>input_sequence_31936
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------------------------------ATGGACAAGGAGGAGCAGGAAGGCCGCGCGACGTGGGTCCCCGGCGCCCT
CGTCGTCGGCGCGGGCCCGTCGGGGCTCGCCGCGGCCGCGTGCCTCGCGGCTCGCGGCGTGCCGGCCACGGTGCTCGAGA
GGTCCGACTCGCTGGCCTTCACGTGGCGCCACCGCATGTACGACCGCCTCGCGCTCCACCTGCCCAAGCGCTTCTGCGAG
CTGCCGCTCCTCCCGTTCCCGGCCGACTACCCGACCTACCCCTGCAAGGACCAGTTCGTGGCGTACATGGAGGCGTACGC
CGCCGCGGCGGGCGTGGCCCCTCGCTTCGGCGCCAGCGTCCAGGAGGCCGCGTTCGACGCGTCCGCGGGCGCCTGGGCGG
TGCGCCTGGCGGGCGGCGAGGTGCTGATGACGAGGTGGCTCGTGGTGGCGACGGGCGAGAACGCGGAGCCGCACGTCCCG
GACTTCCCCGGCATGCGGCAGTTCGCCGGGCGCGTCCTGCACACGTGCGAGTACAAGTGCGGCGAGGAGTTCGCCGGGGA
GAAGGTGTTGGTGGTGGGGTGCGGGAACTCCGGCATGGAGGTGAGCCTGGATTTGTGCCGGCACGGCGCTAAGCCCTCCA
TGGTGGTGCGGAACACGGTAATAGATACTACTACAATCACAATCACAATGAGCTCTTGCTACATATACCT----AAGATT
GTGCTGTTAGGATCCGTCCTCTC-TTCTTGCTGCCTTTTGTTTGTTTTCTGTTGTAGTTCGTGCAATTATG-TTGACTCT
GCTCCTCTTTGGTGCCCTTAACTTCTTTGGCATTTCCCCTTCGGTGCCTAGCCTATCTT---------------------
--CTTGCTGCCATCTTTCATGACAAGCATGTTCCAATCTGCATGGGCGCTGTTGTTGATCCGTTTTGTTTCCCTTCCCTT
TTGCTTCAACAAACTATTTATGCCCGCCCGTTTC--------------------------ATTCACGCTAAAACTAACAA
GCAGTCACCGTAAAATAAAATTGTACAGGTCCATGTGCTGCCAAAGGAGATGCTGGGTGTGTCCACGTTTGGCATTGCCA
TGGCTCTGCTCAAATGGCTGCCGGTCCAGTTGGTGGATCGATTCATCCTGGCGGCGGCGCGCTTGACCCTCGGCAACACG
AGCCAGCTCGGGCTAAGACGGCCCAAGACGGGGCCCATCGAGCTGAAGAACCTCACCGGCAGAACCCCCGTGCTGGACGT
CGGGACTCTAGACCACATCAAATCAGGCAAAATTAAGGTTGGTTA------------------GCTCCACCAACGA-TAA
TTGAGATTGGCTTAAACTGTGGAAACCTGCCTA--GCGGGCCACCGCCCAATCTGGCATACCATACCAGCCAG-AGCCAG
GTCTTGAATGAAAGCTCACTCATCATGAAGCTCCATTTCTTCTCTGTCGCTACAG---CACA---------------GCA
CATGCACGCCTTAACGTTTCTCTGCCGATTTCCTATGGCCTTGTGTATGTGTGCGCTGATGAGGTGATGTGATAAGCAGG
TGGTAGGAGCAGTGAAGGAGGTGACGAGGGTCGGGGCCAGGCTCGCGGACGGCAAGGAGGAGCAGCAGTTCGACGCAATA
ATACTGGCGACGGGCTACAGGAGCAACGTGCCGTCCTGGCTCAAGGTAAATACTTATAAAACAAC-----------CCAC
CAAAAAGGACTCCCTTGTTCGTTTTTGGTCTGCACAGGCACAGCTTAGCAAAACAGTAGTGGCACAGTGCGCGTCATGCC
GTCACCTTGCCCTGCGTCCCCGCGTCACGGCCGTCCTCCCCTCCCTTCCCCTGTTGGGTTGGGCCATTTTCCCTTCTCGT
GTATCGGGGGCGGGCAGGGGCAGCTCGTGCCCTCGCCTGCGCGGAGCCATGCGTTCCTTTCTCCCCAACTGTCCGCCTCT
CTCGCGCCAAGTGATCGAGTCAGTGACTCACCCTGGGCATGGGCATGGGCATGGCCGCCCACCGCCGTGGATGCTGGACT
CGAGACTTTGGATATACGCTTGCGTTGCGTCGGCCCGGTCACTCCATACCTGTGGATTGCTCAATATGGCCATCTAATCT
ATATGGTCTATTTCGGGTGCTAGTATTATCAGTATGGGACGACAAAAGGCTATCCAAAC---TACATATAGTCAAGA--T
GGCAAGAAAGGTAGTGC-TACTTGCTTGAGTCTGACATACTACTTT--GATTTTACCCCATTATAAAAGTTCACCAGAGC
AAGCCCGCCATACATTG---------ATCCCCTGTAACTGTATGCCCTCCTTTTC-TTTGTCTATTCTGAGACACTCCAT
GGCTCATCGTTCCTAATCTGCAGGATGGAGGCGATGTCTTCACAAGAGAAGGCACGCCCAAAACCCCTTTCCCCGACGGC
