>input_sequence_45739
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------------------------TTCGCGATATTTTTATCGG-AGGGCGCCGGCGGCTGTGTAGTGATGCTTTTCTCTC
AACGTGCTAATGTCAGGGTACTGGTTTTCTTAATAATTTGCGCAGAGGGGACCCGATGTTCCTGGAACCATACTGGATGC
GGCACGCGGAGGCCAGCGCCGTGGTGGTCTCCGGATGGCACCGCATGAGCTACAGAGCCACCGACGGTCTCTTCCAGTCC
GTCGAGCTCGAGCGCTGCATCAGGCGGCTGCACAGGGCCGTCGGCAACGCCGTCGCCGACGACAAGCAAATCGTCTTCGC
CACCGGCTCCATGCAGCTGATCAACGCGCTGGTGTACGCCCTGTCCCCAGACAGCAACTCCGGCTCGACGGCCAACGTGG
TCGCCACCACGCCGTACTACCCGGTCAGTGCTGTTATTTTATGTGTGCCTTTTTCTAGATTATTAGCCACGGATCGATCT
AATCTACTCTGTTTGTTGATTTGATACATCATGCAGGCTTACAGAACGCAGATCGTGTTGTTCGACAGCCGGGAGTACAA
ATGGGCCGGGAACACCTCCATGTGGGCGAAAGCGTCGGGGAACTCCACCACCAAGGAGGACGTCATCGAGTTCGTGACGT
CGCCGAACAACCCCGACGCCCTGCTCCACCAGCCCGTCGTCGTCGGCTCGTCGGCGATCCTCGACCACGCCTACTTCTGG
CCGCACTTCACGCACATCCCCGCGCCCTCCGACGCGGACGTCATGCTCTTCACCACCTCCAAGCTCTCCGGCCATGCCAG
CAGTCGATTCGGGTA--------CGCACACGCACCCACGCGGAAAACAATAGACATACTGCACACACATATA--------
----------------ATGTGTTGCACTGCGCAGGTGGGCGCTGATAAGGGACGAGAAGGTGGCCAAGAGGGTCAATGAC
TACATTATGCAGAACACCATGGGCGCGTCCCGCGACACCCAGCTCCGGATGCTTGCCATCTTCAAGACCATACTGGCCAA
CCTGCACGGCAAGGAGGACATCTTCGCCTTCGGGCACGACGTGATGACGGCCAAATGGCGCAAGCTTAGCGCCGTCGTGT
CGCACTCCCGCCGGATCTCGCTGCAGAACATCCCTCCCCAGTACTGCACCTACTTCGACAAGATCAGGGAGCCATCCCCA
GGTGACGCATCG---ACTTGCTGAAACACGTTCAGATTTTGAAACTATG------------GTTGATGTTTGATTCGGTT
GGCATGCAGCTTATGCGTGGGTCAAGTGTGAGAGGGAGGAAGACAGTGACTGCTCCGACGTGCTGCTCAAGGCCAAGATA
ATCACACGGTCCGGCGTCTGGAACGATGCCAGCAGCCGGTACACGAGGATAAGCCTCATCAAGTCCCAGGACGACTTCGA
CCTGCTCCTCGACAGGATCACAGAATTTGTCGATGCCGAGCTCACCGCTGCTGGTTCCAACTCCATGTGATGTCCCGTGT
TAATATACAGAAACGGGTCAAGGAAATGTGAGCATACAGAAGGTATGTATTTGGTTAGGACGGGTACCAAAAGTGCGACG
TCCAGAGGTCAGCTACGTGTTGGTTGTGTCC-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAGACTCCCAGGCTAGGTGATGATCGA
G-GAGCACGCGTTGTGACTGG-----------ACACTGAACATTACTCGAATGATCAGCTATGCGTTGATTGTTCTCACC
GTGTGT------TACTTATTA-----------------------------------------------------------
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>chr3A_1_TraesCS3A01G244700
TGTAAATTTAGATTTTCCGGGTCGGGACGAGCTGCGCCAGATCAGACCCCGCAAAACCGACCCGTAAAAAGGCACATTCC
GTGAATATCTTTTTTACGGGTCCGTTATGCGGGGTCTGCATCTGCGGCCGTCCGCACCGGCCCGCAAAAGCGGTTTTGCG
CGAACTGCAAATGAGTTTTGCGGGCCGGCGGGATGCGGGGTCTGCTAGAGTTGCTCTAAGAGGAGCACACGCGGGCAGAG
