Multiple sequence alignment - TraesCS3A01G244700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G244700 chr3A 100.000 3669 0 0 1 3669 457889453 457893121 0.000000e+00 6776.0
1 TraesCS3A01G244700 chr3A 96.432 2747 64 11 567 3311 457795464 457798178 0.000000e+00 4499.0
2 TraesCS3A01G244700 chr3A 84.916 358 45 7 215 565 457794811 457795166 1.620000e-93 353.0
3 TraesCS3A01G244700 chr3A 89.695 262 12 2 3423 3669 154259235 154258974 1.640000e-83 320.0
4 TraesCS3A01G244700 chr3A 90.498 221 19 2 1 220 309971806 309972025 1.290000e-74 291.0
5 TraesCS3A01G244700 chr3B 91.398 1802 89 39 1053 2805 444829015 444827231 0.000000e+00 2409.0
6 TraesCS3A01G244700 chr3B 88.679 212 7 5 3421 3617 803094363 803094572 3.660000e-60 243.0
7 TraesCS3A01G244700 chr3B 93.443 61 4 0 654 714 303948146 303948086 1.400000e-14 91.6
8 TraesCS3A01G244700 chr3D 93.164 1492 50 21 1053 2499 345718226 345716742 0.000000e+00 2143.0
9 TraesCS3A01G244700 chr3D 93.213 221 9 2 2607 2821 345716448 345716228 1.640000e-83 320.0
10 TraesCS3A01G244700 chr3D 89.695 262 12 2 3423 3669 581576618 581576357 1.640000e-83 320.0
11 TraesCS3A01G244700 chr6A 91.573 356 27 3 3068 3422 591796645 591796292 4.260000e-134 488.0
12 TraesCS3A01G244700 chr6A 89.498 219 20 3 4 220 473159269 473159052 1.300000e-69 274.0
13 TraesCS3A01G244700 chr6A 91.667 60 3 2 3036 3095 15867674 15867731 8.440000e-12 82.4
14 TraesCS3A01G244700 chr7A 92.857 336 20 4 3096 3430 46245012 46245344 5.510000e-133 484.0
15 TraesCS3A01G244700 chr7A 88.253 332 29 7 3091 3421 580235108 580234786 4.440000e-104 388.0
16 TraesCS3A01G244700 chr7A 89.313 262 13 2 3423 3669 82669535 82669796 7.650000e-82 315.0
17 TraesCS3A01G244700 chr7A 89.313 262 13 2 3423 3669 504778096 504778357 7.650000e-82 315.0
18 TraesCS3A01G244700 chr7A 93.878 49 2 1 393 440 532683940 532683988 5.080000e-09 73.1
19 TraesCS3A01G244700 chr7B 89.645 338 31 4 3091 3426 537512896 537513231 9.420000e-116 427.0
20 TraesCS3A01G244700 chr7B 100.000 44 0 0 3052 3095 653190759 653190716 8.440000e-12 82.4
21 TraesCS3A01G244700 chr7B 100.000 44 0 0 3052 3095 653250941 653250898 8.440000e-12 82.4
22 TraesCS3A01G244700 chr7B 100.000 44 0 0 3052 3095 653301745 653301702 8.440000e-12 82.4
23 TraesCS3A01G244700 chr1A 92.015 263 6 2 3422 3669 349255530 349255792 4.510000e-94 355.0
24 TraesCS3A01G244700 chr1A 94.495 218 11 1 1 217 447741429 447741646 5.870000e-88 335.0
25 TraesCS3A01G244700 chr1A 90.164 61 4 2 3036 3095 561307654 561307713 1.090000e-10 78.7
26 TraesCS3A01G244700 chr2D 91.085 258 8 4 3423 3665 74080131 74079874 5.870000e-88 335.0
27 TraesCS3A01G244700 chr2D 83.721 86 14 0 645 730 636780103 636780188 8.440000e-12 82.4
28 TraesCS3A01G244700 chr5A 92.576 229 15 2 4 231 33953357 33953130 9.820000e-86 327.0
29 TraesCS3A01G244700 chr5A 92.889 225 15 1 1 224 595128815 595129039 3.530000e-85 326.0
30 TraesCS3A01G244700 chr5A 96.226 53 2 0 3043 3095 608804883 608804831 1.820000e-13 87.9
31 TraesCS3A01G244700 chr6D 89.695 262 11 3 3423 3669 459285825 459286085 1.640000e-83 320.0
32 TraesCS3A01G244700 chr2B 92.593 216 15 1 4 219 152469628 152469414 3.560000e-80 309.0
33 TraesCS3A01G244700 chr2B 87.619 210 10 7 3423 3617 227674196 227673988 2.850000e-56 230.0
34 TraesCS3A01G244700 chr2B 81.679 262 37 7 3162 3421 656368993 656369245 1.340000e-49 207.0
35 TraesCS3A01G244700 chr5D 91.284 218 18 1 4 220 55832093 55831876 2.770000e-76 296.0
36 TraesCS3A01G244700 chr5D 90.909 220 17 3 4 221 520425808 520425590 3.580000e-75 292.0
37 TraesCS3A01G244700 chr5D 87.324 213 12 3 3420 3617 513228769 513228981 2.850000e-56 230.0
38 TraesCS3A01G244700 chr1B 90.741 216 20 0 5 220 152847761 152847976 4.640000e-74 289.0
39 TraesCS3A01G244700 chr1D 89.252 214 7 3 3420 3617 142709280 142709493 1.690000e-63 254.0
40 TraesCS3A01G244700 chr7D 89.048 210 8 2 3423 3617 515353750 515353541 2.830000e-61 246.0
41 TraesCS3A01G244700 chr7D 84.229 279 14 12 3419 3669 103187989 103187713 1.020000e-60 244.0
42 TraesCS3A01G244700 chr7D 84.364 275 13 12 3423 3669 103193410 103193138 3.660000e-60 243.0
43 TraesCS3A01G244700 chr5B 85.238 210 14 5 3423 3617 158714726 158714519 2.230000e-47 200.0
44 TraesCS3A01G244700 chr5B 85.083 181 24 3 476 653 126154597 126154417 8.090000e-42 182.0
45 TraesCS3A01G244700 chr5B 88.750 80 9 0 651 730 521292738 521292659 8.390000e-17 99.0
46 TraesCS3A01G244700 chr5B 88.750 80 9 0 651 730 521301470 521301391 8.390000e-17 99.0
47 TraesCS3A01G244700 chr5B 88.750 80 9 0 651 730 521327720 521327641 8.390000e-17 99.0
48 TraesCS3A01G244700 chr5B 92.982 57 3 1 3040 3095 311780369 311780313 8.440000e-12 82.4
49 TraesCS3A01G244700 chr6B 81.356 236 30 5 3108 3343 46082786 46083007 2.910000e-41 180.0
50 TraesCS3A01G244700 chr6B 98.039 51 1 0 3045 3095 126924393 126924443 5.050000e-14 89.8
51 TraesCS3A01G244700 chr4D 95.604 91 4 0 3423 3513 358435653 358435743 2.950000e-31 147.0
52 TraesCS3A01G244700 chrUn 87.209 86 11 0 645 730 328882249 328882334 8.390000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G244700 chr3A 457889453 457893121 3668 False 6776.0 6776 100.0000 1 3669 1 chr3A.!!$F2 3668
1 TraesCS3A01G244700 chr3A 457794811 457798178 3367 False 2426.0 4499 90.6740 215 3311 2 chr3A.!!$F3 3096
2 TraesCS3A01G244700 chr3B 444827231 444829015 1784 True 2409.0 2409 91.3980 1053 2805 1 chr3B.!!$R2 1752
3 TraesCS3A01G244700 chr3D 345716228 345718226 1998 True 1231.5 2143 93.1885 1053 2821 2 chr3D.!!$R2 1768

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 1276 0.108138 AGGCGTCATCTTAAAGCGCT 60.108 50.0 2.64 2.64 46.2 5.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2981 3534 1.147191 GACCCTTTGTCCTCCCCTTTT 59.853 52.381 0.0 0.0 38.09 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.425577 TGTAAATTTAGATTTTCCGGGTCG 57.574 37.500 0.00 0.00 36.82 4.79
24 25 5.354792 TGTAAATTTAGATTTTCCGGGTCGG 59.645 40.000 0.00 0.00 40.97 4.79
25 26 4.883006 TAAATTTAGATTTTCCGGGTCGGG 59.117 41.667 0.00 0.00 40.52 5.14
26 27 5.339035 TAAATTTAGATTTTCCGGGTCGGGA 60.339 40.000 0.00 0.00 40.52 5.14
27 28 7.352365 TAAATTTAGATTTTCCGGGTCGGGAC 61.352 42.308 0.00 0.00 40.52 4.46
41 42 4.521062 GGACGAGCTGCGCCAGAT 62.521 66.667 4.18 0.07 46.04 2.90
42 43 2.959071 GACGAGCTGCGCCAGATC 60.959 66.667 4.18 9.97 46.04 2.75
43 44 3.706563 GACGAGCTGCGCCAGATCA 62.707 63.158 19.77 0.00 45.80 2.92
44 45 2.960659 CGAGCTGCGCCAGATCAG 60.961 66.667 19.77 11.63 45.80 2.90
45 46 2.498248 GAGCTGCGCCAGATCAGA 59.502 61.111 16.58 0.00 44.99 3.27
46 47 1.882167 GAGCTGCGCCAGATCAGAC 60.882 63.158 16.58 0.03 44.99 3.51
47 48 2.894387 GCTGCGCCAGATCAGACC 60.894 66.667 4.18 0.00 32.44 3.85
48 49 2.202987 CTGCGCCAGATCAGACCC 60.203 66.667 4.18 0.00 32.44 4.46
49 50 3.746949 CTGCGCCAGATCAGACCCC 62.747 68.421 4.18 0.00 32.44 4.95
50 51 4.899239 GCGCCAGATCAGACCCCG 62.899 72.222 0.00 0.00 0.00 5.73
51 52 4.899239 CGCCAGATCAGACCCCGC 62.899 72.222 0.00 0.00 0.00 6.13
52 53 3.785859 GCCAGATCAGACCCCGCA 61.786 66.667 0.00 0.00 0.00 5.69
53 54 2.989639 CCAGATCAGACCCCGCAA 59.010 61.111 0.00 0.00 0.00 4.85
54 55 1.299648 CCAGATCAGACCCCGCAAA 59.700 57.895 0.00 0.00 0.00 3.68
55 56 0.322456 CCAGATCAGACCCCGCAAAA 60.322 55.000 0.00 0.00 0.00 2.44
56 57 0.804989 CAGATCAGACCCCGCAAAAC 59.195 55.000 0.00 0.00 0.00 2.43
57 58 0.322546 AGATCAGACCCCGCAAAACC 60.323 55.000 0.00 0.00 0.00 3.27
58 59 1.644786 GATCAGACCCCGCAAAACCG 61.645 60.000 0.00 0.00 0.00 4.44
59 60 2.119484 ATCAGACCCCGCAAAACCGA 62.119 55.000 0.00 0.00 0.00 4.69
60 61 2.281276 AGACCCCGCAAAACCGAC 60.281 61.111 0.00 0.00 0.00 4.79
61 62 3.359523 GACCCCGCAAAACCGACC 61.360 66.667 0.00 0.00 0.00 4.79
62 63 4.960866 ACCCCGCAAAACCGACCC 62.961 66.667 0.00 0.00 0.00 4.46
65 66 2.357275 CCGCAAAACCGACCCGTA 60.357 61.111 0.00 0.00 0.00 4.02
66 67 1.960250 CCGCAAAACCGACCCGTAA 60.960 57.895 0.00 0.00 0.00 3.18
67 68 1.505477 CCGCAAAACCGACCCGTAAA 61.505 55.000 0.00 0.00 0.00 2.01
68 69 0.307146 CGCAAAACCGACCCGTAAAA 59.693 50.000 0.00 0.00 0.00 1.52
69 70 1.268437 CGCAAAACCGACCCGTAAAAA 60.268 47.619 0.00 0.00 0.00 1.94