TGGAAAGGGCGAAACGGCCTCTACACCGTCGGATTCTCGCAGCGAGGGCTCCTCGGAGCATCGTCAGACGCCCTATGCGT
CGCCAGAGATATACATTGCCAATGGAGGGAAAGAGAAAGAGAA------AGAGATAAACCCACTAGCGATGTGCACGAAG
CTGATAGCTCTGTTTGA---------------------------------------------------------------
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>chr3A_1_TraesCS3A01G232600
CCTGTGCAGCGAGCGAATCCTCGTCCTAGGCGGAGTAGGAAGATTGTGACGAGCAGCGGGGGCTTCA-----TATCATAT
CGTAATAAATATTTGCAGCGAGCCTGACTTGTGACAACTGTAGCTTGTGGGCGATTCCTCGCCCATCATTTTGAACTCGA
TCGCTCCGAGTTGACTCGTACCACCAGTCCACCAACTTACACCATCGACTGCCGCTTTGCCTCTTTGGGCATTGGACTAC
TGATTAATCCTCGTCAACGTCATTGATTTATACGTAGCTAGCTAGTGCTACATCCTTCACG---TGGAAGTAGAACCACA
GGCAGAGGGAGGAAGCAAATGCTCTGAGTCTCCGTGTTGAAACCGCTGGAACACCCTGAGCTGCTTTTGGTGTGACCGGC
TGGAATTGCTCTGCCACTCCTCATGTGCACATCACACTTAGCCCTCTCGCTGTCCAAACTCCTGCTTGCATCCACCGAAA
AATAGATACTCCTATTTCATAC-GTATTCGTTTGTAGAGAGTATATAATCATACTACTCCAGTTCCTGGAAAACAGGATG
CTCCCAAGCTCCCATCAAAGGTCACTATTGCCCATGATCTCTGGATTGTTGCTGTTGGGTTCCGATCAGAACAGAGTGGT
CTTGCGTTATTAACAGAGATAAGCCAAATTTACAACCAAGGACAAAGACCC---GGTAATTCCCACCTACATCTACCGAG
GGCAGCGTGGACCACGTACGCACGGTCCATGATATCGTCAAGTGACAGACACCTTCAAGTCTTCAAGTTCCATTTTTCCT
TTTTG-----------------------------CATTCGGGTTCAAGCA--------------------AAGGAAATAC
GAGCTTCCAAAGCTGCTAGGCGTACGCCCGCCTGCGAGTCTCCAAGCTCCTGCCGATGAAG--------GCCCTCGCCAA
AACCCCTATAAAACCCCTTGCACAGTATAAAACACACCTCCAC-TCCACAGTAAAAACCCACGCCCACAGGCAAGCAGAG
GCCCCAGGACCGATCGCAGCAGCCAGTGCCATGGACAAGGAGGAGCAGGAAGGCCGCGCGACGTGGGTCCCCGGCGCCCT
CGTCGTCGGCGCGGGCCCGTCGGGGCTCGCCGCGGCCGCGTGCCTCGCGGCTCGCGGCGTGCCGGCCACGGTGCTCGAGA
GGTCCGACTCGCTGGCCTTCACGTGGCGCCACCGCATGTACGACCGCCTCGCGCTCCACCTGCCCAAGCGCTTCTGCGAG
CTGCCGCTCCTCCCGTTCCCGGCCGACTACCCGACCTACCCCTGCAAGGACCAGTTCGTGGCGTACATGGAGGCGTACGC
CGCCGCGGCGGGCGTGGCCCCTCGCTTCGGCGCCAGCGTCCAGGAGGCCGCGTTCGACGCGTCCGCGGGCGCCTGGGCGG
TGCGCCTGGCGGGCGGCGAGGTGCTGATGACGAGGTGGCTCGTGGTGGCGACGGGCGAGAACGCGGAGCCGCACGTCCCG
GACTTCCCCGGCATGCGGCAGTTCGCCGGGCGCGTCCTGCACACGTGCGAGTACAAGTGCGGCGAGGAGTTCGCCGGGGA
GAAGGTGTTGGTGGTGGGGTGCGGGAACTCCGGCATGGAGGTGAGCCTGGATTTGTGCCGGCACGGCGCTAAGCCCTCCA
TGGTGGTGCGGAACACGGTAATAGATACTACTACAATCACAATCACAATGAGCTCTTGCTACATATACCT----AAGATT
GTGCTGTTAGGATCCGTCCTCTC-TTCTTGCTGCCTTTTGTTTGTTTTCTGTTGTAGTTCGTGCAATTATG-TTGACTCT
GCTCCTCTTTGGTGCCCTTAACTTCTTTGGCATTTCCCCTTCGGTGCCTAGCCTATCTT---------------------
--CTTGCTGCCATCTTTCATGACAAGCATGTTCCAATCTGCATGGGCGCTGTTGTTGATCCGTTTTGTTTCCCTTCCCTT
TTGCTTCAACAAACTATTTATGCCCGCCCGTTTC--------------------------ATTCACGCTAAAACTAACAA
GCAGTCACCGTAAAATAAAATTGTACAGGTCCATGTGCTGCCAAAGGAGATGCTGGGTGTGTCCACGTTTGGCATTGCCA
TGGCTCTGCTCAAATGGCTGCCGGTCCAGTTGGTGGATCGATTCATCCTGGCGGCGGCGCGCTTGACCCTCGGCAACACG