AGCAGAGCTGGATGAGGCGACTCCAATTTGGCCTGCAACGCGGTTATCAATCGGGCGCACTGGTGTGAACGTGGTATGTC
ACATCTAAATTGATGTCTACTTTGTTTTTGTTTATTTTTCCTAGTTTTTTTT----GTTGCTACATTATATACTTGTGGA
AACTTAAATATGACATCCTTAAAAAAGATCTATATGTGAATTAGACAAACTGAA-AAAAAATCTAGTGGATCATAAAAAC
GAGTTGCAGCGTCTGGAGATCTAAACCTAGACTCTAATGCCATGCTAGAAAAGCAACTTAACTTTATTAAAAGCTCAAAG
AACATATATACAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TACACATGA
CTTGATGTGCAAGGAAATAAACATAGACTAATAAAGACTTCTAAACCAATACAAATACTCCTTAACACTTCTAGGCTGAG
CTTGCAACTCAGGTGCGGGCGGCTAGTGGCCATGGCCGAGTGGGTGGTGTGGTGGCTATCGTCTCAATGTTCTACACCGG
TAGGCAGCTGTGTTCTTGCCTGACCCACTAAGTCAAAGCCGGAGTTTACGTGCCGGGGTGAAAACCCTGTCTGGTTTGGC
CAGACACAGCCACACAGGTGCCCCCATCTTCCTAAAGC-CTCTGTTGTGGTTGCTCGGTCCCTTTGTCGCCTTTTCGATG
AAAATCTGATATTTCAATCGGATGATGATGATGTTGTTGTGTCGTGTCCTTTCTAAAGGCGTCATCTTAAAGCGCTTGGT
TTCGTGGAGCCTCAACTTCATCTCTTCGCGATATTTTTATCGG-AGGGCGCCGGCGGCTGTGTAGTGATGCTTTTCTCTC
AACGTGCTAATGTCAGGGTACTGGTTTTCTTAATAATTTGCGCAGAGGGGACCCGATGTTCCTGGAACCATACTGGATGC
GGCACGCGGAGGCCAGCGCCGTGGTGGTCTCCGGATGGCACCGCATGAGCTACAGAGCCACCGACGGTCTCTTCCAGTCC
GTCGAGCTCGAGCGCTGCATCAGGCGGCTGCACAGGGCCGTCGGCAACGCCGTCGCCGACGACAAGCAAATCGTCTTCGC
CACCGGCTCCATGCAGCTGATCAACGCGCTGGTGTACGCCCTGTCCCCAGACAGCAACTCCGGCTCGACGGCCAACGTGG
TCGCCACCACGCCGTACTACCCGGTCAGTGCTGTTATTTTATGTGTGCCTTTTTCTAGATTATTAGCCACGGATCGATCT
AATCTACTCTGTTTGTTGATTTGATACATCATGCAGGCTTACAGAACGCAGATCGTGTTGTTCGACAGCCGGGAGTACAA
ATGGGCCGGGAACACCTCCATGTGGGCGAAAGCGTCGGGGAACTCCACCACCAAGGAGGACGTCATCGAGTTCGTGACGT
CGCCGAACAACCCCGACGCCCTGCTCCACCAGCCCGTCGTCGTCGGCTCGTCGGCGATCCTCGACCACGCCTACTTCTGG
CCGCACTTCACGCACATCCCCGCGCCCTCCGACGCGGACGTCATGCTCTTCACCACCTCCAAGCTCTCCGGCCATGCCAG
CAGTCGATTCGGGTA--------CGCACACGCACCCACGCGGAAAACAATAGACATACTGCACACACATATA--------
----------------ATGTGTTGCACTGCGCAGGTGGGCGCTGATAAGGGACGAGAAGGTGGCCAAGAGGGTCAATGAC
TACATTATGCAGAACACCATGGGCGCGTCCCGCGACACCCAGCTCCGGATGCTTGCCATCTTCAAGACCATACTGGCCAA
CCTGCACGGCAAGGAGGACATCTTCGCCTTCGGGCACGACGTGATGACGGCCAAATGGCGCAAGCTTAGCGCCGTCGTGT
CGCACTCCCGCCGGATCTCGCTGCAGAACATCCCTCCCCAGTACTGCACCTACTTCGACAAGATCAGGGAGCCATCCCCA
GGTGACGCATCG---ACTTGCTGAAACACGTTCAGATTTTGAAACTATG------------GTTGATGTTTGATTCGGTT
GGCATGCAGCTTATGCGTGGGTCAAGTGTGAGAGGGAGGAAGACAGTGACTGCTCCGACGTGCTGCTCAAGGCCAAGATA
ATCACACGGTCCGGCGTCTGGAACGATGCCAGCAGCCGGTACACGAGGATAAGCCTCATCAAGTCCCAGGACGACTTCGA
