Multiple sequence alignment - TraesCS3A01G205000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G205000 chr3A 100.000 2951 0 0 1 2951 360519447 360516497 0.000000e+00 5450.0
1 TraesCS3A01G205000 chr3D 93.987 1979 39 28 833 2779 278801487 278803417 0.000000e+00 2922.0
2 TraesCS3A01G205000 chr3D 85.463 227 24 9 99 316 140419666 140419892 8.230000e-56 228.0
3 TraesCS3A01G205000 chr3D 94.574 129 7 0 2822 2950 278803401 278803529 1.790000e-47 200.0
4 TraesCS3A01G205000 chr3B 94.816 1871 61 15 1085 2950 371978729 371976890 0.000000e+00 2885.0
5 TraesCS3A01G205000 chr3B 87.619 420 33 8 405 807 61538105 61537688 1.240000e-128 470.0
6 TraesCS3A01G205000 chr3B 88.350 206 16 5 807 1007 371979321 371979119 1.060000e-59 241.0
7 TraesCS3A01G205000 chr5D 91.727 411 18 7 408 804 324595269 324595677 9.240000e-155 556.0
8 TraesCS3A01G205000 chr4D 88.864 440 31 9 388 812 39851908 39851472 2.610000e-145 525.0
9 TraesCS3A01G205000 chr4D 90.050 402 29 7 418 808 359422690 359422289 7.300000e-141 510.0
10 TraesCS3A01G205000 chr4D 90.256 195 15 4 1 194 416768780 416768971 4.880000e-63 252.0
11 TraesCS3A01G205000 chr6B 90.024 411 27 5 408 806 420919887 420919479 1.210000e-143 520.0
12 TraesCS3A01G205000 chr6B 88.345 429 33 9 408 822 512893336 512892911 1.580000e-137 499.0
13 TraesCS3A01G205000 chr6B 88.421 285 27 6 3 285 68392598 68392318 3.640000e-89 339.0
14 TraesCS3A01G205000 chr7D 89.706 408 31 5 408 805 49835946 49836352 7.300000e-141 510.0
15 TraesCS3A01G205000 chr7D 87.179 312 27 3 405 704 138330061 138330371 2.820000e-90 342.0
16 TraesCS3A01G205000 chr7D 100.000 28 0 0 2400 2427 252368359 252368386 5.000000e-03 52.8
17 TraesCS3A01G205000 chr2B 89.487 409 29 7 408 804 759521135 759521541 3.390000e-139 505.0
18 TraesCS3A01G205000 chr2B 89.216 408 29 6 408 803 584101645 584101241 2.040000e-136 496.0
19 TraesCS3A01G205000 chr2B 88.193 415 31 13 407 805 93384168 93383756 2.060000e-131 479.0
20 TraesCS3A01G205000 chr2B 88.101 395 31 10 407 787 36803723 36804115 3.470000e-124 455.0
21 TraesCS3A01G205000 chr1B 89.435 407 29 6 410 804 513429814 513430218 4.390000e-138 501.0
22 TraesCS3A01G205000 chr1B 87.654 324 31 8 3 321 583977661 583977980 4.650000e-98 368.0
23 TraesCS3A01G205000 chr7B 88.780 410 31 8 408 803 669048809 669048401 3.420000e-134 488.0
24 TraesCS3A01G205000 chr7B 85.583 326 23 12 3 319 663294164 663294474 1.320000e-83 320.0
25 TraesCS3A01G205000 chr7B 84.098 327 32 14 3 321 5144331 5144017 6.180000e-77 298.0
26 TraesCS3A01G205000 chr5B 88.592 412 31 11 408 804 590182311 590181901 1.230000e-133 486.0
27 TraesCS3A01G205000 chr5B 88.592 412 30 7 408 803 27811000 27810590 4.420000e-133 484.0
28 TraesCS3A01G205000 chr5B 92.373 118 9 0 3 120 704316430 704316547 5.060000e-38 169.0
29 TraesCS3A01G205000 chr2D 90.402 323 26 5 1 318 20178659 20178981 1.260000e-113 420.0
30 TraesCS3A01G205000 chr2D 84.649 228 25 7 99 317 435770387 435770613 4.950000e-53 219.0
31 TraesCS3A01G205000 chr2D 100.000 29 0 0 2398 2426 433277785 433277757 1.000000e-03 54.7
32 TraesCS3A01G205000 chr2A 85.650 223 22 9 99 316 717001802 717001585 2.960000e-55 226.0
33 TraesCS3A01G205000 chr6D 85.153 229 22 9 99 316 79863312 79863085 1.060000e-54 224.0
34 TraesCS3A01G205000 chr1D 85.520 221 25 6 99 312 460551706 460551926 1.060000e-54 224.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G205000 chr3A 360516497 360519447 2950 True 5450 5450 100.0000 1 2951 1 chr3A.!!$R1 2950
1 TraesCS3A01G205000 chr3D 278801487 278803529 2042 False 1561 2922 94.2805 833 2950 2 chr3D.!!$F2 2117
2 TraesCS3A01G205000 chr3B 371976890 371979321 2431 True 1563 2885 91.5830 807 2950 2 chr3B.!!$R2 2143

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
530 531 0.179111 CGCATGAGGTCCGCTCTAAA 60.179 55.0 0.0 0.0 0.0 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2188 2521 0.663153 GCAGGTTTCACTGTGGTGTC 59.337 55.0 8.11 0.0 43.41 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.662961 CACTGCGCTCGACCACCA 62.663 66.667 9.73 0.00 0.00 4.17
27 28 4.664677 ACTGCGCTCGACCACCAC 62.665 66.667 9.73 0.00 0.00 4.16
28 29 4.662961 CTGCGCTCGACCACCACA 62.663 66.667 9.73 0.00 0.00 4.17
29 30 3.939837 CTGCGCTCGACCACCACAT 62.940 63.158 9.73 0.00 0.00 3.21
30 31 3.490759 GCGCTCGACCACCACATG 61.491 66.667 0.00 0.00 0.00 3.21
31 32 3.490759 CGCTCGACCACCACATGC 61.491 66.667 0.00 0.00 0.00 4.06
32 33 3.490759 GCTCGACCACCACATGCG 61.491 66.667 0.00 0.00 0.00 4.73
33 34 2.815211 CTCGACCACCACATGCGG 60.815 66.667 0.00 0.00 0.00 5.69
54 55 4.803426 GCCGTCCTCACGCCTGAG 62.803 72.222 5.79 5.79 45.29 3.35
55 56 4.803426 CCGTCCTCACGCCTGAGC 62.803 72.222 7.16 0.00 45.29 4.26
56 57 4.803426 CGTCCTCACGCCTGAGCC 62.803 72.222 7.16 0.14 42.55 4.70
57 58 4.459089 GTCCTCACGCCTGAGCCC 62.459 72.222 7.16 0.00 42.55 5.19
58 59 4.704103 TCCTCACGCCTGAGCCCT 62.704 66.667 7.16 0.00 42.55 5.19
59 60 4.154347 CCTCACGCCTGAGCCCTC 62.154 72.222 7.16 0.00 42.55 4.30
60 61 3.385384 CTCACGCCTGAGCCCTCA 61.385 66.667 0.00 0.00 37.72 3.86
142 143 4.292178 GCGCCCTGGATCCGAGAG 62.292 72.222 7.39 0.00 0.00 3.20
143 144 4.292178 CGCCCTGGATCCGAGAGC 62.292 72.222 7.39 7.38 0.00 4.09
144 145 3.934962 GCCCTGGATCCGAGAGCC 61.935 72.222 7.39 1.72 38.78 4.70
145 146 2.123077 CCCTGGATCCGAGAGCCT 60.123 66.667 7.39 0.00 39.11 4.58
146 147 1.764054 CCCTGGATCCGAGAGCCTT 60.764 63.158 7.39 0.00 39.11 4.35
147 148 1.745264 CCTGGATCCGAGAGCCTTC 59.255 63.158 7.39 0.00 39.11 3.46
148 149 1.361993 CTGGATCCGAGAGCCTTCG 59.638 63.158 7.39 0.77 39.11 3.79
149 150 2.028337 GGATCCGAGAGCCTTCGC 59.972 66.667 0.00 0.00 39.19 4.70
150 151 2.354072 GATCCGAGAGCCTTCGCG 60.354 66.667 0.00 0.00 44.76 5.87
155 156 4.891566 GAGAGCCTTCGCGAAGAA 57.108 55.556 42.22 14.74 40.79 2.52
165 166 2.742372 GCGAAGAAGGAGCGCCAA 60.742 61.111 9.88 0.00 44.55 4.52
166 167 2.744768 GCGAAGAAGGAGCGCCAAG 61.745 63.158 9.88 0.00 44.55 3.61
167 168 2.103042 CGAAGAAGGAGCGCCAAGG 61.103 63.158 9.88 0.00 36.29 3.61
168 169 1.296715 GAAGAAGGAGCGCCAAGGA 59.703 57.895 9.88 0.00 36.29 3.36
169 170 1.003233 AAGAAGGAGCGCCAAGGAC 60.003 57.895 9.88 0.00 36.29 3.85
170 171 2.436824 GAAGGAGCGCCAAGGACC 60.437 66.667 9.88 0.00 36.29 4.46
171 172 3.978571 GAAGGAGCGCCAAGGACCC 62.979 68.421 9.88 0.00 36.29 4.46
215 216 2.585247 GGGCTTTCCCGACGATCG 60.585 66.667 14.88 14.88 43.94 3.69
216 217 2.183555 GGCTTTCCCGACGATCGT 59.816 61.111 22.97 22.97 38.40 3.73
217 218 1.877165 GGCTTTCCCGACGATCGTC 60.877 63.158 33.22 33.22 38.40 4.20
218 219 1.139095 GCTTTCCCGACGATCGTCT 59.861 57.895 37.12 12.34 42.54 4.18
219 220 0.866483 GCTTTCCCGACGATCGTCTC 60.866 60.000 37.12 19.62 42.54 3.36
220 221 0.248539 CTTTCCCGACGATCGTCTCC 60.249 60.000 37.12 18.94 42.54 3.71
221 222 0.961857 TTTCCCGACGATCGTCTCCA 60.962 55.000 37.12 21.90 42.54 3.86
222 223 1.374343 TTCCCGACGATCGTCTCCAG 61.374 60.000 37.12 24.83 42.54 3.86
223 224 2.113433 CCCGACGATCGTCTCCAGT 61.113 63.158 37.12 9.25 42.54 4.00
224 225 1.062685 CCGACGATCGTCTCCAGTG 59.937 63.158 37.12 23.89 42.54 3.66
225 226 1.062685 CGACGATCGTCTCCAGTGG 59.937 63.158 37.12 21.03 42.54 4.00
226 227 1.226717 GACGATCGTCTCCAGTGGC 60.227 63.158 34.97 11.15 41.57 5.01
227 228 2.105128 CGATCGTCTCCAGTGGCC 59.895 66.667 7.03 0.00 0.00 5.36
228 229 2.105128 GATCGTCTCCAGTGGCCG 59.895 66.667 3.51 6.83 0.00 6.13
229 230 4.148825 ATCGTCTCCAGTGGCCGC 62.149 66.667 8.71 8.71 0.00 6.53
232 233 4.803426 GTCTCCAGTGGCCGCGAG 62.803 72.222 8.23 12.58 0.00 5.03
272 273 3.951765 GCGGAGGCTAACCCTAGT 58.048 61.111 0.00 0.00 46.60 2.57
273 274 1.740905 GCGGAGGCTAACCCTAGTC 59.259 63.158 0.00 0.00 46.60 2.59
274 275 2.031360 CGGAGGCTAACCCTAGTCG 58.969 63.158 0.00 0.00 46.60 4.18