AGCCAGCTCGGGCTAAGACGGCCCAAGACGGGGCCCATCGAGCTGAAGAACCTCACCGGCAGAACCCCCGTGCTGGACGT
CGGGACTCTAGACCACATCAAATCAGGCAAAATTAAGGTTGGTTA------------------GCTCCACCAACGA-TAA
TTGAGATTGGCTTAAACTGTGGAAACCTGCCTA--GCGGGCCACCGCCCAATCTGGCATACCATACCAGCCAG-AGCCAG
GTCTTGAATGAAAGCTCACTCATCATGAAGCTCCATTTCTTCTCTGTCGCTACAG---CACA---------------GCA
CATGCACGCCTTAACGTTTCTCTGCCGATTTCCTATGGCCTTGTGTATGTGTGCGCTGATGAGGTGATGTGATAAGCAGG
TGGTAGGAGCAGTGAAGGAGGTGACGAGGGTCGGGGCCAGGCTCGCGGACGGCAAGGAGGAGCAGCAGTTCGACGCAATA
ATACTGGCGACGGGCTACAGGAGCAACGTGCCGTCCTGGCTCAAGGTAAATACTTATAAAACAAC-----------CCAC
CAAAAAGGACTCCCTTGTTCGTTTTTGGTCTGCACAGGCACAGCTTAGCAAAACAGTAGTGGCACAGTGCGCGTCATGCC
GTCACCTTGCCCTGCGTCCCCGCGTCACGGCCGTCCTCCCCTCCCTTCCCCTGTTGGGTTGGGCCATTTTCCCTTCTCGT
GTATCGGGGGCGGGCAGGGGCAGCTCGTGCCCTCGCCTGCGCGGAGCCATGCGTTCCTTTCTCCCCAACTGTCCGCCTCT
CTCGCGCCAAGTGATCGAGTCAGTGACTCACCCTGGGCATGGGCATGGGCATGGCCGCCCACCGCCGTGGATGCTGGACT
CGAGACTTTGGATATACGCTTGCGTTGCGTCGGCCCGGTCACTCCATACCTGTGGATTGCTCAATATGGCCATCTAATCT
ATATGGTCTATTTCGGGTGCTAGTATTATCAGTATGGGACGACAAAAGGCTATCCAAAC---TACATATAGTCAAGA--T
GGCAAGAAAGGTAGTGC-TACTTGCTTGAGTCTGACATACTACTTT--GATTTTACCCCATTATAAAAGTTCACCAGAGC
AAGCCCGCCATACATTG---------ATCCCCTGTAACTGTATGCCCTCCTTTTC-TTTGTCTATTCTGAGACACTCCAT
GGCTCATCGTTCCTAATCTGCAGGATGGAGGCGATGTCTTCACAAGAGAAGGCACGCCCAAAACCCCTTTCCCCGACGGC
TGGAAAGGGCGAAACGGCCTCTACACCGTCGGATTCTCGCAGCGAGGGCTCCTCGGAGCATCGTCAGACGCCCTATGCGT
CGCCAGAGATATACATTGCCAATGGAGGGAAAGAGAAAGAGAA------AGAGATAAACCCACTAGCGATGTGCACGAAG
CTGATAGCTCTGTTTGATTCTCACGGGAATGTACAGCGTTTAAGTAGGAGTTTTGTGCATATAACACCAAGCTCGTCTCT
TGCCTGCCGCAAGACACACCATTTGCTAAGTGTTTCC-GAAGATGATTAGTGGAGTAGAACGGTGGTATGTGTAACGTGT
CCCTATAGCACGCAAGCCAGCTTTTTTGTGTGTGTGTGTGTGTGGGAAGCTCTACGATGC--------------------
-------------------------------------GCCACTCCTCTCGACCACATGGGCTGGTAGCCCAGGGATCCAG
CCTGAGGCCTGTTCGGCCGTTGCTTGGACCAGGTGTTGTTAGCCCAATTCGGTGGGGGAAGAAAGGCTGGCCTGAAAAGG
GGGTGAGTATGGGCTGTAGGCCTAG-TTTTTCTTCTTTGCTACGATTTTTCCAACACAGAGCAGTTTTTCCCCGCGGTTG
CTATTTATCGCATCAAGCGATTGTAATAGCAGTTTTCGCTTAAGCGTTTCCCGCCTCACGACGTATTGGGCTGGCCCATT
TACGCGCGCCCATTCGTTACAAAACAGGCGAACTGCTATTACAATGTTTTGGGCTGAAAAGGAGGGATAAAACCCGGGTC
ATCAGCGAGGGCGCACGCCACGCTAACCAACGTCCCGTCAAAAAAACCACTCCACCGACGTTCTTTCATTCATTTTTGCA
TTTTGTTTTTATTTGGTTATTATATGTTCATTTTTTGCATTATTCTATTTTTTTTGTTTGGTTCTCATTTTTCTCCTCCA
TTTTTTGTTGGTTCGTTTTTCTTCTCCACCTTTTGTTTTTTCTTATGTTTGTTTTCGTTTTCACTCTACATTTTTGTATG
TGTCAAAATCATTTTTTTAGTTAGTGATCAACATTTTCTTTATACACGTTTAACATTGTCCGAATGCTTATAATCGTTAA
AAAACAGGCGAACTAAGAGAAGGAGGGATAGAACCCGGGTCATCAGCGAGGGCGCACGCTGCGCTAACCACTCCACCGAC
GTAGGGGCGCGTCTTACTTGAGGCCACTCCAGCCGT
>chr3B_3
--TGTGCAGCGTGCGAATCCTCGTCCTAGGCGGAGTAGGAAGATTGTGACGAGCAGCGGGGGCTTCA-----TATCATA-
