Multiple sequence alignment - TraesCS3A01G232600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G232600 chr3A 100.000 4497 0 0 1 4497 434131873 434127377 0.000000e+00 8305.0
1 TraesCS3A01G232600 chr3A 94.118 51 3 0 4040 4090 434127473 434127423 1.340000e-10 78.7
2 TraesCS3A01G232600 chr3A 94.118 51 3 0 4401 4451 434127834 434127784 1.340000e-10 78.7
3 TraesCS3A01G232600 chr3D 91.222 2757 89 33 28 2707 301220854 301223534 0.000000e+00 3609.0
4 TraesCS3A01G232600 chr3D 91.729 943 48 14 2725 3662 301223520 301224437 0.000000e+00 1282.0
5 TraesCS3A01G232600 chr3D 91.237 194 15 2 3700 3893 301224514 301224705 3.450000e-66 263.0
6 TraesCS3A01G232600 chr3B 91.573 1151 51 14 818 1935 420038930 420037793 0.000000e+00 1546.0
7 TraesCS3A01G232600 chr3B 88.964 1042 51 25 1976 2984 420037729 420036719 0.000000e+00 1229.0
8 TraesCS3A01G232600 chr3B 93.342 796 35 9 3 794 420039783 420039002 0.000000e+00 1160.0
9 TraesCS3A01G232600 chr3B 86.826 668 52 18 3020 3662 420036717 420036061 0.000000e+00 713.0
10 TraesCS3A01G232600 chr3B 88.718 195 20 2 3700 3893 420035969 420035776 2.090000e-58 237.0
11 TraesCS3A01G232600 chr4B 87.603 121 14 1 4252 4372 460792294 460792175 6.070000e-29 139.0
12 TraesCS3A01G232600 chr7D 80.500 200 20 7 4191 4372 141487490 141487688 7.850000e-28 135.0
13 TraesCS3A01G232600 chr6B 88.889 45 5 0 4326 4370 3629149 3629105 6.280000e-04 56.5
14 TraesCS3A01G232600 chr5D 90.000 40 4 0 4331 4370 564273020 564272981 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G232600 chr3A 434127377 434131873 4496 True 8305 8305 100.0000 1 4497 1 chr3A.!!$R1 4496
1 TraesCS3A01G232600 chr3D 301220854 301224705 3851 False 1718 3609 91.3960 28 3893 3 chr3D.!!$F1 3865
2 TraesCS3A01G232600 chr3B 420035776 420039783 4007 True 977 1546 89.8846 3 3893 5 chr3B.!!$R1 3890

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
208 214 0.108804 ACTTACACCATCGACTGCCG 60.109 55.0 0.0 0.0 40.25 5.69 F
1820 1897 0.318762 CCTTCGGTGCCTAGCCTATC 59.681 60.0 0.0 0.0 0.00 2.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1910 2010 1.001815 CGGGCGGGCATAAATAGTTTG 60.002 52.381 3.27 0.0 0.0 2.93 R
3667 3869 0.036875 TTCCCACACACACACACACA 59.963 50.000 0.00 0.0 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 80 2.092753 CAGCGGGGGCTTCATATCATAT 60.093 50.000 0.00 0.00 0.00 1.78
75 81 2.171448 AGCGGGGGCTTCATATCATATC 59.829 50.000 0.00 0.00 0.00 1.63
76 82 2.826428 CGGGGGCTTCATATCATATCG 58.174 52.381 0.00 0.00 0.00 2.92
77 83 2.168521 CGGGGGCTTCATATCATATCGT 59.831 50.000 0.00 0.00 0.00 3.73
78 84 3.383505 CGGGGGCTTCATATCATATCGTA 59.616 47.826 0.00 0.00 0.00 3.43
123 129 3.623060 ACTTGTGACAACTGTAGCTTGTG 59.377 43.478 0.00 0.00 31.83 3.33
186 192 0.243095 GACTCGTACCACCAGTCCAC 59.757 60.000 0.00 0.00 31.93 4.02
208 214 0.108804 ACTTACACCATCGACTGCCG 60.109 55.000 0.00 0.00 40.25 5.69
223 229 2.964978 CCGCTTTGCCTCTTTGGG 59.035 61.111 0.00 0.00 36.00 4.12
235 241 2.025887 CCTCTTTGGGCATTGGACTACT 60.026 50.000 0.00 0.00 0.00 2.57
236 242 3.012518 CTCTTTGGGCATTGGACTACTG 58.987 50.000 0.00 0.00 0.00 2.74
248 254 6.516718 CATTGGACTACTGATTAATCCTCGT 58.483 40.000 12.90 9.55 0.00 4.18
297 306 2.370281 AGTGCTACATCCTTCACGTG 57.630 50.000 9.94 9.94 34.84 4.49
452 461 0.390472 CCCTCTCGCTGTCCAAACTC 60.390 60.000 0.00 0.00 0.00 3.01
483 492 5.179555 GCATCCACCGAAAAATAGATACTCC 59.820 44.000 0.00 0.00 0.00 3.85
621 631 1.610624 GCTGTTGGGTTCCGATCAGAA 60.611 52.381 13.45 0.00 0.00 3.02
650 660 5.581085 GTGGTCTTGCGTTATTAACAGAGAT 59.419 40.000 7.31 0.00 0.00 2.75
794 836 6.176183 TCAAGTTCCATTTTTCCTTTTTGCA 58.824 32.000 0.00 0.00 0.00 4.08
807 849 2.147436 TTTTGCATTCGGGTTCAAGC 57.853 45.000 0.00 0.00 0.00 4.01
808 850 1.035923 TTTGCATTCGGGTTCAAGCA 58.964 45.000 0.00 0.00 0.00 3.91
872 934 1.220477 GAGTCTCCAAGCTCCTGCC 59.780 63.158 0.00 0.00 40.80 4.85
918 988 5.445964 CCTATAAAACCCCTTGCACAGTAT 58.554 41.667 0.00 0.00 0.00 2.12
919 989 6.409925 CCCTATAAAACCCCTTGCACAGTATA 60.410 42.308 0.00 0.00 0.00 1.47
1149 1220 3.760035 TCCGACTCGCTGGCCTTC 61.760 66.667 3.32 0.00 0.00 3.46
1410 1481 1.520342 GCTGATGACGAGGTGGCTC 60.520 63.158 0.00 0.00 0.00 4.70
1593 1664 2.568090 CTGGATTTGTGCCGGCAC 59.432 61.111 45.20 45.20 46.33 5.01
1634 1705 2.282701 GTGCGGAACACGGTAATAGA 57.717 50.000 0.00 0.00 44.51 1.98
1635 1706 2.817901 GTGCGGAACACGGTAATAGAT 58.182 47.619 0.00 0.00 44.51 1.98
1636 1707 3.968649 GTGCGGAACACGGTAATAGATA 58.031 45.455 0.00 0.00 44.51 1.98
1637 1708 3.732721 GTGCGGAACACGGTAATAGATAC 59.267 47.826 0.00 0.00 44.51 2.24
1638 1709 3.633525 TGCGGAACACGGTAATAGATACT 59.366 43.478 0.00 0.00 44.51 2.12
1639 1710 4.821260 TGCGGAACACGGTAATAGATACTA 59.179 41.667 0.00 0.00 44.51 1.82
1640 1711 5.149977 GCGGAACACGGTAATAGATACTAC 58.850 45.833 0.00 0.00 44.51 2.73
1641 1712 5.049129 GCGGAACACGGTAATAGATACTACT 60.049 44.000 0.00 0.00 44.51 2.57
1642 1713 6.147821 GCGGAACACGGTAATAGATACTACTA 59.852 42.308 0.00 0.00 44.51 1.82
1643 1714 7.513968 CGGAACACGGTAATAGATACTACTAC 58.486 42.308 0.00 0.00 39.42 2.73
1644 1715 7.171508 CGGAACACGGTAATAGATACTACTACA 59.828 40.741 0.00 0.00 39.42 2.74
1645 1716 8.840321 GGAACACGGTAATAGATACTACTACAA 58.160 37.037 0.00 0.00 34.74 2.41
1728 1804 3.784338 TCTTCTTGCTGCCTTTTGTTTG 58.216 40.909 0.00 0.00 0.00 2.93
1755 1831 6.164408 TCTGTTGTAGTTCGTGCAATTATG 57.836 37.500 0.00 0.00 32.88 1.90
1791 1868 4.542697 TCTTTGGTGCCCTTAACTTCTTT 58.457 39.130 0.00 0.00 0.00 2.52
1820 1897 0.318762 CCTTCGGTGCCTAGCCTATC 59.681 60.000 0.00 0.00 0.00 2.08
1867 1967 1.117150 ATGTTCCAATCTGCATGGGC 58.883 50.000 5.01 0.23 38.54 5.36
1908 2008 2.698274 GTTTCCCTTCCCTTTTGCTTCA 59.302 45.455 0.00 0.00 0.00 3.02
1909 2009 2.765689 TCCCTTCCCTTTTGCTTCAA 57.234 45.000 0.00 0.00 0.00 2.69
1910 2010 2.316108 TCCCTTCCCTTTTGCTTCAAC 58.684 47.619 0.00 0.00 0.00 3.18
1911 2011 2.038659 CCCTTCCCTTTTGCTTCAACA 58.961 47.619 0.00 0.00 0.00 3.33
1952 2078 5.562623 CCGTTTCATTCACGCTAAAACTAAC 59.437 40.000 0.00 0.00 36.27 2.34
1956 2082 5.685841 TCATTCACGCTAAAACTAACAAGC 58.314 37.500 0.00 0.00 0.00 4.01
1958 2084 4.725556 TCACGCTAAAACTAACAAGCAG 57.274 40.909 0.00 0.00 34.60 4.24
2064 2190 3.210012 AAATGGCTGCCGGTCCAGT 62.210 57.895 14.98 11.28 35.57 4.00
2241 2385 4.929211 CAGGCAAAATTAAGGTTGGTTAGC 59.071 41.667 3.78 0.00 0.00 3.09
2267 2412 4.336433 CACCAACGATAATTGAGATTGGCT 59.664 41.667 11.27 0.00 40.23 4.75
2276 2421 7.641411 CGATAATTGAGATTGGCTTAAACTGTG 59.359 37.037 0.00 0.00 0.00 3.66
2282 2427 4.280929 AGATTGGCTTAAACTGTGGAAACC 59.719 41.667 0.00 0.00 0.00 3.27
2288 2433 4.394729 CTTAAACTGTGGAAACCTGCCTA 58.605 43.478 0.00 0.00 0.00 3.93
2326 2473 3.329300 GGCATACCATACCAGCCAG 57.671 57.895 0.00 0.00 44.59 4.85
2334 2482 1.307343 ATACCAGCCAGAGCCAGGT 60.307 57.895 5.32 5.32 46.40 4.00
2357 2505 5.410746 GTCTTGAATGAAAGCTCACTCATCA 59.589 40.000 6.42 4.78 37.63 3.07
2358 2506 6.093771 GTCTTGAATGAAAGCTCACTCATCAT 59.906 38.462 6.42 0.00 37.63 2.45
2359 2507 5.813080 TGAATGAAAGCTCACTCATCATG 57.187 39.130 6.42 0.00 33.02 3.07
2383 2531 2.676463 GCTCCATTTCTTCTCTGTCGCT 60.676 50.000 0.00 0.00 0.00 4.93
2407 2573 1.302431 ACAGCACATGCACGCCTTA 60.302 52.632 6.64 0.00 45.16 2.69
2431 2597 3.246226 CGTTTCTCTGCCGATTTCCTATG 59.754 47.826 0.00 0.00 0.00 2.23
2432 2598 3.475566 TTCTCTGCCGATTTCCTATGG 57.524 47.619 0.00 0.00 0.00 2.74
2460 2626 1.022982 ATGTGTGCGCTGATGAGGTG 61.023 55.000 9.73 0.00 0.00 4.00
2470 2636 3.739810 CGCTGATGAGGTGATGTGATAAG 59.260 47.826 0.00 0.00 0.00 1.73
2607 2773 3.195661 CGTCCTGGCTCAAGGTAAATAC 58.804 50.000 0.00 0.00 38.58 1.89
2608 2774 3.118738 CGTCCTGGCTCAAGGTAAATACT 60.119 47.826 0.00 0.00 38.58 2.12
2609 2775 4.623171 CGTCCTGGCTCAAGGTAAATACTT 60.623 45.833 0.00 0.00 38.58 2.24
2611 2777 6.592870 GTCCTGGCTCAAGGTAAATACTTAT 58.407 40.000 0.00 0.00 38.58 1.73
2614 2780 8.774183 TCCTGGCTCAAGGTAAATACTTATAAA 58.226 33.333 0.00 0.00 38.58 1.40
2617 2783 9.742144 TGGCTCAAGGTAAATACTTATAAAACA 57.258 29.630 0.00 0.00 0.00 2.83
2660 2837 2.159448 TGTTCGTTTTTGGTCTGCACAG 60.159 45.455 0.00 0.00 0.00 3.66
2661 2838 1.021202 TCGTTTTTGGTCTGCACAGG 58.979 50.000 0.00 0.00 0.00 4.00
2662 2839 0.594796 CGTTTTTGGTCTGCACAGGC 60.595 55.000 0.00 0.00 41.68 4.85
2682 2859 3.365364 GGCACAGCTTAGCAAAACAGTAG 60.365 47.826 7.07 0.00 0.00 2.57
2693 2870 1.308998 AAACAGTAGTGGCACAGTGC 58.691 50.000 21.41 17.97 44.58 4.40
2770 2947 2.120274 CCTGTTGGGTTGGGCCAT 59.880 61.111 7.26 0.00 39.65 4.40
2793 2970 1.740285 CCTTCTCGTGTATCGGGGG 59.260 63.158 0.00 0.00 40.91 5.40