CCTGCTCCTCGACAGGATCACAGAATTTGTCGATGCCGAGCTCACCGCTGCTGGTTCCAACTCCATGTGATGTCCCGTGT
TAATATACAGAAACGGGTCAAGGAAATGTGAGCATACAGAAGGTATGTATTTGGTTAGGACGGGTACCAAAAGTGCGACG
TCCAGAGGTCAGCTACGTGTTGGTTGTGTCC-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAGACTCCCAGGCTAGGTGATGATCGA
G-GAGCACGCGTTGTGACTGG-----------ACACTGAACATTACTCGAATGATCAGCTATGCGTTGATTGTTCTCACC
GTGTGT------TACTTATTAGACAAGAAAAATGTTTCCATGCTGTATTGAGTGGAGGATTAAGGAGCACATGCAAAGCT
CAGAAACTGGTACATTAATGCTAGTTTGTCCGAGTCATAATTTTCTTTTCTTTTTTGTGTGGGAACTCAGGGAGTTTTTA
TTGAATAGTGATGCTCAGATAGTGATGATGAAAAAACCTCTAGTGTTTATGATACCCTGGAAAGAGCTAAGTTATACTTT
CTCCGTCCATAATATAATAGTGTTTTTTTTACACGGGAGTAGCATTCAGTCGGTAAAATCCTCAAAGTTGTGTTCAGGTT
TGAGCTAGCTAAAAAAAGGGGAGGACAAAGGGTCAGTTATGTCAGGAATCTTCTGGAATTGCATGAGTTTGGGGCGTCCT
GAAGCTGGTTGTAATGGGGAGTATCATATACTAGTATCATGCATATGCGAAATTGCTGAGAGCACACGGCGACCACCTTC
ATCGGAATCTGCCCCACTCATTTTGCATCGGGATTCCAACCACTATATTAGTCAGGTTGTATTCCATGATTCACACATCA
TGTATGTCCCTCTAAATATTTCCATATAAATCTCAACAGCTATAATGACCTGACTAGTGGCAGAGAAGCAGACCCATCAT
CTCCAACGATCACTCCCCAACCACCCGTCAAAACTTAAACGCCACCCGTTGTTCCTATTTGTAAAAGTGGGAAAAATATA
TTATTTCAACCTAAAACTTGCCTTAAAGTAAATGCTGGGTTTCATGATTGTTACCATTGTTCGGGAATTCGGTAACTGGT
AACTGCTCGGTCGACTACTCATTAGCGATTAATCGGTTAATCAGCCATTTAACTATATTAATCGGCTACACATGAGAATA
TATTGGCAACATGTAACTAGTTTTTCACGTATTGTACATCATATAATCCAATGCTCACATGTACGTATTATACATTTATA
CTAAAATATGAGAAAACAGCCCCACAATAGGTAGAATTGTTACATGGACGGTTTGGTCATG
>chr3A_215
TCTAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AGGAGCATACGCGGGCAGAG
AGCAGAGCTGAACTAGGCGACTGCAATTTGACCTGCAACGCGGTTACCGATCAGGCGCACTGGTGTGAACGTGGTATGTC
ATATCTAAGTTGACGTCTACTCTATTTTTGTCTATTTTTTCTTATTTTTTTTTCTTGTTGCTACATTGTATACTTGTGGG
AGCTTAAATGTGACAT-CTTTAAAAAAATCTAGATGTGAATTGGACAATTCTTTTAAAAAATCTAGTGGATTGTAAGGAC
GAGTTGCGGTGTCCGGAGACCCAAATCTAGACTCTAATGCCATGCTAGGAAAACAATTTAATTTTATTGAAGGCCCAAGA
GAGACATATATATATATATATATATATGTATGTATGTATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATACTACCTCCGTTTCAGTTTACAAGTCCTACGCGTATATCTAGATTGTCAATTTTATCACCTTAATAT
AAACTATATAACACAAAAATTATACGGTTTAAAAATAGAACATCTGAAGTTTATATTGATATATTTTTTGTAATATATGA
CTTGTGTTAGGTTGGTCAAATTGACGATCTAGGGACACGCGCACGCCCTGTAAACTGGAGAGAGGTAGTATTACACATGA
CTTGAGGTGCAAGAAAATAAACATAAACTAATAAAAACTCCTAAACTAATACTAATACTCCTTAACACTTCTAGGCCGAG
CTCGCAACTCAGGTGCGGGCGGCTAGTGGCCATGGCCAAGTGGGTGGTATGGTGGCTACCGTCTCGACGTTCTACGCCGG
TGGGCTGTTGTATTCTTGCCTGACCCACCAAGTCAAAGGCGGAGTTTGCGTGCCGGGGTGAAAATCCTATCTGGTTTGGC