70 71 2.387185 GCAAAACCGACCCGTAAAAAG 58.613 47.619 0.00 0.00 0.00 2.27
71 72 2.859419 GCAAAACCGACCCGTAAAAAGG 60.859 50.000 0.00 0.00 0.00 3.11
72 73 0.953727 AAACCGACCCGTAAAAAGGC 59.046 50.000 0.00 0.00 0.00 4.35
73 74 0.179023 AACCGACCCGTAAAAAGGCA 60.179 50.000 0.00 0.00 0.00 4.75
74 75 0.886043 ACCGACCCGTAAAAAGGCAC 60.886 55.000 0.00 0.00 0.00 5.01
75 76 0.885596 CCGACCCGTAAAAAGGCACA 60.886 55.000 0.00 0.00 0.00 4.57
76 77 1.161843 CGACCCGTAAAAAGGCACAT 58.838 50.000 0.00 0.00 0.00 3.21
77 78 1.538075 CGACCCGTAAAAAGGCACATT 59.462 47.619 0.00 0.00 0.00 2.71
78 79 2.413634 CGACCCGTAAAAAGGCACATTC 60.414 50.000 0.00 0.00 0.00 2.67
79 80 1.890489 ACCCGTAAAAAGGCACATTCC 59.110 47.619 0.00 0.00 0.00 3.01
80 81 1.135517 CCCGTAAAAAGGCACATTCCG 60.136 52.381 0.00 0.00 0.00 4.30
81 82 1.538075 CCGTAAAAAGGCACATTCCGT 59.462 47.619 0.00 0.00 0.00 4.69
124 125 4.783621 TGCGGGGTCTGCATCTGC 62.784 66.667 0.00 0.00 37.44 4.26
131 132 4.819761 TCTGCATCTGCGGCCGTC 62.820 66.667 28.70 19.46 46.62 4.79
161 162 2.539020 CAAAAGCGGTTTTGCGCG 59.461 55.556 32.29 14.91 44.56 6.86
162 163 1.941734 CAAAAGCGGTTTTGCGCGA 60.942 52.632 32.29 0.00 44.56 5.87
163 164 1.226717 AAAAGCGGTTTTGCGCGAA 60.227 47.368 23.38 5.81 40.67 4.70
164 165 1.476235 AAAAGCGGTTTTGCGCGAAC 61.476 50.000 23.38 13.55 40.67 3.95
165 166 2.331019 AAAGCGGTTTTGCGCGAACT 62.331 50.000 12.10 8.96 40.67 3.01
166 167 2.982038 AAGCGGTTTTGCGCGAACTG 62.982 55.000 23.39 23.39 40.67 3.16
167 168 3.091022 CGGTTTTGCGCGAACTGC 61.091 61.111 12.10 10.64 41.47 4.40
168 169 2.025441 GGTTTTGCGCGAACTGCA 59.975 55.556 12.10 0.00 46.97 4.41
173 174 3.338674 TGCGCGAACTGCAAATGA 58.661 50.000 12.10 0.00 46.97 2.57
174 175 1.207339 TGCGCGAACTGCAAATGAG 59.793 52.632 12.10 0.00 46.97 2.90
175 176 1.207593 GCGCGAACTGCAAATGAGT 59.792 52.632 12.10 0.00 46.97 3.41
176 177 0.385974 GCGCGAACTGCAAATGAGTT 60.386 50.000 12.10 0.00 46.97 3.01
177 178 1.925946 GCGCGAACTGCAAATGAGTTT 60.926 47.619 12.10 0.00 46.97 2.66
178 179 2.384382 CGCGAACTGCAAATGAGTTTT 58.616 42.857 0.00 0.00 46.97 2.43
179 180 2.151736 CGCGAACTGCAAATGAGTTTTG 59.848 45.455 0.00 0.00 46.97 2.44
185 186 2.826277 CAAATGAGTTTTGCGGGCC 58.174 52.632 0.00 0.00 38.42 5.80
186 187 1.008361 CAAATGAGTTTTGCGGGCCG 61.008 55.000 24.35 24.35 38.42 6.13
187 188 2.153547 AAATGAGTTTTGCGGGCCGG 62.154 55.000 29.48 9.71 0.00 6.13
206 207 3.161450 GGGATGCGGGGTCTGCTA 61.161 66.667 0.30 0.00 0.00 3.49
207 208 2.423446 GGATGCGGGGTCTGCTAG 59.577 66.667 0.30 0.00 0.00 3.42
208 209 2.134287 GGATGCGGGGTCTGCTAGA 61.134 63.158 0.00 0.00 0.00 2.43
209 210 1.365633 GATGCGGGGTCTGCTAGAG 59.634 63.158 0.00 0.00 0.00 2.43
210 211 1.381872 ATGCGGGGTCTGCTAGAGT 60.382 57.895 0.00 0.00 0.00 3.24
211 212 0.978146 ATGCGGGGTCTGCTAGAGTT 60.978 55.000 0.00 0.00 0.00 3.01
212 213 1.153549 GCGGGGTCTGCTAGAGTTG 60.154 63.158 0.00 0.00 0.00 3.16
213 214 1.153549 CGGGGTCTGCTAGAGTTGC 60.154 63.158 0.00 0.00 0.00 4.17
214 215 1.608717 CGGGGTCTGCTAGAGTTGCT 61.609 60.000 0.00 0.00 0.00 3.91
215 216 0.176910 GGGGTCTGCTAGAGTTGCTC 59.823 60.000 0.00 0.00 0.00 4.26
216 217 1.190643 GGGTCTGCTAGAGTTGCTCT 58.809 55.000 4.02 4.02 43.83 4.09
217 218 2.379972 GGGTCTGCTAGAGTTGCTCTA 58.620 52.381 0.00 5.84 41.50 2.43
218 219 2.761208 GGGTCTGCTAGAGTTGCTCTAA 59.239 50.000 7.22 0.00 41.74 2.10
219 220 3.181480 GGGTCTGCTAGAGTTGCTCTAAG 60.181 52.174 7.22 3.73 41.74 2.18
252 253 1.824658 GCAGAGAGCAGAGCTGGAT 59.175 57.895 0.00 0.00 44.79 3.41
253 254 0.531090 GCAGAGAGCAGAGCTGGATG 60.531 60.000 0.00 0.00 44.79 3.51
286 287 3.131478 GGCCTGCAACGCGGTTAT 61.131 61.111 12.47 0.00 32.22 1.89
288 289 2.395360 GCCTGCAACGCGGTTATCA 61.395 57.895 12.47 0.00 32.22 2.15
292 293 0.371989 TGCAACGCGGTTATCAATCG 59.628 50.000 12.47 0.00 0.00 3.34
321 322 1.796459 GGTGTGAACGTGGTATGTCAC 59.204 52.381 8.52 8.52 0.00 3.67
328 329 5.636121 GTGAACGTGGTATGTCACATCTAAA 59.364 40.000 10.20 0.00 37.50 1.85
333 334 7.047891 ACGTGGTATGTCACATCTAAATTGAT 58.952 34.615 0.00 0.00 37.50 2.57
395 400 9.674068 TTTGTTGCTACATTATATACTTGTGGA 57.326 29.630 0.81 1.23 33.44 4.02
397 402 9.674068 TGTTGCTACATTATATACTTGTGGAAA 57.326 29.630 10.74 5.55 0.00 3.13
416 421 9.967451 TGTGGAAACTTAAATATGACATCCTTA 57.033 29.630 0.00 0.00 0.00 2.69
482 488 4.759693 AGTGGATCATAAAAACGAGTTGCA 59.240 37.500 0.00 0.00 0.00 4.08
484 490 4.098416 GGATCATAAAAACGAGTTGCAGC 58.902 43.478 0.00 0.00 0.00 5.25
488 494 1.014352 AAAAACGAGTTGCAGCGTCT 58.986 45.000 10.93 0.00 40.23 4.18
494 500 0.108424 GAGTTGCAGCGTCTGGAGAT 60.108 55.000 8.57 0.00 32.58 2.75
496 502 0.108424 GTTGCAGCGTCTGGAGATCT 60.108 55.000 0.00 0.00 32.58 2.75
500 506 2.197577 GCAGCGTCTGGAGATCTAAAC 58.802 52.381 0.00 0.00 31.21 2.01
523 529 4.769488 CCTAGACTCTAATGCCATGCTAGA 59.231 45.833 0.00 0.00 0.00 2.43
527 533 6.054295 AGACTCTAATGCCATGCTAGAAAAG 58.946 40.000 0.00 0.00 0.00 2.27
653 957 7.038231 ACAAATACTCCTTAACACTTCTAGGCT 60.038 37.037 0.00 0.00 0.00 4.58
659 963 4.323104 CCTTAACACTTCTAGGCTGAGCTT 60.323 45.833 3.72 0.00 0.00 3.74
705 1009 4.033776 ATGGCCGAGTGGGTGGTG 62.034 66.667 0.00 0.00 38.44 4.17
715 1019 1.850289 TGGGTGGTGTGGTGGCTAT 60.850 57.895 0.00 0.00 0.00 2.97
722 1026 0.530744 GTGTGGTGGCTATCGTCTCA 59.469 55.000 0.00 0.00 0.00 3.27
724 1028 1.831106 TGTGGTGGCTATCGTCTCAAT 59.169 47.619 0.00 0.00 0.00 2.57
732 1036 4.401202 TGGCTATCGTCTCAATGTTCTACA 59.599 41.667 0.00 0.00 0.00 2.74
738 1042 3.119743 CGTCTCAATGTTCTACACCGGTA 60.120 47.826 6.87 0.00 0.00 4.02
742 1046 1.563924 ATGTTCTACACCGGTAGGCA 58.436 50.000 6.87 5.91 45.76 4.75
744 1048 0.459759 GTTCTACACCGGTAGGCAGC 60.460 60.000 6.87 0.00 45.76 5.25
748 1052 1.884075 TACACCGGTAGGCAGCTGTG 61.884 60.000 16.64 5.34 41.49 3.66
765 1069 0.179018 GTGTTCTTGCCTGACCCACT 60.179 55.000 0.00 0.00 0.00 4.00
775 1079 2.427506 CCTGACCCACTAAGTCAAAGC 58.572 52.381 0.00 0.00 43.36 3.51
784 1088 4.312443 CACTAAGTCAAAGCCGGAGTTTA 58.688 43.478 5.05 0.00 0.00 2.01
801 1105 1.165284 TTACGTGCCGGGGTGAAAAC 61.165 55.000 2.18 0.00 0.00 2.43
825 1129 4.577152 TGGTTTGGCCAGACACAG 57.423 55.556 26.26 0.00 43.61 3.66
826 1130 1.827789 TGGTTTGGCCAGACACAGC 60.828 57.895 26.26 10.63 43.61 4.40
850 1154 0.988145 CAGGTGCCCCCATCTTCCTA 60.988 60.000 0.00 0.00 34.66 2.94
854 1158 0.258774 TGCCCCCATCTTCCTAAAGC 59.741 55.000 0.00 0.00 32.18 3.51
858 1163 2.131023 CCCCATCTTCCTAAAGCCTCT 58.869 52.381 0.00 0.00 32.18 3.69
865 1170 2.859165 TCCTAAAGCCTCTGTTGTGG 57.141 50.000 0.00 0.00 0.00 4.17
872 1177 1.845809 GCCTCTGTTGTGGTTGCTCG 61.846 60.000 0.00 0.00 0.00 5.03
881 1186 1.228124 TGGTTGCTCGGTCCCTTTG 60.228 57.895 0.00 0.00 0.00 2.77
883 1188 1.235281 GGTTGCTCGGTCCCTTTGTC 61.235 60.000 0.00 0.00 0.00 3.18
886 1191 2.434359 CTCGGTCCCTTTGTCGCC 60.434 66.667 0.00 0.00 0.00 5.54
887 1192 2.920912 TCGGTCCCTTTGTCGCCT 60.921 61.111 0.00 0.00 0.00 5.52
889 1194 1.599797 CGGTCCCTTTGTCGCCTTT 60.600 57.895 0.00 0.00 0.00 3.11
890 1195 1.170290 CGGTCCCTTTGTCGCCTTTT 61.170 55.000 0.00 0.00 0.00 2.27
891 1196 0.596577 GGTCCCTTTGTCGCCTTTTC 59.403 55.000 0.00 0.00 0.00 2.29
916 1221 8.498358 TCGATGAAAATCTGATATTTCAATCGG 58.502 33.333 26.69 18.84 45.56 4.18
927 1232 9.110502 CTGATATTTCAATCGGATGATGATGAT 57.889 33.333 0.00 0.00 34.68 2.45
929 1234 8.803397 ATATTTCAATCGGATGATGATGATGT 57.197 30.769 0.00 0.00 34.24 3.06
938 1243 5.575957 GGATGATGATGATGTTGTTGTGTC 58.424 41.667 0.00 0.00 0.00 3.67
949 1254 2.676342 GTTGTTGTGTCGTGTCCTTTCT 59.324 45.455 0.00 0.00 0.00 2.52
950 1255 3.804786 TGTTGTGTCGTGTCCTTTCTA 57.195 42.857 0.00 0.00 0.00 2.10
968 1273 5.796350 TTCTAAAGGCGTCATCTTAAAGC 57.204 39.130 0.00 0.00 0.00 3.51
969 1274 3.863424 TCTAAAGGCGTCATCTTAAAGCG 59.137 43.478 0.00 0.00 0.00 4.68
970 1275 0.727398 AAGGCGTCATCTTAAAGCGC 59.273 50.000 0.00 0.00 46.24 5.92
971 1276 0.108138 AGGCGTCATCTTAAAGCGCT 60.108 50.000 2.64 2.64 46.20 5.92
972 1277 0.727398 GGCGTCATCTTAAAGCGCTT 59.273 50.000 18.98 18.98 46.20 4.68
973 1278 1.529826 GGCGTCATCTTAAAGCGCTTG 60.530 52.381 25.80 11.82 46.20 4.01
974 1279 1.529826 GCGTCATCTTAAAGCGCTTGG 60.530 52.381 25.80 16.65 44.00 3.61