2794 2971 1.067582 CTTCTCGTGTATCGGGGGC 59.932 63.158 0.00 0.00 40.91 5.80
2849 3026 1.032114 CCATGCGTTCCTTTCTCCCC 61.032 60.000 0.00 0.00 0.00 4.81
2902 3079 2.122413 AGTGACTCACCCTGGGCA 60.122 61.111 14.08 0.00 34.49 5.36
2949 3126 0.179124 GTGGATGCTGGACTCGAGAC 60.179 60.000 21.68 13.64 0.00 3.36
2993 3170 2.504519 GCCCGGTCACTCCATACC 59.495 66.667 0.00 0.00 35.57 2.73
3050 3227 4.652421 TGGTCTATTTCGGGTGCTAGTATT 59.348 41.667 0.00 0.00 0.00 1.89
3051 3228 5.834742 TGGTCTATTTCGGGTGCTAGTATTA 59.165 40.000 0.00 0.00 0.00 0.98
3052 3229 6.495872 TGGTCTATTTCGGGTGCTAGTATTAT 59.504 38.462 0.00 0.00 0.00 1.28
3073 3250 1.737793 CAGTATGGGACGACAAAAGGC 59.262 52.381 0.00 0.00 0.00 4.35
3122 3305 3.120165 GCAAGAAAGGTAGTGCTACTTGC 60.120 47.826 0.00 0.00 46.74 4.01
3170 3355 9.811995 GATTTTACCCCATTATAAAAGTTCACC 57.188 33.333 0.00 0.00 34.62 4.02
3194 3388 1.321474 CAAGCCCGCCATACATTGAT 58.679 50.000 0.00 0.00 0.00 2.57
3212 3406 2.438021 TGATCCCCTGTAACTGTATGCC 59.562 50.000 0.00 0.00 0.00 4.40
3236 3431 6.597280 CCCTCCTTTTCTTTGTCTATTCTGAG 59.403 42.308 0.00 0.00 0.00 3.35
3263 3458 3.070018 CCATGGCTCATCGTTCCTAATC 58.930 50.000 0.00 0.00 0.00 1.75
3319 3514 2.221299 GCCCAAAACCCCTTTCCCC 61.221 63.158 0.00 0.00 0.00 4.81
3503 3704 5.006552 GCTGATAGCTCTGTTTGATTCTCAC 59.993 44.000 0.00 0.00 38.45 3.51
3546 3747 7.611213 AGTAGGAGTTTTGTGCATATAACAC 57.389 36.000 16.60 11.25 38.55 3.32
3548 3749 5.321102 AGGAGTTTTGTGCATATAACACCA 58.679 37.500 25.06 1.36 37.22 4.17
3549 3750 5.772672 AGGAGTTTTGTGCATATAACACCAA 59.227 36.000 25.06 6.94 37.22 3.67
3550 3751 6.071952 AGGAGTTTTGTGCATATAACACCAAG 60.072 38.462 25.06 0.00 37.22 3.61
3566 3767 1.375268 AAGCTCGTCTCTTGCCTGC 60.375 57.895 0.00 0.00 0.00 4.85
3578 3779 4.030452 GCCTGCCGCAAGACACAC 62.030 66.667 0.00 0.00 43.02 3.82
3589 3790 3.568538 GCAAGACACACCATTTGCTAAG 58.431 45.455 1.16 0.00 41.89 2.18
3595 3796 4.932146 ACACACCATTTGCTAAGTGTTTC 58.068 39.130 3.75 0.00 41.35 2.78
3596 3797 4.202111 ACACACCATTTGCTAAGTGTTTCC 60.202 41.667 3.75 0.00 41.35 3.13
3599 3801 3.886505 ACCATTTGCTAAGTGTTTCCGAA 59.113 39.130 0.00 0.00 0.00 4.30
3604 3806 4.265904 TGCTAAGTGTTTCCGAAGATGA 57.734 40.909 0.00 0.00 0.00 2.92
3662 3864 0.962356 ATAGCACGCAAGCCAGCTTT 60.962 50.000 1.19 1.83 42.17 3.51
3664 3866 1.592400 GCACGCAAGCCAGCTTTTT 60.592 52.632 1.19 0.00 45.62 1.94
3682 3884 2.695613 TTTGTGTGTGTGTGTGTGTG 57.304 45.000 0.00 0.00 0.00 3.82
3683 3885 0.877743 TTGTGTGTGTGTGTGTGTGG 59.122 50.000 0.00 0.00 0.00 4.17
3687 3889 0.732571 GTGTGTGTGTGTGTGGGAAG 59.267 55.000 0.00 0.00 0.00 3.46
3688 3890 1.029408 TGTGTGTGTGTGTGGGAAGC 61.029 55.000 0.00 0.00 0.00 3.86
3689 3891 0.748005 GTGTGTGTGTGTGGGAAGCT 60.748 55.000 0.00 0.00 0.00 3.74
3691 3893 0.179045 GTGTGTGTGTGGGAAGCTCT 60.179 55.000 0.00 0.00 0.00 4.09
3693 3895 1.070134 TGTGTGTGTGGGAAGCTCTAC 59.930 52.381 0.00 0.00 0.00 2.59
3696 3898 1.204941 GTGTGTGGGAAGCTCTACGAT 59.795 52.381 0.00 0.00 0.00 3.73
3697 3899 1.204704 TGTGTGGGAAGCTCTACGATG 59.795 52.381 0.00 0.00 0.00 3.84
3698 3900 0.175760 TGTGGGAAGCTCTACGATGC 59.824 55.000 0.00 0.00 0.00 3.91
3708 3967 1.299468 CTACGATGCGCCACTCCTC 60.299 63.158 4.18 0.00 0.00 3.71
3712 3971 2.755876 ATGCGCCACTCCTCTCGA 60.756 61.111 4.18 0.00 0.00 4.04
3747 4006 2.450320 CCCAGGGATCCAGCCTGAG 61.450 68.421 15.23 0.00 33.87 3.35
3812 4071 2.363018 GGGGGAAGAAAGGCTGGC 60.363 66.667 0.00 0.00 0.00 4.85
3875 4135 6.435428 TCTTCTTTGCTACGATTTTTCCAAC 58.565 36.000 0.00 0.00 0.00 3.77
3893 4153 1.692411 ACACAGAGCAGTTTTTCCCC 58.308 50.000 0.00 0.00 0.00 4.81
3894 4154 0.593128 CACAGAGCAGTTTTTCCCCG 59.407 55.000 0.00 0.00 0.00 5.73
3895 4155 1.172812 ACAGAGCAGTTTTTCCCCGC 61.173 55.000 0.00 0.00 0.00 6.13
3896 4156 1.966451 AGAGCAGTTTTTCCCCGCG 60.966 57.895 0.00 0.00 0.00 6.46
3897 4157 2.978018 GAGCAGTTTTTCCCCGCGG 61.978 63.158 21.04 21.04 0.00 6.46
3898 4158 3.292159 GCAGTTTTTCCCCGCGGT 61.292 61.111 26.12 0.00 0.00 5.68
3899 4159 2.852180 GCAGTTTTTCCCCGCGGTT 61.852 57.895 26.12 0.00 0.00 4.44
3900 4160 1.007849 CAGTTTTTCCCCGCGGTTG 60.008 57.895 26.12 15.28 0.00 3.77
3901 4161 2.355363 GTTTTTCCCCGCGGTTGC 60.355 61.111 26.12 2.83 37.91 4.17
3902 4162 2.519780 TTTTTCCCCGCGGTTGCT 60.520 55.556 26.12 0.00 39.65 3.91
3903 4163 1.228184 TTTTTCCCCGCGGTTGCTA 60.228 52.632 26.12 3.10 39.65 3.49
3904 4164 0.609681 TTTTTCCCCGCGGTTGCTAT 60.610 50.000 26.12 0.00 39.65 2.97
3905 4165 0.609681 TTTTCCCCGCGGTTGCTATT 60.610 50.000 26.12 0.00 39.65 1.73
3906 4166 0.609681 TTTCCCCGCGGTTGCTATTT 60.610 50.000 26.12 0.00 39.65 1.40
3907 4167 0.252479 TTCCCCGCGGTTGCTATTTA 59.748 50.000 26.12 0.00 39.65 1.40
3908 4168 0.470766 TCCCCGCGGTTGCTATTTAT 59.529 50.000 26.12 0.00 39.65 1.40
3909 4169 0.872388 CCCCGCGGTTGCTATTTATC 59.128 55.000 26.12 0.00 39.65 1.75
3910 4170 0.511221 CCCGCGGTTGCTATTTATCG 59.489 55.000 26.12 0.00 39.65 2.92
3911 4171 0.110823 CCGCGGTTGCTATTTATCGC 60.111 55.000 19.50 0.00 39.65 4.58
3912 4172 0.579630 CGCGGTTGCTATTTATCGCA 59.420 50.000 0.00 0.00 42.75 5.10
3913 4173 1.194547 CGCGGTTGCTATTTATCGCAT 59.805 47.619 0.00 0.00 42.75 4.73
3914 4174 2.721797 CGCGGTTGCTATTTATCGCATC 60.722 50.000 0.00 0.00 42.75 3.91
3915 4175 2.223144 GCGGTTGCTATTTATCGCATCA 59.777 45.455 0.00 0.00 42.27 3.07
3916 4176 3.303725 GCGGTTGCTATTTATCGCATCAA 60.304 43.478 0.00 0.00 42.27 2.57
3917 4177 4.457810 CGGTTGCTATTTATCGCATCAAG 58.542 43.478 0.00 0.00 35.85 3.02
3918 4178 4.222114 GGTTGCTATTTATCGCATCAAGC 58.778 43.478 0.00 0.00 35.85 4.01
3931 4191 4.472691 GCATCAAGCGATTGTAATAGCA 57.527 40.909 13.85 0.00 39.16 3.49
3932 4192 4.461405 GCATCAAGCGATTGTAATAGCAG 58.539 43.478 13.85 4.74 39.16 4.24
3933 4193 4.024556 GCATCAAGCGATTGTAATAGCAGT 60.025 41.667 13.85 0.00 39.16 4.40
3934 4194 5.504665 GCATCAAGCGATTGTAATAGCAGTT 60.505 40.000 13.85 0.00 39.16 3.16
3935 4195 6.489675 CATCAAGCGATTGTAATAGCAGTTT 58.510 36.000 13.85 0.00 39.16 2.66
3936 4196 6.494893 TCAAGCGATTGTAATAGCAGTTTT 57.505 33.333 13.85 0.00 39.16 2.43
3937 4197 6.542852 TCAAGCGATTGTAATAGCAGTTTTC 58.457 36.000 13.85 0.00 39.16 2.29
3938 4198 5.143916 AGCGATTGTAATAGCAGTTTTCG 57.856 39.130 11.34 0.00 39.16 3.46
3939 4199 3.719352 GCGATTGTAATAGCAGTTTTCGC 59.281 43.478 5.06 0.00 41.89 4.70
3940 4200 4.494199 GCGATTGTAATAGCAGTTTTCGCT 60.494 41.667 6.26 0.00 44.21 4.93
3941 4201 5.560148 CGATTGTAATAGCAGTTTTCGCTT 58.440 37.500 0.00 0.00 40.96 4.68
3942 4202 6.701937 CGATTGTAATAGCAGTTTTCGCTTA 58.298 36.000 0.00 0.00 40.96 3.09
3943 4203 7.177407 CGATTGTAATAGCAGTTTTCGCTTAA 58.823 34.615 0.00 0.00 40.96 1.85
3944 4204 7.370836 CGATTGTAATAGCAGTTTTCGCTTAAG 59.629 37.037 0.00 0.00 40.96 1.85
3945 4205 5.864986 TGTAATAGCAGTTTTCGCTTAAGC 58.135 37.500 17.83 17.83 40.96 3.09
3970 4230 4.104143 GCCTCACGACGTATTGGG 57.896 61.111 0.00 1.82 0.00 4.12
3971 4231 2.171725 GCCTCACGACGTATTGGGC 61.172 63.158 0.00 8.45 0.00 5.36
3972 4232 1.515954 CCTCACGACGTATTGGGCT 59.484 57.895 0.00 0.00 0.00 5.19
3973 4233 0.806102 CCTCACGACGTATTGGGCTG 60.806 60.000 0.00 0.00 0.00 4.85
3974 4234 0.806102 CTCACGACGTATTGGGCTGG 60.806 60.000 0.00 0.00 0.00 4.85
3975 4235 2.125269 ACGACGTATTGGGCTGGC 60.125 61.111 0.00 0.00 0.00 4.85
3976 4236 2.895372 CGACGTATTGGGCTGGCC 60.895 66.667 14.23 14.23 0.00 5.36
3986 4246 3.887868 GGCTGGCCCATTTACGCG 61.888 66.667 3.53 3.53 0.00 6.01
3987 4247 4.552745 GCTGGCCCATTTACGCGC 62.553 66.667 5.73 0.00 0.00 6.86
3988 4248 4.236416 CTGGCCCATTTACGCGCG 62.236 66.667 30.96 30.96 0.00 6.86
3993 4253 3.582120 CCATTTACGCGCGCCCAT 61.582 61.111 32.58 16.29 0.00 4.00
3994 4254 2.407210 CATTTACGCGCGCCCATT 59.593 55.556 32.58 13.11 0.00 3.16
3995 4255 1.654137 CATTTACGCGCGCCCATTC 60.654 57.895 32.58 0.00 0.00 2.67
3996 4256 3.163110 ATTTACGCGCGCCCATTCG 62.163 57.895 32.58 13.10 0.00 3.34
3999 4259 3.696664 TACGCGCGCCCATTCGTTA 62.697 57.895 32.58 8.47 36.50 3.18
4000 4260 4.568876 CGCGCGCCCATTCGTTAC 62.569 66.667 27.72 0.00 0.00 2.50
4001 4261 3.492545 GCGCGCCCATTCGTTACA 61.493 61.111 23.24 0.00 0.00 2.41
4002 4262 3.029564 GCGCGCCCATTCGTTACAA 62.030 57.895 23.24 0.00 0.00 2.41
4003 4263 1.498166 CGCGCCCATTCGTTACAAA 59.502 52.632 0.00 0.00 0.00 2.83
4004 4264 0.110147 CGCGCCCATTCGTTACAAAA 60.110 50.000 0.00 0.00 0.00 2.44
4005 4265 1.333115 GCGCCCATTCGTTACAAAAC 58.667 50.000 0.00 0.00 0.00 2.43
4006 4266 1.335142 GCGCCCATTCGTTACAAAACA 60.335 47.619 0.00 0.00 35.16 2.83
4007 4267 2.580589 CGCCCATTCGTTACAAAACAG 58.419 47.619 0.00 0.00 35.16 3.16