CAG--------ACACAGGTGCCCCCATCTTCCTGAAGTTCTCCGTTGTGATTGCTCTGTCCCTTTATTGCGCTCCGGATG
AAAATCTGATATTTCAATCGAATAATAATGACGCTGTTGTGTTGTGTCCTTTCCGAAGGCGCCGTCTTAA----------
-------------AACTTCATCTCTTCGCGATATTTTCATAGCAAGGGCGCCGTCGGCTGTGTAGTGATGCTTTTCTCTC
AACGTGCTAATGTCAGGGTACTGGTTTTCTTAATAATTTGCGCAGCGGGGACCCGATGTTCCTGGAGCCACACTGGATGC
GGCACGCGGAGGCCAGCGCCGTGGTGGTCTCCGGGTGGCACCGCATGAGCTACAGAGCCACCGACGGTCTCTTCCAGTCC
GTCGAGCTCGAGCGCTGCATCAGGCGGCTGCACAGGGCCGTCGGCAACGCCGTCGCCGACGACAAGCAAATCGTCTTCGC
CACCGGCTCCATGCAGCTGATCAACGCGCTGGTGTACGCCCTGTCCCCAGACAGCAACTCCGGCTCGACGGCCAACGTGG
TCGCCACCACGCCGTACTACCCGGTCAGTGCTGTTATTTTATGTGTGCCTTTTTCTAGATTATTAGCCACGGATCGATCT
AATCTACTCTGTTTGTTGATTTGATACATCATGCAGGCTTACAGAACGCAGATCGTGTTGTTCGACAGCCGGGAGTACAA
ATGGGCCGGGAACACCTCCATGTGGGCGAAAGCGTCGGGGAACTCCACCACCAAGGAGGACGTCATCGAGTTCGTGACGT
CGCCGAACAACCCCGACGCCCTGCTCCACCAGCCCGTCGTCGTCGGCTCGTCGGCGATCCTCGACCACGCCTACTTCTGG
CCGCACTTCACGCACATCCCCGCGCCCTCCGACGCGGACGTCATGCTCTTCACCACCTCCAAGCTCTCCGGCCATGCCAG
CAGTCGATTCGGGTA--------CGCACACGCACCCACGCGGAAAACAATAGACATACTGCACACACATATA--------
----------------ATGTGTTGCACTGCGCAGGTGGGCGCTGATAAGGGACGAGAAGGTGGCCAAGAGGGTCAATGAC
TACATTATGCAGAACACCATGGGCGCGTCCCGCGACACCCAGCTCCGGATGCTTGCCATCTTCAAGACCATACTGGCCAA
CCTGCACGGCAAGGAGGACATCTTCGCCTTCGGGCACGACGTGATGACGGCCAAATGGCGCAAGCTTAGCGCCGTCGTGT
CGCACTCCCGCCGGATCTCGCTGCAGAACATCCCTCCCCAGTACTGAACCTACTTCGACAAGATCAGGGAGCCATCCCCA
GGTGACGCATCG---ACTTGCTGAAACACGTTCAGATTTTGAAACTATG------------GTTGATGTTTGATTCGGTT
GGCATGCAGCTTATGCGTGGGTCAAGTGTGAGAGGGAGGAAGACAGTGACTGCTCCGACGTGCTGCTCAAGGCCAAGATA
ATCACACGGTCCGGCGTCTGGAACGATGCCAGCAGCCGGTACACGAGGATAAGCCTCATCAAGTCCCAGGACGACTTCGA
CCTGCTCCTCGACAGGATCACAGAATTTGTCGATGCCGAGCTCACCGCTGCTGGTTCCAACTCCATGTGATGTCCCGTGT
TAATATACAGAAACGGGTCAAGGAAATGTGAGCATACAGAAGGTATGTATTTGGTTAGGACGGGTACCAAAAGTGCGACG
TCCAGAGGTCAGCTACGTGTTGGTTGTGTCC-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAGACTCCCAGGCTAGGTGATGATCGA
G-GAGCACGCGTTGTGACTGG-----------ACACTGAACATTACTCGAATGATCAGCTATGCGTTGATTGTTCTCACC
GTGTGT------TACTTATTAGACAAGAAAAATGTTTCCATGCTGTATTGAGTGGAGGATTAAGGAGCACATGCAAAGCT
CAGAAACTGGTACATTAATGCTAGTTTGTCCGAGTCATAATTTTCTTTTCTTTTTTGTGTGGGAACTCAGGGAGTTTTTA
TTGAATAGTGATGCTCAGATAGTGATGATGAAAAAACCTCTAGTGTTTATGATACCCTGGAAAGAGCTAAGTTATACTTT