975 1280 1.732259 CGTCATCTTAAAGCGCTTGGT 59.268 47.619 25.80 11.92 0.00 3.67
976 1281 2.159627 CGTCATCTTAAAGCGCTTGGTT 59.840 45.455 25.80 11.09 34.05 3.67
977 1282 3.364964 CGTCATCTTAAAGCGCTTGGTTT 60.365 43.478 25.80 10.67 44.82 3.27
978 1283 4.159120 GTCATCTTAAAGCGCTTGGTTTC 58.841 43.478 25.80 6.26 42.03 2.78
979 1284 2.961522 TCTTAAAGCGCTTGGTTTCG 57.038 45.000 25.80 9.39 42.03 3.46
980 1285 2.215196 TCTTAAAGCGCTTGGTTTCGT 58.785 42.857 25.80 8.59 42.03 3.85
981 1286 2.032377 TCTTAAAGCGCTTGGTTTCGTG 60.032 45.455 25.80 8.40 42.03 4.35
982 1287 0.589223 TAAAGCGCTTGGTTTCGTGG 59.411 50.000 25.80 0.00 42.03 4.94
983 1288 1.098712 AAAGCGCTTGGTTTCGTGGA 61.099 50.000 25.80 0.00 38.92 4.02
984 1289 1.507141 AAGCGCTTGGTTTCGTGGAG 61.507 55.000 24.40 0.00 0.00 3.86
985 1290 2.556287 CGCTTGGTTTCGTGGAGC 59.444 61.111 0.00 0.00 0.00 4.70
986 1291 2.954611 GCTTGGTTTCGTGGAGCC 59.045 61.111 0.00 0.00 0.00 4.70
987 1292 1.600916 GCTTGGTTTCGTGGAGCCT 60.601 57.895 0.00 0.00 0.00 4.58
988 1293 1.578206 GCTTGGTTTCGTGGAGCCTC 61.578 60.000 0.00 0.00 0.00 4.70
1013 1318 6.910536 ACTTCATCTCTTCGCGATATTTTT 57.089 33.333 10.88 0.00 0.00 1.94
1016 1321 8.704234 ACTTCATCTCTTCGCGATATTTTTATC 58.296 33.333 10.88 0.00 0.00 1.75
1018 1323 6.308041 TCATCTCTTCGCGATATTTTTATCGG 59.692 38.462 10.88 7.27 46.64 4.18
1100 1406 6.682746 TGGTTTTCTTAATAATTTGCGCAGA 58.317 32.000 11.31 6.65 0.00 4.26
2981 3534 5.238650 GTGTTCAGGTTTGAGCTAGCTAAAA 59.761 40.000 21.44 21.44 35.75 1.52
3182 3735 7.162082 GGGATTCCAACCACTATATTAGTCAG 58.838 42.308 4.80 0.00 36.76 3.51
3184 3737 7.202102 GGATTCCAACCACTATATTAGTCAGGT 60.202 40.741 0.00 0.00 36.85 4.00
3231 3784 8.944138 TCATGTATGTCCCTCTAAATATTTCCA 58.056 33.333 3.39 0.00 0.00 3.53
3294 3847 1.211457 AGCAGACCCATCATCTCCAAC 59.789 52.381 0.00 0.00 0.00 3.77
3296 3849 1.482182 CAGACCCATCATCTCCAACGA 59.518 52.381 0.00 0.00 0.00 3.85
3311 3864 0.036306 AACGATCACTCCCCAACCAC 59.964 55.000 0.00 0.00 0.00 4.16
3312 3865 1.078426 CGATCACTCCCCAACCACC 60.078 63.158 0.00 0.00 0.00 4.61
3313 3866 1.303282 GATCACTCCCCAACCACCC 59.697 63.158 0.00 0.00 0.00 4.61
3314 3867 2.536997 GATCACTCCCCAACCACCCG 62.537 65.000 0.00 0.00 0.00 5.28
3315 3868 3.566210 CACTCCCCAACCACCCGT 61.566 66.667 0.00 0.00 0.00 5.28
3316 3869 3.246880 ACTCCCCAACCACCCGTC 61.247 66.667 0.00 0.00 0.00 4.79
3317 3870 3.246112 CTCCCCAACCACCCGTCA 61.246 66.667 0.00 0.00 0.00 4.35
3318 3871 2.773053 TCCCCAACCACCCGTCAA 60.773 61.111 0.00 0.00 0.00 3.18
3319 3872 2.196229 CCCCAACCACCCGTCAAA 59.804 61.111 0.00 0.00 0.00 2.69
3320 3873 1.455959 CCCCAACCACCCGTCAAAA 60.456 57.895 0.00 0.00 0.00 2.44
3321 3874 1.737201 CCCAACCACCCGTCAAAAC 59.263 57.895 0.00 0.00 0.00 2.43
3322 3875 0.753848 CCCAACCACCCGTCAAAACT 60.754 55.000 0.00 0.00 0.00 2.66
3323 3876 1.107945 CCAACCACCCGTCAAAACTT 58.892 50.000 0.00 0.00 0.00 2.66
3324 3877 2.299521 CCAACCACCCGTCAAAACTTA 58.700 47.619 0.00 0.00 0.00 2.24
3325 3878 2.688958 CCAACCACCCGTCAAAACTTAA 59.311 45.455 0.00 0.00 0.00 1.85
3326 3879 3.130693 CCAACCACCCGTCAAAACTTAAA 59.869 43.478 0.00 0.00 0.00 1.52
3327 3880 4.106909 CAACCACCCGTCAAAACTTAAAC 58.893 43.478 0.00 0.00 0.00 2.01
3328 3881 2.355444 ACCACCCGTCAAAACTTAAACG 59.645 45.455 0.00 0.00 35.01 3.60
3329 3882 2.377880 CACCCGTCAAAACTTAAACGC 58.622 47.619 0.00 0.00 33.95 4.84
3330 3883 1.334556 ACCCGTCAAAACTTAAACGCC 59.665 47.619 0.00 0.00 33.95 5.68
3331 3884 1.334243 CCCGTCAAAACTTAAACGCCA 59.666 47.619 0.00 0.00 33.95 5.69
3332 3885 2.377880 CCGTCAAAACTTAAACGCCAC 58.622 47.619 0.00 0.00 33.95 5.01
3333 3886 2.377880 CGTCAAAACTTAAACGCCACC 58.622 47.619 0.00 0.00 0.00 4.61
3334 3887 2.734670 GTCAAAACTTAAACGCCACCC 58.265 47.619 0.00 0.00 0.00 4.61
3335 3888 1.334243 TCAAAACTTAAACGCCACCCG 59.666 47.619 0.00 0.00 44.21 5.28
3344 3897 2.344500 CGCCACCCGTTGTTCCTA 59.656 61.111 0.00 0.00 0.00 2.94
3345 3898 1.078708 CGCCACCCGTTGTTCCTAT 60.079 57.895 0.00 0.00 0.00 2.57
3346 3899 0.675522 CGCCACCCGTTGTTCCTATT 60.676 55.000 0.00 0.00 0.00 1.73
3347 3900 1.541379 GCCACCCGTTGTTCCTATTT 58.459 50.000 0.00 0.00 0.00 1.40
3348 3901 1.201414 GCCACCCGTTGTTCCTATTTG 59.799 52.381 0.00 0.00 0.00 2.32
3349 3902 2.510613 CCACCCGTTGTTCCTATTTGT 58.489 47.619 0.00 0.00 0.00 2.83
3350 3903 3.677190 CCACCCGTTGTTCCTATTTGTA 58.323 45.455 0.00 0.00 0.00 2.41
3351 3904 4.073549 CCACCCGTTGTTCCTATTTGTAA 58.926 43.478 0.00 0.00 0.00 2.41
3352 3905 4.519730 CCACCCGTTGTTCCTATTTGTAAA 59.480 41.667 0.00 0.00 0.00 2.01
3353 3906 5.009811 CCACCCGTTGTTCCTATTTGTAAAA 59.990 40.000 0.00 0.00 0.00 1.52
3354 3907 6.146898 CACCCGTTGTTCCTATTTGTAAAAG 58.853 40.000 0.00 0.00 0.00 2.27
3355 3908 5.829391 ACCCGTTGTTCCTATTTGTAAAAGT 59.171 36.000 0.00 0.00 0.00 2.66
3356 3909 6.146898 CCCGTTGTTCCTATTTGTAAAAGTG 58.853 40.000 0.00 0.00 0.00 3.16
3357 3910 6.146898 CCGTTGTTCCTATTTGTAAAAGTGG 58.853 40.000 0.00 0.00 0.00 4.00
3358 3911 6.146898 CGTTGTTCCTATTTGTAAAAGTGGG 58.853 40.000 0.00 0.00 0.00 4.61
3359 3912 6.016943 CGTTGTTCCTATTTGTAAAAGTGGGA 60.017 38.462 0.00 0.00 0.00 4.37
3360 3913 7.468906 CGTTGTTCCTATTTGTAAAAGTGGGAA 60.469 37.037 2.26 2.26 0.00 3.97
3361 3914 7.899648 TGTTCCTATTTGTAAAAGTGGGAAA 57.100 32.000 7.45 0.00 34.12 3.13
3362 3915 8.307582 TGTTCCTATTTGTAAAAGTGGGAAAA 57.692 30.769 7.45 0.34 34.12 2.29
3363 3916 8.759782 TGTTCCTATTTGTAAAAGTGGGAAAAA 58.240 29.630 7.45 0.00 34.12 1.94
3364 3917 9.772973 GTTCCTATTTGTAAAAGTGGGAAAAAT 57.227 29.630 7.45 0.00 34.12 1.82
3395 3948 8.887036 ATTTCAACCTAAAACTTGCCTTAAAG 57.113 30.769 0.00 0.00 0.00 1.85
3396 3949 7.412853 TTCAACCTAAAACTTGCCTTAAAGT 57.587 32.000 0.00 0.00 42.21 2.66
3397 3950 8.522542 TTCAACCTAAAACTTGCCTTAAAGTA 57.477 30.769 0.00 0.00 39.48 2.24
3398 3951 8.522542 TCAACCTAAAACTTGCCTTAAAGTAA 57.477 30.769 0.00 0.00 39.48 2.24
3399 3952 8.968969 TCAACCTAAAACTTGCCTTAAAGTAAA 58.031 29.630 0.00 0.00 39.48 2.01
3400 3953 9.758651 CAACCTAAAACTTGCCTTAAAGTAAAT 57.241 29.630 0.00 0.00 39.48 1.40
3401 3954 9.758651 AACCTAAAACTTGCCTTAAAGTAAATG 57.241 29.630 0.00 0.00 39.48 2.32
3402 3955 7.870954 ACCTAAAACTTGCCTTAAAGTAAATGC 59.129 33.333 0.00 0.00 39.48 3.56
3403 3956 8.088365 CCTAAAACTTGCCTTAAAGTAAATGCT 58.912 33.333 0.00 0.00 39.48 3.79
3404 3957 7.713764 AAAACTTGCCTTAAAGTAAATGCTG 57.286 32.000 0.00 0.00 39.48 4.41
3405 3958 5.391312 ACTTGCCTTAAAGTAAATGCTGG 57.609 39.130 0.00 0.00 38.62 4.85
3406 3959 4.220602 ACTTGCCTTAAAGTAAATGCTGGG 59.779 41.667 0.00 0.00 38.62 4.45
3407 3960 3.773560 TGCCTTAAAGTAAATGCTGGGT 58.226 40.909 0.00 0.00 0.00 4.51
3408 3961 4.156477 TGCCTTAAAGTAAATGCTGGGTT 58.844 39.130 0.00 0.00 0.00 4.11
3409 3962 4.591072 TGCCTTAAAGTAAATGCTGGGTTT 59.409 37.500 0.00 0.00 0.00 3.27
3410 3963 5.168569 GCCTTAAAGTAAATGCTGGGTTTC 58.831 41.667 0.00 0.00 0.00 2.78
3411 3964 5.279256 GCCTTAAAGTAAATGCTGGGTTTCA 60.279 40.000 0.00 0.00 0.00 2.69
3412 3965 6.574269 GCCTTAAAGTAAATGCTGGGTTTCAT 60.574 38.462 0.00 0.00 0.00 2.57
3413 3966 6.813152 CCTTAAAGTAAATGCTGGGTTTCATG 59.187 38.462 0.00 0.00 0.00 3.07
3414 3967 7.309744 CCTTAAAGTAAATGCTGGGTTTCATGA 60.310 37.037 0.00 0.00 0.00 3.07
3415 3968 6.610075 AAAGTAAATGCTGGGTTTCATGAT 57.390 33.333 0.00 0.00 0.00 2.45
3416 3969 6.610075 AAGTAAATGCTGGGTTTCATGATT 57.390 33.333 0.00 0.00 0.00 2.57
3417 3970 5.969423 AGTAAATGCTGGGTTTCATGATTG 58.031 37.500 0.00 0.00 0.00 2.67
3418 3971 4.895668 AAATGCTGGGTTTCATGATTGT 57.104 36.364 0.00 0.00 0.00 2.71
3419 3972 4.895668 AATGCTGGGTTTCATGATTGTT 57.104 36.364 0.00 0.00 0.00 2.83
3420 3973 5.999205 AATGCTGGGTTTCATGATTGTTA 57.001 34.783 0.00 0.00 0.00 2.41
3421 3974 4.782019 TGCTGGGTTTCATGATTGTTAC 57.218 40.909 0.00 0.00 0.00 2.50
3422 3975 3.509575 TGCTGGGTTTCATGATTGTTACC 59.490 43.478 0.00 0.00 0.00 2.85
3423 3976 3.509575 GCTGGGTTTCATGATTGTTACCA 59.490 43.478 0.00 0.00 32.53 3.25
3424 3977 4.160252 GCTGGGTTTCATGATTGTTACCAT 59.840 41.667 0.00 0.00 32.53 3.55
3425 3978 5.337491 GCTGGGTTTCATGATTGTTACCATT 60.337 40.000 0.00 0.00 32.53 3.16
3426 3979 6.035368 TGGGTTTCATGATTGTTACCATTG 57.965 37.500 0.00 0.00 32.53 2.82
3427 3980 5.541868 TGGGTTTCATGATTGTTACCATTGT 59.458 36.000 0.00 0.00 32.53 2.71