----ATAAATATTTGCAGCGAGCCTGACTTGTGACAACTGTAGCTTGTAGGGGATTCC-CGCCCATCATTTTGAACTCGA
TCTCTCCGAGTTGACTTGTACCACCAGTCCA-CAACTTACACCATCGACTGCC-CTTTGCATCTTTGGCCATTGGACTAC
CAATTAATCCTCGCCAACGTCATTGATTTATA----GCTAGCTAGTGCTACATCCTTCACG---TAGAAGTAGAACCACA
AGCAGAGGGAGGAAGCAAATGCTCTGAGTCTCCGTGTTGAAACCGCTGGAACACCCTGAGCTGCTTTTGGTGTGACCGCC
TGGAATTGCTCTGCCACTCCTCATGTGCACATCACACTTAGCCCTATCGCTGTCCAAACTACTGCTTGCATCCACAAAAA
AATAGATACTCTTATTTCATACTGTATTTATTTGTAGAGAGTATATAATCATACTACTCCAGTTCCTGGAAAACAGGATG
CTCCCAAGCTCCCATCAAAGGTCACTATTGCCCATGATCTCTGGATTGTTGCTGTTGGGTTCCAGTCGGT-CAGAGTAAT
CTTGCGTTATTAACAGAGACAAGCCAAATTTACAACCAAGGACAAATACCAGGTGGTAACTCCCACCTACATCTACCGTG
GT-AGCGTGGACCTCGTACGCACGGCCTATGATATCGTCAAGTGACAGACACCTTCAAGTCTTCAAGTTCCATTTTTCCT
TTTTGCGTGGTATACGAAAGAAAAAAAAAATCCACGTTCGGGTTCAAGGGCTTTTAAACAGAGCAAGGAAATACTGC-AC
GAGCTTCCAAAGCTGCTAGGCGTACTCCCGCCCGCGAGTCTCCAAGCTCCTGCGGATGAAGGCGTACGCGCCCTAGCCAA
AACCCCTATAAAACCCCTTGCACAGTA--AAATACACCTCCAC-TCCACAGTAAAAACACACGCCCACAAGCAAGCAGAG
GCCCCAGAACCGATCGAAGCAACCAGTGCCATGGACAAGGAGGAGCAAGAAGACCGCGCGACGTGGGTCCCCGGCGCCCT
CATCGTCGGCGCGGGCCCGTCGGGGCTGGCAGCCGCCGCGTGCCTCGCGGCTCGCGGCGTGCCGGCCACGGTGCTCGAGA
GGTCCGACTCGCTGGCCTTTGCGTGGCGCCACCGCATGTACGACCGCCTCGCGCTCCACCTGCCCAAGCGCTTCTGCGAG
CTGCCGCTCCTCCCGTTCCCGGCCGAGTACCCGACCTACCCCTGCAAGGACCAGTTCGTGGCGTACATGGAGGCGTACGC
CGCCGCGGCGGGCGTGGCCCCTCGCTTCGGCGCCAGCGTCGAGGAGGCCGCGTTCGACGCGTCTGCGGGCGCCTGGGCGG
TGCGCCTGGCGGGCGGCGAGGTGCTGATGACCAAGTGGCTGGTCGTGGCGACGGGCGAGAACGCCGAGCCGCACGTCCCG
GACTTCCCCGGCATGCGGCAGTTCGCCGGGCGCGTCCTGCACACGTGCGAGTACAAGTGCGGCGAGGAGTTCGCCGGGGA
AAAGGTGTTGGTGGTGGGGTGCGGGAACTCCGGCATGGAGGTGAGCTTGGATTTGTGCCGGCATGGCGCTAAGCCCTCCA
TGGTGGTGCGGAACACGGTAATACTC-----------CACAATCACAATGAGCTCGTGCTCTATCTACGTAGCGAAGATT
ATGCTGTTAGGATCCGTCCTTGTTTTCTTGCTGCCTTTTGTTTCTTTTCTGTTGTAGTTCGTGCAATTATTTTTTACTCT
GCTCCTCTTTGGTGCACTTAACTTCTTGGGCATTTCCCCTTCGGTGCCTAGCCTATTTTCTCCGTGTCACGCACGCACCC
TACTTGCTGCCATCTTTCATGACAAGCATGTTCCAATCTGCATGGGTGCTGTTGTTGATCCGTTTTGTTTCCCTTCTCTT
TTGCTTC----AACTATTTATGCCCGCCCGTTTCGTCTCTCGCCGTTGGAGCGAGCGATCATTCACGCTGAAACTAAGTG
CGCACGGTCATTTTCTT---TTGTACAGGTCCATGTGCTGCCAAAGGAGATGTTGGGTGTGTCCACGTTTGGCATTGCCA
TGGCTTTGCTCAAATGGCTGCCGGTCCAGCTGGTGGATCGGTTCATCCTGGCGGCGGCGCGCTTGACCCTGGGCAACACG
AGCCAGCTCGGGCTTAGGCGGCCCAAGACGGGGCCCATCGAGCTGAAGAACCTCACCGGCAGAACCCCCGTGCTGGACGT
CGGGACTCTAGACCACATCAAATCAGGCAAAATTAAGGTTAGTGCCCTCAGTCGACTAGCCTTGTTCCACGAAAGAATAA
TTAAGATTGGCGTAAACTGTCGAAACGTTAGCCGTGCGGGCCACCGCCCAATCTGGCATATCATACCAGTTATCAGCCAG
GCCTTGAATGAAAGCTCACA---C---AAGCTCCATTTCTTCTCTGTCGCCACACCACCACA---------------GCA
CATGCACGACTTTACGTTTCTCTGCCGATTTCCT-------TGTGTATGTATGCGC---TGAGGTCATGTGATAACCAGG
