Multiple sequence alignment - TraesCS3A01G191100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G191100 chr3A 100.000 3130 0 0 1 3130 241921344 241924473 0.000000e+00 5781
1 TraesCS3A01G191100 chr3A 81.871 171 27 4 2426 2593 159433166 159433335 1.170000e-29 141
2 TraesCS3A01G191100 chr3A 79.688 192 32 5 2419 2606 108744039 108744227 7.040000e-27 132
3 TraesCS3A01G191100 chr3B 92.538 1367 54 17 771 2122 270892217 270890884 0.000000e+00 1916
4 TraesCS3A01G191100 chr3B 88.535 942 38 22 2193 3130 270890696 270889821 0.000000e+00 1077
5 TraesCS3A01G191100 chr3D 89.244 1441 69 41 771 2201 188359705 188358341 0.000000e+00 1724
6 TraesCS3A01G191100 chr3D 90.223 941 58 20 2203 3130 188358252 188357333 0.000000e+00 1197
7 TraesCS3A01G191100 chr3D 78.125 192 34 6 2419 2606 260598745 260598932 7.090000e-22 115
8 TraesCS3A01G191100 chr7D 94.852 777 36 4 1 775 126931535 126932309 0.000000e+00 1210
9 TraesCS3A01G191100 chr7D 77.546 432 72 22 352 777 33823889 33823477 1.450000e-58 237
10 TraesCS3A01G191100 chr7B 89.882 425 25 11 1192 1606 656880618 656881034 5.940000e-147 531
11 TraesCS3A01G191100 chr5D 89.815 432 16 8 1192 1608 535199391 535199809 2.140000e-146 529
12 TraesCS3A01G191100 chr5D 79.474 190 33 5 2419 2604 5561072 5560885 2.530000e-26 130
13 TraesCS3A01G191100 chr2B 87.294 425 36 10 1192 1608 792711038 792711452 1.310000e-128 470
14 TraesCS3A01G191100 chr1B 77.376 747 127 36 41 773 451554477 451555195 3.760000e-109 405
15 TraesCS3A01G191100 chr5A 90.909 198 9 5 1415 1608 43189081 43189273 1.110000e-64 257
16 TraesCS3A01G191100 chr5A 79.310 174 27 7 2434 2601 6629060 6629230 2.550000e-21 113
17 TraesCS3A01G191100 chr6B 79.703 202 39 2 2419 2619 347219713 347219513 9.050000e-31 145
18 TraesCS3A01G191100 chr6B 79.688 192 32 7 2419 2605 636486042 636485853 7.040000e-27 132
19 TraesCS3A01G191100 chr1D 86.792 106 13 1 2485 2589 309073221 309073116 1.970000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G191100 chr3A 241921344 241924473 3129 False 5781.0 5781 100.0000 1 3130 1 chr3A.!!$F3 3129
1 TraesCS3A01G191100 chr3B 270889821 270892217 2396 True 1496.5 1916 90.5365 771 3130 2 chr3B.!!$R1 2359
2 TraesCS3A01G191100 chr3D 188357333 188359705 2372 True 1460.5 1724 89.7335 771 3130 2 chr3D.!!$R1 2359
3 TraesCS3A01G191100 chr7D 126931535 126932309 774 False 1210.0 1210 94.8520 1 775 1 chr7D.!!$F1 774
4 TraesCS3A01G191100 chr1B 451554477 451555195 718 False 405.0 405 77.3760 41 773 1 chr1B.!!$F1 732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
314 315 0.032540 GCTGGACTTTGCAGTTTGGG 59.967 55.0 0.00 0.0 38.17 4.12 F
412 413 0.038892 GCCATTGAATATGCTGGCCG 60.039 55.0 2.97 0.0 46.76 6.13 F