3428 3981 6.042552 TGGGTTTCATGATTGTTACCATTGTT 59.957 34.615 0.00 0.00 32.53 2.83
3429 3982 6.589907 GGGTTTCATGATTGTTACCATTGTTC 59.410 38.462 0.00 0.00 32.53 3.18
3430 3983 6.307800 GGTTTCATGATTGTTACCATTGTTCG 59.692 38.462 0.00 0.00 31.77 3.95
3431 3984 5.559427 TCATGATTGTTACCATTGTTCGG 57.441 39.130 0.00 0.00 0.00 4.30
3432 3985 4.397730 TCATGATTGTTACCATTGTTCGGG 59.602 41.667 0.00 0.00 0.00 5.14
3433 3986 4.022413 TGATTGTTACCATTGTTCGGGA 57.978 40.909 0.00 0.00 0.00 5.14
3434 3987 4.399219 TGATTGTTACCATTGTTCGGGAA 58.601 39.130 0.00 0.00 0.00 3.97
3435 3988 5.013547 TGATTGTTACCATTGTTCGGGAAT 58.986 37.500 0.00 0.00 0.00 3.01
3436 3989 5.478679 TGATTGTTACCATTGTTCGGGAATT 59.521 36.000 0.00 0.00 0.00 2.17
3437 3990 5.379732 TTGTTACCATTGTTCGGGAATTC 57.620 39.130 0.00 0.00 0.00 2.17
3438 3991 3.437395 TGTTACCATTGTTCGGGAATTCG 59.563 43.478 0.00 0.00 0.00 3.34
3439 3992 1.459450 ACCATTGTTCGGGAATTCGG 58.541 50.000 0.00 0.00 0.00 4.30
3440 3993 1.271707 ACCATTGTTCGGGAATTCGGT 60.272 47.619 0.00 0.00 0.00 4.69
3441 3994 2.027007 ACCATTGTTCGGGAATTCGGTA 60.027 45.455 0.00 0.00 0.00 4.02
3442 3995 3.011119 CCATTGTTCGGGAATTCGGTAA 58.989 45.455 0.00 0.00 0.00 2.85
3443 3996 3.181504 CCATTGTTCGGGAATTCGGTAAC 60.182 47.826 0.00 4.22 0.00 2.50
3444 3997 3.405823 TTGTTCGGGAATTCGGTAACT 57.594 42.857 13.31 0.00 0.00 2.24
3445 3998 2.690786 TGTTCGGGAATTCGGTAACTG 58.309 47.619 13.31 0.72 0.00 3.16
3446 3999 2.004733 GTTCGGGAATTCGGTAACTGG 58.995 52.381 0.00 0.00 0.00 4.00
3447 4000 1.269012 TCGGGAATTCGGTAACTGGT 58.731 50.000 0.00 0.00 0.00 4.00
3448 4001 2.455557 TCGGGAATTCGGTAACTGGTA 58.544 47.619 0.00 0.00 0.00 3.25
3449 4002 2.830923 TCGGGAATTCGGTAACTGGTAA 59.169 45.455 0.00 0.00 0.00 2.85
3450 4003 2.931969 CGGGAATTCGGTAACTGGTAAC 59.068 50.000 0.00 0.00 0.00 2.50
3451 4004 3.368739 CGGGAATTCGGTAACTGGTAACT 60.369 47.826 0.00 0.00 37.61 2.24
3452 4005 3.937079 GGGAATTCGGTAACTGGTAACTG 59.063 47.826 0.00 0.00 42.06 3.16
3453 4006 3.373130 GGAATTCGGTAACTGGTAACTGC 59.627 47.826 0.00 0.00 39.52 4.40
3454 4007 3.975168 ATTCGGTAACTGGTAACTGCT 57.025 42.857 0.00 0.00 39.52 4.24
3455 4008 3.308438 TTCGGTAACTGGTAACTGCTC 57.692 47.619 0.00 0.00 39.52 4.26
3456 4009 1.200716 TCGGTAACTGGTAACTGCTCG 59.799 52.381 0.00 0.00 39.52 5.03
3457 4010 1.734707 CGGTAACTGGTAACTGCTCGG 60.735 57.143 0.00 0.00 39.52 4.63
3458 4011 1.274447 GGTAACTGGTAACTGCTCGGT 59.726 52.381 0.00 0.00 39.52 4.69
3459 4012 2.603953 GTAACTGGTAACTGCTCGGTC 58.396 52.381 0.00 0.00 39.52 4.79
3460 4013 0.038526 AACTGGTAACTGCTCGGTCG 60.039 55.000 0.00 0.00 39.52 4.79
3461 4014 0.892358 ACTGGTAACTGCTCGGTCGA 60.892 55.000 0.00 0.00 39.52 4.20
3462 4015 0.456312 CTGGTAACTGCTCGGTCGAC 60.456 60.000 7.13 7.13 37.61 4.20
3463 4016 0.892358 TGGTAACTGCTCGGTCGACT 60.892 55.000 16.46 0.00 37.61 4.18
3464 4017 1.089920 GGTAACTGCTCGGTCGACTA 58.910 55.000 16.46 3.17 0.00 2.59
3465 4018 1.202121 GGTAACTGCTCGGTCGACTAC 60.202 57.143 16.46 7.12 0.00 2.73
3466 4019 1.736681 GTAACTGCTCGGTCGACTACT 59.263 52.381 16.46 0.00 0.00 2.57
3467 4020 0.803740 AACTGCTCGGTCGACTACTC 59.196 55.000 16.46 3.66 0.00 2.59
3468 4021 0.321387 ACTGCTCGGTCGACTACTCA 60.321 55.000 16.46 8.05 0.00 3.41
3469 4022 1.018148 CTGCTCGGTCGACTACTCAT 58.982 55.000 16.46 0.00 0.00 2.90
3470 4023 1.402259 CTGCTCGGTCGACTACTCATT 59.598 52.381 16.46 0.00 0.00 2.57
3471 4024 2.612672 CTGCTCGGTCGACTACTCATTA 59.387 50.000 16.46 0.00 0.00 1.90
3472 4025 2.612672 TGCTCGGTCGACTACTCATTAG 59.387 50.000 16.46 3.09 0.00 1.73
3473 4026 2.602694 GCTCGGTCGACTACTCATTAGC 60.603 54.545 16.46 8.93 0.00 3.09
3474 4027 1.596260 TCGGTCGACTACTCATTAGCG 59.404 52.381 16.46 6.36 0.00 4.26
3475 4028 1.596260 CGGTCGACTACTCATTAGCGA 59.404 52.381 16.46 0.00 35.40 4.93
3476 4029 2.223611 CGGTCGACTACTCATTAGCGAT 59.776 50.000 16.46 0.00 38.08 4.58
3477 4030 3.303857 CGGTCGACTACTCATTAGCGATT 60.304 47.826 16.46 0.00 38.08 3.34
3478 4031 4.084171 CGGTCGACTACTCATTAGCGATTA 60.084 45.833 16.46 0.00 38.08 1.75
3479 4032 5.559608 CGGTCGACTACTCATTAGCGATTAA 60.560 44.000 16.46 0.00 38.08 1.40
3480 4033 6.380190 GGTCGACTACTCATTAGCGATTAAT 58.620 40.000 16.46 0.00 38.08 1.40
3481 4034 6.523893 GGTCGACTACTCATTAGCGATTAATC 59.476 42.308 16.46 5.30 38.08 1.75
3501 4054 8.514330 TTAATCGGTTAATCAGCCATTTAACT 57.486 30.769 0.00 0.00 38.04 2.24
3502 4055 9.616156 TTAATCGGTTAATCAGCCATTTAACTA 57.384 29.630 0.00 3.65 38.04 2.24
3503 4056 8.691661 AATCGGTTAATCAGCCATTTAACTAT 57.308 30.769 10.84 5.16 38.04 2.12
3504 4057 9.787435 AATCGGTTAATCAGCCATTTAACTATA 57.213 29.630 10.84 1.72 38.04 1.31
3505 4058 9.959721 ATCGGTTAATCAGCCATTTAACTATAT 57.040 29.630 10.84 0.00 38.04 0.86
3506 4059 9.787435 TCGGTTAATCAGCCATTTAACTATATT 57.213 29.630 10.84 0.00 38.04 1.28
3513 4066 8.263940 TCAGCCATTTAACTATATTAATCGGC 57.736 34.615 0.00 9.80 34.44 5.54
3514 4067 8.100791 TCAGCCATTTAACTATATTAATCGGCT 58.899 33.333 12.77 12.77 39.99 5.52
3515 4068 9.378551 CAGCCATTTAACTATATTAATCGGCTA 57.621 33.333 15.97 0.00 38.63 3.93
3516 4069 9.379791 AGCCATTTAACTATATTAATCGGCTAC 57.620 33.333 15.29 0.00 38.77 3.58
3517 4070 9.158233 GCCATTTAACTATATTAATCGGCTACA 57.842 33.333 0.00 0.00 32.89 2.74
3523 4076 8.988064 AACTATATTAATCGGCTACACATGAG 57.012 34.615 0.00 0.00 0.00 2.90
3524 4077 8.349568 ACTATATTAATCGGCTACACATGAGA 57.650 34.615 0.00 0.00 0.00 3.27
3525 4078 8.803235 ACTATATTAATCGGCTACACATGAGAA 58.197 33.333 0.00 0.00 0.00 2.87
3526 4079 9.809096 CTATATTAATCGGCTACACATGAGAAT 57.191 33.333 0.00 0.00 0.00 2.40
3532 4085 8.484641 AATCGGCTACACATGAGAATATATTG 57.515 34.615 1.78 0.00 0.00 1.90
3533 4086 6.398095 TCGGCTACACATGAGAATATATTGG 58.602 40.000 1.78 0.00 0.00 3.16
3534 4087 5.063944 CGGCTACACATGAGAATATATTGGC 59.936 44.000 1.78 0.00 0.00 4.52
3535 4088 5.939883 GGCTACACATGAGAATATATTGGCA 59.060 40.000 1.78 1.16 0.00 4.92
3536 4089 6.430925 GGCTACACATGAGAATATATTGGCAA 59.569 38.462 0.68 0.68 0.00 4.52
3537 4090 7.301054 GCTACACATGAGAATATATTGGCAAC 58.699 38.462 0.00 0.00 0.00 4.17
3554 4107 6.701145 TGGCAACATGTAACTAGTTTTTCA 57.299 33.333 14.49 11.20 46.17 2.69
3555 4108 6.500041 TGGCAACATGTAACTAGTTTTTCAC 58.500 36.000 14.49 6.37 46.17 3.18
3556 4109 5.623673 GGCAACATGTAACTAGTTTTTCACG 59.376 40.000 14.49 6.56 0.00 4.35
3557 4110 6.196571 GCAACATGTAACTAGTTTTTCACGT 58.803 36.000 14.49 4.29 0.00 4.49
3558 4111 7.346695 GCAACATGTAACTAGTTTTTCACGTA 58.653 34.615 14.49 0.00 0.00 3.57
3559 4112 8.013378 GCAACATGTAACTAGTTTTTCACGTAT 58.987 33.333 14.49 0.00 0.00 3.06
3560 4113 9.872757 CAACATGTAACTAGTTTTTCACGTATT 57.127 29.630 14.49 0.00 0.00 1.89
3561 4114 9.872757 AACATGTAACTAGTTTTTCACGTATTG 57.127 29.630 14.49 8.28 0.00 1.90
3562 4115 9.048446 ACATGTAACTAGTTTTTCACGTATTGT 57.952 29.630 14.49 8.81 0.00 2.71
3565 4118 9.526713 TGTAACTAGTTTTTCACGTATTGTACA 57.473 29.630 14.49 3.79 0.00 2.90
3568 4121 8.821147 ACTAGTTTTTCACGTATTGTACATCA 57.179 30.769 0.00 0.00 0.00 3.07
3569 4122 9.431887 ACTAGTTTTTCACGTATTGTACATCAT 57.568 29.630 0.00 0.00 0.00 2.45
3581 4134 9.920826 CGTATTGTACATCATATAATCCAATGC 57.079 33.333 0.00 0.00 0.00 3.56
3584 4137 9.743581 ATTGTACATCATATAATCCAATGCTCA 57.256 29.630 0.00 0.00 0.00 4.26
3585 4138 8.552083 TGTACATCATATAATCCAATGCTCAC 57.448 34.615 0.00 0.00 0.00 3.51
3586 4139 8.156165 TGTACATCATATAATCCAATGCTCACA 58.844 33.333 0.00 0.00 0.00 3.58
3587 4140 9.170734 GTACATCATATAATCCAATGCTCACAT 57.829 33.333 0.00 0.00 38.49 3.21
3588 4141 8.051901 ACATCATATAATCCAATGCTCACATG 57.948 34.615 0.00 0.00 36.36 3.21
3589 4142 7.668469 ACATCATATAATCCAATGCTCACATGT 59.332 33.333 0.00 0.00 36.36 3.21
3590 4143 9.169592 CATCATATAATCCAATGCTCACATGTA 57.830 33.333 0.00 0.00 36.36 2.29
3591 4144 8.552083 TCATATAATCCAATGCTCACATGTAC 57.448 34.615 0.00 0.00 36.36 2.90
3592 4145 5.929697 ATAATCCAATGCTCACATGTACG 57.070 39.130 0.00 0.00 36.36 3.67
3593 4146 2.760634 TCCAATGCTCACATGTACGT 57.239 45.000 0.00 0.00 36.36 3.57
3594 4147 3.878160 TCCAATGCTCACATGTACGTA 57.122 42.857 0.00 0.00 36.36 3.57
3595 4148 4.400529 TCCAATGCTCACATGTACGTAT 57.599 40.909 0.00 0.00 36.36 3.06