4008 4268 2.667171 CGCCCATTCGTTACAAAACAGG 60.667 50.000 0.00 0.00 35.16 4.00
4009 4269 2.924880 GCCCATTCGTTACAAAACAGGC 60.925 50.000 0.00 0.00 35.16 4.85
4010 4270 2.580589 CCATTCGTTACAAAACAGGCG 58.419 47.619 0.00 0.00 35.16 5.52
4011 4271 2.224549 CCATTCGTTACAAAACAGGCGA 59.775 45.455 0.00 0.00 35.16 5.54
4012 4272 3.304123 CCATTCGTTACAAAACAGGCGAA 60.304 43.478 0.00 0.00 41.44 4.70
4013 4273 3.322230 TTCGTTACAAAACAGGCGAAC 57.678 42.857 0.00 0.00 35.16 3.95
4014 4274 2.553086 TCGTTACAAAACAGGCGAACT 58.447 42.857 0.00 0.00 35.16 3.01
4026 4286 4.201208 CAGGCGAACTGCTATTACAATG 57.799 45.455 0.00 0.00 45.43 2.82
4027 4287 3.623060 CAGGCGAACTGCTATTACAATGT 59.377 43.478 0.00 0.00 45.43 2.71
4028 4288 4.094887 CAGGCGAACTGCTATTACAATGTT 59.905 41.667 0.00 0.00 45.43 2.71
4029 4289 4.700213 AGGCGAACTGCTATTACAATGTTT 59.300 37.500 0.00 0.00 45.43 2.83
4030 4290 5.183140 AGGCGAACTGCTATTACAATGTTTT 59.817 36.000 0.00 0.00 45.43 2.43
4031 4291 5.286082 GGCGAACTGCTATTACAATGTTTTG 59.714 40.000 0.00 0.00 45.43 2.44
4032 4292 5.286082 GCGAACTGCTATTACAATGTTTTGG 59.714 40.000 0.00 0.00 41.73 3.28
4033 4293 5.799936 CGAACTGCTATTACAATGTTTTGGG 59.200 40.000 0.00 0.00 37.15 4.12
4034 4294 5.072040 ACTGCTATTACAATGTTTTGGGC 57.928 39.130 0.00 0.00 37.15 5.36
4035 4295 4.772100 ACTGCTATTACAATGTTTTGGGCT 59.228 37.500 0.00 0.00 37.15 5.19
4036 4296 5.070770 TGCTATTACAATGTTTTGGGCTG 57.929 39.130 0.00 0.00 37.15 4.85
4037 4297 4.769488 TGCTATTACAATGTTTTGGGCTGA 59.231 37.500 0.00 0.00 37.15 4.26
4038 4298 5.244851 TGCTATTACAATGTTTTGGGCTGAA 59.755 36.000 0.00 0.00 37.15 3.02
4039 4299 6.162777 GCTATTACAATGTTTTGGGCTGAAA 58.837 36.000 0.00 0.00 37.15 2.69
4040 4300 6.648725 GCTATTACAATGTTTTGGGCTGAAAA 59.351 34.615 0.00 0.00 37.15 2.29
4041 4301 7.148590 GCTATTACAATGTTTTGGGCTGAAAAG 60.149 37.037 0.00 0.00 37.15 2.27
4042 4302 3.807553 ACAATGTTTTGGGCTGAAAAGG 58.192 40.909 0.00 0.00 37.15 3.11
4043 4303 3.454082 ACAATGTTTTGGGCTGAAAAGGA 59.546 39.130 0.00 0.00 37.15 3.36
4044 4304 4.060205 CAATGTTTTGGGCTGAAAAGGAG 58.940 43.478 0.00 0.00 0.00 3.69
4045 4305 2.038659 TGTTTTGGGCTGAAAAGGAGG 58.961 47.619 0.00 0.00 0.00 4.30
4046 4306 1.344438 GTTTTGGGCTGAAAAGGAGGG 59.656 52.381 0.00 0.00 0.00 4.30
4047 4307 0.856982 TTTGGGCTGAAAAGGAGGGA 59.143 50.000 0.00 0.00 0.00 4.20
4048 4308 1.084018 TTGGGCTGAAAAGGAGGGAT 58.916 50.000 0.00 0.00 0.00 3.85
4049 4309 1.979809 TGGGCTGAAAAGGAGGGATA 58.020 50.000 0.00 0.00 0.00 2.59
4050 4310 2.283834 TGGGCTGAAAAGGAGGGATAA 58.716 47.619 0.00 0.00 0.00 1.75
4051 4311 2.652348 TGGGCTGAAAAGGAGGGATAAA 59.348 45.455 0.00 0.00 0.00 1.40
4052 4312 3.076785 TGGGCTGAAAAGGAGGGATAAAA 59.923 43.478 0.00 0.00 0.00 1.52
4053 4313 3.447586 GGGCTGAAAAGGAGGGATAAAAC 59.552 47.826 0.00 0.00 0.00 2.43
4054 4314 3.447586 GGCTGAAAAGGAGGGATAAAACC 59.552 47.826 0.00 0.00 0.00 3.27
4063 4323 1.977056 GGGATAAAACCCGGGTCATC 58.023 55.000 30.40 26.69 40.49 2.92
4064 4324 1.213430 GGGATAAAACCCGGGTCATCA 59.787 52.381 30.40 13.33 40.49 3.07
4065 4325 2.572290 GGATAAAACCCGGGTCATCAG 58.428 52.381 30.40 0.00 0.00 2.90
4066 4326 1.947456 GATAAAACCCGGGTCATCAGC 59.053 52.381 30.40 11.89 0.00 4.26
4067 4327 0.391927 TAAAACCCGGGTCATCAGCG 60.392 55.000 30.40 0.00 0.00 5.18
4068 4328 2.119484 AAAACCCGGGTCATCAGCGA 62.119 55.000 30.40 0.00 0.00 4.93
4069 4329 2.521958 AAACCCGGGTCATCAGCGAG 62.522 60.000 30.40 0.00 0.00 5.03
4070 4330 4.227134 CCCGGGTCATCAGCGAGG 62.227 72.222 14.18 0.00 0.00 4.63
4071 4331 4.227134 CCGGGTCATCAGCGAGGG 62.227 72.222 0.00 0.00 0.00 4.30
4072 4332 4.899239 CGGGTCATCAGCGAGGGC 62.899 72.222 0.00 0.00 40.37 5.19
4073 4333 4.899239 GGGTCATCAGCGAGGGCG 62.899 72.222 0.00 0.00 46.35 6.13
4090 4350 3.350612 GCACGCCACGCTAACCAA 61.351 61.111 0.00 0.00 0.00 3.67
4091 4351 2.554272 CACGCCACGCTAACCAAC 59.446 61.111 0.00 0.00 0.00 3.77
4092 4352 3.039588 ACGCCACGCTAACCAACG 61.040 61.111 0.00 0.00 0.00 4.10
4093 4353 3.039588 CGCCACGCTAACCAACGT 61.040 61.111 0.00 0.00 44.75 3.99
4094 4354 2.858158 GCCACGCTAACCAACGTC 59.142 61.111 0.00 0.00 41.32 4.34
4095 4355 2.674084 GCCACGCTAACCAACGTCC 61.674 63.158 0.00 0.00 41.32 4.79
4096 4356 2.030958 CCACGCTAACCAACGTCCC 61.031 63.158 0.00 0.00 41.32 4.46
4097 4357 2.048877 ACGCTAACCAACGTCCCG 60.049 61.111 0.00 0.00 38.28 5.14
4098 4358 2.048877 CGCTAACCAACGTCCCGT 60.049 61.111 0.00 0.00 43.97 5.28
4099 4359 2.090524 CGCTAACCAACGTCCCGTC 61.091 63.158 0.00 0.00 39.99 4.79
4100 4360 1.005867 GCTAACCAACGTCCCGTCA 60.006 57.895 0.00 0.00 39.99 4.35
4101 4361 0.600782 GCTAACCAACGTCCCGTCAA 60.601 55.000 0.00 0.00 39.99 3.18
4102 4362 1.868469 CTAACCAACGTCCCGTCAAA 58.132 50.000 0.00 0.00 39.99 2.69
4103 4363 2.211806 CTAACCAACGTCCCGTCAAAA 58.788 47.619 0.00 0.00 39.99 2.44
4104 4364 1.461559 AACCAACGTCCCGTCAAAAA 58.538 45.000 0.00 0.00 39.99 1.94
4120 4380 2.697819 AAAAACCACTCCACCGACG 58.302 52.632 0.00 0.00 0.00 5.12
4121 4381 0.107557 AAAAACCACTCCACCGACGT 60.108 50.000 0.00 0.00 0.00 4.34
4122 4382 0.107557 AAAACCACTCCACCGACGTT 60.108 50.000 0.00 0.00 0.00 3.99
4123 4383 0.531311 AAACCACTCCACCGACGTTC 60.531 55.000 0.00 0.00 0.00 3.95
4124 4384 1.397390 AACCACTCCACCGACGTTCT 61.397 55.000 0.00 0.00 0.00 3.01
4125 4385 1.366366 CCACTCCACCGACGTTCTT 59.634 57.895 0.00 0.00 0.00 2.52
4126 4386 0.249741 CCACTCCACCGACGTTCTTT 60.250 55.000 0.00 0.00 0.00 2.52
4127 4387 1.137513 CACTCCACCGACGTTCTTTC 58.862 55.000 0.00 0.00 0.00 2.62
4128 4388 0.748450 ACTCCACCGACGTTCTTTCA 59.252 50.000 0.00 0.00 0.00 2.69
4129 4389 1.343465 ACTCCACCGACGTTCTTTCAT 59.657 47.619 0.00 0.00 0.00 2.57
4130 4390 2.224209 ACTCCACCGACGTTCTTTCATT 60.224 45.455 0.00 0.00 0.00 2.57
4131 4391 2.409975 TCCACCGACGTTCTTTCATTC 58.590 47.619 0.00 0.00 0.00 2.67
4132 4392 2.139917 CCACCGACGTTCTTTCATTCA 58.860 47.619 0.00 0.00 0.00 2.57
4133 4393 2.742053 CCACCGACGTTCTTTCATTCAT 59.258 45.455 0.00 0.00 0.00 2.57
4134 4394 3.188460 CCACCGACGTTCTTTCATTCATT 59.812 43.478 0.00 0.00 0.00 2.57
4135 4395 4.320202 CCACCGACGTTCTTTCATTCATTT 60.320 41.667 0.00 0.00 0.00 2.32
4136 4396 5.212194 CACCGACGTTCTTTCATTCATTTT 58.788 37.500 0.00 0.00 0.00 1.82
4137 4397 5.685511 CACCGACGTTCTTTCATTCATTTTT 59.314 36.000 0.00 0.00 0.00 1.94
4138 4398 5.685511 ACCGACGTTCTTTCATTCATTTTTG 59.314 36.000 0.00 0.00 0.00 2.44
4139 4399 5.387342 CCGACGTTCTTTCATTCATTTTTGC 60.387 40.000 0.00 0.00 0.00 3.68
4140 4400 5.172951 CGACGTTCTTTCATTCATTTTTGCA 59.827 36.000 0.00 0.00 0.00 4.08
4141 4401 6.129115 CGACGTTCTTTCATTCATTTTTGCAT 60.129 34.615 0.00 0.00 0.00 3.96
4142 4402 7.481275 ACGTTCTTTCATTCATTTTTGCATT 57.519 28.000 0.00 0.00 0.00 3.56
4143 4403 7.918643 ACGTTCTTTCATTCATTTTTGCATTT 58.081 26.923 0.00 0.00 0.00 2.32
4144 4404 8.397148 ACGTTCTTTCATTCATTTTTGCATTTT 58.603 25.926 0.00 0.00 0.00 1.82
4145 4405 8.675016 CGTTCTTTCATTCATTTTTGCATTTTG 58.325 29.630 0.00 0.00 0.00 2.44
4146 4406 9.505995 GTTCTTTCATTCATTTTTGCATTTTGT 57.494 25.926 0.00 0.00 0.00 2.83
4216 4476 7.841915 TTTTGTTTGGTTCTCATTTTTCTCC 57.158 32.000 0.00 0.00 0.00 3.71
4217 4477 6.790232 TTGTTTGGTTCTCATTTTTCTCCT 57.210 33.333 0.00 0.00 0.00 3.69
4218 4478 6.391227 TGTTTGGTTCTCATTTTTCTCCTC 57.609 37.500 0.00 0.00 0.00 3.71
4219 4479 5.301805 TGTTTGGTTCTCATTTTTCTCCTCC 59.698 40.000 0.00 0.00 0.00 4.30
4220 4480 4.722526 TGGTTCTCATTTTTCTCCTCCA 57.277 40.909 0.00 0.00 0.00 3.86
4221 4481 5.261040 TGGTTCTCATTTTTCTCCTCCAT 57.739 39.130 0.00 0.00 0.00 3.41
4222 4482 5.644188 TGGTTCTCATTTTTCTCCTCCATT 58.356 37.500 0.00 0.00 0.00 3.16
4223 4483 6.077322 TGGTTCTCATTTTTCTCCTCCATTT 58.923 36.000 0.00 0.00 0.00 2.32
4224 4484 6.554605 TGGTTCTCATTTTTCTCCTCCATTTT 59.445 34.615 0.00 0.00 0.00 1.82
4225 4485 7.071071 TGGTTCTCATTTTTCTCCTCCATTTTT 59.929 33.333 0.00 0.00 0.00 1.94
4246 4506 6.937886 TTTTGTTGGTTCGTTTTTCTTCTC 57.062 33.333 0.00 0.00 0.00 2.87
4247 4507 4.625972 TGTTGGTTCGTTTTTCTTCTCC 57.374 40.909 0.00 0.00 0.00 3.71
4248 4508 4.011023 TGTTGGTTCGTTTTTCTTCTCCA 58.989 39.130 0.00 0.00 0.00 3.86
4249 4509 4.142556 TGTTGGTTCGTTTTTCTTCTCCAC 60.143 41.667 0.00 0.00 0.00 4.02
4250 4510 2.946990 TGGTTCGTTTTTCTTCTCCACC 59.053 45.455 0.00 0.00 0.00 4.61
4251 4511 3.211865 GGTTCGTTTTTCTTCTCCACCT 58.788 45.455 0.00 0.00 0.00 4.00
4252 4512 3.630769 GGTTCGTTTTTCTTCTCCACCTT 59.369 43.478 0.00 0.00 0.00 3.50
4253 4513 4.097437 GGTTCGTTTTTCTTCTCCACCTTT 59.903 41.667 0.00 0.00 0.00 3.11
4254 4514 5.393787 GGTTCGTTTTTCTTCTCCACCTTTT 60.394 40.000 0.00 0.00 0.00 2.27