510 511 0.040958 CTTCTTCTGCGGTGTTGTGC 60.041 55.0 0.00 0.0 0.00 4.57 F
1393 1418 0.107703 GATCCTCGGGACATTGTGCA 60.108 55.0 10.61 0.0 32.98 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1269 1283 0.695347 AAGAGAAGAAGCCACCAGGG 59.305 55.000 0.00 0.0 40.85 4.45 R
1794 1822 0.909623 TTGAACCCTAGGTAGCTGGC 59.090 55.000 8.29 0.0 33.12 4.85 R
1806 1834 1.946283 GCAGTGAGCTAGGTTGAACCC 60.946 57.143 11.41 0.0 38.70 4.11 R
2783 3536 0.250234 TTGAAGGACCGATGGCTGAG 59.750 55.000 0.00 0.0 0.00 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.419542 GTGTGTGGAGATCTGTAAATAGCA 58.580 41.667 0.00 0.00 0.00 3.49
57 58 1.071471 CGAGTCTTGCCCAAGTGGT 59.929 57.895 7.80 0.00 39.38 4.16
84 85 4.830765 TATGCCGTGGTGGAGCGC 62.831 66.667 0.00 0.00 42.00 5.92
125 126 4.514577 CCTGGTGGCTAGCGTCGG 62.515 72.222 9.00 5.60 0.00 4.79
130 131 4.367023 TGGCTAGCGTCGGCGTTT 62.367 61.111 12.58 1.99 46.35 3.60
131 132 3.551915 GGCTAGCGTCGGCGTTTC 61.552 66.667 12.58 0.00 46.35 2.78
132 133 2.506438 GCTAGCGTCGGCGTTTCT 60.506 61.111 12.58 1.58 46.35 2.52
133 134 2.789203 GCTAGCGTCGGCGTTTCTG 61.789 63.158 12.58 0.00 46.35 3.02
134 135 1.154093 CTAGCGTCGGCGTTTCTGA 60.154 57.895 12.58 0.00 46.35 3.27
135 136 0.525668 CTAGCGTCGGCGTTTCTGAT 60.526 55.000 12.58 0.00 46.35 2.90
136 137 0.800683 TAGCGTCGGCGTTTCTGATG 60.801 55.000 12.58 0.00 46.35 3.07
137 138 3.081133 CGTCGGCGTTTCTGATGG 58.919 61.111 6.85 0.00 34.20 3.51
138 139 1.736645 CGTCGGCGTTTCTGATGGT 60.737 57.895 6.85 0.00 34.20 3.55
139 140 1.289109 CGTCGGCGTTTCTGATGGTT 61.289 55.000 6.85 0.00 34.20 3.67
140 141 0.165944 GTCGGCGTTTCTGATGGTTG 59.834 55.000 6.85 0.00 31.70 3.77
141 142 1.154225 CGGCGTTTCTGATGGTTGC 60.154 57.895 0.00 0.00 0.00 4.17
142 143 1.154225 GGCGTTTCTGATGGTTGCG 60.154 57.895 0.00 0.00 0.00 4.85
143 144 1.154225 GCGTTTCTGATGGTTGCGG 60.154 57.895 0.00 0.00 0.00 5.69
144 145 1.852067 GCGTTTCTGATGGTTGCGGT 61.852 55.000 0.00 0.00 0.00 5.68
145 146 0.110238 CGTTTCTGATGGTTGCGGTG 60.110 55.000 0.00 0.00 0.00 4.94
146 147 0.240945 GTTTCTGATGGTTGCGGTGG 59.759 55.000 0.00 0.00 0.00 4.61
147 148 1.523154 TTTCTGATGGTTGCGGTGGC 61.523 55.000 0.00 0.00 40.52 5.01
148 149 3.803082 CTGATGGTTGCGGTGGCG 61.803 66.667 0.00 0.00 44.10 5.69
149 150 4.321966 TGATGGTTGCGGTGGCGA 62.322 61.111 0.00 0.00 44.10 5.54
150 151 3.499737 GATGGTTGCGGTGGCGAG 61.500 66.667 0.00 0.00 44.10 5.03
182 183 2.890474 CGGAGGAAATGACGGCGG 60.890 66.667 13.24 0.00 0.00 6.13
183 184 3.202706 GGAGGAAATGACGGCGGC 61.203 66.667 13.24 9.67 0.00 6.53
184 185 3.564027 GAGGAAATGACGGCGGCG 61.564 66.667 31.06 31.06 0.00 6.46
185 186 4.077184 AGGAAATGACGGCGGCGA 62.077 61.111 38.93 17.81 0.00 5.54
