGCGCGCGCCCGTCCGCGCCGCGCGCCGGTGCTGGCGGCTGAGGCGGCGGCGGCGGCCGGCGCGGCGCC
TCGCGCCCGGAGGGTCCTCGTCCTTCTCCGACGCCGAGCTCGGGGACCTCCGGCAGGGGCGGGTGCGGACAATGGCGGAC
GAGGACGGCG---GGGCCGGATCGCCGGCGTCCCCGCGGCAACCGCCCCCGCGGGAGGATCGGAGGAGATAGGTAGCGAG
TTTGTTA----GTTAGGCTGATTGATTTTTCTCCAGTCCAGTTTTGCTGTGATCTGCCAAGTAGGATGC---GCCGTTTC
GATCTGTCCGGCCTCTCTCTTTCTCGTTTCCTTTCCTTTTGATG--------------------------ATTCTCGCCG
TCGGTTCGTGGTTAGCTCACGACGATGATCAGCCAGAAATTTCGGCAAAGAAGCAAAGGTTGCTGCCCAGTGCACATTCG
GCACCACATTGCCTT--------------------------GTCTA----------------------------------
-------GATGATTTATTGCTTT--GATGGTTGCGCCAAAAATAAAGCC---G----CATTACTGTATCCTTACCTCTCC
CATCACTGTCAGCCCTAAAAACACTGGTAGTGGTATGGTGTCACAGGATTTATCTCATGGAAAGCTGGTGAAAATTCCGA
GTCGGCACGAACTGCTGCTACCAGCACTGTTCAGGAAAAATGATCCGTTGCAGTTCGTCAGTTAAGAGTCAAACATGCGA
GCCATTATTAAACAACGTCTTAA--TTCTCTCTTTCGGTGAGAGGCCACTGTAATTACTAGTG-----GTATTAAACAAC
CAAGGGGGTGTCTGACACGGCGAGCAGTTAA-CAAAATAACTTTGTGCTGCTATCCCCACCTGGACGATGAGGAGGTCAG
TGTTAAAAAAAACAGCAGCCTGCCGAAAGGTGCCCCCTCCGAATCCAATCCTAGTTTTGGAGCATCAGGGAATCAACAGC
CGCACTTTTGGGACACACACAAACATGGTTGAACGCCCAAGGCAATCCCAAGCTCCAGCAGCGTGGACTAGACTCTGAAA
ACTAAATATACCACGTAAAGTTTCGATATTTTGCTGGCGTGCTCTTCATGGAATCATCCCTCTAAAATCCATACTGATGA
ACAGGCATGTGGGATCGGATGGTCTTGTCCGATTTGTCATGGAGCTGCTGAGGATATAAAATATCTTCTTTTTGAATGTT
TCACCGCCAGAGAACTTTGGAGAGGCCTGGGCATATTGGAAATTATTGACGGAGCTGCAACGGTGGATCGCTCCGGTTCG
GTAATATTGAAGCATTTACTGTTGGCAGAGGATAAGCCAGTTCCAATGAAGCCGGACTTGGATATTAAACAAATTCTTGT
TGTTGGTAGTTGATACCTCTGGTGGACTCGTCGCCAACACACTCATGATGGAGCAACAACCCCGCCAATGAGATGGCCTA
TGTCTGTCCTAGCAATTGCGAACCATTTTCATCAAGCAAATGAGAAGAACAGGGTGACAAATGAACAAAGATGGTTGAAA
CCCAGTTCAAATTTTGTTAAGTTAAATGTAGATGCCTCCTTCTATGCGGATGAGGGTGCTGGAGCATCGGCGTCAATCCT
TAGAGATGAGAAGGGTAATTTTTTGGCAGCTCAGTGCAAATATATTCAGTATGCATCTGATGTAGTAACCTCGGAAGCTA
TGGCGATGAGAGATGGATTGATCTTTGCAAGCTCATTAGGATTCAACAGGGTGGAGGCAGAGTCAGATTCTTCAATTGTT
ATTGACTATTGCTCGGGACAGACAGAATGGTGGGATTTGGCTGCAGCAGTATTTGCGGAATGCGTTGACGTGTCTTTATC
AATTGGGAAGGTTATCTTTAAACATTGTGCTCGTTCTTCGAATCAAGCGGCGCATGTGCTAGCTAGTTACTGTTTTTGTA
ATAAGATTTGTAGTTCATGGACTTATGAGCCCCCGACTTGTCTGGTTTCCAAACTCATAGACGATGTAATTCCTATTTGA
AATCAATAAAGCCAGCCATGATGGCCTTCCCTCAAAAAAAAGGCGCACTTAAGAAATCCGATCCTCTAAACCATCGTGGA
CACGTCCGGCCATGTCTGCTTTAAGCTTCTATTTATGCGTTCATGCAGCCATATTTCACATTTTTCTT------------
-----------------------------------CTTATATTCCGGTCACTTGCATGTGACTGATGAAGATGGAGAGAA
AGAAAGAAAAGATAGAGAAAAAATGGTTTGGAGTGGGTCACGTCCTACATGGCGGACTTACCGGGCGTCTAGAAGA----
--------------------------------------------------------------CCTCATATAGTCCTTACA
TTTGATCTCAATATAGGGTCC-GCTGACAATGTGGACATATAGCGATGACATAAGGAGTTCGGTTCGGTCATTCTTTTCC