4255 4515 5.243426 TCGTTTTTCTTCTCCACCTTTTG 57.757 39.130 0.00 0.00 0.00 2.44
4256 4516 4.703093 TCGTTTTTCTTCTCCACCTTTTGT 59.297 37.500 0.00 0.00 0.00 2.83
4257 4517 5.184287 TCGTTTTTCTTCTCCACCTTTTGTT 59.816 36.000 0.00 0.00 0.00 2.83
4258 4518 5.867174 CGTTTTTCTTCTCCACCTTTTGTTT 59.133 36.000 0.00 0.00 0.00 2.83
4259 4519 6.367695 CGTTTTTCTTCTCCACCTTTTGTTTT 59.632 34.615 0.00 0.00 0.00 2.43
4260 4520 7.095397 CGTTTTTCTTCTCCACCTTTTGTTTTT 60.095 33.333 0.00 0.00 0.00 1.94
4285 4545 8.973835 TTCTTATGTTTGTTTTCGTTTTCACT 57.026 26.923 0.00 0.00 0.00 3.41
4286 4546 8.609478 TCTTATGTTTGTTTTCGTTTTCACTC 57.391 30.769 0.00 0.00 0.00 3.51
4287 4547 8.455682 TCTTATGTTTGTTTTCGTTTTCACTCT 58.544 29.630 0.00 0.00 0.00 3.24
4288 4548 9.710979 CTTATGTTTGTTTTCGTTTTCACTCTA 57.289 29.630 0.00 0.00 0.00 2.43
4289 4549 7.964545 ATGTTTGTTTTCGTTTTCACTCTAC 57.035 32.000 0.00 0.00 0.00 2.59
4290 4550 6.900189 TGTTTGTTTTCGTTTTCACTCTACA 58.100 32.000 0.00 0.00 0.00 2.74
4291 4551 7.531716 TGTTTGTTTTCGTTTTCACTCTACAT 58.468 30.769 0.00 0.00 0.00 2.29
4292 4552 8.024285 TGTTTGTTTTCGTTTTCACTCTACATT 58.976 29.630 0.00 0.00 0.00 2.71
4293 4553 8.856247 GTTTGTTTTCGTTTTCACTCTACATTT 58.144 29.630 0.00 0.00 0.00 2.32
4294 4554 8.973835 TTGTTTTCGTTTTCACTCTACATTTT 57.026 26.923 0.00 0.00 0.00 1.82
4295 4555 8.973835 TGTTTTCGTTTTCACTCTACATTTTT 57.026 26.923 0.00 0.00 0.00 1.94
4296 4556 8.855279 TGTTTTCGTTTTCACTCTACATTTTTG 58.145 29.630 0.00 0.00 0.00 2.44
4297 4557 8.856247 GTTTTCGTTTTCACTCTACATTTTTGT 58.144 29.630 0.00 0.00 0.00 2.83
4300 4560 9.658475 TTCGTTTTCACTCTACATTTTTGTATG 57.342 29.630 0.00 0.00 0.00 2.39
4301 4561 8.832521 TCGTTTTCACTCTACATTTTTGTATGT 58.167 29.630 0.00 0.00 41.43 2.29
4302 4562 8.891928 CGTTTTCACTCTACATTTTTGTATGTG 58.108 33.333 0.00 10.50 39.06 3.21
4303 4563 9.730420 GTTTTCACTCTACATTTTTGTATGTGT 57.270 29.630 13.76 0.00 39.06 3.72
4304 4564 9.944663 TTTTCACTCTACATTTTTGTATGTGTC 57.055 29.630 13.76 0.00 39.06 3.67
4305 4565 8.669946 TTCACTCTACATTTTTGTATGTGTCA 57.330 30.769 13.76 0.00 39.06 3.58
4306 4566 8.669946 TCACTCTACATTTTTGTATGTGTCAA 57.330 30.769 13.76 0.00 39.06 3.18
4307 4567 9.114952 TCACTCTACATTTTTGTATGTGTCAAA 57.885 29.630 13.76 0.00 39.06 2.69
4308 4568 9.729023 CACTCTACATTTTTGTATGTGTCAAAA 57.271 29.630 0.00 0.00 41.13 2.44
4349 4609 8.999431 AGTGATCAACATTTTCTTTATACACGT 58.001 29.630 0.00 0.00 0.00 4.49
4350 4610 9.607285 GTGATCAACATTTTCTTTATACACGTT 57.393 29.630 0.00 0.00 0.00 3.99
4361 4621 9.881529 TTTCTTTATACACGTTTAACATTGTCC 57.118 29.630 3.06 0.00 0.00 4.02
4362 4622 7.731720 TCTTTATACACGTTTAACATTGTCCG 58.268 34.615 3.06 0.00 0.00 4.79
4363 4623 7.598118 TCTTTATACACGTTTAACATTGTCCGA 59.402 33.333 3.06 0.00 0.00 4.55
4364 4624 7.649370 TTATACACGTTTAACATTGTCCGAA 57.351 32.000 3.06 0.00 0.00 4.30
4365 4625 6.730960 ATACACGTTTAACATTGTCCGAAT 57.269 33.333 3.06 0.00 0.00 3.34
4366 4626 4.778904 ACACGTTTAACATTGTCCGAATG 58.221 39.130 0.00 0.00 0.00 2.67
4367 4627 3.602062 CACGTTTAACATTGTCCGAATGC 59.398 43.478 0.00 0.00 0.00 3.56
4368 4628 3.500680 ACGTTTAACATTGTCCGAATGCT 59.499 39.130 0.00 0.00 0.00 3.79
4369 4629 4.023536 ACGTTTAACATTGTCCGAATGCTT 60.024 37.500 0.00 0.00 0.00 3.91
4370 4630 5.179742 ACGTTTAACATTGTCCGAATGCTTA 59.820 36.000 0.00 0.00 0.00 3.09
4371 4631 6.128117 ACGTTTAACATTGTCCGAATGCTTAT 60.128 34.615 0.00 0.00 0.00 1.73
4372 4632 7.064847 ACGTTTAACATTGTCCGAATGCTTATA 59.935 33.333 0.00 0.00 0.00 0.98
4373 4633 7.906010 CGTTTAACATTGTCCGAATGCTTATAA 59.094 33.333 0.00 0.00 0.00 0.98
4374 4634 9.730420 GTTTAACATTGTCCGAATGCTTATAAT 57.270 29.630 0.00 0.00 0.00 1.28
4375 4635 9.944663 TTTAACATTGTCCGAATGCTTATAATC 57.055 29.630 0.00 0.00 0.00 1.75
4376 4636 6.228273 ACATTGTCCGAATGCTTATAATCG 57.772 37.500 0.00 0.24 35.19 3.34
4377 4637 5.758296 ACATTGTCCGAATGCTTATAATCGT 59.242 36.000 5.70 0.00 33.65 3.73
4378 4638 6.260050 ACATTGTCCGAATGCTTATAATCGTT 59.740 34.615 5.70 0.27 33.65 3.85
4379 4639 7.439955 ACATTGTCCGAATGCTTATAATCGTTA 59.560 33.333 5.70 0.00 33.65 3.18
4380 4640 7.773864 TTGTCCGAATGCTTATAATCGTTAA 57.226 32.000 5.70 0.00 33.65 2.01
4381 4641 7.773864 TGTCCGAATGCTTATAATCGTTAAA 57.226 32.000 5.70 0.00 33.65 1.52
4382 4642 8.199176 TGTCCGAATGCTTATAATCGTTAAAA 57.801 30.769 5.70 0.00 33.65 1.52
4383 4643 8.666573 TGTCCGAATGCTTATAATCGTTAAAAA 58.333 29.630 5.70 0.00 33.65 1.94
4402 4662 5.674933 AAAAACAGGCGAACTAAGAGAAG 57.325 39.130 0.00 0.00 0.00 2.85
4403 4663 3.320673 AACAGGCGAACTAAGAGAAGG 57.679 47.619 0.00 0.00 0.00 3.46
4404 4664 2.526432 ACAGGCGAACTAAGAGAAGGA 58.474 47.619 0.00 0.00 0.00 3.36
4405 4665 2.494073 ACAGGCGAACTAAGAGAAGGAG 59.506 50.000 0.00 0.00 0.00 3.69
4406 4666 2.104170 AGGCGAACTAAGAGAAGGAGG 58.896 52.381 0.00 0.00 0.00 4.30
4407 4667 1.137282 GGCGAACTAAGAGAAGGAGGG 59.863 57.143 0.00 0.00 0.00 4.30
4408 4668 2.100989 GCGAACTAAGAGAAGGAGGGA 58.899 52.381 0.00 0.00 0.00 4.20
4409 4669 2.696187 GCGAACTAAGAGAAGGAGGGAT 59.304 50.000 0.00 0.00 0.00 3.85
4410 4670 3.890147 GCGAACTAAGAGAAGGAGGGATA 59.110 47.826 0.00 0.00 0.00 2.59
4411 4671 4.022676 GCGAACTAAGAGAAGGAGGGATAG 60.023 50.000 0.00 0.00 0.00 2.08
4412 4672 5.378332 CGAACTAAGAGAAGGAGGGATAGA 58.622 45.833 0.00 0.00 0.00 1.98
4413 4673 5.828859 CGAACTAAGAGAAGGAGGGATAGAA 59.171 44.000 0.00 0.00 0.00 2.10
4414 4674 6.238814 CGAACTAAGAGAAGGAGGGATAGAAC 60.239 46.154 0.00 0.00 0.00 3.01
4415 4675 5.460416 ACTAAGAGAAGGAGGGATAGAACC 58.540 45.833 0.00 0.00 0.00 3.62
4422 4682 4.386591 GGGATAGAACCCGGGTCA 57.613 61.111 30.40 16.20 40.49 4.02
4423 4683 2.850016 GGGATAGAACCCGGGTCAT 58.150 57.895 30.40 21.16 40.49 3.06
4424 4684 0.685660 GGGATAGAACCCGGGTCATC 59.314 60.000 30.40 26.69 40.49 2.92
4425 4685 1.420430 GGATAGAACCCGGGTCATCA 58.580 55.000 30.40 13.33 0.00 3.07
4426 4686 1.344763 GGATAGAACCCGGGTCATCAG 59.655 57.143 30.40 0.00 0.00 2.90
4427 4687 0.759346 ATAGAACCCGGGTCATCAGC 59.241 55.000 30.40 12.27 0.00 4.26
4428 4688 1.672854 TAGAACCCGGGTCATCAGCG 61.673 60.000 30.40 0.00 0.00 5.18
4429 4689 3.000819 AACCCGGGTCATCAGCGA 61.001 61.111 30.40 0.00 0.00 4.93
4430 4690 2.907897 GAACCCGGGTCATCAGCGAG 62.908 65.000 30.40 0.00 0.00 5.03
4431 4691 4.227134 CCCGGGTCATCAGCGAGG 62.227 72.222 14.18 0.00 0.00 4.63
4432 4692 4.227134 CCGGGTCATCAGCGAGGG 62.227 72.222 0.00 0.00 0.00 4.30
4433 4693 4.899239 CGGGTCATCAGCGAGGGC 62.899 72.222 0.00 0.00 40.37 5.19
4434 4694 4.899239 GGGTCATCAGCGAGGGCG 62.899 72.222 0.00 0.00 46.35 6.13
4451 4711 4.445545 GCACGCTGCGCTAACCAC 62.446 66.667 23.51 0.00 31.71 4.16
4452 4712 2.738521 CACGCTGCGCTAACCACT 60.739 61.111 23.51 0.00 0.00 4.00
4453 4713 2.432628 ACGCTGCGCTAACCACTC 60.433 61.111 23.51 0.00 0.00 3.51
4454 4714 3.188786 CGCTGCGCTAACCACTCC 61.189 66.667 9.88 0.00 0.00 3.85
4455 4715 2.047274 GCTGCGCTAACCACTCCA 60.047 61.111 9.73 0.00 0.00 3.86
4456 4716 2.391389 GCTGCGCTAACCACTCCAC 61.391 63.158 9.73 0.00 0.00 4.02
4457 4717 1.741770 CTGCGCTAACCACTCCACC 60.742 63.158 9.73 0.00 0.00 4.61
4458 4718 2.813908 GCGCTAACCACTCCACCG 60.814 66.667 0.00 0.00 0.00 4.94
4459 4719 2.967397 CGCTAACCACTCCACCGA 59.033 61.111 0.00 0.00 0.00 4.69
4460 4720 1.445582 CGCTAACCACTCCACCGAC 60.446 63.158 0.00 0.00 0.00 4.79
4461 4721 1.445582 GCTAACCACTCCACCGACG 60.446 63.158 0.00 0.00 0.00 5.12
4462 4722 1.962144 CTAACCACTCCACCGACGT 59.038 57.895 0.00 0.00 0.00 4.34
4463 4723 1.167851 CTAACCACTCCACCGACGTA 58.832 55.000 0.00 0.00 0.00 3.57
4464 4724 1.131883 CTAACCACTCCACCGACGTAG 59.868 57.143 0.00 0.00 0.00 3.51
4465 4725 1.530013 AACCACTCCACCGACGTAGG 61.530 60.000 13.72 13.72 37.30 3.18
4466 4726 2.707849 CCACTCCACCGACGTAGGG 61.708 68.421 19.45 11.50 35.02 3.53
4467 4727 2.362120 ACTCCACCGACGTAGGGG 60.362 66.667 19.45 15.26 35.02 4.79
4468 4728 3.834799 CTCCACCGACGTAGGGGC 61.835 72.222 19.45 0.00 31.97 5.80
4476 4736 2.751436 ACGTAGGGGCGCGTCTTA 60.751 61.111 11.94 0.28 36.54 2.10
4477 4737 2.278401 CGTAGGGGCGCGTCTTAC 60.278 66.667 11.94 12.89 0.00 2.34
4478 4738 2.768492 CGTAGGGGCGCGTCTTACT 61.768 63.158 11.94 9.55 0.00 2.24
4479 4739 1.514553 GTAGGGGCGCGTCTTACTT 59.485 57.895 11.94 0.00 0.00 2.24
4480 4740 0.804933 GTAGGGGCGCGTCTTACTTG 60.805 60.000 11.94 0.00 0.00 3.16
4481 4741 0.966875 TAGGGGCGCGTCTTACTTGA 60.967 55.000 11.94 0.00 0.00 3.02
4482 4742 1.810030 GGGGCGCGTCTTACTTGAG 60.810 63.158 11.94 0.00 0.00 3.02
4483 4743 1.810030 GGGCGCGTCTTACTTGAGG 60.810 63.158 11.94 0.00 0.00 3.86
4484 4744 2.453638 GGCGCGTCTTACTTGAGGC 61.454 63.158 8.43 0.00 42.35 4.70