TGGTAGGAGCAGTGAAGGAGGTGACGAGGCTCGGGGCCAGGCTCGCGGACGGCAAGGAGGAGCAGCAGTTCGACGCAATA
ATACTGGCGACGGGCTACAGGAGCAACGTGCCGTCCTGGCTCAAGGTAAATATAAACAA---CAACCCAAGTGACGCCAC
CAAAAAGGACTCCCTTGTTCGTTTTTGGTCTGCACA------GCTTAGCGCAACAGTACTGGCACAGTAGGCGTCATGCC
GTCACCTTGCCCTGCGTCCCCGCGTCACGGCCGTCCTCC---CCCTTCCCCTGTTGGGCCA------TTTCCCTTCTCGT
GTATCGGGGAGGGGCAGAGGCAGCTCGTGCCCTCGCCTGAGATCAGCCATGCGTTCCTTTCTCCCGAACTGTCCACCTCT
CTCGCGCCAAGTGATCGAGTCAGTGACTCACCGTGGGCGTGGGCATGGGCATGGGCGCCCACCGGCGTGGATGCTGGACT
CGAGAGTTTGGATATACGCTTGCGTTGCGTCGGCCCGGTCC----------------------------------AATCT
ATATGGTCTATTTCGGGTGCTAGTAT---CAGTATGGGACAACAAAAGGTTATCCAAAC---TACATATAGTCAAGAATT
GGCAAGAAAGGTAGTGC-TACTTGGTTGAGTCTGACATACTTACAGTAGATTTTACCCCATTAAGATCGCTAGAGCCTAA
GCTCCAAAAAAAAAAAAGAACGTTACAGCCTATGTAACTGTATGCGCTCCTTTTTTTTTGTCTAGTCTGATACACTCCAT
GGCTGATCGTTCCTAATTTTCAGGATGGGGGTGATGTCTTCACAACAGAAGGCACGCCCAAAACCCCTTTCCCTGACGGC
TGGAAAGGGCGAAACGGGCTCTACACCGTCGGATTCTCGCAGCGAGGGCTCCTCGGAACATCATCAGACGCCCTATGCAT
CGCCAGAGATATATATGGCCAATGGAGGGAAAGAGAAAGAGAACGAGAAAGAGATAAACCCACTAGCAATGTGCACTAAG
CTGATAGCTCTGTTTGATTCTCATGTGAATGTACAGCGTTTGAGTAGGAGTTTTGTGCATATAACAACC----CGTCTCT
TGCCTGTCGCTGGGCACAACATTTGCTAAATGTTTTGGGATGATGTTTAGTGGAGTAGAACGGTGGTATGTGTAGCGTGT
CCCTAGAGCACGTAAGCCAGCTTCTGCCAGAG--TTTTTTTTTTAGAATTGCCAAGAGCTTTTTTTTTTTTTTGAGAAAT
AATTGCCAAGAGCTACGACGCGTTCGGCTGC-CAGCAGCCACCTCTTTCGGCCTCATGGGCTGGTAGCCCATGAATCCAG
CCTGACGCCCGTTCGGCAGTTGCTTGGACCAGGTGTTGTTAGCCCAATTCGGTGAGAG-AGAAAGGCTGGGCTGAAAGGG
GGTTGAGTATGGGCTGTAGGCCTATTTTTTTCTTCTTTGCTACGACCTTTCCAATACATAGCAGTTTTTCCC--------
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------------------------------------
>chr3D_28
---------------------------AGGCGGAGTAGGAAGATTGTGACGAGCAGCGGGGGCTTCATATCATATCATA-
----ATAAATATTTGCAGCGAGCCTGACTTGTGACAACTGTAGCTTGTAGGCGATTCCTCGCCCATCATTTTGAACTCGA
TCGCTCCGAGTTGACTCGTACCACCAGCCCATC--CTTACACCATCGACTGCT-CTTTGCCTCTTTGGCCATTGGACTAC
CAATTAATCCTCGCCAACCTCATTGATTTATAC------AGCTAGTGCTACATCCTTCACGTACTAGAAGTAGAACCACA
AGCAGAGGGGGGAAGCAAATGCTCTGAGTCTCCGTGTTGAAACCGCTGGAACACCCTGAGCTGCTTTTGGTGTGGCCGGC
TGGAATTGCTCTGCCACTCCTCATGTGCACATCACATTTAGCCCTCTCGCTGTCCAAACTACTGCCTGCATCCACCGAAA
AATAGATAGTTG---------------TTATTTGTCGAGAGCATATAATCATACTATGCCAGTTCCTGGAAAACAGGATG
CTCCCAAGCTCCCATCAAAGGTCACTGTTGCCCATGATCTCTGGATTGTTGCTGTTGGGTTCCGATCAGAGCAGAGTGGT
CTTGCGTTATTAACAGAGACAAGCCAAATTTACAACCAAGGACAAAGACCC---GGTAATTCCCACCTACATCTACCGAG
GGCAGCGTGGACCACGTACGCACGGTCCATGATATCGTCAAGTGACAGACACCTTCAAGTCTTCAAGTTCCATTTTTCCT
TTTTG-----------------------------CGTTCGGGTTCAAGGGCTTTTAAACTGAGCAAGAGCAAGGAAATAC
GAGCTTCCAAAGCTGCTAGGCGTACGCCCGCCCGCGAGTCTCCAAGCTCCTGCGGATGAAGGC--------CCTCGCCAA