275 276 1.740905 GGAGGCTAACCCTAGTCGC 59.259 63.158 0.00 0.00 46.60 5.19
276 277 1.740905 GAGGCTAACCCTAGTCGCC 59.259 63.158 0.00 0.00 46.60 5.54
277 278 1.746322 GAGGCTAACCCTAGTCGCCC 61.746 65.000 0.00 0.00 46.60 6.13
278 279 2.804912 GGCTAACCCTAGTCGCCCC 61.805 68.421 0.00 0.00 36.81 5.80
279 280 3.126528 CTAACCCTAGTCGCCCCG 58.873 66.667 0.00 0.00 0.00 5.73
280 281 1.454479 CTAACCCTAGTCGCCCCGA 60.454 63.158 0.00 0.00 0.00 5.14
281 282 1.453762 CTAACCCTAGTCGCCCCGAG 61.454 65.000 0.00 0.00 36.23 4.63
282 283 2.215451 TAACCCTAGTCGCCCCGAGT 62.215 60.000 0.43 0.43 42.43 4.18
283 284 3.217743 CCCTAGTCGCCCCGAGTC 61.218 72.222 0.00 0.00 40.22 3.36
284 285 3.584052 CCTAGTCGCCCCGAGTCG 61.584 72.222 5.29 5.29 40.22 4.18
285 286 4.253257 CTAGTCGCCCCGAGTCGC 62.253 72.222 7.12 0.00 40.22 5.19
317 318 4.862823 GAGGGACGGAGGAGGGGG 62.863 77.778 0.00 0.00 0.00 5.40
319 320 4.410033 GGGACGGAGGAGGGGGAA 62.410 72.222 0.00 0.00 0.00 3.97
320 321 2.764547 GGACGGAGGAGGGGGAAG 60.765 72.222 0.00 0.00 0.00 3.46
321 322 3.471806 GACGGAGGAGGGGGAAGC 61.472 72.222 0.00 0.00 0.00 3.86
323 324 4.806339 CGGAGGAGGGGGAAGCCT 62.806 72.222 0.00 0.00 33.97 4.58
324 325 3.093172 GGAGGAGGGGGAAGCCTG 61.093 72.222 0.00 0.00 30.70 4.85
325 326 3.803162 GAGGAGGGGGAAGCCTGC 61.803 72.222 0.00 0.00 30.70 4.85
328 329 3.661648 GAGGGGGAAGCCTGCCAA 61.662 66.667 0.00 0.00 33.82 4.52
329 330 2.948924 AGGGGGAAGCCTGCCAAT 60.949 61.111 0.00 0.00 33.82 3.16
330 331 2.039462 GGGGGAAGCCTGCCAATT 59.961 61.111 0.00 0.00 33.82 2.32
331 332 1.613332 GGGGGAAGCCTGCCAATTT 60.613 57.895 0.00 0.00 33.82 1.82
332 333 1.598517 GGGGAAGCCTGCCAATTTG 59.401 57.895 0.00 0.00 33.82 2.32
333 334 0.904394 GGGGAAGCCTGCCAATTTGA 60.904 55.000 0.00 0.00 33.82 2.69
334 335 0.975887 GGGAAGCCTGCCAATTTGAA 59.024 50.000 0.00 0.00 32.01 2.69
335 336 1.556451 GGGAAGCCTGCCAATTTGAAT 59.444 47.619 0.00 0.00 32.01 2.57
336 337 2.624636 GGAAGCCTGCCAATTTGAATG 58.375 47.619 0.00 0.00 0.00 2.67
337 338 2.234414 GGAAGCCTGCCAATTTGAATGA 59.766 45.455 0.00 0.00 0.00 2.57
338 339 3.118519 GGAAGCCTGCCAATTTGAATGAT 60.119 43.478 0.00 0.00 0.00 2.45
339 340 3.814005 AGCCTGCCAATTTGAATGATC 57.186 42.857 0.00 0.00 0.00 2.92
340 341 3.371965 AGCCTGCCAATTTGAATGATCT 58.628 40.909 0.00 0.00 0.00 2.75
341 342 3.383825 AGCCTGCCAATTTGAATGATCTC 59.616 43.478 0.00 0.00 0.00 2.75
342 343 3.131577 GCCTGCCAATTTGAATGATCTCA 59.868 43.478 0.00 0.00 0.00 3.27
343 344 4.679662 CCTGCCAATTTGAATGATCTCAC 58.320 43.478 0.00 0.00 0.00 3.51
344 345 4.348656 CTGCCAATTTGAATGATCTCACG 58.651 43.478 0.00 0.00 0.00 4.35
345 346 3.129113 TGCCAATTTGAATGATCTCACGG 59.871 43.478 0.00 0.00 0.00 4.94
346 347 3.129287 GCCAATTTGAATGATCTCACGGT 59.871 43.478 0.00 0.00 0.00 4.83
347 348 4.731773 GCCAATTTGAATGATCTCACGGTC 60.732 45.833 0.00 0.00 0.00 4.79
348 349 4.637534 CCAATTTGAATGATCTCACGGTCT 59.362 41.667 0.00 0.00 0.00 3.85
349 350 5.817296 CCAATTTGAATGATCTCACGGTCTA 59.183 40.000 0.00 0.00 0.00 2.59
350 351 6.018425 CCAATTTGAATGATCTCACGGTCTAG 60.018 42.308 0.00 0.00 0.00 2.43
351 352 5.914898 TTTGAATGATCTCACGGTCTAGA 57.085 39.130 0.00 0.00 0.00 2.43
352 353 4.902443 TGAATGATCTCACGGTCTAGAC 57.098 45.455 14.87 14.87 0.00 2.59
353 354 4.527944 TGAATGATCTCACGGTCTAGACT 58.472 43.478 21.88 0.44 0.00 3.24
354 355 5.681639 TGAATGATCTCACGGTCTAGACTA 58.318 41.667 21.88 5.40 0.00 2.59
355 356 5.760743 TGAATGATCTCACGGTCTAGACTAG 59.239 44.000 21.88 17.66 0.00 2.57
356 357 3.468770 TGATCTCACGGTCTAGACTAGC 58.531 50.000 21.88 5.26 0.00 3.42
357 358 3.134985 TGATCTCACGGTCTAGACTAGCT 59.865 47.826 21.88 6.92 0.00 3.32
358 359 4.344390 TGATCTCACGGTCTAGACTAGCTA 59.656 45.833 21.88 5.05 0.00 3.32
359 360 4.325028 TCTCACGGTCTAGACTAGCTAG 57.675 50.000 21.88 19.44 46.57 3.42
370 371 4.035612 AGACTAGCTAGAACTCCACACA 57.964 45.455 27.45 0.00 0.00 3.72
371 372 4.408276 AGACTAGCTAGAACTCCACACAA 58.592 43.478 27.45 0.00 0.00 3.33
372 373 5.020132 AGACTAGCTAGAACTCCACACAAT 58.980 41.667 27.45 0.00 0.00 2.71
373 374 5.126384 AGACTAGCTAGAACTCCACACAATC 59.874 44.000 27.45 9.15 0.00 2.67
374 375 3.238108 AGCTAGAACTCCACACAATCG 57.762 47.619 0.00 0.00 0.00 3.34
375 376 1.661112 GCTAGAACTCCACACAATCGC 59.339 52.381 0.00 0.00 0.00 4.58
376 377 2.930887 GCTAGAACTCCACACAATCGCA 60.931 50.000 0.00 0.00 0.00 5.10
377 378 1.512926 AGAACTCCACACAATCGCAC 58.487 50.000 0.00 0.00 0.00 5.34
378 379 1.202639 AGAACTCCACACAATCGCACA 60.203 47.619 0.00 0.00 0.00 4.57
379 380 1.806542 GAACTCCACACAATCGCACAT 59.193 47.619 0.00 0.00 0.00 3.21
380 381 1.896220 ACTCCACACAATCGCACATT 58.104 45.000 0.00 0.00 0.00 2.71
381 382 3.052455 ACTCCACACAATCGCACATTA 57.948 42.857 0.00 0.00 0.00 1.90
382 383 3.002791 ACTCCACACAATCGCACATTAG 58.997 45.455 0.00 0.00 0.00 1.73
383 384 3.002791 CTCCACACAATCGCACATTAGT 58.997 45.455 0.00 0.00 0.00 2.24
384 385 4.180817 CTCCACACAATCGCACATTAGTA 58.819 43.478 0.00 0.00 0.00 1.82
385 386 4.765273 TCCACACAATCGCACATTAGTAT 58.235 39.130 0.00 0.00 0.00 2.12
386 387 4.570369 TCCACACAATCGCACATTAGTATG 59.430 41.667 0.00 0.00 37.79 2.39
387 388 4.332543 CCACACAATCGCACATTAGTATGT 59.667 41.667 0.00 0.00 45.81 2.29
388 389 5.163764 CCACACAATCGCACATTAGTATGTT 60.164 40.000 0.00 0.00 42.29 2.71
389 390 5.734035 CACACAATCGCACATTAGTATGTTG 59.266 40.000 0.00 0.00 42.29 3.33
390 391 5.641636 ACACAATCGCACATTAGTATGTTGA 59.358 36.000 0.00 0.00 42.29 3.18
391 392 6.183360 ACACAATCGCACATTAGTATGTTGAG 60.183 38.462 0.00 0.00 42.29 3.02
392 393 6.035975 CACAATCGCACATTAGTATGTTGAGA 59.964 38.462 0.00 0.00 42.29 3.27
393 394 6.593770 ACAATCGCACATTAGTATGTTGAGAA 59.406 34.615 0.00 0.00 42.29 2.87
394 395 7.119116 ACAATCGCACATTAGTATGTTGAGAAA 59.881 33.333 0.00 0.00 42.29 2.52
395 396 7.609760 ATCGCACATTAGTATGTTGAGAAAA 57.390 32.000 0.00 0.00 42.29 2.29
396 397 7.060600 TCGCACATTAGTATGTTGAGAAAAG 57.939 36.000 0.00 0.00 42.29 2.27
397 398 5.734498 CGCACATTAGTATGTTGAGAAAAGC 59.266 40.000 0.00 0.00 42.29 3.51
398 399 6.611381 GCACATTAGTATGTTGAGAAAAGCA 58.389 36.000 0.00 0.00 42.29 3.91
399 400 7.253422 GCACATTAGTATGTTGAGAAAAGCAT 58.747 34.615 0.00 0.00 42.29 3.79
400 401 8.397906 GCACATTAGTATGTTGAGAAAAGCATA 58.602 33.333 0.00 0.00 42.29 3.14
407 408 8.299570 AGTATGTTGAGAAAAGCATAAACAAGG 58.700 33.333 0.00 0.00 31.90 3.61
408 409 5.841810 TGTTGAGAAAAGCATAAACAAGGG 58.158 37.500 0.00 0.00 0.00 3.95
409 410 5.596361 TGTTGAGAAAAGCATAAACAAGGGA 59.404 36.000 0.00 0.00 0.00 4.20
410 411 5.705609 TGAGAAAAGCATAAACAAGGGAC 57.294 39.130 0.00 0.00 0.00 4.46
411 412 4.215399 TGAGAAAAGCATAAACAAGGGACG 59.785 41.667 0.00 0.00 0.00 4.79
412 413 3.057526 AGAAAAGCATAAACAAGGGACGC 60.058 43.478 0.00 0.00 0.00 5.19
413 414 0.802494 AAGCATAAACAAGGGACGCG 59.198 50.000 3.53 3.53 0.00 6.01
414 415 1.024579 AGCATAAACAAGGGACGCGG 61.025 55.000 12.47 0.00 0.00 6.46
415 416 1.022451 GCATAAACAAGGGACGCGGA 61.022 55.000 12.47 0.00 0.00 5.54
416 417 1.006832 CATAAACAAGGGACGCGGAG 58.993 55.000 12.47 0.00 0.00 4.63
417 418 0.611714 ATAAACAAGGGACGCGGAGT 59.388 50.000 12.47 0.00 0.00 3.85
418 419 0.393820 TAAACAAGGGACGCGGAGTT 59.606 50.000 12.47 2.60 0.00 3.01
419 420 0.464916 AAACAAGGGACGCGGAGTTT 60.465 50.000 12.47 8.85 0.00 2.66
420 421 0.464916 AACAAGGGACGCGGAGTTTT 60.465 50.000 12.47 0.00 0.00 2.43
421 422 1.164041 ACAAGGGACGCGGAGTTTTG 61.164 55.000 12.47 10.79 0.00 2.44
422 423 1.599797 AAGGGACGCGGAGTTTTGG 60.600 57.895 12.47 0.00 0.00 3.28
423 424 3.733960 GGGACGCGGAGTTTTGGC 61.734 66.667 12.47 0.00 0.00 4.52
424 425 2.668550 GGACGCGGAGTTTTGGCT 60.669 61.111 12.47 0.00 0.00 4.75
425 426 2.677979 GGACGCGGAGTTTTGGCTC 61.678 63.158 12.47 0.00 34.89 4.70