4485 4745 2.453638 GCGCGTCTTACTTGAGGCC 61.454 63.158 8.43 0.00 42.68 5.19
4486 4746 1.080093 CGCGTCTTACTTGAGGCCA 60.080 57.895 5.01 0.00 42.68 5.36
4487 4747 1.352156 CGCGTCTTACTTGAGGCCAC 61.352 60.000 5.01 0.00 42.68 5.01
4488 4748 0.037232 GCGTCTTACTTGAGGCCACT 60.037 55.000 5.01 0.00 40.63 4.00
4489 4749 1.997669 CGTCTTACTTGAGGCCACTC 58.002 55.000 5.01 0.00 44.23 3.51
4490 4750 1.404315 CGTCTTACTTGAGGCCACTCC 60.404 57.143 5.01 0.00 43.29 3.85
4491 4751 1.623811 GTCTTACTTGAGGCCACTCCA 59.376 52.381 5.01 0.00 43.29 3.86
4492 4752 1.902508 TCTTACTTGAGGCCACTCCAG 59.097 52.381 5.01 0.00 43.29 3.86
4493 4753 0.324943 TTACTTGAGGCCACTCCAGC 59.675 55.000 5.01 0.00 43.29 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.806856 GATTCGCTCGCTGCACAGG 61.807 63.158 0.00 0.00 43.06 4.00
1 2 2.699809 GATTCGCTCGCTGCACAG 59.300 61.111 0.00 0.00 43.06 3.66
74 80 5.333798 GGCTCGCTGCAAATATTTATTACGA 60.334 40.000 0.00 7.67 45.15 3.43
75 81 4.846137 GGCTCGCTGCAAATATTTATTACG 59.154 41.667 0.00 3.78 45.15 3.18
76 82 5.853282 CAGGCTCGCTGCAAATATTTATTAC 59.147 40.000 0.00 0.00 45.15 1.89
77 83 5.762711 TCAGGCTCGCTGCAAATATTTATTA 59.237 36.000 0.00 0.00 45.15 0.98
78 84 4.580167 TCAGGCTCGCTGCAAATATTTATT 59.420 37.500 0.00 0.00 45.15 1.40
186 192 1.732259 GCAGTCGATGGTGTAAGTTGG 59.268 52.381 0.00 0.00 0.00 3.77
223 229 5.406780 CGAGGATTAATCAGTAGTCCAATGC 59.593 44.000 17.07 0.00 40.35 3.56
235 241 4.443913 TGACGTTGACGAGGATTAATCA 57.556 40.909 17.07 0.00 43.02 2.57
236 242 5.518847 TCAATGACGTTGACGAGGATTAATC 59.481 40.000 10.87 6.93 41.79 1.75
297 306 1.623811 TCTGCCTGTGGTTCTACTTCC 59.376 52.381 0.00 0.00 0.00 3.46
312 321 0.033699 ATTTGCTTCCTCCCTCTGCC 60.034 55.000 0.00 0.00 0.00 4.85
452 461 1.243342 TTTCGGTGGATGCAAGCAGG 61.243 55.000 0.00 0.00 0.00 4.85
621 631 3.402628 AATAACGCAAGACCACTCTGT 57.597 42.857 0.00 0.00 43.62 3.41
650 660 5.598830 TGTCCTTGGTTGTAAATTTGGCTTA 59.401 36.000 0.00 0.00 0.00 3.09
794 836 2.286365 TCCTTTGCTTGAACCCGAAT 57.714 45.000 0.00 0.00 0.00 3.34
807 849 5.371115 TTTGGAAGCTCGTATTTCCTTTG 57.629 39.130 13.04 0.00 42.67 2.77
808 850 5.629079 CTTTGGAAGCTCGTATTTCCTTT 57.371 39.130 13.04 0.00 42.67 3.11
851 913 1.607756 AGGAGCTTGGAGACTCGCA 60.608 57.895 4.03 0.00 33.55 5.10
918 988 2.506231 TGTGGAGTGGAGGTGTGTTTTA 59.494 45.455 0.00 0.00 0.00 1.52
919 989 1.283613 TGTGGAGTGGAGGTGTGTTTT 59.716 47.619 0.00 0.00 0.00 2.43
986 1057 3.449227 CCATGGCACTGGCTGCTG 61.449 66.667 0.00 0.00 46.25 4.41
1236 1307 2.132352 GCAGGGGTAGGTCGGGTAG 61.132 68.421 0.00 0.00 0.00 3.18
1635 1706 9.586435 CTCATTGTGATTGTGATTGTAGTAGTA 57.414 33.333 0.00 0.00 0.00 1.82
1636 1707 7.065085 GCTCATTGTGATTGTGATTGTAGTAGT 59.935 37.037 0.00 0.00 0.00 2.73
1637 1708 7.279536 AGCTCATTGTGATTGTGATTGTAGTAG 59.720 37.037 0.00 0.00 0.00 2.57
1638 1709 7.105588 AGCTCATTGTGATTGTGATTGTAGTA 58.894 34.615 0.00 0.00 0.00 1.82
1639 1710 5.942236 AGCTCATTGTGATTGTGATTGTAGT 59.058 36.000 0.00 0.00 0.00 2.73
1640 1711 6.315642 AGAGCTCATTGTGATTGTGATTGTAG 59.684 38.462 17.77 0.00 0.00 2.74
1641 1712 6.175471 AGAGCTCATTGTGATTGTGATTGTA 58.825 36.000 17.77 0.00 0.00 2.41
1642 1713 5.008331 AGAGCTCATTGTGATTGTGATTGT 58.992 37.500 17.77 0.00 0.00 2.71
1643 1714 5.562506 AGAGCTCATTGTGATTGTGATTG 57.437 39.130 17.77 0.00 0.00 2.67
1644 1715 5.621555 GCAAGAGCTCATTGTGATTGTGATT 60.622 40.000 17.77 0.00 37.91 2.57
1645 1716 4.142447 GCAAGAGCTCATTGTGATTGTGAT 60.142 41.667 17.77 0.00 37.91 3.06
1646 1717 3.189910 GCAAGAGCTCATTGTGATTGTGA 59.810 43.478 17.77 0.00 37.91 3.58
1671 1742 8.367911 TCCTAACAGCACAATCTTAGGTATATG 58.632 37.037 0.00 0.00 37.55 1.78
1728 1804 4.267357 TGCACGAACTACAACAGAAAAC 57.733 40.909 0.00 0.00 0.00 2.43
1755 1831 2.224402 ACCAAAGAGGAGCAGAGTCAAC 60.224 50.000 0.00 0.00 41.22 3.18
1779 1856 4.322725 GGGGAAATGCCAAAGAAGTTAAGG 60.323 45.833 0.00 0.00 38.95 2.69
1820 1897 3.442625 TCATGAAAGATGGCAGCAAGAAG 59.557 43.478 5.19 0.00 0.00 2.85
1867 1967 2.043411 CAAAACGGATCAACAACAGCG 58.957 47.619 0.00 0.00 0.00 5.18
1908 2008 2.429250 GGGCGGGCATAAATAGTTTGTT 59.571 45.455 3.27 0.00 0.00 2.83
1909 2009 2.028876 GGGCGGGCATAAATAGTTTGT 58.971 47.619 3.27 0.00 0.00 2.83
1910 2010 1.001815 CGGGCGGGCATAAATAGTTTG 60.002 52.381 3.27 0.00 0.00 2.93
1911 2011 1.314730 CGGGCGGGCATAAATAGTTT 58.685 50.000 3.27 0.00 0.00 2.66
1952 2078 7.381139 ACAATTTTATTTTACGGTGACTGCTTG 59.619 33.333 0.00 0.00 0.00 4.01
1956 2082 9.325150 CTGTACAATTTTATTTTACGGTGACTG 57.675 33.333 0.00 0.00 0.00 3.51
1958 2084 8.291740 ACCTGTACAATTTTATTTTACGGTGAC 58.708 33.333 0.00 0.00 0.00 3.67
2064 2190 2.158769 CCAGGATGAATCGATCCACCAA 60.159 50.000 0.00 0.00 44.08 3.67
2241 2385 5.008019 CCAATCTCAATTATCGTTGGTGGAG 59.992 44.000 0.00 0.00 33.25 3.86
2250 2394 7.641411 CACAGTTTAAGCCAATCTCAATTATCG 59.359 37.037 0.00 0.00 0.00 2.92
2267 2412 3.306472 AGGCAGGTTTCCACAGTTTAA 57.694 42.857 0.00 0.00 0.00 1.52
2276 2421 2.124695 CCCGCTAGGCAGGTTTCC 60.125 66.667 0.00 0.00 35.76 3.13
2314 2461 1.147824 CTGGCTCTGGCTGGTATGG 59.852 63.158 0.00 0.00 38.73 2.74
2323 2470 1.280133 TCATTCAAGACCTGGCTCTGG 59.720 52.381 0.00 0.00 0.00 3.86
2324 2471 2.775911 TCATTCAAGACCTGGCTCTG 57.224 50.000 0.00 0.00 0.00 3.35
2326 2473 2.163211 GCTTTCATTCAAGACCTGGCTC 59.837 50.000 0.00 0.00 0.00 4.70
2334 2482 5.554070 TGATGAGTGAGCTTTCATTCAAGA 58.446 37.500 5.45 0.00 39.26 3.02
2357 2505 5.176741 ACAGAGAAGAAATGGAGCTTCAT 57.823 39.130 0.01 0.01 42.21 2.57
2358 2506 4.573900 GACAGAGAAGAAATGGAGCTTCA 58.426 43.478 0.00 0.00 42.21 3.02
2359 2507 3.616379 CGACAGAGAAGAAATGGAGCTTC 59.384 47.826 0.00 0.00 40.54 3.86
2383 2531 1.567746 CGTGCATGTGCTGTGCTGTA 61.568 55.000 6.55 0.00 42.92 2.74
2407 2573 1.804748 GGAAATCGGCAGAGAAACGTT 59.195 47.619 0.00 0.00 0.00 3.99
2431 2597 1.501741 CGCACACATACACAAGGCC 59.498 57.895 0.00 0.00 0.00 5.19
2432 2598 1.154225 GCGCACACATACACAAGGC 60.154 57.895 0.30 0.00 0.00 4.35
2433 2599 0.166597 CAGCGCACACATACACAAGG 59.833 55.000 11.47 0.00 0.00 3.61
2460 2626 3.388024 TCCTACCACCTGCTTATCACATC 59.612 47.826 0.00 0.00 0.00 3.06
2470 2636 1.078848 CACTGCTCCTACCACCTGC 60.079 63.158 0.00 0.00 0.00 4.85
2607 2773 7.439955 GTCCTTTTTGGTGGGTTGTTTTATAAG 59.560 37.037 0.00 0.00 37.07 1.73
2608 2774 7.125963 AGTCCTTTTTGGTGGGTTGTTTTATAA 59.874 33.333 0.00 0.00 37.07 0.98
2609 2775 6.612049 AGTCCTTTTTGGTGGGTTGTTTTATA 59.388 34.615 0.00 0.00 37.07 0.98
2611 2777 4.778427 AGTCCTTTTTGGTGGGTTGTTTTA 59.222 37.500 0.00 0.00 37.07 1.52
2614 2780 2.764010 GAGTCCTTTTTGGTGGGTTGTT 59.236 45.455 0.00 0.00 37.07 2.83
2616 2782 1.686587 GGAGTCCTTTTTGGTGGGTTG 59.313 52.381 0.41 0.00 37.07 3.77
2617 2783 1.412505 GGGAGTCCTTTTTGGTGGGTT 60.413 52.381 9.58 0.00 37.07 4.11
2619 2785 0.482887 AGGGAGTCCTTTTTGGTGGG 59.517 55.000 9.58 0.00 41.56 4.61
2660 2837 1.338020 ACTGTTTTGCTAAGCTGTGCC 59.662 47.619 6.49 0.00 0.00 5.01
2661 2838 2.781945 ACTGTTTTGCTAAGCTGTGC 57.218 45.000 6.49 4.45 0.00 4.57
2662 2839 4.319766 CCACTACTGTTTTGCTAAGCTGTG 60.320 45.833 14.74 9.30 31.20 3.66
2663 2840 3.815401 CCACTACTGTTTTGCTAAGCTGT 59.185 43.478 11.10 11.10 32.85 4.40
2664 2841 3.365364 GCCACTACTGTTTTGCTAAGCTG 60.365 47.826 0.00 0.93 0.00 4.24
2665 2842 2.814336 GCCACTACTGTTTTGCTAAGCT 59.186 45.455 0.00 0.00 0.00 3.74
2743 2920 3.090765 CCAACAGGGGAAGGGAGG 58.909 66.667 0.00 0.00 0.00 4.30
2764 2941 0.323451 ACGAGAAGGGAAAATGGCCC 60.323 55.000 0.00 0.00 46.40 5.80
2765 2942 0.811281 CACGAGAAGGGAAAATGGCC 59.189 55.000 0.00 0.00 0.00 5.36
2766 2943 1.534729 ACACGAGAAGGGAAAATGGC 58.465 50.000 0.00 0.00 0.00 4.40
2767 2944 3.555956 CGATACACGAGAAGGGAAAATGG 59.444 47.826 0.00 0.00 45.77 3.16
2768 2945 3.555956 CCGATACACGAGAAGGGAAAATG 59.444 47.826 0.00 0.00 45.77 2.32
2769 2946 3.431766 CCCGATACACGAGAAGGGAAAAT 60.432 47.826 0.00 0.00 45.77 1.82
2770 2947 2.093869 CCCGATACACGAGAAGGGAAAA 60.094 50.000 0.00 0.00 45.77 2.29
2825 3002 1.982073 GAAAGGAACGCATGGCTCCG 61.982 60.000 0.00 0.00 0.00 4.63
2826 3003 0.678048 AGAAAGGAACGCATGGCTCC 60.678 55.000 0.00 0.00 0.00 4.70
2827 3004 0.729690 GAGAAAGGAACGCATGGCTC 59.270 55.000 0.00 0.00 0.00 4.70
2849 3026 1.153939 CGAGAGAGGCGGACAGTTG 60.154 63.158 0.00 0.00 0.00 3.16
2928 3105 2.202797 CGAGTCCAGCATCCACGG 60.203 66.667 0.00 0.00 0.00 4.94
2993 3170 2.295349 GGCCATATTGAGCAATCCACAG 59.705 50.000 0.00 0.00 32.50 3.66
3050 3227 4.682320 GCCTTTTGTCGTCCCATACTGATA 60.682 45.833 0.00 0.00 0.00 2.15
3051 3228 3.873910 CCTTTTGTCGTCCCATACTGAT 58.126 45.455 0.00 0.00 0.00 2.90
3052 3229 2.614481 GCCTTTTGTCGTCCCATACTGA 60.614 50.000 0.00 0.00 0.00 3.41