TTCACTCTGCTGTCCGGTCACCGGCAGGACGCGCTCGCGGATGTTTGAGGAGGCCGG--------------GGTTGTAGA
TGCTTC-GCCTACCAACCTAGAAAAAACTTTGGAGCAGGGTGTA--CCACGAGTTGTCTTGATACGCGGGCACGACGCGA
CATGGCATGCATCGTGCACCCAGTTCACTCTTTATTTACCCCTTTTTTTTACAG--------------AACACTCTTTAT
TTACTTGAGCGGTACGAGACGAGCCTCATCGCTTCGTCAGC-GTCTCACCCTGGTCCAGTCCAGGTCATGCCGGTTCCGA
CGATGAGTCGATGATCCGAGGCCGCAGGCAGGAGGCGGCCGTCCCGTCCAGACGCGCAAACGAGTGAGTGGAGAGAGGCT
CCGTCGGGCAGCGAACCCAGGGTAA-TAATTGCG-------GAAGGCGGACACGCAGGCGCCGTCGCTGTCGACTCGGGC
T-------------TGCCGGGTGGCGGTGACGCGGCCGGGGG-GCCGACCCCGCGACAGCAAAGCTAGCTCGGCGCGTCC
GTGTGCGCGTGCAAGATGCGCCCGAGATTCTTTGGCTATCGGCTGGGTGGGCGACTGTTTTCGGCCGCGGGGAGGCATAT
ACCTTCT----CCCCGCCCACCACGGTTGCAAAAAGGAGGCGCGTCACC----
>chr3D_379
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TCCATGACAATGACAGTGACCG
AATAAAAAGCGAGCGCCGGCCACCACCAGTCCAGCAACGTCGACAGAGACGCCGGTGGCTGCGCGAACAGCCTCGTGCCG
GGCACCGGGGGCCACACCCTAC------TCCCGTCTCGTGCCCTGCCCGGCGCCCACCGTGCGGCTACGTCCAGTCC---
--CACAGCACAGTCCCACAATAATCGATCATTAATGTGTACACCTGGAC------GGATTAGAGCGTTTTGACCAAGTTT
CTTAGTG--------------------------------------------------------------TCAG---TTTT
GCTGGATCAAGAAAGGA-------GATCTTCCGAGTGTGATGCCTCGCCAACAGCTGTCCTATCCCACTTAACCATCTTT
CGGTTCGCAAATCCAAATAGAAAAGACCCAGACCCCAAGCCACACTTTAATCTTTTTTTAAGCTAAGCCACACTTTAATC
AATCTCTTAGGATTA---TAAGATCCTAATCGATGAAATGACTCCAGGTCGGCTCAGTGGCTACCCTAGCTTAGCTTCCT
TTTGATTTGTTTTATCTCCTACCAGTAACCAACAGCGATGGCGAAAAGAGGGAGGAAACCACACGAGACGCTTTCGTGAG
CACCGCAATTTAAATCCGAGGGAGCGGACAAAGTTTCTTGAGAGAGAGC-----------TCCTCCCTCCCACGACGCGC
CCGTGCCCCCCACCACCA----CC---CCACGCGTCCCGTTCGAATCTCTCACACGAAACCCACGAGCCAGGGACAAGAA
ACCATCGACGAGAACGGGAATGGACGCCGCCGCTGCCGAGAAGGAGACGGACGCCGGCGGGCCACGCAAGAAGCCGGC--
----CGCCGGCGCCGGGAAGCGGTGGGACGGCGAGGGCGCCGCGCGGGGCCGCGACGACTCGCCGGCGGCGCCCCGCGAG
GACGCCGGGAAGGACGGGGCGCTGGCGGAGTGCGCCGTCTCGTGCTGCGTCTTCTGCGCGTGCCTGCCCGTGGCCGTGCT
CTGCTGCGTGGCGCGCGCGCCCGTCCGCGCCGCGCGCCGGTGCTGGCGGCTGAGGCGGCGGCGGCGCCCGGCGCGGCGCC
TCGCGCCCGGAGGGTCCTCGTCCTTCTCCGACGCCGAGCTCGGGGACCTCCGGCAGGGGCGGGTGCGGACAATGGCGGAG
GAGGACAACGGCCGGGCCGGATCGCCGGCGTCTCCGCGGCAACCGCCCCCGCGGGAGGATCGGAGGAGATAGGTAGCGAG
TTTGTTA----GTTAGGCTGATTGGTTTTTC-----TCCAGTTTTGCTGTGATCTGCCAAGTAGGATGATGAGCCGTTTC
GATCTGTGCGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCGCTTTCTTTCATTCTCTCATTCTCGCCG
TCGGTTAGTGGTTAGCTCACGCCGATGATCAGCCAGAAATTTCGGCAAAGAAGCAA-GGTTGCTGCCCAGTGCACATTCG
GCACCACATTGCCTT--------------------------GTCCAGATTTTTCAATCTACTGTAGATTGTAGTCTAGAT
GATTTGGGATGATTTATTGGTTTGAGATGGTTGCGCCAAAAATAAAGCGAGTG----CATTACTGTACTCTTACCTCTCC
CATCACTGTCTGCCCTAAAAACACTGGTAGTGGTATGGTATCACGGGCTTTATCTCATGGAAAGCCGGTGAAAACTGCGA