CTCCGTCCATAATATAATAGTGTTTTTTTTACACGGGAGTAGCATTCAGTCGGTAAAATCCTCAAAGTTGTGTTCAGGTT
TGAGCTAGCTAAA-AAAGGGGAGGACAAAGGGTCAGTTATGTCAGGAATCTTCTGGAATTGCATGAGTTTGGGGCGTCCT
GAAGCTGGTTGTAATGGGGAGTATCATATACTAGTATCATGCATATGCGAAATTGCTGAGAGCACACGGCGACCACCTTC
ATCGGAATCTGCCCCACTCATTTTGCATCGGGATTCCAACCACTATATTAGTCAAGATGTATTTCATGATTCACACATCA
TGTATGCCCCTCTAAATATTTTCGTATAAATCTCAACAGCTATAGTGACCTGACTAGTGGCAGAGAAGCAGACCCATCAT
CTCCAATGGTCACTCCCCAACCA---------------------------------------------------------
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>chr3B_1053
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-----------------------------------------------------------------------------CTC
AACGTGCTAATGTCAGGGTACTGGTTTTCTTAATAATTTGCGCAGCGGGGACCCGATGTTCCTGGAACCATACTGGATGC
AGCACGCGGAGGCCAGCGCCGTGGTGGTCTCGGGGTGGCACCGCATGAGCTACAGAACCACCGACGGTCTCTTCCAGTCC
GTCGAGCTCGAGCGTTGCATCAGGCGGCTGCACGCGGCCGTCGGCAACGCCGTCGCCGACGACAAGCAAATCGTGTTCGC
CACCGGCTCCATGCAGCTGATCAACGCGCTGGTGTACGCCCTGTCACCGGACAGCAACTCCGGCTCCACGGCCAGCGTGG
TCGCCACCACGCCGTACTACCCGGTTAGTGCTGATTTTTTATGTGTGCCTTTTTCTAGCTTATTAGCCAAGGATCGATCT
AATCTGCTCCGTTTGTTGATATAATACATCATGCAGGCTTACAGAACCCAGATCGTGTTGTTCGACAGCCGGGAGTACAG
ATGGGCCGGGAACACCTCCATGTGGGCCAAAGCGTCGGGGAACTCCACCACCAAGGAGGACGTCATCGAGTTCGTGACGT
CGCCGAACAACCCCGACGCCGTGCTCCACCAGCCCGTCGTCGGCGGCTCGTCGGCGATCCTCGACCACGCCTACTTCTGG
CCGCACTTCACGCACATCCCCGCGCCCTCCGACGAGGACGTCATGCTCTTCACCACCTCCAAGCTCTCCGGCCATGCCAG
CAGTCGATTCGGGTA--------CGCACG-CACGCCACGCCAAAATCAATACACACACA------TATAGCTGTGCTGCG
ACCGACGCCGCTCCGCATGCGTTGCGCTGCGCAGGTGGGCGCTGATAAGGGACGAGAAGGTGGCCAAGAGGGTCAATAAC
TACATTTTGCAGAACACCATGGGCACGTCCCGTGACACCCAGCTCCGGATGCTCAGCGTCTTCAAGGCCATACTGGCCAA
CCTGCACGGCAAGGAGGACATCTTCGCCTTTGGGCACGACGTGATGACGGCCAAATGGCGCAAGCTCGGCGCCGTCGTGT
CGCGCTCCCGCAGGATCTCGCTGCAGAACATCCCTCCCCAGTACTGCACCTACTTCGACAAGATCAGGGAGCCATCCCCA
GGTGACGCATCCACCACTC-----AACACGTTCAGATTTTGAAACTACTGCAGCTACGTGAGTTGATGTTTGATTCGGCG
GTAGTGCAGCTTATGCGTGGGTCAAGTGTGAGAGGGAGGAAGACAGTGACTGCTCTGACGTGCTACTCAAGGCCAAGATA
ATCACACGGTCCGGCGTCTGGAACGACGCCAGCAGCCGGTACACGAGGATAAGCCTCATCAAGTCCCAGGACGACTTCGA
CCTGCTCCTCGAGAGGATCACAGAATTTGTCGATGCCGAGCTCACCGCTGCTGGTTCCAACTCCATGTGATGTCCCATGT
TAATATACAGAAACGGGTCAAGAAAATGTCAGTATACAGAAGGTATGTATTTGGTTAGGACGGGTACCAAAAGTACGACG
TCCAGAGATCAGCTACGCGTTGATTGTGTCC-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAC--------GCAAGGTGATGATCAC