3596 4149 4.765273 TCCAATGCTCACATGTACGTATT 58.235 39.130 0.00 1.02 36.36 1.89
3597 4150 5.908341 TCCAATGCTCACATGTACGTATTA 58.092 37.500 0.00 0.00 36.36 0.98
3598 4151 6.521162 TCCAATGCTCACATGTACGTATTAT 58.479 36.000 0.00 0.00 36.36 1.28
3599 4152 7.662897 TCCAATGCTCACATGTACGTATTATA 58.337 34.615 0.00 0.00 36.36 0.98
3600 4153 7.597369 TCCAATGCTCACATGTACGTATTATAC 59.403 37.037 0.00 0.00 36.36 1.47
3601 4154 7.383843 CCAATGCTCACATGTACGTATTATACA 59.616 37.037 0.00 0.00 36.36 2.29
3602 4155 8.925700 CAATGCTCACATGTACGTATTATACAT 58.074 33.333 0.00 0.00 42.68 2.29
3603 4156 9.489084 AATGCTCACATGTACGTATTATACATT 57.511 29.630 0.00 0.03 40.51 2.71
3604 4157 8.880878 TGCTCACATGTACGTATTATACATTT 57.119 30.769 0.00 0.00 40.51 2.32
3605 4158 9.968870 TGCTCACATGTACGTATTATACATTTA 57.031 29.630 0.00 0.00 40.51 1.40
3630 4183 6.775594 ACTAAAATATGAGAAAACAGCCCC 57.224 37.500 0.00 0.00 0.00 5.80
3631 4184 6.252995 ACTAAAATATGAGAAAACAGCCCCA 58.747 36.000 0.00 0.00 0.00 4.96
3632 4185 5.405935 AAAATATGAGAAAACAGCCCCAC 57.594 39.130 0.00 0.00 0.00 4.61
3633 4186 3.737559 ATATGAGAAAACAGCCCCACA 57.262 42.857 0.00 0.00 0.00 4.17
3634 4187 2.380064 ATGAGAAAACAGCCCCACAA 57.620 45.000 0.00 0.00 0.00 3.33
3635 4188 2.380064 TGAGAAAACAGCCCCACAAT 57.620 45.000 0.00 0.00 0.00 2.71
3636 4189 3.517296 TGAGAAAACAGCCCCACAATA 57.483 42.857 0.00 0.00 0.00 1.90
3637 4190 3.420893 TGAGAAAACAGCCCCACAATAG 58.579 45.455 0.00 0.00 0.00 1.73
3638 4191 2.755103 GAGAAAACAGCCCCACAATAGG 59.245 50.000 0.00 0.00 0.00 2.57
3639 4192 2.110011 AGAAAACAGCCCCACAATAGGT 59.890 45.455 0.00 0.00 0.00 3.08
3640 4193 3.332485 AGAAAACAGCCCCACAATAGGTA 59.668 43.478 0.00 0.00 0.00 3.08
3641 4194 3.366052 AAACAGCCCCACAATAGGTAG 57.634 47.619 0.00 0.00 0.00 3.18
3642 4195 2.263895 ACAGCCCCACAATAGGTAGA 57.736 50.000 0.00 0.00 0.00 2.59
3643 4196 2.557869 ACAGCCCCACAATAGGTAGAA 58.442 47.619 0.00 0.00 0.00 2.10
3644 4197 3.123273 ACAGCCCCACAATAGGTAGAAT 58.877 45.455 0.00 0.00 0.00 2.40
3645 4198 3.527665 ACAGCCCCACAATAGGTAGAATT 59.472 43.478 0.00 0.00 0.00 2.17
3646 4199 3.885297 CAGCCCCACAATAGGTAGAATTG 59.115 47.826 0.00 0.00 39.68 2.32
3647 4200 3.527665 AGCCCCACAATAGGTAGAATTGT 59.472 43.478 0.00 0.00 45.97 2.71
3648 4201 4.017499 AGCCCCACAATAGGTAGAATTGTT 60.017 41.667 0.00 0.00 43.31 2.83
3649 4202 5.192923 AGCCCCACAATAGGTAGAATTGTTA 59.807 40.000 0.00 0.00 43.31 2.41
3650 4203 5.298527 GCCCCACAATAGGTAGAATTGTTAC 59.701 44.000 0.00 0.00 43.31 2.50
3651 4204 6.419791 CCCCACAATAGGTAGAATTGTTACA 58.580 40.000 0.00 0.00 43.31 2.41
3652 4205 7.060421 CCCCACAATAGGTAGAATTGTTACAT 58.940 38.462 0.00 0.00 43.31 2.29
3653 4206 7.013274 CCCCACAATAGGTAGAATTGTTACATG 59.987 40.741 0.00 0.00 43.31 3.21
3654 4207 7.013274 CCCACAATAGGTAGAATTGTTACATGG 59.987 40.741 0.00 0.00 43.31 3.66
3655 4208 7.773224 CCACAATAGGTAGAATTGTTACATGGA 59.227 37.037 0.00 0.00 43.31 3.41
3656 4209 8.612619 CACAATAGGTAGAATTGTTACATGGAC 58.387 37.037 0.00 0.00 43.31 4.02
3657 4210 7.494625 ACAATAGGTAGAATTGTTACATGGACG 59.505 37.037 0.00 0.00 43.31 4.79
3658 4211 4.766375 AGGTAGAATTGTTACATGGACGG 58.234 43.478 0.00 0.00 0.00 4.79
3659 4212 4.224370 AGGTAGAATTGTTACATGGACGGT 59.776 41.667 0.00 0.00 0.00 4.83
3660 4213 4.939439 GGTAGAATTGTTACATGGACGGTT 59.061 41.667 0.00 0.00 0.00 4.44
3661 4214 5.413523 GGTAGAATTGTTACATGGACGGTTT 59.586 40.000 0.00 0.00 0.00 3.27
3662 4215 5.371115 AGAATTGTTACATGGACGGTTTG 57.629 39.130 0.00 0.00 0.00 2.93
3663 4216 4.217550 AGAATTGTTACATGGACGGTTTGG 59.782 41.667 0.00 0.00 0.00 3.28
3664 4217 2.642154 TGTTACATGGACGGTTTGGT 57.358 45.000 0.00 0.00 0.00 3.67
3665 4218 2.496111 TGTTACATGGACGGTTTGGTC 58.504 47.619 0.00 0.00 36.18 4.02
3666 4219 2.158798 TGTTACATGGACGGTTTGGTCA 60.159 45.455 0.00 0.00 38.70 4.02
3667 4220 3.078837 GTTACATGGACGGTTTGGTCAT 58.921 45.455 0.00 0.00 38.70 3.06
3668 4221 1.533625 ACATGGACGGTTTGGTCATG 58.466 50.000 0.00 0.00 38.70 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.202987 GGGTCTGATCTGGCGCAG 60.203 66.667 10.83 4.99 0.00 5.18
32 33 3.785859 GGGGTCTGATCTGGCGCA 61.786 66.667 20.12 0.00 0.00 6.09
33 34 4.899239 CGGGGTCTGATCTGGCGC 62.899 72.222 12.07 12.07 0.00 6.53
34 35 4.899239 GCGGGGTCTGATCTGGCG 62.899 72.222 0.00 0.00 0.00 5.69
35 36 2.819984 TTTGCGGGGTCTGATCTGGC 62.820 60.000 0.00 0.00 0.00 4.85
36 37 0.322456 TTTTGCGGGGTCTGATCTGG 60.322 55.000 0.00 0.00 0.00 3.86
37 38 0.804989 GTTTTGCGGGGTCTGATCTG 59.195 55.000 0.00 0.00 0.00 2.90
38 39 0.322546 GGTTTTGCGGGGTCTGATCT 60.323 55.000 0.00 0.00 0.00 2.75
39 40 1.644786 CGGTTTTGCGGGGTCTGATC 61.645 60.000 0.00 0.00 0.00 2.92
40 41 1.674322 CGGTTTTGCGGGGTCTGAT 60.674 57.895 0.00 0.00 0.00 2.90
41 42 2.281208 CGGTTTTGCGGGGTCTGA 60.281 61.111 0.00 0.00 0.00 3.27
42 43 2.281208 TCGGTTTTGCGGGGTCTG 60.281 61.111 0.00 0.00 0.00 3.51
43 44 2.281276 GTCGGTTTTGCGGGGTCT 60.281 61.111 0.00 0.00 0.00 3.85
44 45 3.359523 GGTCGGTTTTGCGGGGTC 61.360 66.667 0.00 0.00 0.00 4.46
45 46 4.960866 GGGTCGGTTTTGCGGGGT 62.961 66.667 0.00 0.00 0.00 4.95
47 48 3.880162 TACGGGTCGGTTTTGCGGG 62.880 63.158 0.00 0.00 0.00 6.13
48 49 1.505477 TTTACGGGTCGGTTTTGCGG 61.505 55.000 0.00 0.00 0.00 5.69
49 50 0.307146 TTTTACGGGTCGGTTTTGCG 59.693 50.000 0.00 0.00 0.00 4.85
50 51 2.387185 CTTTTTACGGGTCGGTTTTGC 58.613 47.619 0.00 0.00 0.00 3.68
51 52 2.859419 GCCTTTTTACGGGTCGGTTTTG 60.859 50.000 0.00 0.00 0.00 2.44
52 53 1.337703 GCCTTTTTACGGGTCGGTTTT 59.662 47.619 0.00 0.00 0.00 2.43
53 54 0.953727 GCCTTTTTACGGGTCGGTTT 59.046 50.000 0.00 0.00 0.00 3.27
54 55 0.179023 TGCCTTTTTACGGGTCGGTT 60.179 50.000 0.00 0.00 0.00 4.44
55 56 0.886043 GTGCCTTTTTACGGGTCGGT 60.886 55.000 0.00 0.00 0.00 4.69
56 57 0.885596 TGTGCCTTTTTACGGGTCGG 60.886 55.000 0.00 0.00 0.00 4.79
57 58 1.161843 ATGTGCCTTTTTACGGGTCG 58.838 50.000 0.00 0.00 0.00 4.79
58 59 2.094906 GGAATGTGCCTTTTTACGGGTC 60.095 50.000 0.00 0.00 0.00 4.46
59 60 1.890489 GGAATGTGCCTTTTTACGGGT 59.110 47.619 0.00 0.00 0.00 5.28
60 61 1.135517 CGGAATGTGCCTTTTTACGGG 60.136 52.381 0.00 0.00 0.00 5.28
61 62 1.538075 ACGGAATGTGCCTTTTTACGG 59.462 47.619 0.00 0.00 0.00 4.02
62 63 2.580589 CACGGAATGTGCCTTTTTACG 58.419 47.619 0.00 0.00 42.70 3.18
102 103 2.125310 TGCAGACCCCGCATAACG 60.125 61.111 0.00 0.00 43.15 3.18
107 108 4.783621 GCAGATGCAGACCCCGCA 62.784 66.667 0.00 0.00 44.94 5.69
114 115 4.819761 GACGGCCGCAGATGCAGA 62.820 66.667 28.58 0.00 42.21 4.26
150 151 3.091022 GCAGTTCGCGCAAAACCG 61.091 61.111 16.51 9.59 0.00 4.44
151 152 1.587613 TTGCAGTTCGCGCAAAACC 60.588 52.632 16.51 5.74 45.91 3.27
152 153 3.990141 TTGCAGTTCGCGCAAAAC 58.010 50.000 8.75 11.52 45.91 2.43
156 157 1.207339 CTCATTTGCAGTTCGCGCA 59.793 52.632 8.75 0.00 46.97 6.09
157 158 0.385974 AACTCATTTGCAGTTCGCGC 60.386 50.000 0.00 0.00 46.97 6.86
158 159 2.036556 AAACTCATTTGCAGTTCGCG 57.963 45.000 0.00 0.00 46.97 5.87
159 160 3.758521 CAAAACTCATTTGCAGTTCGC 57.241 42.857 0.00 0.00 41.79 4.70
168 169 1.288752 CGGCCCGCAAAACTCATTT 59.711 52.632 0.00 0.00 0.00 2.32
169 170 2.635443 CCGGCCCGCAAAACTCATT 61.635 57.895 0.00 0.00 0.00 2.57
170 171 3.061848 CCGGCCCGCAAAACTCAT 61.062 61.111 0.00 0.00 0.00 2.90
189 190 3.161450 TAGCAGACCCCGCATCCC 61.161 66.667 0.00 0.00 0.00 3.85
190 191 2.093537 CTCTAGCAGACCCCGCATCC 62.094 65.000 0.00 0.00 0.00 3.51
191 192 1.365633 CTCTAGCAGACCCCGCATC 59.634 63.158 0.00 0.00 0.00 3.91
192 193 0.978146 AACTCTAGCAGACCCCGCAT 60.978 55.000 0.00 0.00 0.00 4.73
193 194 1.609501 AACTCTAGCAGACCCCGCA 60.610 57.895 0.00 0.00 0.00 5.69
194 195 1.153549 CAACTCTAGCAGACCCCGC 60.154 63.158 0.00 0.00 0.00 6.13
195 196 1.153549 GCAACTCTAGCAGACCCCG 60.154 63.158 0.00 0.00 0.00 5.73
196 197 0.176910 GAGCAACTCTAGCAGACCCC 59.823 60.000 0.00 0.00 0.00 4.95
197 198 1.190643 AGAGCAACTCTAGCAGACCC 58.809 55.000 0.00 0.00 39.28 4.46
198 199 3.697045 TCTTAGAGCAACTCTAGCAGACC 59.303 47.826 4.64 0.00 42.92 3.85
199 200 4.202010 CCTCTTAGAGCAACTCTAGCAGAC 60.202 50.000 3.26 0.00 42.92 3.51
200 201 3.951037 CCTCTTAGAGCAACTCTAGCAGA 59.049 47.826 3.26 5.46 42.92 4.26
201 202 3.951037 TCCTCTTAGAGCAACTCTAGCAG 59.049 47.826 3.26 5.14 42.92 4.24