3122 3305 8.994429 AATCAAAGTAGTATGTCAGACTCAAG 57.006 34.615 2.74 0.00 0.00 3.02
3162 3347 0.538287 GGGCTTGCTCTGGTGAACTT 60.538 55.000 0.00 0.00 0.00 2.66
3163 3348 1.073897 GGGCTTGCTCTGGTGAACT 59.926 57.895 0.00 0.00 0.00 3.01
3170 3355 2.182842 GTATGGCGGGCTTGCTCTG 61.183 63.158 2.38 0.00 34.52 3.35
3184 3369 5.684704 ACAGTTACAGGGGATCAATGTATG 58.315 41.667 0.00 0.12 30.03 2.39
3194 3388 1.209621 GGGCATACAGTTACAGGGGA 58.790 55.000 0.00 0.00 0.00 4.81
3212 3406 7.333174 GTCTCAGAATAGACAAAGAAAAGGAGG 59.667 40.741 0.00 0.00 44.41 4.30
3236 3431 0.176680 ACGATGAGCCATGGAGTGTC 59.823 55.000 18.40 6.41 0.00 3.67
3250 3445 3.459232 TCCTGCAGATTAGGAACGATG 57.541 47.619 17.39 0.00 41.24 3.84
3263 3458 1.597302 CATCGCCTCCATCCTGCAG 60.597 63.158 6.78 6.78 0.00 4.41
3277 3472 2.670414 GCCTTCTCTTGTGAAGACATCG 59.330 50.000 12.33 0.00 44.40 3.84
3476 3677 6.018832 GAGAATCAAACAGAGCTATCAGCTTC 60.019 42.308 1.60 0.00 44.13 3.86
3503 3704 2.997986 ACTTAAACGCTGTACATTCCCG 59.002 45.455 0.00 0.00 0.00 5.14
3546 3747 1.018226 CAGGCAAGAGACGAGCTTGG 61.018 60.000 5.79 0.00 42.23 3.61
3548 3749 1.375268 GCAGGCAAGAGACGAGCTT 60.375 57.895 0.00 0.00 0.00 3.74
3549 3750 2.264166 GCAGGCAAGAGACGAGCT 59.736 61.111 0.00 0.00 0.00 4.09
3550 3751 2.817396 GGCAGGCAAGAGACGAGC 60.817 66.667 0.00 0.00 0.00 5.03
3566 3767 0.664166 GCAAATGGTGTGTCTTGCGG 60.664 55.000 0.00 0.00 35.30 5.69
3571 3772 3.820557 ACACTTAGCAAATGGTGTGTCT 58.179 40.909 3.69 0.00 40.71 3.41
3573 3774 4.202111 GGAAACACTTAGCAAATGGTGTGT 60.202 41.667 0.00 3.69 41.26 3.72
3578 3779 4.215399 TCTTCGGAAACACTTAGCAAATGG 59.785 41.667 0.00 0.00 0.00 3.16
3589 3790 5.175859 TCCACTAATCATCTTCGGAAACAC 58.824 41.667 0.00 0.00 0.00 3.32
3595 3796 6.210078 GTTCTACTCCACTAATCATCTTCGG 58.790 44.000 0.00 0.00 0.00 4.30
3596 3797 5.910166 CGTTCTACTCCACTAATCATCTTCG 59.090 44.000 0.00 0.00 0.00 3.79
3599 3801 5.067936 CACCGTTCTACTCCACTAATCATCT 59.932 44.000 0.00 0.00 0.00 2.90
3604 3806 3.438183 ACCACCGTTCTACTCCACTAAT 58.562 45.455 0.00 0.00 0.00 1.73
3662 3864 2.287849 CCACACACACACACACACAAAA 60.288 45.455 0.00 0.00 0.00 2.44
3664 3866 0.877743 CCACACACACACACACACAA 59.122 50.000 0.00 0.00 0.00 3.33
3665 3867 0.957888 CCCACACACACACACACACA 60.958 55.000 0.00 0.00 0.00 3.72
3666 3868 0.675208 TCCCACACACACACACACAC 60.675 55.000 0.00 0.00 0.00 3.82
3667 3869 0.036875 TTCCCACACACACACACACA 59.963 50.000 0.00 0.00 0.00 3.72
3669 3871 1.029408 GCTTCCCACACACACACACA 61.029 55.000 0.00 0.00 0.00 3.72
3671 3873 0.463654 GAGCTTCCCACACACACACA 60.464 55.000 0.00 0.00 0.00 3.72
3672 3874 0.179045 AGAGCTTCCCACACACACAC 60.179 55.000 0.00 0.00 0.00 3.82
3674 3876 1.797025 GTAGAGCTTCCCACACACAC 58.203 55.000 0.00 0.00 0.00 3.82
3678 3880 1.927895 CATCGTAGAGCTTCCCACAC 58.072 55.000 0.00 0.00 43.63 3.82
3680 3882 0.872021 CGCATCGTAGAGCTTCCCAC 60.872 60.000 0.00 0.00 43.63 4.61
3682 3884 1.951631 GCGCATCGTAGAGCTTCCC 60.952 63.158 0.30 0.00 43.63 3.97
3683 3885 1.951631 GGCGCATCGTAGAGCTTCC 60.952 63.158 10.83 0.00 43.63 3.46
3687 3889 1.946650 GAGTGGCGCATCGTAGAGC 60.947 63.158 10.83 0.00 43.63 4.09
3688 3890 1.299468 GGAGTGGCGCATCGTAGAG 60.299 63.158 10.83 0.00 43.63 2.43
3689 3891 1.725557 GAGGAGTGGCGCATCGTAGA 61.726 60.000 10.83 0.00 45.75 2.59
3691 3893 1.725557 GAGAGGAGTGGCGCATCGTA 61.726 60.000 10.83 0.00 0.00 3.43
3693 3895 2.279120 GAGAGGAGTGGCGCATCG 60.279 66.667 10.83 0.00 0.00 3.84
3696 3898 3.749064 GTCGAGAGGAGTGGCGCA 61.749 66.667 10.83 0.00 0.00 6.09
3697 3899 4.500116 GGTCGAGAGGAGTGGCGC 62.500 72.222 0.00 0.00 0.00 6.53
3698 3900 3.062466 TGGTCGAGAGGAGTGGCG 61.062 66.667 0.00 0.00 0.00 5.69
3708 3967 1.613317 TACCAGCCCATGTGGTCGAG 61.613 60.000 9.60 0.00 45.74 4.04
3751 4010 3.283684 CCAAGCAACGGCCGAACA 61.284 61.111 35.90 0.00 42.56 3.18
3812 4071 2.357154 CCATACTCACCCCCTTTTCAGG 60.357 54.545 0.00 0.00 40.45 3.86
3846 4105 8.266682 GGAAAAATCGTAGCAAAGAAGAAAAAC 58.733 33.333 0.00 0.00 0.00 2.43
3875 4135 0.593128 CGGGGAAAAACTGCTCTGTG 59.407 55.000 0.00 0.00 0.00 3.66
3893 4153 0.579630 TGCGATAAATAGCAACCGCG 59.420 50.000 0.00 0.00 44.76 6.46
3910 4170 4.024556 ACTGCTATTACAATCGCTTGATGC 60.025 41.667 5.91 3.39 36.20 3.91
3911 4171 5.663795 ACTGCTATTACAATCGCTTGATG 57.336 39.130 5.91 0.00 36.20 3.07
3912 4172 6.683974 AAACTGCTATTACAATCGCTTGAT 57.316 33.333 5.91 0.00 36.20 2.57
3913 4173 6.494893 AAAACTGCTATTACAATCGCTTGA 57.505 33.333 5.91 0.00 36.20 3.02
3914 4174 5.449113 CGAAAACTGCTATTACAATCGCTTG 59.551 40.000 0.00 0.00 38.39 4.01
3915 4175 5.560148 CGAAAACTGCTATTACAATCGCTT 58.440 37.500 0.92 0.00 0.00 4.68
3916 4176 4.494199 GCGAAAACTGCTATTACAATCGCT 60.494 41.667 8.84 0.00 46.70 4.93
3917 4177 3.719352 GCGAAAACTGCTATTACAATCGC 59.281 43.478 0.00 0.00 44.80 4.58
3918 4178 5.143916 AGCGAAAACTGCTATTACAATCG 57.856 39.130 0.00 0.00 41.87 3.34
3919 4179 7.164335 GCTTAAGCGAAAACTGCTATTACAATC 59.836 37.037 12.53 0.00 43.14 2.67
3920 4180 6.967199 GCTTAAGCGAAAACTGCTATTACAAT 59.033 34.615 12.53 0.00 43.14 2.71
3921 4181 6.311723 GCTTAAGCGAAAACTGCTATTACAA 58.688 36.000 12.53 0.00 43.14 2.41
3922 4182 5.864986 GCTTAAGCGAAAACTGCTATTACA 58.135 37.500 12.53 0.00 43.14 2.41
3953 4213 2.171725 GCCCAATACGTCGTGAGGC 61.172 63.158 8.47 10.73 0.00 4.70
3954 4214 0.806102 CAGCCCAATACGTCGTGAGG 60.806 60.000 8.47 6.86 0.00 3.86
3955 4215 0.806102 CCAGCCCAATACGTCGTGAG 60.806 60.000 8.47 0.00 0.00 3.51
3956 4216 1.216977 CCAGCCCAATACGTCGTGA 59.783 57.895 8.47 0.00 0.00 4.35
3957 4217 2.461110 GCCAGCCCAATACGTCGTG 61.461 63.158 8.47 0.00 0.00 4.35
3958 4218 2.125269 GCCAGCCCAATACGTCGT 60.125 61.111 2.21 2.21 0.00 4.34
3959 4219 2.895372 GGCCAGCCCAATACGTCG 60.895 66.667 0.00 0.00 0.00 5.12
3969 4229 3.887868 CGCGTAAATGGGCCAGCC 61.888 66.667 13.78 0.00 0.00 4.85
3970 4230 4.552745 GCGCGTAAATGGGCCAGC 62.553 66.667 13.78 8.67 41.52 4.85
3971 4231 4.236416 CGCGCGTAAATGGGCCAG 62.236 66.667 24.19 0.00 44.19 4.85
3976 4236 2.982038 GAATGGGCGCGCGTAAATGG 62.982 60.000 32.35 0.92 0.00 3.16
3977 4237 1.654137 GAATGGGCGCGCGTAAATG 60.654 57.895 32.35 1.79 0.00 2.32
3978 4238 2.713154 GAATGGGCGCGCGTAAAT 59.287 55.556 32.35 18.65 0.00 1.40
3979 4239 3.855589 CGAATGGGCGCGCGTAAA 61.856 61.111 32.35 17.10 0.00 2.01
3981 4241 3.696664 TAACGAATGGGCGCGCGTA 62.697 57.895 32.35 17.09 35.74 4.42
3983 4243 4.568876 GTAACGAATGGGCGCGCG 62.569 66.667 28.44 28.44 33.86 6.86
3984 4244 2.515947 TTTGTAACGAATGGGCGCGC 62.516 55.000 25.94 25.94 33.86 6.86
3985 4245 0.110147 TTTTGTAACGAATGGGCGCG 60.110 50.000 0.00 0.00 33.86 6.86
3986 4246 1.333115 GTTTTGTAACGAATGGGCGC 58.667 50.000 0.00 0.00 33.86 6.53
3987 4247 2.580589 CTGTTTTGTAACGAATGGGCG 58.419 47.619 0.00 0.00 37.06 6.13
3988 4248 2.924880 GCCTGTTTTGTAACGAATGGGC 60.925 50.000 0.00 0.00 37.06 5.36
3989 4249 2.667171 CGCCTGTTTTGTAACGAATGGG 60.667 50.000 0.00 0.00 37.06 4.00
3990 4250 2.224549 TCGCCTGTTTTGTAACGAATGG 59.775 45.455 0.00 0.00 37.06 3.16
3991 4251 3.529634 TCGCCTGTTTTGTAACGAATG 57.470 42.857 0.00 0.00 37.06 2.67
3992 4252 3.562557 AGTTCGCCTGTTTTGTAACGAAT 59.437 39.130 0.00 0.00 41.00 3.34
3993 4253 2.937799 AGTTCGCCTGTTTTGTAACGAA 59.062 40.909 0.00 0.00 37.06 3.85
3994 4254 2.285756 CAGTTCGCCTGTTTTGTAACGA 59.714 45.455 0.00 0.00 37.06 3.85
3995 4255 2.635444 CAGTTCGCCTGTTTTGTAACG 58.365 47.619 0.00 0.00 37.06 3.18
3996 4256 2.032924 AGCAGTTCGCCTGTTTTGTAAC 59.967 45.455 4.24 0.00 43.55 2.50
3997 4257 2.294074 AGCAGTTCGCCTGTTTTGTAA 58.706 42.857 4.24 0.00 43.55 2.41
3998 4258 1.961793 AGCAGTTCGCCTGTTTTGTA 58.038 45.000 4.24 0.00 43.55 2.41
3999 4259 1.961793 TAGCAGTTCGCCTGTTTTGT 58.038 45.000 4.24 0.00 43.55 2.83
4000 4260 3.559238 AATAGCAGTTCGCCTGTTTTG 57.441 42.857 4.24 0.00 43.55 2.44
4001 4261 4.069304 TGTAATAGCAGTTCGCCTGTTTT 58.931 39.130 4.24 0.08 43.55 2.43
4002 4262 3.670625 TGTAATAGCAGTTCGCCTGTTT 58.329 40.909 4.24 0.35 43.55 2.83
4003 4263 3.328382 TGTAATAGCAGTTCGCCTGTT 57.672 42.857 4.24 1.14 43.55 3.16
4004 4264 3.328382 TTGTAATAGCAGTTCGCCTGT 57.672 42.857 4.24 0.00 43.55 4.00
4005 4265 3.623060 ACATTGTAATAGCAGTTCGCCTG 59.377 43.478 0.00 0.00 44.04 4.85
4006 4266 3.873910 ACATTGTAATAGCAGTTCGCCT 58.126 40.909 0.00 0.00 44.04 5.52
4007 4267 4.616181 AACATTGTAATAGCAGTTCGCC 57.384 40.909 0.00 0.00 44.04 5.54
4008 4268 5.286082 CCAAAACATTGTAATAGCAGTTCGC 59.714 40.000 0.00 0.00 42.91 4.70
4009 4269 5.799936 CCCAAAACATTGTAATAGCAGTTCG 59.200 40.000 0.00 0.00 0.00 3.95
4010 4270 5.576774 GCCCAAAACATTGTAATAGCAGTTC 59.423 40.000 0.00 0.00 0.00 3.01