GTGGGCACGAACTGCTGCTACCAGCACTGCTGAGGAAAAATGACCCGTTGCAGTTCGTCAGTTAAGAGTCAAACATGCGA
TCCATTATTAAACAACGTCTTAA--TTCTCTCTTTCAATGAGAGGCCACTGCAATTACTACCA-----GTATTAAACAAC
CAAGGGGGTGTCTGACACGGCGAGCAGTTAA-CAAATTAACTTTGTACTGCCATCCCCACCTGGACGATCAGGAGGTCAG
TGTTAAAGAAACCAGCAGCCTGCCGAAAGGTGCCCCCTCCGAATCCAATCCTAGTTTTGGAGCATCAGAGAATCGACAGC
CCTACTTAGCAAACTCGGCCCTCTAAACGACACTCCCGGTTAGTGTCGGGGTGTGTCCGTTTGAGACTTGCTACACGGAC
GACACTTCACTGACGATACACGCACGACGCTGCATATCCCACCATCCATGCAAAAGACCAAA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CTGCAGAAAGCTGTTAGATTAGCCATCGTGCAAGCATCGTCCCAGCAAACGTCGTGTGTGAAGTA
ATTTCGGTCCGTTTTGCCATACTGTTCACTTTATCCTTATATTCCGGTCATTTGTATGTGATTGGTGAAGATAAAGTGAA
-----------------AAAAAAAGGTATGGAGTGGTCCACCTCTTACGTGGCGGATTTACTGGGTCGTCTACGATCCCT
CGTATCCTCCCTGCATTTGACATTTGATCTTAATACGAGAATTTACTGGGTCGTCTGCGATCCCTCGTATCCTCCCTGCA
TTTGATCTTAATACGAGGATTTGCTGACAGTTTGGATGTATAGTGATGATATAAAAAGTCCGATTGGGCCCTTTTTTTTC
TTCGCTCTGTTGTCCGGTCACTGACATGGCA---------ATGTTTGAGGAGGCTGGCTGGCTGGCTGGCTGGCTGTAGA
TGCTCTTGCCTAACTACCTAGAAAAAACTTTGGAGCATGGCGTA--CCACGAGTTGTCTTGATACGCGGGCACGCCGCGA
CATGGCATGCATTGTGCAAGCAGCGCACTCTTTATTTACTACGCACCCCTTTTTCATTCCTAGATAGAAACACTCTTTAT
TTACTCGAGCGGGACGAGACGAGCATCATCACTTAATCAGC-GCCTCGCCCCGGTCCAGTCCAGGTCACGCGGTGTCCGA
CAATGAGTCGATGATCCGAGGCCGCGA----------GCAGTCCCGTCCAGACGCGCGAACGAGTGAGTGGAGAGAGACT
CCGCCGGGCAGCGAACCGAGGGTAATTAATTGCG-------CAAGGCGGACACGCAGGTGCCGTCGCTGTCGACTCGGGC
T-------------TGCCGGGTGGCGGTGACGCGGCCGGGG-TGCCGACCCCGCGACAGCAAAGCTAGCTCGGCGCGTCC
GAGTGCGCGTGCAAGCTGCGCCCGAGATTCTATGGATATCGGTTGGGTGGGC----------------------------
-----------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S------------
---------------S----------------------------------------------------------------
-------------------SSSSSSSSS---S---------------------------------SS-SS-S--------
-------------------------------------------------SSSSSS-------------------------
-------------------------------------------------------SSSSSSSS---------SSSS----
-S--------S-S-SSSSSSSSSS----S-S---S---------------------------------------------
----------------------------------------------------------------------S-S-------
-------S------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
------------------------------------------S-------------------------------------
------------------------SSS-----------------------------S---S-------------------
----------------------------------------------S---------------------------------
---------------------------------------S---------S--------S--------------S------