202 203 3.951037 CTCCTCTTAGAGCAACTCTAGCA 59.049 47.826 3.26 0.00 42.92 3.49
203 204 4.568152 CTCCTCTTAGAGCAACTCTAGC 57.432 50.000 3.26 0.00 42.92 3.42
213 214 0.524392 CGCGTGTGCTCCTCTTAGAG 60.524 60.000 1.56 1.56 39.65 2.43
214 215 1.506718 CGCGTGTGCTCCTCTTAGA 59.493 57.895 0.00 0.00 39.65 2.10
215 216 1.517257 CCGCGTGTGCTCCTCTTAG 60.517 63.158 4.92 0.00 39.65 2.18
216 217 2.571757 CCGCGTGTGCTCCTCTTA 59.428 61.111 4.92 0.00 39.65 2.10
217 218 4.379243 CCCGCGTGTGCTCCTCTT 62.379 66.667 4.92 0.00 39.65 2.85
250 251 1.672881 CCAAATTGGAGTCGCCTCATC 59.327 52.381 6.04 0.00 40.96 2.92
252 253 0.960364 GCCAAATTGGAGTCGCCTCA 60.960 55.000 17.47 0.00 40.96 3.86
253 254 1.657751 GGCCAAATTGGAGTCGCCTC 61.658 60.000 17.47 0.00 40.96 4.70
262 263 2.028733 GCGTTGCAGGCCAAATTGG 61.029 57.895 7.84 7.84 41.55 3.16
270 271 1.917782 TTGATAACCGCGTTGCAGGC 61.918 55.000 4.92 1.99 0.00 4.85
286 287 4.015406 ACCAGTGCGCCCGATTGA 62.015 61.111 4.18 0.00 0.00 2.57
288 289 4.329545 ACACCAGTGCGCCCGATT 62.330 61.111 4.18 0.00 0.00 3.34
292 293 3.660111 GTTCACACCAGTGCGCCC 61.660 66.667 4.18 0.00 45.49 6.13
466 472 2.902484 GACGCTGCAACTCGTTTTTATG 59.098 45.455 9.23 0.00 39.22 1.90
467 473 2.806244 AGACGCTGCAACTCGTTTTTAT 59.194 40.909 9.23 0.00 39.22 1.40
471 477 1.498865 CCAGACGCTGCAACTCGTTT 61.499 55.000 9.23 2.22 39.22 3.60
472 478 1.956170 CCAGACGCTGCAACTCGTT 60.956 57.895 9.23 0.00 39.22 3.85
482 488 2.741145 AGGTTTAGATCTCCAGACGCT 58.259 47.619 0.00 0.00 0.00 5.07
484 490 5.127491 AGTCTAGGTTTAGATCTCCAGACG 58.873 45.833 0.00 0.00 38.17 4.18
488 494 7.231722 GCATTAGAGTCTAGGTTTAGATCTCCA 59.768 40.741 0.00 0.00 38.17 3.86
494 500 6.463049 GCATGGCATTAGAGTCTAGGTTTAGA 60.463 42.308 0.00 0.00 33.52 2.10
496 502 5.366768 AGCATGGCATTAGAGTCTAGGTTTA 59.633 40.000 0.00 0.00 0.00 2.01
500 506 4.769488 TCTAGCATGGCATTAGAGTCTAGG 59.231 45.833 0.00 0.00 0.00 3.02
582 886 8.856153 TTAGTCTATGTTTATTTCCTTGCACA 57.144 30.769 0.00 0.00 0.00 4.57
612 916 9.668497 AGGAGTATTTGTATTGGTTTAGAAGTC 57.332 33.333 0.00 0.00 0.00 3.01
629 933 7.180408 TCAGCCTAGAAGTGTTAAGGAGTATTT 59.820 37.037 0.00 0.00 0.00 1.40
653 957 1.168407 GCACCTGAGTTGCAAGCTCA 61.168 55.000 22.13 22.13 40.28 4.26
694 998 2.113139 CCACCACACCACCCACTC 59.887 66.667 0.00 0.00 0.00 3.51
705 1009 2.205074 CATTGAGACGATAGCCACCAC 58.795 52.381 0.00 0.00 42.67 4.16
715 1019 2.094906 CCGGTGTAGAACATTGAGACGA 60.095 50.000 0.00 0.00 0.00 4.20
722 1026 1.903860 TGCCTACCGGTGTAGAACATT 59.096 47.619 19.93 0.00 46.18 2.71
724 1028 0.892755 CTGCCTACCGGTGTAGAACA 59.107 55.000 19.93 8.48 46.18 3.18
732 1036 2.450479 GAACACAGCTGCCTACCGGT 62.450 60.000 15.27 13.98 0.00 5.28
738 1042 1.900498 GGCAAGAACACAGCTGCCT 60.900 57.895 15.27 3.02 39.18 4.75
742 1046 0.536006 GGTCAGGCAAGAACACAGCT 60.536 55.000 0.00 0.00 0.00 4.24
744 1048 0.179020 TGGGTCAGGCAAGAACACAG 60.179 55.000 0.00 0.00 0.00 3.66
748 1052 2.224548 ACTTAGTGGGTCAGGCAAGAAC 60.225 50.000 0.00 0.00 0.00 3.01
765 1069 3.243839 ACGTAAACTCCGGCTTTGACTTA 60.244 43.478 0.00 0.00 0.00 2.24
801 1105 2.520458 TGGCCAAACCAGACAGGG 59.480 61.111 0.61 0.00 46.36 4.45
820 1124 2.516930 GCACCTGTGTGGCTGTGT 60.517 61.111 0.00 0.00 42.99 3.72
850 1154 0.746659 GCAACCACAACAGAGGCTTT 59.253 50.000 0.00 0.00 0.00 3.51
854 1158 1.230635 CCGAGCAACCACAACAGAGG 61.231 60.000 0.00 0.00 0.00 3.69
858 1163 1.525077 GGACCGAGCAACCACAACA 60.525 57.895 0.00 0.00 0.00 3.33
865 1170 1.566018 CGACAAAGGGACCGAGCAAC 61.566 60.000 0.00 0.00 0.00 4.17
872 1177 0.596577 GAAAAGGCGACAAAGGGACC 59.403 55.000 0.00 0.00 0.00 4.46
881 1186 4.091424 CAGATTTTCATCGAAAAGGCGAC 58.909 43.478 7.82 0.00 43.33 5.19
883 1188 4.340894 TCAGATTTTCATCGAAAAGGCG 57.659 40.909 7.82 0.00 43.33 5.52
889 1194 9.868389 CGATTGAAATATCAGATTTTCATCGAA 57.132 29.630 23.31 13.11 40.46 3.71
890 1195 8.498358 CCGATTGAAATATCAGATTTTCATCGA 58.502 33.333 25.54 14.90 40.46 3.59
891 1196 8.498358 TCCGATTGAAATATCAGATTTTCATCG 58.502 33.333 22.37 22.37 40.46 3.84
916 1221 5.163824 ACGACACAACAACATCATCATCATC 60.164 40.000 0.00 0.00 0.00 2.92
919 1224 4.083855 ACACGACACAACAACATCATCATC 60.084 41.667 0.00 0.00 0.00 2.92
922 1227 3.363970 GGACACGACACAACAACATCATC 60.364 47.826 0.00 0.00 0.00 2.92
927 1232 2.102070 AAGGACACGACACAACAACA 57.898 45.000 0.00 0.00 0.00 3.33
929 1234 2.980568 AGAAAGGACACGACACAACAA 58.019 42.857 0.00 0.00 0.00 2.83
949 1254 2.350498 GCGCTTTAAGATGACGCCTTTA 59.650 45.455 0.00 0.00 43.58 1.85
950 1255 1.130561 GCGCTTTAAGATGACGCCTTT 59.869 47.619 0.00 0.00 43.58 3.11
957 1262 3.120338 CGAAACCAAGCGCTTTAAGATGA 60.120 43.478 22.51 0.00 0.00 2.92
959 1264 2.812011 ACGAAACCAAGCGCTTTAAGAT 59.188 40.909 22.51 5.88 0.00 2.40
966 1271 1.961277 CTCCACGAAACCAAGCGCT 60.961 57.895 2.64 2.64 0.00 5.92
967 1272 2.556287 CTCCACGAAACCAAGCGC 59.444 61.111 0.00 0.00 0.00 5.92
968 1273 2.556287 GCTCCACGAAACCAAGCG 59.444 61.111 0.00 0.00 0.00 4.68
969 1274 1.578206 GAGGCTCCACGAAACCAAGC 61.578 60.000 2.15 0.00 0.00 4.01
970 1275 0.250295 TGAGGCTCCACGAAACCAAG 60.250 55.000 12.86 0.00 0.00 3.61
971 1276 0.181587 TTGAGGCTCCACGAAACCAA 59.818 50.000 12.86 0.00 0.00 3.67
972 1277 0.534203 GTTGAGGCTCCACGAAACCA 60.534 55.000 12.86 0.00 0.00 3.67
973 1278 0.250338 AGTTGAGGCTCCACGAAACC 60.250 55.000 12.86 0.00 0.00 3.27
974 1279 1.531578 GAAGTTGAGGCTCCACGAAAC 59.468 52.381 12.86 9.20 0.00 2.78
975 1280 1.140052 TGAAGTTGAGGCTCCACGAAA 59.860 47.619 12.86 0.00 0.00 3.46
976 1281 0.756294 TGAAGTTGAGGCTCCACGAA 59.244 50.000 12.86 0.00 0.00 3.85
977 1282 0.976641 ATGAAGTTGAGGCTCCACGA 59.023 50.000 12.86 1.52 0.00 4.35
978 1283 1.066573 AGATGAAGTTGAGGCTCCACG 60.067 52.381 12.86 0.00 0.00 4.94
979 1284 2.235898 AGAGATGAAGTTGAGGCTCCAC 59.764 50.000 12.86 11.64 0.00 4.02
980 1285 2.544721 AGAGATGAAGTTGAGGCTCCA 58.455 47.619 12.86 2.15 0.00 3.86
981 1286 3.530535 GAAGAGATGAAGTTGAGGCTCC 58.469 50.000 12.86 0.00 0.00 4.70
982 1287 3.186119 CGAAGAGATGAAGTTGAGGCTC 58.814 50.000 7.79 7.79 0.00 4.70
983 1288 2.676463 GCGAAGAGATGAAGTTGAGGCT 60.676 50.000 0.00 0.00 0.00 4.58
984 1289 1.663135 GCGAAGAGATGAAGTTGAGGC 59.337 52.381 0.00 0.00 0.00 4.70
985 1290 1.923204 CGCGAAGAGATGAAGTTGAGG 59.077 52.381 0.00 0.00 0.00 3.86
986 1291 2.868662 TCGCGAAGAGATGAAGTTGAG 58.131 47.619 6.20 0.00 0.00 3.02
1028 1334 1.021390 AAGCATCACTACACAGCCGC 61.021 55.000 0.00 0.00 0.00 6.53
1100 1406 1.995626 CAGGAACATCGGGTCCCCT 60.996 63.158 1.00 0.00 34.07 4.79
1169 1475 1.524621 GTAGCTCATGCGGTGCCAT 60.525 57.895 0.00 0.00 45.42 4.40
2981 3534 1.147191 GACCCTTTGTCCTCCCCTTTT 59.853 52.381 0.00 0.00 38.09 2.27
3182 3735 5.895636 TGTGTGAATCATGGAATACAACC 57.104 39.130 0.00 0.00 0.00 3.77
3184 3737 7.885009 ATGATGTGTGAATCATGGAATACAA 57.115 32.000 0.00 0.00 43.95 2.41
3252 3805 2.106566 CTCTGCCACTAGTCAGGTCAT 58.893 52.381 10.73 0.00 0.00 3.06
3294 3847 1.078426 GGTGGTTGGGGAGTGATCG 60.078 63.158 0.00 0.00 0.00 3.69
3296 3849 2.602676 CGGGTGGTTGGGGAGTGAT 61.603 63.158 0.00 0.00 0.00 3.06
3311 3864 1.334243 TGGCGTTTAAGTTTTGACGGG 59.666 47.619 7.25 0.00 36.14 5.28
3312 3865 2.377880 GTGGCGTTTAAGTTTTGACGG 58.622 47.619 7.25 0.00 36.14 4.79
3313 3866 2.377880 GGTGGCGTTTAAGTTTTGACG 58.622 47.619 0.00 0.00 38.45 4.35
3314 3867 2.734670 GGGTGGCGTTTAAGTTTTGAC 58.265 47.619 0.00 0.00 0.00 3.18
3315 3868 1.334243 CGGGTGGCGTTTAAGTTTTGA 59.666 47.619 0.00 0.00 0.00 2.69
3316 3869 1.065851 ACGGGTGGCGTTTAAGTTTTG 59.934 47.619 0.00 0.00 0.00 2.44
3317 3870 1.391577 ACGGGTGGCGTTTAAGTTTT 58.608 45.000 0.00 0.00 0.00 2.43
3318 3871 1.065851 CAACGGGTGGCGTTTAAGTTT 59.934 47.619 0.00 0.00 0.00 2.66
3319 3872 0.664224 CAACGGGTGGCGTTTAAGTT 59.336 50.000 0.00 0.00 0.00 2.66
3320 3873 0.464193 ACAACGGGTGGCGTTTAAGT 60.464 50.000 0.00 0.00 0.00 2.24
3321 3874 0.664224 AACAACGGGTGGCGTTTAAG 59.336 50.000 0.00 0.00 0.00 1.85
3322 3875 0.662085 GAACAACGGGTGGCGTTTAA 59.338 50.000 0.00 0.00 0.00 1.52
3323 3876 1.165284 GGAACAACGGGTGGCGTTTA 61.165 55.000 0.00 0.00 0.00 2.01
3324 3877 2.483197 GGAACAACGGGTGGCGTTT 61.483 57.895 0.00 0.00 0.00 3.60
3325 3878 2.042404 TAGGAACAACGGGTGGCGTT 62.042 55.000 0.00 0.00 0.00 4.84