AACCCCTATAAAACCCCTTGCACAGTA--AAACACACCTCCACTTCCACAGTAAAAACCCACGCCCACAGGCAAGCAGAG
ACCCCAGGACCGATCGAAGCAGCCAGTGCCATGGACAAGGAGGAGCAGGAAGGCCGCGCGACGTGGGTCCCCGGCGCCGT
CATCGTCGGCGCGGGCCCGTCGGGGCTCGCCGCGGCCGCGTGCCTCGCGGCTCGGGGCGTGCCGGCCACGGTGCTCGAGA
GGTCCGACTCGCTGGCCTTTACGTGGCGCCACCGCATGTACGACCGCCTCGCGCTCCACCTGCCCAAGCGCTTCTGCGAG
CTGCCGCTCCTCCCGTTCCCGGCCGAGTACCCGACCTACCCCTGCAAGGACCAGTTCGTGGCGTACATGGAGGCCTACGC
CGCCGCGGCGGGCGTGGCCCCTCGCTTCGGCGCCAGCGTCGAGGAGGCCGCGTTCGACGCGTCCGCGGCCGCCTGGGCGG
TGCGCCTGGCGGGCGGCGAGGTGCTGATGACGAGGTGGCTGGTCGTGGCGACGGGCGAGAACGCGGAGCCGCACGTCCCG
GACTTCCCCGGCATGCAGCAGTTCGCCGGCCGCGTCCTGCACACGTGCGAGTACAAGTGCGGCGAGGAGTTCGCCGGGGA
GAAGGTGTTGGTGGTGGGGTGCGGGAACTCCGGCATGGAGGTGAGCCTGGATTTGTGCCGGCATGGCGCTAAGCCCTCCA
TGGTGGTGCGGAACACGGTAATACTC-----------CACAATCACAATGAGCTCTTGCTATATATACCT----AAGATT
GTGCTGTTAGGATCCGTACTCTC-TTCTTGCTGCCTTTTGTT-----------GTAGTTCGTGCAATTATT-TTGACTCT
GCTCCTCTTTGGTGCACTTAACTTCTTGGGCATTTCCCCTTCGGTGCCTAGCCTATTTTCTCTCTGTCTCACAC--ACCT
TACTTGCTGCCATCTTTCATGACAAGCATGTTCCAATCTGCATGGGTGCTGTTGTTGATCCGTTTTGTTTCCCTTCCCTT
TTGCTTC----AACTATTTATGCCCGCCCGTTTC--------------------------ATTCACGCTAAAACTAATAA
GTACTCACGGTAAAAAAAAATTGTACAGGTCCATGTGCTGCCAAAGGAGATGCTGGGTGTGTCGACGTTTGGCATTGCCA
TGGCTCTGCTCAAATGGCTGCCGGTCCAGCTGGTGGATCGGTTCATCCTGGCGGCGGCGCGCTTGACCCTCGGCAACACG
AGCCGGCTCGGGCTTAGGCGGCCCAAGACGGGGCCCATCGAGCTGAAGAACCTCACCGGCAGAACCCCCGTGCTGGACGT
CGGGACTCTAGACCACATCAAATCAGGCAAAATTAAGGTTGGTTA------------------GTTCCACCAAGGATTAA
TTGAGATTGGCGTAAACTGTCGAAACGTGCCT--------------CCCAATCTGGCATATCATACCAGTTACCAGCCAG
GCCTTGAATGATAGCTCACTCATC---AAGCTCCATTTCTTCACTGTCGCCACAGCACCACAGCACAGCACAGCACTGCA
CATGCACGCCTTTACGTTTCTCTGCCGATTTCCTATCAGCTTGTGC----GTGCGCTGATGAGGTCATGTGATAACCAGG
TGGTAGGAGCAGTGAAGGAGGTGACGAGGGTCGGGGCCAGGCTCGCGGACGGCAAGGAGGAGCAGCAGTTCGACGCAATA
ATACTGGCGACGGGCTACAGGAGCAACGTGCCGTCCTGGCTCAAGGTAAATATAAACAACAACAACCCAAGTGACGCCAC
CAAAAAGGACCCCCTTGTTCGTTTTTGTTCTGCACA------GCTTAGCAAAACAGTACTGGCACAGTG-----------
--------------------CGCGTCACGGCCGTCCTCC---CCCTTCCCCTGTTGGGCCA------TTTCCCTTCTCGT
GTATCGGGGAGGGGCAGAGGCAGCTCGTGCCCTCGCCTGAGATCAGCCATGCGTTCCTTTCTCCCGAACTGTCCGCCTCT
CTCGCGCCAAGTGATCGAGTCAGTGACTCACCGTGGGCGTGGGCATGGGCATGGGCGCCCACCGGCGTGGATGCTGGACT
CGAGAGTTTGGATATACGCTTGCGTTGCGTCGGCCCGG----TCCATACTTGTGGATTGCTCAATATGGCCATCTAATCT
ATATGGTCTATTTCGGGTGCTAGTAT---CAGCATGGGACGACAAAAGGTTATCCAAACTAGTACATATAGTCAAGA--T
GGCATGAAAGGTACTACGTACTTGGTTCAGTCTAACA---TACTTT--GATTTTACCCCATTATAA--GTTCACTAGAGC
AAGCCCGCAATACATTG---------AGCCCCTGTAACTGTATGCGCTCCTTTCC-TCTGTCTATTCTGATACACTTCAT
GGCTGATCGCTCCTAATTTGCAGGATGGAGGGGATGTCTTCACAAGAGAAGGCACGCCCAAAACCCCTTTCCCTGACGGC