440 441 3.214253 CTCCCGAGCTCATCTGCA 58.786 61.111 15.40 0.00 34.99 4.41
441 442 1.227205 CTCCCGAGCTCATCTGCAC 60.227 63.158 15.40 0.00 34.99 4.57
442 443 2.202987 CCCGAGCTCATCTGCACC 60.203 66.667 15.40 0.00 34.99 5.01
443 444 2.202987 CCGAGCTCATCTGCACCC 60.203 66.667 15.40 0.00 34.99 4.61
444 445 2.580815 CGAGCTCATCTGCACCCA 59.419 61.111 15.40 0.00 34.99 4.51
445 446 1.812922 CGAGCTCATCTGCACCCAC 60.813 63.158 15.40 0.00 34.99 4.61
446 447 1.812922 GAGCTCATCTGCACCCACG 60.813 63.158 9.40 0.00 34.99 4.94
447 448 3.503363 GCTCATCTGCACCCACGC 61.503 66.667 0.00 0.00 0.00 5.34
448 449 2.267006 CTCATCTGCACCCACGCT 59.733 61.111 0.00 0.00 0.00 5.07
449 450 1.812922 CTCATCTGCACCCACGCTC 60.813 63.158 0.00 0.00 0.00 5.03
450 451 2.046988 CATCTGCACCCACGCTCA 60.047 61.111 0.00 0.00 0.00 4.26
451 452 2.104859 CATCTGCACCCACGCTCAG 61.105 63.158 0.00 0.00 0.00 3.35
452 453 2.285773 ATCTGCACCCACGCTCAGA 61.286 57.895 0.00 0.00 39.54 3.27
453 454 1.830587 ATCTGCACCCACGCTCAGAA 61.831 55.000 0.00 0.00 38.81 3.02
454 455 1.597854 CTGCACCCACGCTCAGAAA 60.598 57.895 0.00 0.00 0.00 2.52
455 456 1.153066 TGCACCCACGCTCAGAAAA 60.153 52.632 0.00 0.00 0.00 2.29
456 457 0.749818 TGCACCCACGCTCAGAAAAA 60.750 50.000 0.00 0.00 0.00 1.94
514 515 7.892778 TTTGTGTAGTAGATAATTTGACGCA 57.107 32.000 0.00 0.00 0.00 5.24
515 516 8.487313 TTTGTGTAGTAGATAATTTGACGCAT 57.513 30.769 0.00 0.00 0.00 4.73
516 517 7.463469 TGTGTAGTAGATAATTTGACGCATG 57.537 36.000 0.00 0.00 0.00 4.06
517 518 7.262048 TGTGTAGTAGATAATTTGACGCATGA 58.738 34.615 0.00 0.00 0.00 3.07
518 519 7.435192 TGTGTAGTAGATAATTTGACGCATGAG 59.565 37.037 0.00 0.00 0.00 2.90
519 520 6.923508 TGTAGTAGATAATTTGACGCATGAGG 59.076 38.462 0.00 0.00 0.00 3.86
520 521 5.918608 AGTAGATAATTTGACGCATGAGGT 58.081 37.500 0.00 0.00 0.00 3.85
521 522 5.986135 AGTAGATAATTTGACGCATGAGGTC 59.014 40.000 0.00 3.42 34.99 3.85
522 523 4.130118 AGATAATTTGACGCATGAGGTCC 58.870 43.478 12.93 0.00 33.46 4.46
523 524 1.086696 AATTTGACGCATGAGGTCCG 58.913 50.000 12.93 2.07 33.46 4.79
524 525 1.369091 ATTTGACGCATGAGGTCCGC 61.369 55.000 12.93 0.00 33.46 5.54
525 526 2.449031 TTTGACGCATGAGGTCCGCT 62.449 55.000 12.93 0.00 33.46 5.52
526 527 2.583593 GACGCATGAGGTCCGCTC 60.584 66.667 0.00 0.00 0.00 5.03
527 528 3.069980 GACGCATGAGGTCCGCTCT 62.070 63.158 0.00 0.00 0.00 4.09
528 529 1.725557 GACGCATGAGGTCCGCTCTA 61.726 60.000 0.00 0.00 0.00 2.43
529 530 1.320344 ACGCATGAGGTCCGCTCTAA 61.320 55.000 0.00 0.00 0.00 2.10
530 531 0.179111 CGCATGAGGTCCGCTCTAAA 60.179 55.000 0.00 0.00 0.00 1.85
531 532 1.539065 CGCATGAGGTCCGCTCTAAAT 60.539 52.381 0.00 0.00 0.00 1.40
532 533 2.565841 GCATGAGGTCCGCTCTAAATT 58.434 47.619 0.00 0.00 0.00 1.82
533 534 2.945668 GCATGAGGTCCGCTCTAAATTT 59.054 45.455 0.00 0.00 0.00 1.82
534 535 3.002759 GCATGAGGTCCGCTCTAAATTTC 59.997 47.826 0.00 0.00 0.00 2.17
535 536 3.973206 TGAGGTCCGCTCTAAATTTCA 57.027 42.857 0.00 0.00 0.00 2.69
536 537 4.280436 TGAGGTCCGCTCTAAATTTCAA 57.720 40.909 0.00 0.00 0.00 2.69
537 538 4.000988 TGAGGTCCGCTCTAAATTTCAAC 58.999 43.478 0.00 0.00 0.00 3.18
538 539 4.254492 GAGGTCCGCTCTAAATTTCAACT 58.746 43.478 0.00 0.00 0.00 3.16
539 540 4.254492 AGGTCCGCTCTAAATTTCAACTC 58.746 43.478 0.00 0.00 0.00 3.01
540 541 4.000988 GGTCCGCTCTAAATTTCAACTCA 58.999 43.478 0.00 0.00 0.00 3.41
541 542 4.636206 GGTCCGCTCTAAATTTCAACTCAT 59.364 41.667 0.00 0.00 0.00 2.90
542 543 5.123979 GGTCCGCTCTAAATTTCAACTCATT 59.876 40.000 0.00 0.00 0.00 2.57
543 544 6.349363 GGTCCGCTCTAAATTTCAACTCATTT 60.349 38.462 0.00 0.00 0.00 2.32
544 545 6.524586 GTCCGCTCTAAATTTCAACTCATTTG 59.475 38.462 0.00 0.00 36.42 2.32
545 546 6.429692 TCCGCTCTAAATTTCAACTCATTTGA 59.570 34.615 0.00 0.00 42.83 2.69
546 547 6.744537 CCGCTCTAAATTTCAACTCATTTGAG 59.255 38.462 6.03 6.03 45.22 3.02
547 548 6.250104 CGCTCTAAATTTCAACTCATTTGAGC 59.750 38.462 7.48 9.23 45.22 4.26
548 549 7.086376 GCTCTAAATTTCAACTCATTTGAGCA 58.914 34.615 7.48 0.00 45.22 4.26
549 550 7.758528 GCTCTAAATTTCAACTCATTTGAGCAT 59.241 33.333 7.48 0.00 45.22 3.79
550 551 9.286946 CTCTAAATTTCAACTCATTTGAGCATC 57.713 33.333 7.48 0.00 45.22 3.91
551 552 9.017509 TCTAAATTTCAACTCATTTGAGCATCT 57.982 29.630 7.48 0.00 45.22 2.90
552 553 7.884816 AAATTTCAACTCATTTGAGCATCTG 57.115 32.000 7.48 1.37 45.22 2.90
553 554 6.829229 ATTTCAACTCATTTGAGCATCTGA 57.171 33.333 7.48 3.49 45.22 3.27
554 555 5.874895 TTCAACTCATTTGAGCATCTGAG 57.125 39.130 7.48 7.75 45.22 3.35
556 557 6.041423 TCAACTCATTTGAGCATCTGAGTA 57.959 37.500 7.48 1.11 45.63 2.59
557 558 6.104665 TCAACTCATTTGAGCATCTGAGTAG 58.895 40.000 7.48 0.00 45.63 2.57
558 559 4.440880 ACTCATTTGAGCATCTGAGTAGC 58.559 43.478 7.48 0.00 44.80 3.58
559 560 4.161942 ACTCATTTGAGCATCTGAGTAGCT 59.838 41.667 7.48 1.41 44.80 3.32
565 566 0.318614 GCATCTGAGTAGCTCTCGGC 60.319 60.000 13.94 8.91 46.16 5.54
566 567 1.028130 CATCTGAGTAGCTCTCGGCA 58.972 55.000 13.94 6.78 46.16 5.69
567 568 1.406898 CATCTGAGTAGCTCTCGGCAA 59.593 52.381 13.94 2.94 46.16 4.52
568 569 1.545841 TCTGAGTAGCTCTCGGCAAA 58.454 50.000 13.94 0.00 46.16 3.68
569 570 1.893137 TCTGAGTAGCTCTCGGCAAAA 59.107 47.619 13.94 0.00 46.16 2.44
570 571 2.299013 TCTGAGTAGCTCTCGGCAAAAA 59.701 45.455 13.94 0.00 46.16 1.94
588 589 4.584327 AAAAAGACAAAATCGGGGTCTG 57.416 40.909 0.00 0.00 40.80 3.51
589 590 2.951229 AAGACAAAATCGGGGTCTGT 57.049 45.000 0.00 0.00 40.80 3.41
590 591 4.360951 AAAGACAAAATCGGGGTCTGTA 57.639 40.909 0.00 0.00 40.80 2.74
591 592 4.360951 AAGACAAAATCGGGGTCTGTAA 57.639 40.909 0.00 0.00 40.80 2.41
592 593 4.360951 AGACAAAATCGGGGTCTGTAAA 57.639 40.909 0.00 0.00 40.21 2.01
593 594 4.721132 AGACAAAATCGGGGTCTGTAAAA 58.279 39.130 0.00 0.00 40.21 1.52
594 595 5.134661 AGACAAAATCGGGGTCTGTAAAAA 58.865 37.500 0.00 0.00 40.21 1.94
595 596 5.773176 AGACAAAATCGGGGTCTGTAAAAAT 59.227 36.000 0.00 0.00 40.21 1.82
596 597 5.778862 ACAAAATCGGGGTCTGTAAAAATG 58.221 37.500 0.00 0.00 0.00 2.32
597 598 5.303333 ACAAAATCGGGGTCTGTAAAAATGT 59.697 36.000 0.00 0.00 0.00 2.71
598 599 6.183360 ACAAAATCGGGGTCTGTAAAAATGTT 60.183 34.615 0.00 0.00 0.00 2.71
599 600 5.638596 AATCGGGGTCTGTAAAAATGTTC 57.361 39.130 0.00 0.00 0.00 3.18
600 601 4.088056 TCGGGGTCTGTAAAAATGTTCA 57.912 40.909 0.00 0.00 0.00 3.18
601 602 3.816523 TCGGGGTCTGTAAAAATGTTCAC 59.183 43.478 0.00 0.00 0.00 3.18
602 603 3.818773 CGGGGTCTGTAAAAATGTTCACT 59.181 43.478 0.00 0.00 0.00 3.41
603 604 4.320202 CGGGGTCTGTAAAAATGTTCACTG 60.320 45.833 0.00 0.00 0.00 3.66
604 605 4.583073 GGGGTCTGTAAAAATGTTCACTGT 59.417 41.667 0.00 0.00 0.00 3.55
605 606 5.068591 GGGGTCTGTAAAAATGTTCACTGTT 59.931 40.000 0.00 0.00 0.00 3.16
606 607 6.206498 GGGTCTGTAAAAATGTTCACTGTTC 58.794 40.000 0.00 0.00 0.00 3.18
607 608 6.183360 GGGTCTGTAAAAATGTTCACTGTTCA 60.183 38.462 0.00 0.00 0.00 3.18
608 609 6.691388 GGTCTGTAAAAATGTTCACTGTTCAC 59.309 38.462 0.00 0.00 0.00 3.18
609 610 6.410914 GTCTGTAAAAATGTTCACTGTTCACG 59.589 38.462 0.00 0.00 0.00 4.35
610 611 5.574082 TGTAAAAATGTTCACTGTTCACGG 58.426 37.500 0.00 0.00 0.00 4.94
611 612 4.974368 AAAAATGTTCACTGTTCACGGA 57.026 36.364 0.00 0.00 0.00 4.69
612 613 3.963383 AAATGTTCACTGTTCACGGAC 57.037 42.857 0.00 0.00 0.00 4.79
613 614 2.910688 ATGTTCACTGTTCACGGACT 57.089 45.000 0.00 0.00 0.00 3.85
614 615 1.934589 TGTTCACTGTTCACGGACTG 58.065 50.000 0.00 0.00 0.00 3.51
615 616 1.206132 TGTTCACTGTTCACGGACTGT 59.794 47.619 0.00 0.00 32.76 3.55
616 617 2.277084 GTTCACTGTTCACGGACTGTT 58.723 47.619 0.00 0.00 30.52 3.16
617 618 2.676342 GTTCACTGTTCACGGACTGTTT 59.324 45.455 0.00 0.00 30.52 2.83
618 619 2.980568 TCACTGTTCACGGACTGTTTT 58.019 42.857 0.00 0.00 30.52 2.43
619 620 2.675844 TCACTGTTCACGGACTGTTTTG 59.324 45.455 0.00 0.00 30.52 2.44