---------S--------------------------S-------------------------------------------
-------------------------------------------------------S------------------------
-------S--S-----S---------------------------------------------------------------
---S----------------------------------------------S--S-----S------------------S-
-------SSSS---------------------------------------------------------------------
----------------S-----SSS---------------------------------------------S---------
--------------------------------------------------S-S---------------------------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
-----------------------------------------------------SSSS-----------------------
-------------------------------SSS----S------------S----------------------------
-------------------------------S---------------------------------------------S--
-----------------------SS--------------------------------------SSSSS------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S--------S----------------S-SS--------S---S--------S---------S--
------SS--S--S-----------------SS-------S----------S-------------------S--------
-----------------------------------------S---------------S----------------------
---S---------------------------S---------------S------------------S-------------
----S------------------------SSSSSSSSSSSS--------------------------------------S
-SSSSSSSSSSSSS----------------------------------------------SS---S------------S-
---S------------------S------------------------------------------S--------------
--S-SSSSSSS-------------------------S--S---------SSSS
>forward_93
-------------------------------------------------------------------------CCGATTC
CAAGTCCAGTGCT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1654
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGAGGACCGGAGGAGATAGG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_703
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CCGAGCACTACCATCCGATC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CCGGAGGAGATAGGTAGCGG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_714
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CATCCGATCACACCGTCACA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1831
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTTCTCGCCG
TCGGTTAGTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1785
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTGCGGCCTCTTTCTCTTCT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_4626
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AGCGGGGAGGCATAT
ACTTC------------------------------------------------