4011 4271 5.245977 AGCCCAAAACATTGTAATAGCAGTT 59.754 36.000 0.00 0.00 0.00 3.16
4012 4272 4.772100 AGCCCAAAACATTGTAATAGCAGT 59.228 37.500 0.00 0.00 0.00 4.40
4013 4273 5.104374 CAGCCCAAAACATTGTAATAGCAG 58.896 41.667 0.00 0.00 0.00 4.24
4014 4274 4.769488 TCAGCCCAAAACATTGTAATAGCA 59.231 37.500 0.00 0.00 0.00 3.49
4015 4275 5.323371 TCAGCCCAAAACATTGTAATAGC 57.677 39.130 0.00 0.00 0.00 2.97
4016 4276 7.331687 CCTTTTCAGCCCAAAACATTGTAATAG 59.668 37.037 0.00 0.00 0.00 1.73
4017 4277 7.015682 TCCTTTTCAGCCCAAAACATTGTAATA 59.984 33.333 0.00 0.00 0.00 0.98
4018 4278 5.997129 CCTTTTCAGCCCAAAACATTGTAAT 59.003 36.000 0.00 0.00 0.00 1.89
4019 4279 5.129485 TCCTTTTCAGCCCAAAACATTGTAA 59.871 36.000 0.00 0.00 0.00 2.41
4020 4280 4.651503 TCCTTTTCAGCCCAAAACATTGTA 59.348 37.500 0.00 0.00 0.00 2.41
4021 4281 3.454082 TCCTTTTCAGCCCAAAACATTGT 59.546 39.130 0.00 0.00 0.00 2.71
4022 4282 4.060205 CTCCTTTTCAGCCCAAAACATTG 58.940 43.478 0.00 0.00 0.00 2.82
4023 4283 3.071457 CCTCCTTTTCAGCCCAAAACATT 59.929 43.478 0.00 0.00 0.00 2.71
4024 4284 2.634453 CCTCCTTTTCAGCCCAAAACAT 59.366 45.455 0.00 0.00 0.00 2.71
4025 4285 2.038659 CCTCCTTTTCAGCCCAAAACA 58.961 47.619 0.00 0.00 0.00 2.83
4026 4286 1.344438 CCCTCCTTTTCAGCCCAAAAC 59.656 52.381 0.00 0.00 0.00 2.43
4027 4287 1.219213 TCCCTCCTTTTCAGCCCAAAA 59.781 47.619 0.00 0.00 0.00 2.44
4028 4288 0.856982 TCCCTCCTTTTCAGCCCAAA 59.143 50.000 0.00 0.00 0.00 3.28
4029 4289 1.084018 ATCCCTCCTTTTCAGCCCAA 58.916 50.000 0.00 0.00 0.00 4.12
4030 4290 1.979809 TATCCCTCCTTTTCAGCCCA 58.020 50.000 0.00 0.00 0.00 5.36
4031 4291 3.382083 TTTATCCCTCCTTTTCAGCCC 57.618 47.619 0.00 0.00 0.00 5.19
4032 4292 3.447586 GGTTTTATCCCTCCTTTTCAGCC 59.552 47.826 0.00 0.00 0.00 4.85
4033 4293 3.447586 GGGTTTTATCCCTCCTTTTCAGC 59.552 47.826 0.00 0.00 43.85 4.26
4034 4294 3.694566 CGGGTTTTATCCCTCCTTTTCAG 59.305 47.826 0.25 0.00 44.95 3.02
4035 4295 3.562609 CCGGGTTTTATCCCTCCTTTTCA 60.563 47.826 0.00 0.00 44.95 2.69
4036 4296 3.021695 CCGGGTTTTATCCCTCCTTTTC 58.978 50.000 0.00 0.00 44.95 2.29
4037 4297 2.291996 CCCGGGTTTTATCCCTCCTTTT 60.292 50.000 14.18 0.00 44.95 2.27
4038 4298 1.286849 CCCGGGTTTTATCCCTCCTTT 59.713 52.381 14.18 0.00 44.95 3.11
4039 4299 0.924090 CCCGGGTTTTATCCCTCCTT 59.076 55.000 14.18 0.00 44.95 3.36
4040 4300 0.253488 ACCCGGGTTTTATCCCTCCT 60.253 55.000 24.16 0.00 44.95 3.69
4041 4301 0.182061 GACCCGGGTTTTATCCCTCC 59.818 60.000 30.89 6.75 44.95 4.30
4042 4302 0.913924 TGACCCGGGTTTTATCCCTC 59.086 55.000 30.89 12.25 44.95 4.30
4043 4303 1.493446 GATGACCCGGGTTTTATCCCT 59.507 52.381 30.89 6.39 44.95 4.20
4044 4304 1.213430 TGATGACCCGGGTTTTATCCC 59.787 52.381 30.89 13.92 43.78 3.85
4045 4305 2.572290 CTGATGACCCGGGTTTTATCC 58.428 52.381 30.89 14.75 0.00 2.59
4046 4306 1.947456 GCTGATGACCCGGGTTTTATC 59.053 52.381 30.89 28.30 0.00 1.75
4047 4307 1.745827 CGCTGATGACCCGGGTTTTAT 60.746 52.381 30.89 22.13 0.00 1.40
4048 4308 0.391927 CGCTGATGACCCGGGTTTTA 60.392 55.000 30.89 18.10 0.00 1.52
4049 4309 1.674322 CGCTGATGACCCGGGTTTT 60.674 57.895 30.89 18.89 0.00 2.43
4050 4310 2.046314 CGCTGATGACCCGGGTTT 60.046 61.111 30.89 19.31 0.00 3.27
4051 4311 3.000819 TCGCTGATGACCCGGGTT 61.001 61.111 30.89 13.92 0.00 4.11
4052 4312 3.461773 CTCGCTGATGACCCGGGT 61.462 66.667 30.81 30.81 0.00 5.28
4053 4313 4.227134 CCTCGCTGATGACCCGGG 62.227 72.222 22.25 22.25 0.00 5.73
4054 4314 4.227134 CCCTCGCTGATGACCCGG 62.227 72.222 0.00 0.00 0.00 5.73
4055 4315 4.899239 GCCCTCGCTGATGACCCG 62.899 72.222 0.00 0.00 0.00 5.28
4056 4316 4.899239 CGCCCTCGCTGATGACCC 62.899 72.222 0.00 0.00 0.00 4.46
4073 4333 3.350612 TTGGTTAGCGTGGCGTGC 61.351 61.111 0.00 0.00 0.00 5.34
4074 4334 2.554272 GTTGGTTAGCGTGGCGTG 59.446 61.111 0.00 0.00 0.00 5.34
4075 4335 3.039588 CGTTGGTTAGCGTGGCGT 61.040 61.111 0.00 0.00 0.00 5.68
4076 4336 3.007070 GACGTTGGTTAGCGTGGCG 62.007 63.158 0.00 0.00 43.92 5.69
4077 4337 2.674084 GGACGTTGGTTAGCGTGGC 61.674 63.158 0.00 0.00 43.92 5.01
4078 4338 2.030958 GGGACGTTGGTTAGCGTGG 61.031 63.158 0.00 0.00 43.92 4.94
4079 4339 3.557824 GGGACGTTGGTTAGCGTG 58.442 61.111 0.00 0.00 43.92 5.34
4102 4362 0.107557 ACGTCGGTGGAGTGGTTTTT 60.108 50.000 0.00 0.00 0.00 1.94
4103 4363 0.107557 AACGTCGGTGGAGTGGTTTT 60.108 50.000 0.00 0.00 0.00 2.43
4104 4364 0.531311 GAACGTCGGTGGAGTGGTTT 60.531 55.000 0.00 0.00 0.00 3.27
4105 4365 1.068585 GAACGTCGGTGGAGTGGTT 59.931 57.895 0.00 0.00 0.00 3.67
4106 4366 1.397390 AAGAACGTCGGTGGAGTGGT 61.397 55.000 0.00 0.00 0.00 4.16
4107 4367 0.249741 AAAGAACGTCGGTGGAGTGG 60.250 55.000 0.00 0.00 0.00 4.00
4108 4368 1.137513 GAAAGAACGTCGGTGGAGTG 58.862 55.000 0.00 0.00 0.00 3.51
4109 4369 0.748450 TGAAAGAACGTCGGTGGAGT 59.252 50.000 0.00 0.00 0.00 3.85
4110 4370 2.080286 ATGAAAGAACGTCGGTGGAG 57.920 50.000 0.00 0.00 0.00 3.86
4111 4371 2.224090 TGAATGAAAGAACGTCGGTGGA 60.224 45.455 0.00 0.00 0.00 4.02
4112 4372 2.139917 TGAATGAAAGAACGTCGGTGG 58.860 47.619 0.00 0.00 0.00 4.61
4113 4373 4.404507 AATGAATGAAAGAACGTCGGTG 57.595 40.909 0.00 0.00 0.00 4.94
4114 4374 5.432885 AAAATGAATGAAAGAACGTCGGT 57.567 34.783 0.00 0.00 0.00 4.69
4115 4375 5.387342 GCAAAAATGAATGAAAGAACGTCGG 60.387 40.000 0.00 0.00 0.00 4.79
4116 4376 5.172951 TGCAAAAATGAATGAAAGAACGTCG 59.827 36.000 0.00 0.00 0.00 5.12
4117 4377 6.509317 TGCAAAAATGAATGAAAGAACGTC 57.491 33.333 0.00 0.00 0.00 4.34
4118 4378 7.481275 AATGCAAAAATGAATGAAAGAACGT 57.519 28.000 0.00 0.00 0.00 3.99
4119 4379 8.675016 CAAAATGCAAAAATGAATGAAAGAACG 58.325 29.630 0.00 0.00 0.00 3.95
4120 4380 9.505995 ACAAAATGCAAAAATGAATGAAAGAAC 57.494 25.926 0.00 0.00 0.00 3.01
4191 4451 8.100164 AGGAGAAAAATGAGAACCAAACAAAAA 58.900 29.630 0.00 0.00 0.00 1.94
4192 4452 7.619965 AGGAGAAAAATGAGAACCAAACAAAA 58.380 30.769 0.00 0.00 0.00 2.44
4193 4453 7.181569 AGGAGAAAAATGAGAACCAAACAAA 57.818 32.000 0.00 0.00 0.00 2.83
4194 4454 6.183360 GGAGGAGAAAAATGAGAACCAAACAA 60.183 38.462 0.00 0.00 0.00 2.83
4195 4455 5.301805 GGAGGAGAAAAATGAGAACCAAACA 59.698 40.000 0.00 0.00 0.00 2.83
4196 4456 5.301805 TGGAGGAGAAAAATGAGAACCAAAC 59.698 40.000 0.00 0.00 0.00 2.93
4197 4457 5.454062 TGGAGGAGAAAAATGAGAACCAAA 58.546 37.500 0.00 0.00 0.00 3.28
4198 4458 5.060427 TGGAGGAGAAAAATGAGAACCAA 57.940 39.130 0.00 0.00 0.00 3.67
4199 4459 4.722526 TGGAGGAGAAAAATGAGAACCA 57.277 40.909 0.00 0.00 0.00 3.67
4200 4460 6.596309 AAATGGAGGAGAAAAATGAGAACC 57.404 37.500 0.00 0.00 0.00 3.62
4222 4482 6.366604 GGAGAAGAAAAACGAACCAACAAAAA 59.633 34.615 0.00 0.00 0.00 1.94
4223 4483 5.865013 GGAGAAGAAAAACGAACCAACAAAA 59.135 36.000 0.00 0.00 0.00 2.44
4224 4484 5.047943 TGGAGAAGAAAAACGAACCAACAAA 60.048 36.000 0.00 0.00 0.00 2.83
4225 4485 4.459685 TGGAGAAGAAAAACGAACCAACAA 59.540 37.500 0.00 0.00 0.00 2.83
4226 4486 4.011023 TGGAGAAGAAAAACGAACCAACA 58.989 39.130 0.00 0.00 0.00 3.33
4227 4487 4.348656 GTGGAGAAGAAAAACGAACCAAC 58.651 43.478 0.00 0.00 0.00 3.77
4228 4488 3.379057 GGTGGAGAAGAAAAACGAACCAA 59.621 43.478 0.00 0.00 0.00 3.67
4229 4489 2.946990 GGTGGAGAAGAAAAACGAACCA 59.053 45.455 0.00 0.00 0.00 3.67
4230 4490 3.211865 AGGTGGAGAAGAAAAACGAACC 58.788 45.455 0.00 0.00 0.00 3.62
4231 4491 4.895224 AAGGTGGAGAAGAAAAACGAAC 57.105 40.909 0.00 0.00 0.00 3.95
4232 4492 5.184287 ACAAAAGGTGGAGAAGAAAAACGAA 59.816 36.000 0.00 0.00 0.00 3.85
4233 4493 4.703093 ACAAAAGGTGGAGAAGAAAAACGA 59.297 37.500 0.00 0.00 0.00 3.85
4234 4494 4.993905 ACAAAAGGTGGAGAAGAAAAACG 58.006 39.130 0.00 0.00 0.00 3.60
4235 4495 7.667043 AAAACAAAAGGTGGAGAAGAAAAAC 57.333 32.000 0.00 0.00 0.00 2.43
4259 4519 9.413048 AGTGAAAACGAAAACAAACATAAGAAA 57.587 25.926 0.00 0.00 0.00 2.52
4260 4520 8.973835 AGTGAAAACGAAAACAAACATAAGAA 57.026 26.923 0.00 0.00 0.00 2.52
4261 4521 8.455682 AGAGTGAAAACGAAAACAAACATAAGA 58.544 29.630 0.00 0.00 0.00 2.10
4262 4522 8.614994 AGAGTGAAAACGAAAACAAACATAAG 57.385 30.769 0.00 0.00 0.00 1.73
4263 4523 9.493206 GTAGAGTGAAAACGAAAACAAACATAA 57.507 29.630 0.00 0.00 0.00 1.90
4264 4524 8.666573 TGTAGAGTGAAAACGAAAACAAACATA 58.333 29.630 0.00 0.00 0.00 2.29
4265 4525 7.531716 TGTAGAGTGAAAACGAAAACAAACAT 58.468 30.769 0.00 0.00 0.00 2.71
4266 4526 6.900189 TGTAGAGTGAAAACGAAAACAAACA 58.100 32.000 0.00 0.00 0.00 2.83
4267 4527 7.964545 ATGTAGAGTGAAAACGAAAACAAAC 57.035 32.000 0.00 0.00 0.00 2.93
4268 4528 8.973835 AAATGTAGAGTGAAAACGAAAACAAA 57.026 26.923 0.00 0.00 0.00 2.83
4269 4529 8.973835 AAAATGTAGAGTGAAAACGAAAACAA 57.026 26.923 0.00 0.00 0.00 2.83
4270 4530 8.855279 CAAAAATGTAGAGTGAAAACGAAAACA 58.145 29.630 0.00 0.00 0.00 2.83