620 621 2.675844 CACTGTTCACGGACTGTTTTGA 59.324 45.455 0.00 0.00 30.52 2.69
621 622 2.676342 ACTGTTCACGGACTGTTTTGAC 59.324 45.455 0.00 0.00 0.00 3.18
622 623 2.011222 TGTTCACGGACTGTTTTGACC 58.989 47.619 0.00 0.00 0.00 4.02
623 624 1.332686 GTTCACGGACTGTTTTGACCC 59.667 52.381 0.00 0.00 0.00 4.46
624 625 0.531090 TCACGGACTGTTTTGACCCG 60.531 55.000 0.00 0.00 45.09 5.28
625 626 0.531090 CACGGACTGTTTTGACCCGA 60.531 55.000 9.90 0.00 42.49 5.14
626 627 0.395312 ACGGACTGTTTTGACCCGAT 59.605 50.000 9.90 0.00 42.49 4.18
627 628 1.202722 ACGGACTGTTTTGACCCGATT 60.203 47.619 9.90 0.00 42.49 3.34
628 629 1.877443 CGGACTGTTTTGACCCGATTT 59.123 47.619 0.00 0.00 42.49 2.17
629 630 2.350388 CGGACTGTTTTGACCCGATTTG 60.350 50.000 0.00 0.00 42.49 2.32
630 631 2.621526 GGACTGTTTTGACCCGATTTGT 59.378 45.455 0.00 0.00 0.00 2.83
631 632 3.304458 GGACTGTTTTGACCCGATTTGTC 60.304 47.826 0.00 0.00 0.00 3.18
632 633 3.551846 ACTGTTTTGACCCGATTTGTCT 58.448 40.909 0.00 0.00 33.83 3.41
633 634 3.951680 ACTGTTTTGACCCGATTTGTCTT 59.048 39.130 0.00 0.00 33.83 3.01
634 635 4.401202 ACTGTTTTGACCCGATTTGTCTTT 59.599 37.500 0.00 0.00 33.83 2.52
635 636 5.105513 ACTGTTTTGACCCGATTTGTCTTTT 60.106 36.000 0.00 0.00 33.83 2.27
636 637 5.725362 TGTTTTGACCCGATTTGTCTTTTT 58.275 33.333 0.00 0.00 33.83 1.94
652 653 2.831685 TTTTTGCCGAGAGCTACTCA 57.168 45.000 11.93 0.00 45.14 3.41
653 654 2.831685 TTTTGCCGAGAGCTACTCAA 57.168 45.000 11.93 3.64 45.14 3.02
654 655 2.831685 TTTGCCGAGAGCTACTCAAA 57.168 45.000 11.93 8.05 45.14 2.69
655 656 3.334583 TTTGCCGAGAGCTACTCAAAT 57.665 42.857 11.93 0.00 45.14 2.32
656 657 2.299993 TGCCGAGAGCTACTCAAATG 57.700 50.000 11.93 1.60 45.14 2.32
657 658 1.550524 TGCCGAGAGCTACTCAAATGT 59.449 47.619 11.93 0.00 45.14 2.71
658 659 2.028112 TGCCGAGAGCTACTCAAATGTT 60.028 45.455 11.93 0.00 45.14 2.71
659 660 2.605366 GCCGAGAGCTACTCAAATGTTC 59.395 50.000 11.93 0.00 45.14 3.18
660 661 3.849911 CCGAGAGCTACTCAAATGTTCA 58.150 45.455 11.93 0.00 45.14 3.18
661 662 4.245660 CCGAGAGCTACTCAAATGTTCAA 58.754 43.478 11.93 0.00 45.14 2.69
662 663 4.690748 CCGAGAGCTACTCAAATGTTCAAA 59.309 41.667 11.93 0.00 45.14 2.69
663 664 5.352569 CCGAGAGCTACTCAAATGTTCAAAT 59.647 40.000 11.93 0.00 45.14 2.32
664 665 6.535150 CCGAGAGCTACTCAAATGTTCAAATA 59.465 38.462 11.93 0.00 45.14 1.40
665 666 7.064609 CCGAGAGCTACTCAAATGTTCAAATAA 59.935 37.037 11.93 0.00 45.14 1.40
666 667 8.113062 CGAGAGCTACTCAAATGTTCAAATAAG 58.887 37.037 11.93 0.00 45.14 1.73
667 668 8.854614 AGAGCTACTCAAATGTTCAAATAAGT 57.145 30.769 0.00 0.00 32.06 2.24
668 669 9.289782 AGAGCTACTCAAATGTTCAAATAAGTT 57.710 29.630 0.00 0.00 32.06 2.66
669 670 9.334693 GAGCTACTCAAATGTTCAAATAAGTTG 57.665 33.333 0.00 0.00 38.71 3.16
670 671 9.066892 AGCTACTCAAATGTTCAAATAAGTTGA 57.933 29.630 0.00 0.00 44.74 3.18
682 683 6.155827 TCAAATAAGTTGAAATTTGGAGCGG 58.844 36.000 0.00 0.00 43.43 5.52
683 684 5.975693 AATAAGTTGAAATTTGGAGCGGA 57.024 34.783 0.00 0.00 0.00 5.54
684 685 6.530019 AATAAGTTGAAATTTGGAGCGGAT 57.470 33.333 0.00 0.00 0.00 4.18
685 686 4.440839 AAGTTGAAATTTGGAGCGGATC 57.559 40.909 0.00 0.00 0.00 3.36
686 687 3.690460 AGTTGAAATTTGGAGCGGATCT 58.310 40.909 0.00 0.00 0.00 2.75
687 688 3.691609 AGTTGAAATTTGGAGCGGATCTC 59.308 43.478 0.00 0.00 41.15 2.75
688 689 3.348647 TGAAATTTGGAGCGGATCTCA 57.651 42.857 0.00 0.00 43.70 3.27
689 690 3.009723 TGAAATTTGGAGCGGATCTCAC 58.990 45.455 0.00 0.00 43.70 3.51
690 691 1.656652 AATTTGGAGCGGATCTCACG 58.343 50.000 0.00 0.00 43.70 4.35
697 698 4.162640 CGGATCTCACGCGACAAA 57.837 55.556 15.93 0.00 0.00 2.83
698 699 2.665777 CGGATCTCACGCGACAAAT 58.334 52.632 15.93 0.00 0.00 2.32
699 700 0.999406 CGGATCTCACGCGACAAATT 59.001 50.000 15.93 0.00 0.00 1.82
700 701 2.190161 CGGATCTCACGCGACAAATTA 58.810 47.619 15.93 0.00 0.00 1.40
701 702 2.794910 CGGATCTCACGCGACAAATTAT 59.205 45.455 15.93 0.00 0.00 1.28
702 703 3.121328 CGGATCTCACGCGACAAATTATC 60.121 47.826 15.93 6.07 0.00 1.75
703 704 4.051922 GGATCTCACGCGACAAATTATCT 58.948 43.478 15.93 0.00 0.00 1.98
704 705 5.220381 GGATCTCACGCGACAAATTATCTA 58.780 41.667 15.93 0.00 0.00 1.98
705 706 5.864474 GGATCTCACGCGACAAATTATCTAT 59.136 40.000 15.93 0.00 0.00 1.98
706 707 6.034044 GGATCTCACGCGACAAATTATCTATC 59.966 42.308 15.93 0.15 0.00 2.08
707 708 5.827666 TCTCACGCGACAAATTATCTATCA 58.172 37.500 15.93 0.00 0.00 2.15
708 709 5.685954 TCTCACGCGACAAATTATCTATCAC 59.314 40.000 15.93 0.00 0.00 3.06
709 710 5.344884 TCACGCGACAAATTATCTATCACA 58.655 37.500 15.93 0.00 0.00 3.58
710 711 5.231357 TCACGCGACAAATTATCTATCACAC 59.769 40.000 15.93 0.00 0.00 3.82
711 712 5.005299 CACGCGACAAATTATCTATCACACA 59.995 40.000 15.93 0.00 0.00 3.72
712 713 5.579119 ACGCGACAAATTATCTATCACACAA 59.421 36.000 15.93 0.00 0.00 3.33
713 714 6.091577 ACGCGACAAATTATCTATCACACAAA 59.908 34.615 15.93 0.00 0.00 2.83
714 715 6.958752 CGCGACAAATTATCTATCACACAAAA 59.041 34.615 0.00 0.00 0.00 2.44
715 716 7.480229 CGCGACAAATTATCTATCACACAAAAA 59.520 33.333 0.00 0.00 0.00 1.94
768 769 7.636259 TTATTTTGATTTTGTTTCTGAGCGG 57.364 32.000 0.00 0.00 0.00 5.52
769 770 3.641437 TTGATTTTGTTTCTGAGCGGG 57.359 42.857 0.00 0.00 0.00 6.13
770 771 2.857483 TGATTTTGTTTCTGAGCGGGA 58.143 42.857 0.00 0.00 0.00 5.14
771 772 2.813754 TGATTTTGTTTCTGAGCGGGAG 59.186 45.455 0.00 0.00 0.00 4.30
783 784 2.108566 CGGGAGCAGATGAGCCTG 59.891 66.667 0.00 0.00 37.23 4.85
784 785 2.509916 GGGAGCAGATGAGCCTGG 59.490 66.667 0.00 0.00 34.82 4.45
785 786 2.509916 GGAGCAGATGAGCCTGGG 59.490 66.667 0.00 0.00 34.82 4.45
786 787 2.203181 GAGCAGATGAGCCTGGGC 60.203 66.667 3.00 3.00 42.33 5.36
787 788 3.013327 AGCAGATGAGCCTGGGCA 61.013 61.111 14.39 0.00 44.88 5.36
788 789 2.827642 GCAGATGAGCCTGGGCAC 60.828 66.667 14.39 8.23 44.88 5.01
802 803 1.534729 GGGCACCGAATTGGATATCC 58.465 55.000 15.39 15.39 40.86 2.59
803 804 1.156736 GGCACCGAATTGGATATCCG 58.843 55.000 17.04 4.42 42.00 4.18
804 805 1.270625 GGCACCGAATTGGATATCCGA 60.271 52.381 14.37 14.37 42.00 4.55
805 806 2.615493 GGCACCGAATTGGATATCCGAT 60.615 50.000 17.71 17.71 41.91 4.18
815 816 8.223769 CGAATTGGATATCCGATAAACAAGAAG 58.776 37.037 22.67 5.42 39.20 2.85
816 817 8.980481 AATTGGATATCCGATAAACAAGAAGT 57.020 30.769 22.67 2.74 39.20 3.01
888 893 9.846725 AAACTAATAAAAAGGGGGAAATCCTTA 57.153 29.630 0.00 0.00 43.24 2.69
890 895 7.842743 ACTAATAAAAAGGGGGAAATCCTTACC 59.157 37.037 0.00 0.40 43.24 2.85
896 902 4.425772 AGGGGGAAATCCTTACCAAAAAG 58.574 43.478 0.00 0.00 37.25 2.27
950 956 3.502211 ACCAGCAAGCAAACACATACTAC 59.498 43.478 0.00 0.00 0.00 2.73
960 966 9.627123 AAGCAAACACATACTACCACAATATAT 57.373 29.630 0.00 0.00 0.00 0.86
1014 1020 1.608283 CCCCTCTTCTTCGCGTTTCTT 60.608 52.381 5.77 0.00 0.00 2.52
1064 1070 1.533753 CCTTCCCCAAGCCAAGCAA 60.534 57.895 0.00 0.00 0.00 3.91
1066 1072 0.319405 CTTCCCCAAGCCAAGCAAAG 59.681 55.000 0.00 0.00 0.00 2.77
1236 1554 3.829044 CCGCCGATGTACCGACCA 61.829 66.667 0.00 0.00 0.00 4.02
1982 2300 3.124066 GGTAGGGAGAGGAGGGATTTTT 58.876 50.000 0.00 0.00 0.00 1.94
2114 2435 2.028658 TGTCACAAGCAAAAACAAGCCA 60.029 40.909 0.00 0.00 0.00 4.75
2327 2665 5.656549 TTCCTTTTTGGTTTCTCTCCCTA 57.343 39.130 0.00 0.00 37.07 3.53
2336 2674 2.301009 GTTTCTCTCCCTACCGTTTCCA 59.699 50.000 0.00 0.00 0.00 3.53
2350 2688 4.202367 ACCGTTTCCACAATCTCTCTTCTT 60.202 41.667 0.00 0.00 0.00 2.52
2356 2694 5.328565 TCCACAATCTCTCTTCTTCTCTCA 58.671 41.667 0.00 0.00 0.00 3.27
2359 2697 6.275335 CACAATCTCTCTTCTTCTCTCATCC 58.725 44.000 0.00 0.00 0.00 3.51
2360 2698 5.067674 ACAATCTCTCTTCTTCTCTCATCCG 59.932 44.000 0.00 0.00 0.00 4.18
2361 2699 3.550820 TCTCTCTTCTTCTCTCATCCGG 58.449 50.000 0.00 0.00 0.00 5.14
2362 2700 2.622942 CTCTCTTCTTCTCTCATCCGGG 59.377 54.545 0.00 0.00 0.00 5.73