TGGAAAGGGCGAAACGGCCTCTACACCGTCGGATTCTCGCAGCGAGGGCTCCTCGGAGCATCGTCAGACGCCCTATGCGT
CGCCAGAGATATACATTGCCAATGGAGGGAAAGAGAAAGAGAA------AGAGATAAACCCACTAGCGATGTGCACCAAG
CTGATAGCTCTGTTTGATTCTCGTGGGAATGTACAGCGTTTAAGTAGGAGTTTTGTGCATATAACAT----CTCGTCTCT
TGCCTGTCGCAGGGCACAACATTTGCTAAATGTTTTGGGATGATGTTTAGTGGAGTAGAACGGTGGTATGTGTAACGTGT
CCCTATAGCACGCAAGCCAGCTTCTGGCCAGAGTTTTGTTTTTTAGAATTGCCAATACCTTTTTTTTAGAATAAT-----
-------------TACGATGCGTTCGGCTGGTCAGCAGCCACTCCTTTCAGCCACATGGGTTGGTAGCCCAGGAATCCAG
CTTGG-GCCCGTTCGGCCGTTGCTTGGACCAGGTGTTGTTGCCCCAATTCGGCGGGGGAAGAAAGGCTGGGCTGAAAAAG
GGGTTAGTATGG-CTGTAGGCCTAA-TTTTTCTTCTTTGCTACGATTTTTCCAATACAGAGCAGTTTTTCCC--------
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------------------------------------
>SNPs
SS---------S-------------------------------------------------------------------S
SSSS--------------------------------------------S-------------------------------
-------------------------------S---------------------S--------------S-----------
SS-----------S-------------------SSS-----------------------------S--------------
S-------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-----------S----------------SS--------------------------------------------------
----------------------------------------------------------------------S---------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S------------SS------------------------------
--------------------------------S--------------------S--------------------------
---------------------------SS---------------------------------------------------
----------------S---------------------------------------------------------------
-S------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------S-----------------------------------------------------
----------------------------------------S---------------------------------------
----------------------------------------S--S------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-----------------------SSSSSSSSSSSSSS------------------------S------------------
-------------------------------------------S--------------------------S---------
---------------S-----------S----------------------------S-----------------------
----------------------------------------------S---------------------------------
-------SSSS------------------------------------------------------------------S--
-S-S----------------------------------------------------------------------------
-----------------------------S----------S---------------------------------------
--------------S--S--------------------------------------------------------------