4271 4531 8.856247 ACAAAAATGTAGAGTGAAAACGAAAAC 58.144 29.630 0.00 0.00 0.00 2.43
4272 4532 8.973835 ACAAAAATGTAGAGTGAAAACGAAAA 57.026 26.923 0.00 0.00 0.00 2.29
4274 4534 9.658475 CATACAAAAATGTAGAGTGAAAACGAA 57.342 29.630 0.00 0.00 0.00 3.85
4275 4535 8.832521 ACATACAAAAATGTAGAGTGAAAACGA 58.167 29.630 0.00 0.00 38.31 3.85
4276 4536 8.891928 CACATACAAAAATGTAGAGTGAAAACG 58.108 33.333 14.24 0.00 38.01 3.60
4277 4537 9.730420 ACACATACAAAAATGTAGAGTGAAAAC 57.270 29.630 21.13 0.00 38.01 2.43
4278 4538 9.944663 GACACATACAAAAATGTAGAGTGAAAA 57.055 29.630 21.13 0.00 38.01 2.29
4279 4539 9.114952 TGACACATACAAAAATGTAGAGTGAAA 57.885 29.630 21.13 11.67 38.01 2.69
4280 4540 8.669946 TGACACATACAAAAATGTAGAGTGAA 57.330 30.769 21.13 11.89 38.01 3.18
4281 4541 8.669946 TTGACACATACAAAAATGTAGAGTGA 57.330 30.769 21.13 6.54 38.01 3.41
4282 4542 9.729023 TTTTGACACATACAAAAATGTAGAGTG 57.271 29.630 16.30 16.30 41.90 3.51
4323 4583 8.999431 ACGTGTATAAAGAAAATGTTGATCACT 58.001 29.630 0.00 0.00 0.00 3.41
4324 4584 9.607285 AACGTGTATAAAGAAAATGTTGATCAC 57.393 29.630 0.00 0.00 0.00 3.06
4335 4595 9.881529 GGACAATGTTAAACGTGTATAAAGAAA 57.118 29.630 0.00 0.00 0.00 2.52
4336 4596 8.222433 CGGACAATGTTAAACGTGTATAAAGAA 58.778 33.333 0.00 0.00 0.00 2.52
4337 4597 7.598118 TCGGACAATGTTAAACGTGTATAAAGA 59.402 33.333 0.00 0.00 0.00 2.52
4338 4598 7.731720 TCGGACAATGTTAAACGTGTATAAAG 58.268 34.615 0.00 0.00 0.00 1.85
4339 4599 7.649370 TCGGACAATGTTAAACGTGTATAAA 57.351 32.000 0.00 0.00 0.00 1.40
4340 4600 7.649370 TTCGGACAATGTTAAACGTGTATAA 57.351 32.000 0.00 0.00 0.00 0.98
4341 4601 7.674472 GCATTCGGACAATGTTAAACGTGTATA 60.674 37.037 0.00 0.00 0.00 1.47
4342 4602 6.539324 CATTCGGACAATGTTAAACGTGTAT 58.461 36.000 0.00 0.00 0.00 2.29
4343 4603 5.615106 GCATTCGGACAATGTTAAACGTGTA 60.615 40.000 0.00 0.00 0.00 2.90
4344 4604 4.778904 CATTCGGACAATGTTAAACGTGT 58.221 39.130 0.00 0.00 0.00 4.49
4345 4605 3.602062 GCATTCGGACAATGTTAAACGTG 59.398 43.478 0.00 0.00 0.00 4.49
4346 4606 3.500680 AGCATTCGGACAATGTTAAACGT 59.499 39.130 0.00 0.00 0.00 3.99
4347 4607 4.078363 AGCATTCGGACAATGTTAAACG 57.922 40.909 0.00 0.00 0.00 3.60
4348 4608 9.730420 ATTATAAGCATTCGGACAATGTTAAAC 57.270 29.630 0.00 0.00 0.00 2.01
4349 4609 9.944663 GATTATAAGCATTCGGACAATGTTAAA 57.055 29.630 0.00 0.00 0.00 1.52
4350 4610 8.279800 CGATTATAAGCATTCGGACAATGTTAA 58.720 33.333 1.10 0.00 0.00 2.01
4351 4611 7.439955 ACGATTATAAGCATTCGGACAATGTTA 59.560 33.333 10.12 0.00 35.98 2.41
4352 4612 6.260050 ACGATTATAAGCATTCGGACAATGTT 59.740 34.615 10.12 0.00 35.98 2.71
4353 4613 5.758296 ACGATTATAAGCATTCGGACAATGT 59.242 36.000 10.12 0.00 35.98 2.71
4354 4614 6.228273 ACGATTATAAGCATTCGGACAATG 57.772 37.500 10.12 0.00 35.98 2.82
4355 4615 6.861065 AACGATTATAAGCATTCGGACAAT 57.139 33.333 10.12 0.00 35.98 2.71
4356 4616 7.773864 TTAACGATTATAAGCATTCGGACAA 57.226 32.000 10.12 0.51 35.98 3.18
4357 4617 7.773864 TTTAACGATTATAAGCATTCGGACA 57.226 32.000 10.12 0.00 35.98 4.02
4380 4640 4.515567 CCTTCTCTTAGTTCGCCTGTTTTT 59.484 41.667 0.00 0.00 0.00 1.94
4381 4641 4.065789 CCTTCTCTTAGTTCGCCTGTTTT 58.934 43.478 0.00 0.00 0.00 2.43
4382 4642 3.323979 TCCTTCTCTTAGTTCGCCTGTTT 59.676 43.478 0.00 0.00 0.00 2.83
4383 4643 2.897969 TCCTTCTCTTAGTTCGCCTGTT 59.102 45.455 0.00 0.00 0.00 3.16
4384 4644 2.494073 CTCCTTCTCTTAGTTCGCCTGT 59.506 50.000 0.00 0.00 0.00 4.00
4385 4645 2.159170 CCTCCTTCTCTTAGTTCGCCTG 60.159 54.545 0.00 0.00 0.00 4.85
4386 4646 2.104170 CCTCCTTCTCTTAGTTCGCCT 58.896 52.381 0.00 0.00 0.00 5.52
4387 4647 1.137282 CCCTCCTTCTCTTAGTTCGCC 59.863 57.143 0.00 0.00 0.00 5.54
4388 4648 2.100989 TCCCTCCTTCTCTTAGTTCGC 58.899 52.381 0.00 0.00 0.00 4.70
4389 4649 5.378332 TCTATCCCTCCTTCTCTTAGTTCG 58.622 45.833 0.00 0.00 0.00 3.95
4390 4650 6.041182 GGTTCTATCCCTCCTTCTCTTAGTTC 59.959 46.154 0.00 0.00 0.00 3.01
4391 4651 5.900699 GGTTCTATCCCTCCTTCTCTTAGTT 59.099 44.000 0.00 0.00 0.00 2.24
4392 4652 5.460416 GGTTCTATCCCTCCTTCTCTTAGT 58.540 45.833 0.00 0.00 0.00 2.24
4393 4653 4.836175 GGGTTCTATCCCTCCTTCTCTTAG 59.164 50.000 0.00 0.00 43.85 2.18
4394 4654 4.691935 CGGGTTCTATCCCTCCTTCTCTTA 60.692 50.000 0.25 0.00 44.95 2.10
4395 4655 3.659841 GGGTTCTATCCCTCCTTCTCTT 58.340 50.000 0.00 0.00 43.85 2.85
4396 4656 2.425102 CGGGTTCTATCCCTCCTTCTCT 60.425 54.545 0.25 0.00 44.95 3.10
4397 4657 1.964933 CGGGTTCTATCCCTCCTTCTC 59.035 57.143 0.25 0.00 44.95 2.87
4398 4658 1.413227 CCGGGTTCTATCCCTCCTTCT 60.413 57.143 0.00 0.00 44.95 2.85
4399 4659 1.049402 CCGGGTTCTATCCCTCCTTC 58.951 60.000 0.00 0.00 44.95 3.46
4400 4660 0.400093 CCCGGGTTCTATCCCTCCTT 60.400 60.000 14.18 0.00 44.95 3.36
4401 4661 1.236282 CCCGGGTTCTATCCCTCCT 59.764 63.158 14.18 0.00 44.95 3.69
4402 4662 1.074699 ACCCGGGTTCTATCCCTCC 60.075 63.158 24.16 0.00 44.95 4.30
4403 4663 0.398098 TGACCCGGGTTCTATCCCTC 60.398 60.000 30.89 12.25 44.95 4.30
4404 4664 0.267960 ATGACCCGGGTTCTATCCCT 59.732 55.000 30.89 3.29 44.95 4.20
4405 4665 0.685660 GATGACCCGGGTTCTATCCC 59.314 60.000 30.89 13.92 43.78 3.85
4406 4666 1.344763 CTGATGACCCGGGTTCTATCC 59.655 57.143 30.89 14.75 0.00 2.59
4407 4667 1.270358 GCTGATGACCCGGGTTCTATC 60.270 57.143 30.89 28.30 0.00 2.08
4408 4668 0.759346 GCTGATGACCCGGGTTCTAT 59.241 55.000 30.89 22.13 0.00 1.98
4409 4669 1.672854 CGCTGATGACCCGGGTTCTA 61.673 60.000 30.89 18.10 0.00 2.10
4410 4670 2.990479 GCTGATGACCCGGGTTCT 59.010 61.111 30.89 18.70 0.00 3.01
4411 4671 2.511600 CGCTGATGACCCGGGTTC 60.512 66.667 30.89 23.13 0.00 3.62
4412 4672 3.000819 TCGCTGATGACCCGGGTT 61.001 61.111 30.89 13.92 0.00 4.11
4413 4673 3.461773 CTCGCTGATGACCCGGGT 61.462 66.667 30.81 30.81 0.00 5.28
4414 4674 4.227134 CCTCGCTGATGACCCGGG 62.227 72.222 22.25 22.25 0.00 5.73
4415 4675 4.227134 CCCTCGCTGATGACCCGG 62.227 72.222 0.00 0.00 0.00 5.73
4416 4676 4.899239 GCCCTCGCTGATGACCCG 62.899 72.222 0.00 0.00 0.00 5.28
4417 4677 4.899239 CGCCCTCGCTGATGACCC 62.899 72.222 0.00 0.00 0.00 4.46
4439 4699 1.741770 GGTGGAGTGGTTAGCGCAG 60.742 63.158 11.47 0.00 0.00 5.18
4440 4700 2.345991 GGTGGAGTGGTTAGCGCA 59.654 61.111 11.47 0.00 0.00 6.09
4441 4701 2.813908 CGGTGGAGTGGTTAGCGC 60.814 66.667 0.00 0.00 0.00 5.92
4442 4702 1.445582 GTCGGTGGAGTGGTTAGCG 60.446 63.158 0.00 0.00 36.73 4.26
4443 4703 1.445582 CGTCGGTGGAGTGGTTAGC 60.446 63.158 0.00 0.00 0.00 3.09
4444 4704 1.131883 CTACGTCGGTGGAGTGGTTAG 59.868 57.143 0.00 0.00 0.00 2.34
4445 4705 1.167851 CTACGTCGGTGGAGTGGTTA 58.832 55.000 0.00 0.00 0.00 2.85
4446 4706 1.530013 CCTACGTCGGTGGAGTGGTT 61.530 60.000 0.00 0.00 0.00 3.67
4447 4707 1.975407 CCTACGTCGGTGGAGTGGT 60.975 63.158 0.00 0.00 0.00 4.16
4448 4708 2.707849 CCCTACGTCGGTGGAGTGG 61.708 68.421 5.28 0.00 0.00 4.00
4449 4709 2.707849 CCCCTACGTCGGTGGAGTG 61.708 68.421 5.28 0.00 0.00 3.51
4450 4710 2.362120 CCCCTACGTCGGTGGAGT 60.362 66.667 5.28 0.00 0.00 3.85
4451 4711 3.834799 GCCCCTACGTCGGTGGAG 61.835 72.222 15.06 0.00 0.00 3.86
4459 4719 2.751436 TAAGACGCGCCCCTACGT 60.751 61.111 5.73 0.00 46.91 3.57
4460 4720 2.275547 AAGTAAGACGCGCCCCTACG 62.276 60.000 5.73 0.00 0.00 3.51
4461 4721 0.804933 CAAGTAAGACGCGCCCCTAC 60.805 60.000 5.73 2.70 0.00 3.18
4462 4722 0.966875 TCAAGTAAGACGCGCCCCTA 60.967 55.000 5.73 0.00 0.00 3.53
4463 4723 2.227089 CTCAAGTAAGACGCGCCCCT 62.227 60.000 5.73 0.00 0.00 4.79
4464 4724 1.810030 CTCAAGTAAGACGCGCCCC 60.810 63.158 5.73 0.00 0.00 5.80
4465 4725 1.810030 CCTCAAGTAAGACGCGCCC 60.810 63.158 5.73 0.00 0.00 6.13
4466 4726 2.453638 GCCTCAAGTAAGACGCGCC 61.454 63.158 5.73 0.00 0.00 6.53
4467 4727 2.453638 GGCCTCAAGTAAGACGCGC 61.454 63.158 5.73 0.00 0.00 6.86
4468 4728 1.080093 TGGCCTCAAGTAAGACGCG 60.080 57.895 3.53 3.53 0.00 6.01
4469 4729 0.037232 AGTGGCCTCAAGTAAGACGC 60.037 55.000 3.32 0.00 0.00 5.19
4470 4730 1.404315 GGAGTGGCCTCAAGTAAGACG 60.404 57.143 3.32 0.00 39.64 4.18
4471 4731 1.623811 TGGAGTGGCCTCAAGTAAGAC 59.376 52.381 3.32 0.00 39.64 3.01
4472 4732 1.902508 CTGGAGTGGCCTCAAGTAAGA 59.097 52.381 3.32 0.00 39.64 2.10
4473 4733 1.677217 GCTGGAGTGGCCTCAAGTAAG 60.677 57.143 3.32 0.00 40.44 2.34
4474 4734 0.324943 GCTGGAGTGGCCTCAAGTAA 59.675 55.000 3.32 0.00 40.44 2.24
4475 4735 1.553690 GGCTGGAGTGGCCTCAAGTA 61.554 60.000 3.32 0.00 45.57 2.24
4476 4736 2.753029 GCTGGAGTGGCCTCAAGT 59.247 61.111 3.32 0.00 40.44 3.16
4477 4737 2.045536 GGCTGGAGTGGCCTCAAG 60.046 66.667 3.32 0.00 45.57 3.02
4478 4738 4.020617 CGGCTGGAGTGGCCTCAA 62.021 66.667 3.32 0.00 46.73 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.