2363 2701 1.686052 CTCTTCTTCTCTCATCCGGGG 59.314 57.143 0.00 0.00 0.00 5.73
2364 2702 1.288037 TCTTCTTCTCTCATCCGGGGA 59.712 52.381 0.00 0.00 0.00 4.81
2365 2703 2.111384 CTTCTTCTCTCATCCGGGGAA 58.889 52.381 0.00 0.00 0.00 3.97
2366 2704 1.486211 TCTTCTCTCATCCGGGGAAC 58.514 55.000 0.00 0.00 0.00 3.62
2451 2789 2.908015 GGCTTCCGGGACAGCATA 59.092 61.111 23.35 0.00 37.81 3.14
2452 2790 1.451936 GGCTTCCGGGACAGCATAT 59.548 57.895 23.35 0.00 37.81 1.78
2453 2791 0.685097 GGCTTCCGGGACAGCATATA 59.315 55.000 23.35 0.00 37.81 0.86
2597 2947 3.699894 CGCTCCAGTCCAGTGCCT 61.700 66.667 0.00 0.00 0.00 4.75
2667 3017 1.300931 TGACAACCGCTGAGTGCTC 60.301 57.895 0.00 0.00 40.11 4.26
2694 3044 4.639310 GTGGTAGTACAATCCGAGAGAGAA 59.361 45.833 2.06 0.00 0.00 2.87
2698 3048 3.630312 AGTACAATCCGAGAGAGAAGAGC 59.370 47.826 0.00 0.00 0.00 4.09
2706 3056 4.221703 TCCGAGAGAGAAGAGCTGATTTTT 59.778 41.667 0.00 0.00 0.00 1.94
2707 3057 5.419155 TCCGAGAGAGAAGAGCTGATTTTTA 59.581 40.000 0.00 0.00 0.00 1.52
2747 3097 4.471386 CCAGAAGAAAGGAGATAAGGGACA 59.529 45.833 0.00 0.00 0.00 4.02
2809 3159 1.278985 TGAGGTGTGAATGCTGGGTAG 59.721 52.381 0.00 0.00 0.00 3.18
2867 3217 2.803956 GCATACGCCATACATAACGGTT 59.196 45.455 0.00 0.00 0.00 4.44
2924 3274 2.317609 GCGAGCAACGGAAGAAGCA 61.318 57.895 5.57 0.00 42.83 3.91
2932 3282 3.797039 CAACGGAAGAAGCAGGATGATA 58.203 45.455 0.00 0.00 39.69 2.15
2938 3288 5.495640 GGAAGAAGCAGGATGATAATAGGG 58.504 45.833 0.00 0.00 39.69 3.53
2946 3296 5.431765 CAGGATGATAATAGGGGTATGCAC 58.568 45.833 0.00 0.00 39.69 4.57
2950 3300 1.724545 TAATAGGGGTATGCACGGCT 58.275 50.000 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.662961 TGGTGGTCGAGCGCAGTG 62.663 66.667 27.38 0.00 0.00 3.66
10 11 4.664677 GTGGTGGTCGAGCGCAGT 62.665 66.667 27.38 0.00 32.55 4.40
11 12 3.939837 ATGTGGTGGTCGAGCGCAG 62.940 63.158 27.38 2.69 45.37 5.18
12 13 4.002506 ATGTGGTGGTCGAGCGCA 62.003 61.111 27.38 15.19 46.18 6.09
13 14 3.490759 CATGTGGTGGTCGAGCGC 61.491 66.667 19.49 19.49 0.00 5.92
14 15 3.490759 GCATGTGGTGGTCGAGCG 61.491 66.667 10.46 0.00 0.00 5.03
15 16 3.490759 CGCATGTGGTGGTCGAGC 61.491 66.667 7.89 7.89 0.00 5.03
16 17 2.815211 CCGCATGTGGTGGTCGAG 60.815 66.667 17.59 0.00 42.49 4.04
125 126 4.292178 CTCTCGGATCCAGGGCGC 62.292 72.222 13.41 0.00 0.00 6.53
126 127 4.292178 GCTCTCGGATCCAGGGCG 62.292 72.222 16.96 5.03 0.00 6.13
127 128 3.934962 GGCTCTCGGATCCAGGGC 61.935 72.222 21.38 21.38 36.53 5.19
128 129 1.753368 GAAGGCTCTCGGATCCAGGG 61.753 65.000 13.41 9.48 0.00 4.45
129 130 1.745264 GAAGGCTCTCGGATCCAGG 59.255 63.158 13.41 3.45 0.00 4.45
130 131 1.361993 CGAAGGCTCTCGGATCCAG 59.638 63.158 13.41 8.62 35.14 3.86
131 132 2.786495 GCGAAGGCTCTCGGATCCA 61.786 63.158 13.41 0.00 39.27 3.41
132 133 2.028337 GCGAAGGCTCTCGGATCC 59.972 66.667 16.73 0.00 39.27 3.36
133 134 2.337749 TTCGCGAAGGCTCTCGGATC 62.338 60.000 19.38 0.00 39.27 3.36
134 135 2.343163 CTTCGCGAAGGCTCTCGGAT 62.343 60.000 35.58 0.00 39.27 4.18
135 136 3.052620 CTTCGCGAAGGCTCTCGGA 62.053 63.158 35.58 5.27 39.27 4.55
136 137 2.543687 TTCTTCGCGAAGGCTCTCGG 62.544 60.000 39.79 19.45 39.27 4.63
137 138 1.136872 CTTCTTCGCGAAGGCTCTCG 61.137 60.000 39.79 20.14 44.37 4.04
138 139 2.659740 CTTCTTCGCGAAGGCTCTC 58.340 57.895 39.79 0.00 44.37 3.20
139 140 4.900154 CTTCTTCGCGAAGGCTCT 57.100 55.556 39.79 0.00 44.37 4.09
149 150 2.103042 CCTTGGCGCTCCTTCTTCG 61.103 63.158 7.64 0.00 0.00 3.79
150 151 1.021920 GTCCTTGGCGCTCCTTCTTC 61.022 60.000 7.64 0.00 0.00 2.87
151 152 1.003233 GTCCTTGGCGCTCCTTCTT 60.003 57.895 7.64 0.00 0.00 2.52
152 153 2.665603 GTCCTTGGCGCTCCTTCT 59.334 61.111 7.64 0.00 0.00 2.85
153 154 2.436824 GGTCCTTGGCGCTCCTTC 60.437 66.667 7.64 0.00 0.00 3.46
154 155 4.035102 GGGTCCTTGGCGCTCCTT 62.035 66.667 7.64 0.00 0.00 3.36
199 200 1.877165 GACGATCGTCGGGAAAGCC 60.877 63.158 30.46 7.26 45.59 4.35
200 201 3.689411 GACGATCGTCGGGAAAGC 58.311 61.111 30.46 8.01 45.59 3.51
208 209 1.226717 GCCACTGGAGACGATCGTC 60.227 63.158 35.26 35.26 44.86 4.20
209 210 2.711922 GGCCACTGGAGACGATCGT 61.712 63.158 22.97 22.97 0.00 3.73
210 211 2.105128 GGCCACTGGAGACGATCG 59.895 66.667 14.88 14.88 0.00 3.69
211 212 2.105128 CGGCCACTGGAGACGATC 59.895 66.667 2.24 0.00 0.00 3.69
212 213 4.148825 GCGGCCACTGGAGACGAT 62.149 66.667 2.24 0.00 0.00 3.73
215 216 4.803426 CTCGCGGCCACTGGAGAC 62.803 72.222 6.13 0.00 0.00 3.36
253 254 2.836360 TAGGGTTAGCCTCCGCCG 60.836 66.667 6.12 0.00 34.57 6.46
254 255 1.746322 GACTAGGGTTAGCCTCCGCC 61.746 65.000 6.12 0.00 34.57 6.13
255 256 1.740905 GACTAGGGTTAGCCTCCGC 59.259 63.158 6.12 0.00 34.45 5.54
256 257 2.031360 CGACTAGGGTTAGCCTCCG 58.969 63.158 6.12 5.86 34.45 4.63
257 258 1.740905 GCGACTAGGGTTAGCCTCC 59.259 63.158 6.12 0.00 34.45 4.30
258 259 1.740905 GGCGACTAGGGTTAGCCTC 59.259 63.158 6.12 0.00 42.25 4.70
259 260 1.761271 GGGCGACTAGGGTTAGCCT 60.761 63.158 8.42 8.42 43.76 4.58
260 261 2.804912 GGGGCGACTAGGGTTAGCC 61.805 68.421 0.00 0.00 43.64 3.93
261 262 2.820261 GGGGCGACTAGGGTTAGC 59.180 66.667 0.00 0.00 0.00 3.09
262 263 1.453762 CTCGGGGCGACTAGGGTTAG 61.454 65.000 0.00 0.00 0.00 2.34
263 264 1.454479 CTCGGGGCGACTAGGGTTA 60.454 63.158 0.00 0.00 0.00 2.85
264 265 2.758737 CTCGGGGCGACTAGGGTT 60.759 66.667 0.00 0.00 0.00 4.11
265 266 4.057943 ACTCGGGGCGACTAGGGT 62.058 66.667 0.00 0.00 0.00 4.34
266 267 3.217743 GACTCGGGGCGACTAGGG 61.218 72.222 0.00 0.00 0.00 3.53
267 268 3.584052 CGACTCGGGGCGACTAGG 61.584 72.222 3.05 0.00 0.00 3.02
268 269 4.253257 GCGACTCGGGGCGACTAG 62.253 72.222 18.99 0.00 0.00 2.57
300 301 4.862823 CCCCCTCCTCCGTCCCTC 62.863 77.778 0.00 0.00 0.00 4.30
302 303 4.410033 TTCCCCCTCCTCCGTCCC 62.410 72.222 0.00 0.00 0.00 4.46
303 304 2.764547 CTTCCCCCTCCTCCGTCC 60.765 72.222 0.00 0.00 0.00 4.79
304 305 3.471806 GCTTCCCCCTCCTCCGTC 61.472 72.222 0.00 0.00 0.00 4.79
306 307 4.806339 AGGCTTCCCCCTCCTCCG 62.806 72.222 0.00 0.00 0.00 4.63
307 308 3.093172 CAGGCTTCCCCCTCCTCC 61.093 72.222 0.00 0.00 31.24 4.30
308 309 3.803162 GCAGGCTTCCCCCTCCTC 61.803 72.222 0.00 0.00 31.24 3.71
311 312 2.520657 AATTGGCAGGCTTCCCCCTC 62.521 60.000 0.00 0.00 31.24 4.30
312 313 2.110782 AAATTGGCAGGCTTCCCCCT 62.111 55.000 0.00 0.00 34.93 4.79
313 314 1.613332 AAATTGGCAGGCTTCCCCC 60.613 57.895 0.00 0.00 0.00 5.40
314 315 0.904394 TCAAATTGGCAGGCTTCCCC 60.904 55.000 0.00 0.00 0.00 4.81
315 316 0.975887 TTCAAATTGGCAGGCTTCCC 59.024 50.000 0.00 0.00 0.00 3.97
316 317 2.234414 TCATTCAAATTGGCAGGCTTCC 59.766 45.455 0.00 0.00 0.00 3.46
317 318 3.598019 TCATTCAAATTGGCAGGCTTC 57.402 42.857 0.00 0.00 0.00 3.86
318 319 3.773119 AGATCATTCAAATTGGCAGGCTT 59.227 39.130 0.00 0.00 0.00 4.35
319 320 3.371965 AGATCATTCAAATTGGCAGGCT 58.628 40.909 0.00 0.00 0.00 4.58
320 321 3.131577 TGAGATCATTCAAATTGGCAGGC 59.868 43.478 0.00 0.00 0.00 4.85
321 322 4.679662 GTGAGATCATTCAAATTGGCAGG 58.320 43.478 0.00 0.00 0.00 4.85
322 323 4.348656 CGTGAGATCATTCAAATTGGCAG 58.651 43.478 0.00 0.00 0.00 4.85
323 324 3.129113 CCGTGAGATCATTCAAATTGGCA 59.871 43.478 0.00 0.00 0.00 4.92
324 325 3.129287 ACCGTGAGATCATTCAAATTGGC 59.871 43.478 0.00 0.00 0.00 4.52
325 326 4.637534 AGACCGTGAGATCATTCAAATTGG 59.362 41.667 0.00 0.00 0.00 3.16
326 327 5.808042 AGACCGTGAGATCATTCAAATTG 57.192 39.130 0.00 0.00 0.00 2.32
327 328 6.758886 GTCTAGACCGTGAGATCATTCAAATT 59.241 38.462 12.13 0.00 0.00 1.82
328 329 6.097554 AGTCTAGACCGTGAGATCATTCAAAT 59.902 38.462 19.38 0.00 0.00 2.32
329 330 5.419155 AGTCTAGACCGTGAGATCATTCAAA 59.581 40.000 19.38 0.00 0.00 2.69
330 331 4.950475 AGTCTAGACCGTGAGATCATTCAA 59.050 41.667 19.38 0.00 0.00 2.69
331 332 4.527944 AGTCTAGACCGTGAGATCATTCA 58.472 43.478 19.38 0.00 0.00 2.57