ACGAGCACACATTGTGGATGGACTATGAACGAACACTGAACATTACCGGAATGATCAGCTATG--TTGATTGTTCTCAGT
GTGTATTACTAGTACTTATTAGACAAGAGAAATGTTTCCATGCTGTAATGAGTGGAGGATTAAGGAGCGCATGCAAAGCT
CAGAAACCGGTACATTAATGCTAGTTTGTCC-AGTCATCATTTTCTTCTC-TTTTTGTGTGGGAACTCAGGGATTT----
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>chr3D_1053
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-----------------------------------------------------------------------------CTC
AACGTGCTAACGTCAGGGTGGTGTTTTTCTTAATAATTTGCGCAGTGGGGACCCGATGTTCCTGGAGCCGTACTGGATGC
GGCACGCGGAGGCCAGCGCCGTGGTGGTCTCCGGGTGGCACCGCATGAGCTACAGAGCCACCGACGGTCTCTTCCAGTCC
GTCGAGCTCGAGCGCTGCATCAGGCGGCTGCACAGGGCCGTCGGTAACGCCGTCGCCGACGACAAGCAAATCGTCTTCGC
CACCGGCTCCATGCAGCTGATCAACGCGCTGGTGTACGCCCTGTCCCCGGACAGCAACTCCGGCTCCACGGCCAGCGTGG
TCGCCACCACGCCGTACTACCCGGTCAGTGCCGATCTCG-ATGTGTGCCTTTTTCTAGACTATTAGCCACGGATCGATCT
AATCTACTCTGTTTGTTGATTTGATACATCATGCAGGCTTACAGAACACAGATCGTGTTGTTCGACAGCCGGGAGTACAA
ATGGGCCGGGAACACCTCCATGTGGGCCAAAGCGTCGGGGAACTCCACCACCAAGGAGGACGTCATCGAGTTCGTGACGT
CGCCGAACAACCCCGACGCCCTGCTCAACCAGCCCGTCGTCGGCGGCTCGTCGGCGATCCTCGACCACGCCTACTTCTGG
CCGCACTTCACGCATATCCCCGCGCCCTCCGACGCGGACGTCATGCTCTTCACCACCTCCAAGCTCTCCGGCCATGCCAG
CAGTCGATTCGGGTACGTACGCACGCACGCCACGCCACGCCAAAATCAATAGACACACAAATAGATATAGCTGTGCTGCG
ACCGACGCCGCTCTGCATGCGTTGCACTGCGCAGGTGGGCGCTGATAAGGGACGAGAAGGTGGCCAAGCGGGTCAATGAC
TACATGATGCAGAACACCATGGGCGCGTCCCGCGACACCCAGCTCCGGATGCTCAGCATCTTCAAGGCCATACTGGCCAA
CCTGCACGGCAAGGAGGACATCTTCGCCTTCGGGCACGACGTCATGAGAGCCAAATGGCGCAAGCTCAGCGCCGTCGTGT
CGCGCTCCCGCCGGATCTCGCTGCAGAACATCCCTCCGCAGTACTGCACCTACTTCGACAAGATCAGGGAGCCATCCCCA
GGTGACGCATCG---ACTC-----AACACGTTCAGATTTTGAAACTACTGCAGCTACGTGAGTTGATGTTTGATTCGGTG
GGCATGCAGCTTATGCGTGGGTCAAGTGTGAGAGGGAGGAAGACAGTGACTGCTCCGACGTGCTGCTCAAGGCCAAGATA
ATCACACGGTCCGGCGTCTGGAACGACGCCAGCAGCCGGTACACGAGGATAAGCCTCATCAAGTCCCAGGACGACTTCGA
CCTGCTCCTCGAGAGGATCACAGAATTTGTCGATGCCGAGCTCACCGCTGATGGTTCCAACTCCATGTGATGTCCCATGT
TAATATACAGAAACGGGTCAAGAAAATGTCAGTATACAGAAGGTATGTGTTCAGTTGGTAAAGCCTCTAGTGTTTATGAT
ACCTTGGAAAGATCTAAGTTATTGCATTAATGTCAGATCTTTCCAAGGTATCATAAACCAAAATCATCACTATTCAATAT
TCCCTCCGTTCGAAATTACTTGTCTCGAAAATGGATGTATTTAGAACTAAAATATGTCTAGATACATCCATTTCTGTGAC
AAGTAATTTCAAGCGGAGGGAGTACTTTCCAAGTTATTGCATTGATTGGACTACAC--------GCAAGGTGATGATCAC
ACGACCACACGTTGTGGATGGACTATGAACGAACACTGAACATTACCGGAATGATCAGCTATGCGTTGATTGTTCTCTGT