3326 3879 1.833787 ATAGGAACAACGGGTGGCGT 61.834 55.000 0.00 0.00 0.00 5.68
3327 3880 0.675522 AATAGGAACAACGGGTGGCG 60.676 55.000 0.00 0.00 0.00 5.69
3328 3881 1.201414 CAAATAGGAACAACGGGTGGC 59.799 52.381 0.00 0.00 0.00 5.01
3329 3882 2.510613 ACAAATAGGAACAACGGGTGG 58.489 47.619 0.00 0.00 0.00 4.61
3330 3883 5.692613 TTTACAAATAGGAACAACGGGTG 57.307 39.130 0.00 0.00 0.00 4.61
3331 3884 5.829391 ACTTTTACAAATAGGAACAACGGGT 59.171 36.000 0.00 0.00 0.00 5.28
3332 3885 6.146898 CACTTTTACAAATAGGAACAACGGG 58.853 40.000 0.00 0.00 0.00 5.28
3333 3886 6.146898 CCACTTTTACAAATAGGAACAACGG 58.853 40.000 0.00 0.00 0.00 4.44
3334 3887 6.016943 TCCCACTTTTACAAATAGGAACAACG 60.017 38.462 0.00 0.00 0.00 4.10
3335 3888 7.279750 TCCCACTTTTACAAATAGGAACAAC 57.720 36.000 0.00 0.00 0.00 3.32
3336 3889 7.899648 TTCCCACTTTTACAAATAGGAACAA 57.100 32.000 0.00 0.00 0.00 2.83
3337 3890 7.899648 TTTCCCACTTTTACAAATAGGAACA 57.100 32.000 0.00 0.00 32.10 3.18
3338 3891 9.772973 ATTTTTCCCACTTTTACAAATAGGAAC 57.227 29.630 0.00 0.00 32.10 3.62
3369 3922 9.974980 CTTTAAGGCAAGTTTTAGGTTGAAATA 57.025 29.630 0.00 0.00 0.00 1.40
3370 3923 8.482943 ACTTTAAGGCAAGTTTTAGGTTGAAAT 58.517 29.630 0.00 0.00 32.81 2.17
3371 3924 7.842982 ACTTTAAGGCAAGTTTTAGGTTGAAA 58.157 30.769 0.00 0.00 32.81 2.69
3372 3925 7.412853 ACTTTAAGGCAAGTTTTAGGTTGAA 57.587 32.000 0.00 0.00 32.81 2.69
3373 3926 8.522542 TTACTTTAAGGCAAGTTTTAGGTTGA 57.477 30.769 0.00 0.00 38.07 3.18
3374 3927 9.758651 ATTTACTTTAAGGCAAGTTTTAGGTTG 57.241 29.630 0.00 0.00 38.07 3.77
3375 3928 9.758651 CATTTACTTTAAGGCAAGTTTTAGGTT 57.241 29.630 0.00 0.00 38.07 3.50
3376 3929 7.870954 GCATTTACTTTAAGGCAAGTTTTAGGT 59.129 33.333 0.00 0.00 38.07 3.08
3377 3930 8.088365 AGCATTTACTTTAAGGCAAGTTTTAGG 58.912 33.333 0.00 0.00 38.07 2.69
3378 3931 8.915654 CAGCATTTACTTTAAGGCAAGTTTTAG 58.084 33.333 0.00 0.00 38.07 1.85
3379 3932 7.870445 CCAGCATTTACTTTAAGGCAAGTTTTA 59.130 33.333 0.00 0.00 38.07 1.52
3380 3933 6.705825 CCAGCATTTACTTTAAGGCAAGTTTT 59.294 34.615 0.00 0.00 38.07 2.43
3381 3934 6.223120 CCAGCATTTACTTTAAGGCAAGTTT 58.777 36.000 0.00 0.00 38.07 2.66
3382 3935 5.279456 CCCAGCATTTACTTTAAGGCAAGTT 60.279 40.000 0.00 0.00 38.07 2.66
3383 3936 4.220602 CCCAGCATTTACTTTAAGGCAAGT 59.779 41.667 0.00 0.00 40.28 3.16
3384 3937 4.220602 ACCCAGCATTTACTTTAAGGCAAG 59.779 41.667 0.00 0.00 0.00 4.01
3385 3938 4.156477 ACCCAGCATTTACTTTAAGGCAA 58.844 39.130 0.00 0.00 0.00 4.52
3386 3939 3.773560 ACCCAGCATTTACTTTAAGGCA 58.226 40.909 0.00 0.00 0.00 4.75
3387 3940 4.801330 AACCCAGCATTTACTTTAAGGC 57.199 40.909 0.00 0.00 0.00 4.35
3388 3941 6.339587 TGAAACCCAGCATTTACTTTAAGG 57.660 37.500 0.00 0.00 0.00 2.69
3389 3942 7.601856 TCATGAAACCCAGCATTTACTTTAAG 58.398 34.615 0.00 0.00 0.00 1.85
3390 3943 7.531857 TCATGAAACCCAGCATTTACTTTAA 57.468 32.000 0.00 0.00 0.00 1.52
3391 3944 7.716799 ATCATGAAACCCAGCATTTACTTTA 57.283 32.000 0.00 0.00 0.00 1.85
3392 3945 6.610075 ATCATGAAACCCAGCATTTACTTT 57.390 33.333 0.00 0.00 0.00 2.66
3393 3946 6.014327 ACAATCATGAAACCCAGCATTTACTT 60.014 34.615 0.00 0.00 0.00 2.24
3394 3947 5.481473 ACAATCATGAAACCCAGCATTTACT 59.519 36.000 0.00 0.00 0.00 2.24
3395 3948 5.723295 ACAATCATGAAACCCAGCATTTAC 58.277 37.500 0.00 0.00 0.00 2.01
3396 3949 5.999205 ACAATCATGAAACCCAGCATTTA 57.001 34.783 0.00 0.00 0.00 1.40
3397 3950 4.895668 ACAATCATGAAACCCAGCATTT 57.104 36.364 0.00 0.00 0.00 2.32
3398 3951 4.895668 AACAATCATGAAACCCAGCATT 57.104 36.364 0.00 0.00 0.00 3.56
3399 3952 4.160252 GGTAACAATCATGAAACCCAGCAT 59.840 41.667 0.00 0.00 32.33 3.79
3400 3953 3.509575 GGTAACAATCATGAAACCCAGCA 59.490 43.478 0.00 0.00 32.33 4.41
3401 3954 4.110036 GGTAACAATCATGAAACCCAGC 57.890 45.455 0.00 0.00 32.33 4.85
3417 3970 3.181504 CCGAATTCCCGAACAATGGTAAC 60.182 47.826 0.00 0.00 0.00 2.50
3418 3971 3.011119 CCGAATTCCCGAACAATGGTAA 58.989 45.455 0.00 0.00 0.00 2.85
3419 3972 2.027007 ACCGAATTCCCGAACAATGGTA 60.027 45.455 0.00 0.00 0.00 3.25
3420 3973 1.271707 ACCGAATTCCCGAACAATGGT 60.272 47.619 0.00 0.00 0.00 3.55
3421 3974 1.459450 ACCGAATTCCCGAACAATGG 58.541 50.000 0.00 0.00 0.00 3.16
3422 3975 3.687698 AGTTACCGAATTCCCGAACAATG 59.312 43.478 0.00 0.00 0.00 2.82
3423 3976 3.687698 CAGTTACCGAATTCCCGAACAAT 59.312 43.478 0.00 0.00 0.00 2.71
3424 3977 3.068560 CAGTTACCGAATTCCCGAACAA 58.931 45.455 0.00 0.00 0.00 2.83
3425 3978 2.613474 CCAGTTACCGAATTCCCGAACA 60.613 50.000 0.00 0.00 0.00 3.18
3426 3979 2.004733 CCAGTTACCGAATTCCCGAAC 58.995 52.381 0.00 1.76 0.00 3.95
3427 3980 1.624813 ACCAGTTACCGAATTCCCGAA 59.375 47.619 0.00 0.00 0.00 4.30
3428 3981 1.269012 ACCAGTTACCGAATTCCCGA 58.731 50.000 0.00 0.00 0.00 5.14
3429 3982 2.931969 GTTACCAGTTACCGAATTCCCG 59.068 50.000 0.00 0.00 0.00 5.14
3430 3983 3.937079 CAGTTACCAGTTACCGAATTCCC 59.063 47.826 0.00 0.00 0.00 3.97
3431 3984 3.373130 GCAGTTACCAGTTACCGAATTCC 59.627 47.826 0.00 0.00 0.00 3.01
3432 3985 4.251268 AGCAGTTACCAGTTACCGAATTC 58.749 43.478 0.00 0.00 0.00 2.17
3433 3986 4.251268 GAGCAGTTACCAGTTACCGAATT 58.749 43.478 0.00 0.00 0.00 2.17
3434 3987 3.675228 CGAGCAGTTACCAGTTACCGAAT 60.675 47.826 0.00 0.00 0.00 3.34
3435 3988 2.352030 CGAGCAGTTACCAGTTACCGAA 60.352 50.000 0.00 0.00 0.00 4.30
3436 3989 1.200716 CGAGCAGTTACCAGTTACCGA 59.799 52.381 0.00 0.00 0.00 4.69
3437 3990 1.625616 CGAGCAGTTACCAGTTACCG 58.374 55.000 0.00 0.00 0.00 4.02
3438 3991 1.274447 ACCGAGCAGTTACCAGTTACC 59.726 52.381 0.00 0.00 0.00 2.85
3439 3992 2.603953 GACCGAGCAGTTACCAGTTAC 58.396 52.381 0.00 0.00 0.00 2.50
3440 3993 1.200716 CGACCGAGCAGTTACCAGTTA 59.799 52.381 0.00 0.00 0.00 2.24
3441 3994 0.038526 CGACCGAGCAGTTACCAGTT 60.039 55.000 0.00 0.00 0.00 3.16
3442 3995 0.892358 TCGACCGAGCAGTTACCAGT 60.892 55.000 0.00 0.00 0.00 4.00
3443 3996 0.456312 GTCGACCGAGCAGTTACCAG 60.456 60.000 3.51 0.00 0.00 4.00
3444 3997 0.892358 AGTCGACCGAGCAGTTACCA 60.892 55.000 13.01 0.00 0.00 3.25
3445 3998 1.089920 TAGTCGACCGAGCAGTTACC 58.910 55.000 13.01 0.00 0.00 2.85
3446 3999 1.736681 AGTAGTCGACCGAGCAGTTAC 59.263 52.381 13.01 5.60 0.00 2.50
3447 4000 2.005451 GAGTAGTCGACCGAGCAGTTA 58.995 52.381 13.01 0.00 0.00 2.24
3448 4001 0.803740 GAGTAGTCGACCGAGCAGTT 59.196 55.000 13.01 0.00 0.00 3.16
3449 4002 0.321387 TGAGTAGTCGACCGAGCAGT 60.321 55.000 13.01 0.00 0.00 4.40
3450 4003 1.018148 ATGAGTAGTCGACCGAGCAG 58.982 55.000 13.01 0.00 0.00 4.24
3451 4004 1.460504 AATGAGTAGTCGACCGAGCA 58.539 50.000 13.01 6.59 0.00 4.26
3452 4005 2.602694 GCTAATGAGTAGTCGACCGAGC 60.603 54.545 13.01 5.96 31.78 5.03
3453 4006 2.348685 CGCTAATGAGTAGTCGACCGAG 60.349 54.545 13.01 0.00 33.72 4.63
3454 4007 1.596260 CGCTAATGAGTAGTCGACCGA 59.404 52.381 13.01 0.00 33.72 4.69
3455 4008 1.596260 TCGCTAATGAGTAGTCGACCG 59.404 52.381 13.01 4.53 35.13 4.79
3456 4009 3.900388 ATCGCTAATGAGTAGTCGACC 57.100 47.619 13.01 0.00 39.48 4.79
3457 4010 6.246748 CGATTAATCGCTAATGAGTAGTCGAC 59.753 42.308 23.67 7.70 45.37 4.20
3458 4011 6.304882 CGATTAATCGCTAATGAGTAGTCGA 58.695 40.000 23.67 8.35 45.37 4.20
3459 4012 6.527513 CGATTAATCGCTAATGAGTAGTCG 57.472 41.667 23.67 2.71 43.84 4.18
3475 4028 9.131791 AGTTAAATGGCTGATTAACCGATTAAT 57.868 29.630 0.00 0.00 42.55 1.40
3476 4029 8.514330 AGTTAAATGGCTGATTAACCGATTAA 57.486 30.769 13.11 0.00 40.98 1.40
3477 4030 9.787435 ATAGTTAAATGGCTGATTAACCGATTA 57.213 29.630 13.11 4.45 40.98 1.75
3478 4031 8.691661 ATAGTTAAATGGCTGATTAACCGATT 57.308 30.769 13.11 0.00 40.98 3.34
3479 4032 9.959721 ATATAGTTAAATGGCTGATTAACCGAT 57.040 29.630 13.11 10.70 40.98 4.18
3480 4033 9.787435 AATATAGTTAAATGGCTGATTAACCGA 57.213 29.630 13.11 6.17 40.98 4.69
3487 4040 8.893727 GCCGATTAATATAGTTAAATGGCTGAT 58.106 33.333 14.16 0.00 36.32 2.90
3488 4041 8.100791 AGCCGATTAATATAGTTAAATGGCTGA 58.899 33.333 19.35 0.00 42.13 4.26
3489 4042 8.268850 AGCCGATTAATATAGTTAAATGGCTG 57.731 34.615 19.35 0.00 42.13 4.85
3490 4043 9.379791 GTAGCCGATTAATATAGTTAAATGGCT 57.620 33.333 21.68 21.68 44.01 4.75
3491 4044 9.158233 TGTAGCCGATTAATATAGTTAAATGGC 57.842 33.333 13.83 13.83 37.94 4.40
3498 4051 8.803235 TCTCATGTGTAGCCGATTAATATAGTT 58.197 33.333 0.00 0.00 0.00 2.24