332 333 5.334569 GCTAGTCTAGACCGTGAGATCATTC 60.335 48.000 19.38 0.00 0.00 2.67
333 334 4.517453 GCTAGTCTAGACCGTGAGATCATT 59.483 45.833 19.38 0.00 0.00 2.57
334 335 4.069304 GCTAGTCTAGACCGTGAGATCAT 58.931 47.826 19.38 0.00 0.00 2.45
335 336 3.134985 AGCTAGTCTAGACCGTGAGATCA 59.865 47.826 19.38 0.00 0.00 2.92
336 337 3.735591 AGCTAGTCTAGACCGTGAGATC 58.264 50.000 19.38 1.05 0.00 2.75
337 338 3.849563 AGCTAGTCTAGACCGTGAGAT 57.150 47.619 19.38 7.81 0.00 2.75
338 339 3.959449 TCTAGCTAGTCTAGACCGTGAGA 59.041 47.826 19.38 12.49 46.58 3.27
339 340 4.325028 TCTAGCTAGTCTAGACCGTGAG 57.675 50.000 19.38 12.26 46.58 3.51
347 348 5.186942 TGTGTGGAGTTCTAGCTAGTCTAG 58.813 45.833 20.10 12.42 44.90 2.43
348 349 5.175388 TGTGTGGAGTTCTAGCTAGTCTA 57.825 43.478 20.10 6.25 0.00 2.59
349 350 4.035612 TGTGTGGAGTTCTAGCTAGTCT 57.964 45.455 20.10 18.06 0.00 3.24
350 351 4.785511 TTGTGTGGAGTTCTAGCTAGTC 57.214 45.455 20.10 14.05 0.00 2.59
351 352 4.142359 CGATTGTGTGGAGTTCTAGCTAGT 60.142 45.833 20.10 0.97 0.00 2.57
352 353 4.355437 CGATTGTGTGGAGTTCTAGCTAG 58.645 47.826 15.01 15.01 0.00 3.42
353 354 3.428999 GCGATTGTGTGGAGTTCTAGCTA 60.429 47.826 0.00 0.00 0.00 3.32
354 355 2.675317 GCGATTGTGTGGAGTTCTAGCT 60.675 50.000 0.00 0.00 0.00 3.32
355 356 1.661112 GCGATTGTGTGGAGTTCTAGC 59.339 52.381 0.00 0.00 0.00 3.42
356 357 2.668457 GTGCGATTGTGTGGAGTTCTAG 59.332 50.000 0.00 0.00 0.00 2.43
357 358 2.036604 TGTGCGATTGTGTGGAGTTCTA 59.963 45.455 0.00 0.00 0.00 2.10
358 359 1.202639 TGTGCGATTGTGTGGAGTTCT 60.203 47.619 0.00 0.00 0.00 3.01
359 360 1.225855 TGTGCGATTGTGTGGAGTTC 58.774 50.000 0.00 0.00 0.00 3.01
360 361 1.896220 ATGTGCGATTGTGTGGAGTT 58.104 45.000 0.00 0.00 0.00 3.01
361 362 1.896220 AATGTGCGATTGTGTGGAGT 58.104 45.000 0.00 0.00 0.00 3.85
362 363 3.002791 ACTAATGTGCGATTGTGTGGAG 58.997 45.455 0.00 0.00 0.00 3.86
363 364 3.052455 ACTAATGTGCGATTGTGTGGA 57.948 42.857 0.00 0.00 0.00 4.02
364 365 4.332543 ACATACTAATGTGCGATTGTGTGG 59.667 41.667 0.00 0.00 44.79 4.17
365 366 5.469373 ACATACTAATGTGCGATTGTGTG 57.531 39.130 0.00 0.00 44.79 3.82
366 367 5.641636 TCAACATACTAATGTGCGATTGTGT 59.358 36.000 0.00 0.00 45.79 3.72
367 368 6.035975 TCTCAACATACTAATGTGCGATTGTG 59.964 38.462 0.00 0.00 45.79 3.33
368 369 6.106003 TCTCAACATACTAATGTGCGATTGT 58.894 36.000 0.00 0.00 45.79 2.71
369 370 6.588348 TCTCAACATACTAATGTGCGATTG 57.412 37.500 0.00 0.00 45.79 2.67
370 371 7.609760 TTTCTCAACATACTAATGTGCGATT 57.390 32.000 0.00 0.00 45.79 3.34
371 372 7.609760 TTTTCTCAACATACTAATGTGCGAT 57.390 32.000 0.00 0.00 45.79 4.58
372 373 6.402118 GCTTTTCTCAACATACTAATGTGCGA 60.402 38.462 0.00 0.00 45.79 5.10
373 374 5.734498 GCTTTTCTCAACATACTAATGTGCG 59.266 40.000 0.00 0.00 45.79 5.34
374 375 6.611381 TGCTTTTCTCAACATACTAATGTGC 58.389 36.000 0.00 0.00 45.79 4.57
381 382 8.299570 CCTTGTTTATGCTTTTCTCAACATACT 58.700 33.333 0.00 0.00 0.00 2.12
382 383 7.542130 CCCTTGTTTATGCTTTTCTCAACATAC 59.458 37.037 0.00 0.00 0.00 2.39
383 384 7.450014 TCCCTTGTTTATGCTTTTCTCAACATA 59.550 33.333 0.00 0.00 0.00 2.29
384 385 6.267471 TCCCTTGTTTATGCTTTTCTCAACAT 59.733 34.615 0.00 0.00 0.00 2.71
385 386 5.596361 TCCCTTGTTTATGCTTTTCTCAACA 59.404 36.000 0.00 0.00 0.00 3.33
386 387 5.920840 GTCCCTTGTTTATGCTTTTCTCAAC 59.079 40.000 0.00 0.00 0.00 3.18
387 388 5.278266 CGTCCCTTGTTTATGCTTTTCTCAA 60.278 40.000 0.00 0.00 0.00 3.02
388 389 4.215399 CGTCCCTTGTTTATGCTTTTCTCA 59.785 41.667 0.00 0.00 0.00 3.27
389 390 4.723248 CGTCCCTTGTTTATGCTTTTCTC 58.277 43.478 0.00 0.00 0.00 2.87
390 391 3.057526 GCGTCCCTTGTTTATGCTTTTCT 60.058 43.478 0.00 0.00 0.00 2.52
391 392 3.242518 GCGTCCCTTGTTTATGCTTTTC 58.757 45.455 0.00 0.00 0.00 2.29
392 393 2.351350 CGCGTCCCTTGTTTATGCTTTT 60.351 45.455 0.00 0.00 0.00 2.27
393 394 1.199097 CGCGTCCCTTGTTTATGCTTT 59.801 47.619 0.00 0.00 0.00 3.51
394 395 0.802494 CGCGTCCCTTGTTTATGCTT 59.198 50.000 0.00 0.00 0.00 3.91
395 396 1.024579 CCGCGTCCCTTGTTTATGCT 61.025 55.000 4.92 0.00 0.00 3.79
396 397 1.022451 TCCGCGTCCCTTGTTTATGC 61.022 55.000 4.92 0.00 0.00 3.14
397 398 1.006832 CTCCGCGTCCCTTGTTTATG 58.993 55.000 4.92 0.00 0.00 1.90
398 399 0.611714 ACTCCGCGTCCCTTGTTTAT 59.388 50.000 4.92 0.00 0.00 1.40
399 400 0.393820 AACTCCGCGTCCCTTGTTTA 59.606 50.000 4.92 0.00 0.00 2.01
400 401 0.464916 AAACTCCGCGTCCCTTGTTT 60.465 50.000 4.92 4.15 0.00 2.83
401 402 0.464916 AAAACTCCGCGTCCCTTGTT 60.465 50.000 4.92 0.00 0.00 2.83
402 403 1.147600 AAAACTCCGCGTCCCTTGT 59.852 52.632 4.92 0.00 0.00 3.16
403 404 1.574428 CAAAACTCCGCGTCCCTTG 59.426 57.895 4.92 0.00 0.00 3.61
404 405 1.599797 CCAAAACTCCGCGTCCCTT 60.600 57.895 4.92 0.00 0.00 3.95
405 406 2.032071 CCAAAACTCCGCGTCCCT 59.968 61.111 4.92 0.00 0.00 4.20
406 407 3.733960 GCCAAAACTCCGCGTCCC 61.734 66.667 4.92 0.00 0.00 4.46
407 408 2.668550 AGCCAAAACTCCGCGTCC 60.669 61.111 4.92 0.00 0.00 4.79
408 409 2.677979 GGAGCCAAAACTCCGCGTC 61.678 63.158 4.92 0.00 46.52 5.19
409 410 2.668550 GGAGCCAAAACTCCGCGT 60.669 61.111 4.92 0.00 46.52 6.01
423 424 1.227205 GTGCAGATGAGCTCGGGAG 60.227 63.158 9.64 0.30 34.99 4.30
424 425 2.725312 GGTGCAGATGAGCTCGGGA 61.725 63.158 9.64 0.00 34.99 5.14
425 426 2.202987 GGTGCAGATGAGCTCGGG 60.203 66.667 9.64 0.00 34.99 5.14
426 427 2.202987 GGGTGCAGATGAGCTCGG 60.203 66.667 9.64 0.00 34.99 4.63
427 428 1.812922 GTGGGTGCAGATGAGCTCG 60.813 63.158 9.64 0.00 34.99 5.03
428 429 1.812922 CGTGGGTGCAGATGAGCTC 60.813 63.158 6.82 6.82 34.99 4.09
429 430 2.267006 CGTGGGTGCAGATGAGCT 59.733 61.111 0.00 0.00 34.99 4.09
430 431 3.503363 GCGTGGGTGCAGATGAGC 61.503 66.667 0.00 0.00 34.15 4.26
431 432 1.812922 GAGCGTGGGTGCAGATGAG 60.813 63.158 0.00 0.00 37.31 2.90
432 433 2.265739 GAGCGTGGGTGCAGATGA 59.734 61.111 0.00 0.00 37.31 2.92
433 434 2.046988 TGAGCGTGGGTGCAGATG 60.047 61.111 0.00 0.00 37.31 2.90
434 435 1.830587 TTCTGAGCGTGGGTGCAGAT 61.831 55.000 0.00 0.00 37.25 2.90
435 436 2.038814 TTTCTGAGCGTGGGTGCAGA 62.039 55.000 0.00 0.00 37.31 4.26
436 437 1.165907 TTTTCTGAGCGTGGGTGCAG 61.166 55.000 0.00 0.00 37.31 4.41
437 438 0.749818 TTTTTCTGAGCGTGGGTGCA 60.750 50.000 0.00 0.00 37.31 4.57
438 439 2.029743 TTTTTCTGAGCGTGGGTGC 58.970 52.632 0.00 0.00 0.00 5.01
488 489 8.775527 TGCGTCAAATTATCTACTACACAAAAA 58.224 29.630 0.00 0.00 0.00 1.94
489 490 8.312896 TGCGTCAAATTATCTACTACACAAAA 57.687 30.769 0.00 0.00 0.00 2.44
490 491 7.892778 TGCGTCAAATTATCTACTACACAAA 57.107 32.000 0.00 0.00 0.00 2.83
491 492 7.762159 TCATGCGTCAAATTATCTACTACACAA 59.238 33.333 0.00 0.00 0.00 3.33
492 493 7.262048 TCATGCGTCAAATTATCTACTACACA 58.738 34.615 0.00 0.00 0.00 3.72
493 494 7.096023 CCTCATGCGTCAAATTATCTACTACAC 60.096 40.741 0.00 0.00 0.00 2.90
494 495 6.923508 CCTCATGCGTCAAATTATCTACTACA 59.076 38.462 0.00 0.00 0.00 2.74
495 496 6.924060 ACCTCATGCGTCAAATTATCTACTAC 59.076 38.462 0.00 0.00 0.00 2.73
496 497 7.050970 ACCTCATGCGTCAAATTATCTACTA 57.949 36.000 0.00 0.00 0.00 1.82
497 498 5.918608 ACCTCATGCGTCAAATTATCTACT 58.081 37.500 0.00 0.00 0.00 2.57
498 499 5.177696 GGACCTCATGCGTCAAATTATCTAC 59.822 44.000 12.92 0.00 31.55 2.59
499 500 5.297547 GGACCTCATGCGTCAAATTATCTA 58.702 41.667 12.92 0.00 31.55 1.98
500 501 4.130118 GGACCTCATGCGTCAAATTATCT 58.870 43.478 12.92 0.00 31.55 1.98
501 502 3.059597 CGGACCTCATGCGTCAAATTATC 60.060 47.826 12.92 0.00 37.38 1.75
502 503 2.872245 CGGACCTCATGCGTCAAATTAT 59.128 45.455 12.92 0.00 37.38 1.28
503 504 2.276201 CGGACCTCATGCGTCAAATTA 58.724 47.619 12.92 0.00 37.38 1.40
504 505 1.086696 CGGACCTCATGCGTCAAATT 58.913 50.000 12.92 0.00 37.38 1.82
505 506 1.369091 GCGGACCTCATGCGTCAAAT 61.369 55.000 12.92 0.00 45.35 2.32
506 507 2.032634 GCGGACCTCATGCGTCAAA 61.033 57.895 12.92 0.00 45.35 2.69