GTGTATTACTAGTACTTATTAGACAAGAAAAATGTTTCCATGCTGTATTGAGTGGAGGATTAAGGAGCGCATGCAAAGCT
CAGAAACTGGTACATTAATGCTAGTTTGTCCGAGTCATCATTTTCTTTTCTTTTTTGTGTGGGAACTCAGGGAGTTTTTA
TTGAACAGTGATG-------------------------------------------------------------------
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>SNPs
-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S------------
----------S-SS--------S-------S---------------S-S---S---------------------------
-S------S----S-------S-S-------S-------S--SS-----------------------S-----------S
-S-------S------S---S-----S-----S---------S-----SSSSSS-----------------SS---SS--
-------S-S---S-----S-S---S----------------------S---S---S----S------S--S--S---SS
S-S-S-----S---------------------------------------------------------------------
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-----S-------S-----------S---------S---S------S-----S-----------------------S---
--S----------------------------------S----------S---------S------S-S-------S----
-S---S-S---S----------------S---------S--------S----------------S---S-----------
---SSSSSSSS----------------------S---S----S------S------S--------S-S--SS-SSS----
--------------------S--S--S----S-S--------S----------SS------S-S------SSSSSSSSSS
SSSSSSSSSSSSS------------------------S--S-S----------S--------------------------
---------------------------------------------S----------------------------------
----------------------------------S---------------------------------------------
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-------------S------------------------------------------------------------------
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------------------------------------------------------S-S------S----------------
------S--------------S-S--------------------S-----------------------------------
------S-S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1276
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--------------------------------------------------------AGGCGTCATCTTAAAGCGCT----
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>reverse_3534
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-------------AAAAGGGGAGGACAAAGGGTC----------------------------------------------
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