----------------------------------------------------------------S--------S------
-----------S--------S-----S-----S---------------------------S--------SS-S-------
-S----------------------SSS-----------------------S-----------------------------
------------S-----------------------SSS--------------------------S---------S----
--------------------------------------------------------------------------------
----------------------------------------------------SSS-S--S-SS-S---------------
------------------------------------SSSSSS----------------S----------S----------
---------------------------------------SSS----------------SSSSSSSSS-------------
---------SS------S---------------------S-SSS---------------------S--------------
--------------------------------S-----S---------------S---------S---------------
-----S----------------------------------SS-------S------------------------------
--------------------------SSS--------------------S------------------------------
------------------------S-----------------------------------------SS------S-----
--------S------------------S-----------------S------------------------S---------
----S------------S-------------S-----------------------------------------S------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------S------------------------------------------S-SSS---------
------S----S-S----S----------S-----SS---S----S----------------------------------
-----------------------S-SSSS-S-SS-S---S-S-SS---SSS-S-S--SSS--------------------
----------------------------------------------S---S----------------------S------
-----S---S------------------------------------------------------------S---------
------------------------S-----------------------------S-----------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ACTTACACCATCGACTGCCG--------------------------
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------------------------------------
>reverse_2010
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------CAAACTATTTATGCCCGCCCG--------------------------------------------------
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------------------------------------
>forward_1897
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------CCTTCGGTGCCTAGCCTATC-----------------------
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------------------------------------
>reverse_3869
--------------------------------------------------------------------------------
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----------------------------TGTGTGTGTGTGTGTGGGAA--------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