507 508 2.434185 GCGGACCTCATGCGTCAA 60.434 61.111 12.92 0.00 45.35 3.18
508 509 3.356639 GAGCGGACCTCATGCGTCA 62.357 63.158 12.92 0.00 45.35 4.35
509 510 1.725557 TAGAGCGGACCTCATGCGTC 61.726 60.000 4.62 4.62 45.35 5.19
510 511 1.320344 TTAGAGCGGACCTCATGCGT 61.320 55.000 0.00 0.00 45.35 5.24
511 512 0.179111 TTTAGAGCGGACCTCATGCG 60.179 55.000 0.00 0.00 46.53 4.73
512 513 2.246719 ATTTAGAGCGGACCTCATGC 57.753 50.000 0.00 0.00 43.31 4.06
513 514 4.191544 TGAAATTTAGAGCGGACCTCATG 58.808 43.478 0.00 0.00 43.31 3.07
514 515 4.487714 TGAAATTTAGAGCGGACCTCAT 57.512 40.909 0.00 0.00 43.31 2.90
515 516 3.973206 TGAAATTTAGAGCGGACCTCA 57.027 42.857 0.00 0.00 43.31 3.86
516 517 4.254492 AGTTGAAATTTAGAGCGGACCTC 58.746 43.478 0.00 0.00 41.07 3.85
517 518 4.254492 GAGTTGAAATTTAGAGCGGACCT 58.746 43.478 0.00 0.00 0.00 3.85
518 519 4.000988 TGAGTTGAAATTTAGAGCGGACC 58.999 43.478 0.00 0.00 0.00 4.46
519 520 5.803020 ATGAGTTGAAATTTAGAGCGGAC 57.197 39.130 0.00 0.00 0.00 4.79
520 521 6.429692 TCAAATGAGTTGAAATTTAGAGCGGA 59.570 34.615 0.00 0.00 43.43 5.54
521 522 6.611381 TCAAATGAGTTGAAATTTAGAGCGG 58.389 36.000 0.00 0.00 43.43 5.52
522 523 6.250104 GCTCAAATGAGTTGAAATTTAGAGCG 59.750 38.462 11.77 0.00 45.67 5.03
523 524 7.086376 TGCTCAAATGAGTTGAAATTTAGAGC 58.914 34.615 11.77 16.69 45.67 4.09
524 525 9.286946 GATGCTCAAATGAGTTGAAATTTAGAG 57.713 33.333 11.77 0.00 45.67 2.43
525 526 9.017509 AGATGCTCAAATGAGTTGAAATTTAGA 57.982 29.630 11.77 0.00 45.67 2.10
526 527 9.073368 CAGATGCTCAAATGAGTTGAAATTTAG 57.927 33.333 11.77 0.00 45.67 1.85
527 528 8.795513 TCAGATGCTCAAATGAGTTGAAATTTA 58.204 29.630 11.77 0.00 45.67 1.40
528 529 7.663827 TCAGATGCTCAAATGAGTTGAAATTT 58.336 30.769 11.77 0.00 45.67 1.82
529 530 7.223260 TCAGATGCTCAAATGAGTTGAAATT 57.777 32.000 11.77 0.00 45.67 1.82
530 531 6.829229 TCAGATGCTCAAATGAGTTGAAAT 57.171 33.333 11.77 0.00 45.67 2.17
531 532 6.250344 CTCAGATGCTCAAATGAGTTGAAA 57.750 37.500 11.77 0.00 45.67 2.69
532 533 5.874895 CTCAGATGCTCAAATGAGTTGAA 57.125 39.130 11.77 0.00 45.67 2.69
537 538 4.695396 AGCTACTCAGATGCTCAAATGAG 58.305 43.478 6.05 6.05 43.81 2.90
538 539 4.750021 AGCTACTCAGATGCTCAAATGA 57.250 40.909 0.00 0.00 30.41 2.57
545 546 1.317613 CCGAGAGCTACTCAGATGCT 58.682 55.000 11.93 0.00 45.14 3.79
546 547 0.318614 GCCGAGAGCTACTCAGATGC 60.319 60.000 11.93 6.28 45.14 3.91
547 548 1.028130 TGCCGAGAGCTACTCAGATG 58.972 55.000 11.93 1.60 45.14 2.90
548 549 1.769026 TTGCCGAGAGCTACTCAGAT 58.231 50.000 11.93 0.00 45.14 2.90
549 550 1.545841 TTTGCCGAGAGCTACTCAGA 58.454 50.000 11.93 0.00 45.14 3.27
550 551 2.370281 TTTTGCCGAGAGCTACTCAG 57.630 50.000 11.93 3.88 45.14 3.35
551 552 2.831685 TTTTTGCCGAGAGCTACTCA 57.168 45.000 11.93 0.00 45.14 3.41
567 568 3.958147 ACAGACCCCGATTTTGTCTTTTT 59.042 39.130 0.00 0.00 37.25 1.94
568 569 3.562182 ACAGACCCCGATTTTGTCTTTT 58.438 40.909 0.00 0.00 37.25 2.27
569 570 3.223674 ACAGACCCCGATTTTGTCTTT 57.776 42.857 0.00 0.00 37.25 2.52
570 571 2.951229 ACAGACCCCGATTTTGTCTT 57.049 45.000 0.00 0.00 37.25 3.01
571 572 4.360951 TTTACAGACCCCGATTTTGTCT 57.639 40.909 0.00 0.00 39.86 3.41
572 573 5.441709 TTTTTACAGACCCCGATTTTGTC 57.558 39.130 0.00 0.00 0.00 3.18
573 574 5.303333 ACATTTTTACAGACCCCGATTTTGT 59.697 36.000 0.00 0.00 0.00 2.83
574 575 5.778862 ACATTTTTACAGACCCCGATTTTG 58.221 37.500 0.00 0.00 0.00 2.44
575 576 6.041069 TGAACATTTTTACAGACCCCGATTTT 59.959 34.615 0.00 0.00 0.00 1.82
576 577 5.536916 TGAACATTTTTACAGACCCCGATTT 59.463 36.000 0.00 0.00 0.00 2.17
577 578 5.048294 GTGAACATTTTTACAGACCCCGATT 60.048 40.000 0.00 0.00 0.00 3.34
578 579 4.457949 GTGAACATTTTTACAGACCCCGAT 59.542 41.667 0.00 0.00 0.00 4.18
579 580 3.816523 GTGAACATTTTTACAGACCCCGA 59.183 43.478 0.00 0.00 0.00 5.14
580 581 3.818773 AGTGAACATTTTTACAGACCCCG 59.181 43.478 0.00 0.00 0.00 5.73
581 582 4.583073 ACAGTGAACATTTTTACAGACCCC 59.417 41.667 0.00 0.00 0.00 4.95
582 583 5.767816 ACAGTGAACATTTTTACAGACCC 57.232 39.130 0.00 0.00 0.00 4.46
583 584 6.691388 GTGAACAGTGAACATTTTTACAGACC 59.309 38.462 0.00 0.00 0.00 3.85
584 585 6.410914 CGTGAACAGTGAACATTTTTACAGAC 59.589 38.462 0.00 0.00 0.00 3.51
585 586 6.457663 CCGTGAACAGTGAACATTTTTACAGA 60.458 38.462 0.00 0.00 0.00 3.41
586 587 5.681105 CCGTGAACAGTGAACATTTTTACAG 59.319 40.000 0.00 0.00 0.00 2.74
587 588 5.354513 TCCGTGAACAGTGAACATTTTTACA 59.645 36.000 0.00 0.00 0.00 2.41
588 589 5.679792 GTCCGTGAACAGTGAACATTTTTAC 59.320 40.000 0.00 0.00 0.00 2.01
589 590 5.587043 AGTCCGTGAACAGTGAACATTTTTA 59.413 36.000 0.00 0.00 0.00 1.52
590 591 4.398044 AGTCCGTGAACAGTGAACATTTTT 59.602 37.500 0.00 0.00 0.00 1.94
591 592 3.945285 AGTCCGTGAACAGTGAACATTTT 59.055 39.130 0.00 0.00 0.00 1.82
592 593 3.312421 CAGTCCGTGAACAGTGAACATTT 59.688 43.478 0.00 0.00 0.00 2.32
593 594 2.872245 CAGTCCGTGAACAGTGAACATT 59.128 45.455 0.00 0.00 0.00 2.71
594 595 2.158957 ACAGTCCGTGAACAGTGAACAT 60.159 45.455 0.00 0.00 0.00 2.71
595 596 1.206132 ACAGTCCGTGAACAGTGAACA 59.794 47.619 0.00 0.00 0.00 3.18
596 597 1.935933 ACAGTCCGTGAACAGTGAAC 58.064 50.000 0.00 0.00 0.00 3.18
597 598 2.684001 AACAGTCCGTGAACAGTGAA 57.316 45.000 0.00 0.00 0.00 3.18
598 599 2.675844 CAAAACAGTCCGTGAACAGTGA 59.324 45.455 0.00 0.00 0.00 3.41
599 600 2.675844 TCAAAACAGTCCGTGAACAGTG 59.324 45.455 0.00 0.00 0.00 3.66
600 601 2.676342 GTCAAAACAGTCCGTGAACAGT 59.324 45.455 0.00 0.00 0.00 3.55
601 602 2.031683 GGTCAAAACAGTCCGTGAACAG 59.968 50.000 0.00 0.00 0.00 3.16
602 603 2.011222 GGTCAAAACAGTCCGTGAACA 58.989 47.619 0.00 0.00 0.00 3.18
603 604 1.332686 GGGTCAAAACAGTCCGTGAAC 59.667 52.381 0.00 0.00 0.00 3.18
604 605 1.670791 GGGTCAAAACAGTCCGTGAA 58.329 50.000 0.00 0.00 0.00 3.18
605 606 0.531090 CGGGTCAAAACAGTCCGTGA 60.531 55.000 0.00 0.00 36.38 4.35
606 607 0.531090 TCGGGTCAAAACAGTCCGTG 60.531 55.000 0.00 0.00 41.27 4.94
607 608 0.395312 ATCGGGTCAAAACAGTCCGT 59.605 50.000 0.00 0.00 41.27 4.69
608 609 1.519408 AATCGGGTCAAAACAGTCCG 58.481 50.000 0.00 0.00 41.80 4.79
609 610 2.621526 ACAAATCGGGTCAAAACAGTCC 59.378 45.455 0.00 0.00 0.00 3.85
610 611 3.564225 AGACAAATCGGGTCAAAACAGTC 59.436 43.478 0.00 0.00 37.74 3.51
611 612 3.551846 AGACAAATCGGGTCAAAACAGT 58.448 40.909 0.00 0.00 37.74 3.55
612 613 4.568152 AAGACAAATCGGGTCAAAACAG 57.432 40.909 0.00 0.00 37.74 3.16
613 614 4.993029 AAAGACAAATCGGGTCAAAACA 57.007 36.364 0.00 0.00 37.74 2.83
633 634 2.831685 TGAGTAGCTCTCGGCAAAAA 57.168 45.000 0.00 0.00 45.46 1.94
634 635 2.831685 TTGAGTAGCTCTCGGCAAAA 57.168 45.000 0.00 0.00 45.46 2.44
635 636 2.831685 TTTGAGTAGCTCTCGGCAAA 57.168 45.000 0.00 0.00 45.46 3.68
636 637 2.028112 ACATTTGAGTAGCTCTCGGCAA 60.028 45.455 0.00 0.00 45.46 4.52
637 638 1.550524 ACATTTGAGTAGCTCTCGGCA 59.449 47.619 0.00 0.00 45.46 5.69
638 639 2.301577 ACATTTGAGTAGCTCTCGGC 57.698 50.000 0.00 0.00 45.46 5.54
639 640 3.849911 TGAACATTTGAGTAGCTCTCGG 58.150 45.455 0.00 0.00 45.46 4.63
640 641 5.845985 TTTGAACATTTGAGTAGCTCTCG 57.154 39.130 0.00 0.00 45.46 4.04
641 642 8.940952 ACTTATTTGAACATTTGAGTAGCTCTC 58.059 33.333 0.00 0.00 43.03 3.20
642 643 8.854614 ACTTATTTGAACATTTGAGTAGCTCT 57.145 30.769 0.00 0.00 0.00 4.09
643 644 9.334693 CAACTTATTTGAACATTTGAGTAGCTC 57.665 33.333 0.00 0.00 37.39 4.09
644 645 9.066892 TCAACTTATTTGAACATTTGAGTAGCT 57.933 29.630 0.00 0.00 41.51 3.32
658 659 6.015856 TCCGCTCCAAATTTCAACTTATTTGA 60.016 34.615 8.64 0.00 41.86 2.69
659 660 6.155827 TCCGCTCCAAATTTCAACTTATTTG 58.844 36.000 0.00 0.00 40.01 2.32
660 661 6.339587 TCCGCTCCAAATTTCAACTTATTT 57.660 33.333 0.00 0.00 0.00 1.40
661 662 5.975693 TCCGCTCCAAATTTCAACTTATT 57.024 34.783 0.00 0.00 0.00 1.40
662 663 5.888161 AGATCCGCTCCAAATTTCAACTTAT 59.112 36.000 0.00 0.00 0.00 1.73