3499 4052 8.349568 TCTCATGTGTAGCCGATTAATATAGT 57.650 34.615 0.00 0.00 0.00 2.12
3500 4053 9.809096 ATTCTCATGTGTAGCCGATTAATATAG 57.191 33.333 0.00 0.00 0.00 1.31
3506 4059 9.586435 CAATATATTCTCATGTGTAGCCGATTA 57.414 33.333 0.00 0.00 0.00 1.75
3507 4060 7.550551 CCAATATATTCTCATGTGTAGCCGATT 59.449 37.037 0.00 0.00 0.00 3.34
3508 4061 7.044181 CCAATATATTCTCATGTGTAGCCGAT 58.956 38.462 0.00 0.00 0.00 4.18
3509 4062 6.398095 CCAATATATTCTCATGTGTAGCCGA 58.602 40.000 0.00 0.00 0.00 5.54
3510 4063 5.063944 GCCAATATATTCTCATGTGTAGCCG 59.936 44.000 0.00 0.00 0.00 5.52
3511 4064 5.939883 TGCCAATATATTCTCATGTGTAGCC 59.060 40.000 0.00 0.00 0.00 3.93
3512 4065 7.041167 TGTTGCCAATATATTCTCATGTGTAGC 60.041 37.037 0.00 0.00 0.00 3.58
3513 4066 8.382030 TGTTGCCAATATATTCTCATGTGTAG 57.618 34.615 0.00 0.00 0.00 2.74
3514 4067 8.785946 CATGTTGCCAATATATTCTCATGTGTA 58.214 33.333 0.00 0.00 0.00 2.90
3515 4068 7.286087 ACATGTTGCCAATATATTCTCATGTGT 59.714 33.333 18.67 11.81 40.71 3.72
3516 4069 7.654568 ACATGTTGCCAATATATTCTCATGTG 58.345 34.615 18.67 11.44 40.71 3.21
3517 4070 7.828508 ACATGTTGCCAATATATTCTCATGT 57.171 32.000 16.20 16.20 38.56 3.21
3518 4071 9.616634 GTTACATGTTGCCAATATATTCTCATG 57.383 33.333 2.30 15.44 36.99 3.07
3519 4072 9.578576 AGTTACATGTTGCCAATATATTCTCAT 57.421 29.630 2.30 0.00 0.00 2.90
3520 4073 8.978874 AGTTACATGTTGCCAATATATTCTCA 57.021 30.769 2.30 0.00 0.00 3.27
3527 4080 9.855021 GAAAAACTAGTTACATGTTGCCAATAT 57.145 29.630 8.92 0.00 0.00 1.28
3528 4081 8.851145 TGAAAAACTAGTTACATGTTGCCAATA 58.149 29.630 8.92 0.00 0.00 1.90
3529 4082 7.651704 GTGAAAAACTAGTTACATGTTGCCAAT 59.348 33.333 8.92 0.00 0.00 3.16
3530 4083 6.975772 GTGAAAAACTAGTTACATGTTGCCAA 59.024 34.615 8.92 0.00 0.00 4.52
3531 4084 6.500041 GTGAAAAACTAGTTACATGTTGCCA 58.500 36.000 8.92 0.00 0.00 4.92
3532 4085 5.623673 CGTGAAAAACTAGTTACATGTTGCC 59.376 40.000 8.92 0.00 0.00 4.52
3533 4086 6.196571 ACGTGAAAAACTAGTTACATGTTGC 58.803 36.000 19.88 8.11 0.00 4.17
3534 4087 9.872757 AATACGTGAAAAACTAGTTACATGTTG 57.127 29.630 25.47 12.25 0.00 3.33
3535 4088 9.872757 CAATACGTGAAAAACTAGTTACATGTT 57.127 29.630 25.47 16.80 0.00 2.71
3536 4089 9.048446 ACAATACGTGAAAAACTAGTTACATGT 57.952 29.630 24.55 24.55 0.00 3.21
3539 4092 9.526713 TGTACAATACGTGAAAAACTAGTTACA 57.473 29.630 8.92 7.20 0.00 2.41
3542 4095 9.263538 TGATGTACAATACGTGAAAAACTAGTT 57.736 29.630 1.12 1.12 0.00 2.24
3543 4096 8.821147 TGATGTACAATACGTGAAAAACTAGT 57.179 30.769 0.00 0.00 0.00 2.57
3555 4108 9.920826 GCATTGGATTATATGATGTACAATACG 57.079 33.333 0.00 0.00 0.00 3.06
3558 4111 9.743581 TGAGCATTGGATTATATGATGTACAAT 57.256 29.630 0.00 0.00 0.00 2.71
3559 4112 9.002600 GTGAGCATTGGATTATATGATGTACAA 57.997 33.333 0.00 0.00 0.00 2.41
3560 4113 8.156165 TGTGAGCATTGGATTATATGATGTACA 58.844 33.333 0.00 0.00 0.00 2.90
3561 4114 8.552083 TGTGAGCATTGGATTATATGATGTAC 57.448 34.615 0.00 0.00 0.00 2.90
3562 4115 9.169592 CATGTGAGCATTGGATTATATGATGTA 57.830 33.333 0.00 0.00 31.99 2.29
3563 4116 7.668469 ACATGTGAGCATTGGATTATATGATGT 59.332 33.333 0.00 0.00 31.99 3.06
3564 4117 8.051901 ACATGTGAGCATTGGATTATATGATG 57.948 34.615 0.00 0.00 31.99 3.07
3565 4118 9.170734 GTACATGTGAGCATTGGATTATATGAT 57.829 33.333 9.11 0.00 31.99 2.45
3566 4119 7.331687 CGTACATGTGAGCATTGGATTATATGA 59.668 37.037 9.11 0.00 31.99 2.15
3567 4120 7.118245 ACGTACATGTGAGCATTGGATTATATG 59.882 37.037 9.11 0.00 31.99 1.78
3568 4121 7.161404 ACGTACATGTGAGCATTGGATTATAT 58.839 34.615 9.11 0.00 31.99 0.86
3569 4122 6.521162 ACGTACATGTGAGCATTGGATTATA 58.479 36.000 9.11 0.00 31.99 0.98
3570 4123 5.368145 ACGTACATGTGAGCATTGGATTAT 58.632 37.500 9.11 0.00 31.99 1.28
3571 4124 4.765273 ACGTACATGTGAGCATTGGATTA 58.235 39.130 9.11 0.00 31.99 1.75
3572 4125 3.609853 ACGTACATGTGAGCATTGGATT 58.390 40.909 9.11 0.00 31.99 3.01
3573 4126 3.266510 ACGTACATGTGAGCATTGGAT 57.733 42.857 9.11 0.00 31.99 3.41
3574 4127 2.760634 ACGTACATGTGAGCATTGGA 57.239 45.000 9.11 0.00 31.99 3.53
3575 4128 6.785488 ATAATACGTACATGTGAGCATTGG 57.215 37.500 9.11 0.00 31.99 3.16
3576 4129 8.293114 TGTATAATACGTACATGTGAGCATTG 57.707 34.615 9.11 0.00 31.99 2.82
3577 4130 9.489084 AATGTATAATACGTACATGTGAGCATT 57.511 29.630 9.11 7.26 40.80 3.56
3578 4131 9.489084 AAATGTATAATACGTACATGTGAGCAT 57.511 29.630 9.11 0.00 40.80 3.79
3579 4132 8.880878 AAATGTATAATACGTACATGTGAGCA 57.119 30.769 9.11 0.00 40.80 4.26
3604 4157 9.569122 GGGGCTGTTTTCTCATATTTTAGTATA 57.431 33.333 0.00 0.00 0.00 1.47
3605 4158 8.058847 TGGGGCTGTTTTCTCATATTTTAGTAT 58.941 33.333 0.00 0.00 0.00 2.12
3606 4159 7.338449 GTGGGGCTGTTTTCTCATATTTTAGTA 59.662 37.037 0.00 0.00 0.00 1.82
3607 4160 6.152831 GTGGGGCTGTTTTCTCATATTTTAGT 59.847 38.462 0.00 0.00 0.00 2.24
3608 4161 6.152661 TGTGGGGCTGTTTTCTCATATTTTAG 59.847 38.462 0.00 0.00 0.00 1.85
3609 4162 6.013379 TGTGGGGCTGTTTTCTCATATTTTA 58.987 36.000 0.00 0.00 0.00 1.52
3610 4163 4.837860 TGTGGGGCTGTTTTCTCATATTTT 59.162 37.500 0.00 0.00 0.00 1.82
3611 4164 4.415596 TGTGGGGCTGTTTTCTCATATTT 58.584 39.130 0.00 0.00 0.00 1.40
3612 4165 4.046286 TGTGGGGCTGTTTTCTCATATT 57.954 40.909 0.00 0.00 0.00 1.28
3613 4166 3.737559 TGTGGGGCTGTTTTCTCATAT 57.262 42.857 0.00 0.00 0.00 1.78
3614 4167 3.517296 TTGTGGGGCTGTTTTCTCATA 57.483 42.857 0.00 0.00 0.00 2.15
3615 4168 2.380064 TTGTGGGGCTGTTTTCTCAT 57.620 45.000 0.00 0.00 0.00 2.90
3616 4169 2.380064 ATTGTGGGGCTGTTTTCTCA 57.620 45.000 0.00 0.00 0.00 3.27
3617 4170 2.755103 CCTATTGTGGGGCTGTTTTCTC 59.245 50.000 0.00 0.00 0.00 2.87
3618 4171 2.110011 ACCTATTGTGGGGCTGTTTTCT 59.890 45.455 0.00 0.00 0.00 2.52
3619 4172 2.525368 ACCTATTGTGGGGCTGTTTTC 58.475 47.619 0.00 0.00 0.00 2.29
3620 4173 2.694616 ACCTATTGTGGGGCTGTTTT 57.305 45.000 0.00 0.00 0.00 2.43
3621 4174 2.916934 TCTACCTATTGTGGGGCTGTTT 59.083 45.455 0.00 0.00 0.00 2.83
3622 4175 2.557869 TCTACCTATTGTGGGGCTGTT 58.442 47.619 0.00 0.00 0.00 3.16
3623 4176 2.263895 TCTACCTATTGTGGGGCTGT 57.736 50.000 0.00 0.00 0.00 4.40
3624 4177 3.864789 ATTCTACCTATTGTGGGGCTG 57.135 47.619 0.00 0.00 0.00 4.85
3625 4178 3.527665 ACAATTCTACCTATTGTGGGGCT 59.472 43.478 0.00 0.00 42.82 5.19
3626 4179 3.898482 ACAATTCTACCTATTGTGGGGC 58.102 45.455 0.00 0.00 42.82 5.80
3627 4180 6.419791 TGTAACAATTCTACCTATTGTGGGG 58.580 40.000 0.00 0.00 43.44 4.96
3628 4181 7.013274 CCATGTAACAATTCTACCTATTGTGGG 59.987 40.741 0.00 0.00 43.44 4.61
3629 4182 7.773224 TCCATGTAACAATTCTACCTATTGTGG 59.227 37.037 0.00 0.00 43.44 4.17
3630 4183 8.612619 GTCCATGTAACAATTCTACCTATTGTG 58.387 37.037 0.00 0.00 43.44 3.33
3631 4184 7.494625 CGTCCATGTAACAATTCTACCTATTGT 59.505 37.037 0.00 0.00 45.49 2.71
3632 4185 7.042051 CCGTCCATGTAACAATTCTACCTATTG 60.042 40.741 0.00 0.00 38.61 1.90
3633 4186 6.990349 CCGTCCATGTAACAATTCTACCTATT 59.010 38.462 0.00 0.00 0.00 1.73
3634 4187 6.099269 ACCGTCCATGTAACAATTCTACCTAT 59.901 38.462 0.00 0.00 0.00 2.57
3635 4188 5.422970 ACCGTCCATGTAACAATTCTACCTA 59.577 40.000 0.00 0.00 0.00 3.08
3636 4189 4.224370 ACCGTCCATGTAACAATTCTACCT 59.776 41.667 0.00 0.00 0.00 3.08
3637 4190 4.510571 ACCGTCCATGTAACAATTCTACC 58.489 43.478 0.00 0.00 0.00 3.18
3638 4191 6.311723 CAAACCGTCCATGTAACAATTCTAC 58.688 40.000 0.00 0.00 0.00 2.59
3639 4192 5.413213 CCAAACCGTCCATGTAACAATTCTA 59.587 40.000 0.00 0.00 0.00 2.10
3640 4193 4.217550 CCAAACCGTCCATGTAACAATTCT 59.782 41.667 0.00 0.00 0.00 2.40
3641 4194 4.022676 ACCAAACCGTCCATGTAACAATTC 60.023 41.667 0.00 0.00 0.00 2.17
3642 4195 3.892588 ACCAAACCGTCCATGTAACAATT 59.107 39.130 0.00 0.00 0.00 2.32
3643 4196 3.492337 ACCAAACCGTCCATGTAACAAT 58.508 40.909 0.00 0.00 0.00 2.71
3644 4197 2.879646 GACCAAACCGTCCATGTAACAA 59.120 45.455 0.00 0.00 0.00 2.83
3645 4198 2.158798 TGACCAAACCGTCCATGTAACA 60.159 45.455 0.00 0.00 31.35 2.41
3646 4199 2.496111 TGACCAAACCGTCCATGTAAC 58.504 47.619 0.00 0.00 31.35 2.50
3647 4200 2.932855 TGACCAAACCGTCCATGTAA 57.067 45.000 0.00 0.00 31.35 2.41
3648 4201 2.705730 CATGACCAAACCGTCCATGTA 58.294 47.619 0.00 0.00 31.35 2.29
3649 4202 1.533625 CATGACCAAACCGTCCATGT 58.466 50.000 0.00 0.00 31.35 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.