663 664 5.253330 AGATCCGCTCCAAATTTCAACTTA 58.747 37.500 0.00 0.00 0.00 2.24
664 665 4.082125 AGATCCGCTCCAAATTTCAACTT 58.918 39.130 0.00 0.00 0.00 2.66
665 666 3.690460 AGATCCGCTCCAAATTTCAACT 58.310 40.909 0.00 0.00 0.00 3.16
666 667 3.440173 TGAGATCCGCTCCAAATTTCAAC 59.560 43.478 0.00 0.00 43.26 3.18
667 668 3.440173 GTGAGATCCGCTCCAAATTTCAA 59.560 43.478 0.00 0.00 43.26 2.69
668 669 3.009723 GTGAGATCCGCTCCAAATTTCA 58.990 45.455 0.00 0.00 43.26 2.69
669 670 2.030946 CGTGAGATCCGCTCCAAATTTC 59.969 50.000 0.00 0.00 43.26 2.17
670 671 2.009774 CGTGAGATCCGCTCCAAATTT 58.990 47.619 0.00 0.00 43.26 1.82
671 672 1.656652 CGTGAGATCCGCTCCAAATT 58.343 50.000 0.00 0.00 43.26 1.82
672 673 3.369381 CGTGAGATCCGCTCCAAAT 57.631 52.632 0.00 0.00 43.26 2.32
673 674 4.910956 CGTGAGATCCGCTCCAAA 57.089 55.556 0.00 0.00 43.26 3.28
680 681 0.999406 AATTTGTCGCGTGAGATCCG 59.001 50.000 5.77 0.00 0.00 4.18
681 682 4.051922 AGATAATTTGTCGCGTGAGATCC 58.948 43.478 5.77 0.00 0.00 3.36
682 683 6.582672 TGATAGATAATTTGTCGCGTGAGATC 59.417 38.462 5.77 1.70 0.00 2.75
683 684 6.363626 GTGATAGATAATTTGTCGCGTGAGAT 59.636 38.462 5.77 0.00 0.00 2.75
684 685 5.685954 GTGATAGATAATTTGTCGCGTGAGA 59.314 40.000 5.77 0.00 0.00 3.27
685 686 5.458779 TGTGATAGATAATTTGTCGCGTGAG 59.541 40.000 5.77 0.00 0.00 3.51
686 687 5.231357 GTGTGATAGATAATTTGTCGCGTGA 59.769 40.000 5.77 0.00 0.00 4.35
687 688 5.005299 TGTGTGATAGATAATTTGTCGCGTG 59.995 40.000 5.77 0.00 0.00 5.34
688 689 5.106442 TGTGTGATAGATAATTTGTCGCGT 58.894 37.500 5.77 0.00 0.00 6.01
689 690 5.635549 TGTGTGATAGATAATTTGTCGCG 57.364 39.130 0.00 0.00 0.00 5.87
690 691 8.667987 TTTTTGTGTGATAGATAATTTGTCGC 57.332 30.769 0.00 0.00 0.00 5.19
742 743 8.711457 CCGCTCAGAAACAAAATCAAAATAAAT 58.289 29.630 0.00 0.00 0.00 1.40
743 744 7.170658 CCCGCTCAGAAACAAAATCAAAATAAA 59.829 33.333 0.00 0.00 0.00 1.40
744 745 6.644592 CCCGCTCAGAAACAAAATCAAAATAA 59.355 34.615 0.00 0.00 0.00 1.40
745 746 6.015856 TCCCGCTCAGAAACAAAATCAAAATA 60.016 34.615 0.00 0.00 0.00 1.40
746 747 4.990426 CCCGCTCAGAAACAAAATCAAAAT 59.010 37.500 0.00 0.00 0.00 1.82
747 748 4.098654 TCCCGCTCAGAAACAAAATCAAAA 59.901 37.500 0.00 0.00 0.00 2.44
748 749 3.634448 TCCCGCTCAGAAACAAAATCAAA 59.366 39.130 0.00 0.00 0.00 2.69
749 750 3.218453 TCCCGCTCAGAAACAAAATCAA 58.782 40.909 0.00 0.00 0.00 2.57
750 751 2.813754 CTCCCGCTCAGAAACAAAATCA 59.186 45.455 0.00 0.00 0.00 2.57
751 752 2.414691 GCTCCCGCTCAGAAACAAAATC 60.415 50.000 0.00 0.00 0.00 2.17
752 753 1.541588 GCTCCCGCTCAGAAACAAAAT 59.458 47.619 0.00 0.00 0.00 1.82
753 754 0.951558 GCTCCCGCTCAGAAACAAAA 59.048 50.000 0.00 0.00 0.00 2.44
754 755 0.179032 TGCTCCCGCTCAGAAACAAA 60.179 50.000 0.00 0.00 36.97 2.83
755 756 0.603707 CTGCTCCCGCTCAGAAACAA 60.604 55.000 0.00 0.00 36.97 2.83
756 757 1.004560 CTGCTCCCGCTCAGAAACA 60.005 57.895 0.00 0.00 36.97 2.83
757 758 0.107945 ATCTGCTCCCGCTCAGAAAC 60.108 55.000 0.00 0.00 41.96 2.78
758 759 0.107993 CATCTGCTCCCGCTCAGAAA 60.108 55.000 0.00 0.00 41.96 2.52
759 760 0.972471 TCATCTGCTCCCGCTCAGAA 60.972 55.000 0.00 0.00 41.96 3.02
760 761 1.380380 TCATCTGCTCCCGCTCAGA 60.380 57.895 0.00 0.00 42.72 3.27
761 762 1.067749 CTCATCTGCTCCCGCTCAG 59.932 63.158 0.00 0.00 36.97 3.35
762 763 3.086391 GCTCATCTGCTCCCGCTCA 62.086 63.158 0.00 0.00 36.97 4.26
763 764 2.280052 GCTCATCTGCTCCCGCTC 60.280 66.667 0.00 0.00 36.97 5.03
764 765 3.859414 GGCTCATCTGCTCCCGCT 61.859 66.667 0.00 0.00 36.97 5.52
765 766 3.859414 AGGCTCATCTGCTCCCGC 61.859 66.667 0.00 0.00 0.00 6.13
766 767 2.108566 CAGGCTCATCTGCTCCCG 59.891 66.667 0.00 0.00 0.00 5.14
767 768 2.509916 CCAGGCTCATCTGCTCCC 59.490 66.667 0.00 0.00 33.64 4.30
768 769 2.509916 CCCAGGCTCATCTGCTCC 59.490 66.667 0.00 0.00 33.64 4.70
769 770 2.203181 GCCCAGGCTCATCTGCTC 60.203 66.667 0.08 0.00 38.26 4.26
770 771 3.013327 TGCCCAGGCTCATCTGCT 61.013 61.111 10.58 0.00 42.51 4.24
771 772 2.827642 GTGCCCAGGCTCATCTGC 60.828 66.667 10.58 0.00 42.51 4.26
772 773 2.124403 GGTGCCCAGGCTCATCTG 60.124 66.667 10.58 0.00 42.51 2.90
773 774 3.790437 CGGTGCCCAGGCTCATCT 61.790 66.667 10.58 0.00 42.51 2.90
774 775 2.615227 ATTCGGTGCCCAGGCTCATC 62.615 60.000 10.58 0.00 42.51 2.92
775 776 2.215451 AATTCGGTGCCCAGGCTCAT 62.215 55.000 10.58 0.00 42.51 2.90
776 777 2.905996 AATTCGGTGCCCAGGCTCA 61.906 57.895 10.58 0.00 42.51 4.26
777 778 2.044946 AATTCGGTGCCCAGGCTC 60.045 61.111 10.58 6.18 42.51 4.70
778 779 2.361610 CAATTCGGTGCCCAGGCT 60.362 61.111 10.58 0.00 42.51 4.58
779 780 3.451894 CCAATTCGGTGCCCAGGC 61.452 66.667 0.38 0.38 42.35 4.85
780 781 0.182537 TATCCAATTCGGTGCCCAGG 59.817 55.000 0.00 0.00 35.57 4.45
781 782 2.154462 GATATCCAATTCGGTGCCCAG 58.846 52.381 0.00 0.00 35.57 4.45
782 783 1.202879 GGATATCCAATTCGGTGCCCA 60.203 52.381 17.34 0.00 35.57 5.36
783 784 1.534729 GGATATCCAATTCGGTGCCC 58.465 55.000 17.34 0.00 35.57 5.36
784 785 1.156736 CGGATATCCAATTCGGTGCC 58.843 55.000 21.70 0.00 35.57 5.01
785 786 2.163818 TCGGATATCCAATTCGGTGC 57.836 50.000 21.70 0.00 35.57 5.01
786 787 5.699001 TGTTTATCGGATATCCAATTCGGTG 59.301 40.000 21.70 2.77 35.57 4.94
787 788 5.860611 TGTTTATCGGATATCCAATTCGGT 58.139 37.500 21.70 5.98 35.57 4.69
788 789 6.649141 TCTTGTTTATCGGATATCCAATTCGG 59.351 38.462 21.70 4.23 35.14 4.30
789 790 7.652300 TCTTGTTTATCGGATATCCAATTCG 57.348 36.000 21.70 7.23 35.14 3.34
790 791 9.057089 ACTTCTTGTTTATCGGATATCCAATTC 57.943 33.333 21.70 7.05 35.14 2.17
791 792 8.980481 ACTTCTTGTTTATCGGATATCCAATT 57.020 30.769 21.70 7.81 35.14 2.32
792 793 8.980481 AACTTCTTGTTTATCGGATATCCAAT 57.020 30.769 21.70 11.58 34.84 3.16
852 857 8.425703 CCCCTTTTTATTAGTTTCTTTTCACCA 58.574 33.333 0.00 0.00 0.00 4.17
890 895 6.633500 TTTCTATGGTCACTCACCTTTTTG 57.367 37.500 0.00 0.00 46.98 2.44
960 966 8.799367 AGTGGACGCATTTATATATACACTGTA 58.201 33.333 7.29 0.00 34.54 2.74
1020 1026 3.835395 AGGGGAGAGTAAAAGAGACTGTG 59.165 47.826 0.00 0.00 0.00 3.66
1021 1027 4.134933 AGGGGAGAGTAAAAGAGACTGT 57.865 45.455 0.00 0.00 0.00 3.55
1022 1028 4.775253 AGAAGGGGAGAGTAAAAGAGACTG 59.225 45.833 0.00 0.00 0.00 3.51
1170 1488 2.682494 GGCCGAGGTGTCCCTACA 60.682 66.667 0.00 0.00 42.86 2.74
2170 2503 7.117812 TGTGGTGTCGTTAACTAGTAGTACTAC 59.882 40.741 23.03 23.03 36.35 2.73
2171 2504 7.158697 TGTGGTGTCGTTAACTAGTAGTACTA 58.841 38.462 9.66 9.66 0.00 1.82
2172 2505 5.997746 TGTGGTGTCGTTAACTAGTAGTACT 59.002 40.000 8.14 8.14 0.00 2.73
2173 2506 6.073003 ACTGTGGTGTCGTTAACTAGTAGTAC 60.073 42.308 2.50 0.00 0.00 2.73
2174 2507 5.997746 ACTGTGGTGTCGTTAACTAGTAGTA 59.002 40.000 2.50 0.00 0.00 1.82
2188 2521 0.663153 GCAGGTTTCACTGTGGTGTC 59.337 55.000 8.11 0.00 43.41 3.67
2327 2665 3.325135 AGAAGAGAGATTGTGGAAACGGT 59.675 43.478 0.00 0.00 0.00 4.83
2336 2674 5.067674 CGGATGAGAGAAGAAGAGAGATTGT 59.932 44.000 0.00 0.00 0.00 2.71
2350 2688 4.375406 GGTTCCCCGGATGAGAGA 57.625 61.111 0.73 0.00 0.00 3.10
2436 2774 3.827302 ACTACTATATGCTGTCCCGGAAG 59.173 47.826 0.73 0.00 0.00 3.46
2451 2789 4.278669 CGCCTATCCACAGTTCACTACTAT 59.721 45.833 0.00 0.00 34.56 2.12
2452 2790 3.630769 CGCCTATCCACAGTTCACTACTA 59.369 47.826 0.00 0.00 34.56 1.82
2453 2791 2.427453 CGCCTATCCACAGTTCACTACT 59.573 50.000 0.00 0.00 37.68 2.57
2631 2981 3.069586 TGTCACTGTTCACTTGGGACTAG 59.930 47.826 0.00 0.00 0.00 2.57
2638 2988 1.268032 GCGGTTGTCACTGTTCACTTG 60.268 52.381 0.00 0.00 0.00 3.16
2667 3017 5.763698 TCTCTCGGATTGTACTACCACTATG 59.236 44.000 0.00 0.00 0.00 2.23
2747 3097 6.887013 AGCAATTCTCACTGACTAATCATCT 58.113 36.000 0.00 0.00 33.22 2.90
2924 3274 4.162320 CGTGCATACCCCTATTATCATCCT 59.838 45.833 0.00 0.00 0.00 3.24
2932 3282 2.539983 AGCCGTGCATACCCCTATT 58.460 52.632 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.