186 187 3.861263 GGAAATGACGGCGGCGAC 61.861 66.667 38.93 31.68 0.00 5.19
187 188 2.813908 GAAATGACGGCGGCGACT 60.814 61.111 38.93 17.55 0.00 4.18
188 189 2.799540 GAAATGACGGCGGCGACTC 61.800 63.158 38.93 25.53 0.00 3.36
189 190 4.814294 AATGACGGCGGCGACTCC 62.814 66.667 38.93 21.93 0.00 3.85
194 195 4.735132 CGGCGGCGACTCCTTCAA 62.735 66.667 29.19 0.00 0.00 2.69
195 196 2.125106 GGCGGCGACTCCTTCAAT 60.125 61.111 12.98 0.00 0.00 2.57
196 197 1.143183 GGCGGCGACTCCTTCAATA 59.857 57.895 12.98 0.00 0.00 1.90
197 198 0.461339 GGCGGCGACTCCTTCAATAA 60.461 55.000 12.98 0.00 0.00 1.40
198 199 0.931005 GCGGCGACTCCTTCAATAAG 59.069 55.000 12.98 0.00 0.00 1.73
199 200 0.931005 CGGCGACTCCTTCAATAAGC 59.069 55.000 0.00 0.00 0.00 3.09
200 201 1.471676 CGGCGACTCCTTCAATAAGCT 60.472 52.381 0.00 0.00 0.00 3.74
201 202 2.205911 GGCGACTCCTTCAATAAGCTC 58.794 52.381 0.00 0.00 0.00 4.09
202 203 1.855360 GCGACTCCTTCAATAAGCTCG 59.145 52.381 0.00 0.00 0.00 5.03
203 204 2.735762 GCGACTCCTTCAATAAGCTCGT 60.736 50.000 0.00 0.00 30.92 4.18
204 205 3.512680 CGACTCCTTCAATAAGCTCGTT 58.487 45.455 0.00 0.00 0.00 3.85
205 206 3.304559 CGACTCCTTCAATAAGCTCGTTG 59.695 47.826 5.01 5.01 0.00 4.10
206 207 4.246458 GACTCCTTCAATAAGCTCGTTGT 58.754 43.478 9.92 0.00 0.00 3.32
207 208 3.997021 ACTCCTTCAATAAGCTCGTTGTG 59.003 43.478 9.92 5.77 0.00 3.33
208 209 3.997021 CTCCTTCAATAAGCTCGTTGTGT 59.003 43.478 9.92 0.00 0.00 3.72
209 210 4.385825 TCCTTCAATAAGCTCGTTGTGTT 58.614 39.130 9.92 0.00 0.00 3.32
210 211 4.819630 TCCTTCAATAAGCTCGTTGTGTTT 59.180 37.500 9.92 0.00 0.00 2.83
211 212 5.049680 TCCTTCAATAAGCTCGTTGTGTTTC 60.050 40.000 9.92 0.00 0.00 2.78
212 213 4.742438 TCAATAAGCTCGTTGTGTTTCC 57.258 40.909 9.92 0.00 0.00 3.13
213 214 4.385825 TCAATAAGCTCGTTGTGTTTCCT 58.614 39.130 9.92 0.00 0.00 3.36
214 215 4.213270 TCAATAAGCTCGTTGTGTTTCCTG 59.787 41.667 9.92 0.00 0.00 3.86
215 216 2.038387 AAGCTCGTTGTGTTTCCTGT 57.962 45.000 0.00 0.00 0.00 4.00
216 217 2.038387 AGCTCGTTGTGTTTCCTGTT 57.962 45.000 0.00 0.00 0.00 3.16
217 218 3.188159 AGCTCGTTGTGTTTCCTGTTA 57.812 42.857 0.00 0.00 0.00 2.41
218 219 3.537580 AGCTCGTTGTGTTTCCTGTTAA 58.462 40.909 0.00 0.00 0.00 2.01
219 220 3.560068 AGCTCGTTGTGTTTCCTGTTAAG 59.440 43.478 0.00 0.00 0.00 1.85
220 221 3.303791 GCTCGTTGTGTTTCCTGTTAAGG 60.304 47.826 0.00 0.00 46.06 2.69
221 222 3.875134 CTCGTTGTGTTTCCTGTTAAGGT 59.125 43.478 0.00 0.00 44.82 3.50
222 223 3.623960 TCGTTGTGTTTCCTGTTAAGGTG 59.376 43.478 0.00 0.00 44.82 4.00
223 224 3.242936 CGTTGTGTTTCCTGTTAAGGTGG 60.243 47.826 0.00 0.00 44.82 4.61
224 225 3.935818 TGTGTTTCCTGTTAAGGTGGA 57.064 42.857 0.00 0.00 44.82 4.02
225 226 3.815809 TGTGTTTCCTGTTAAGGTGGAG 58.184 45.455 0.00 0.00 44.82 3.86
226 227 3.146847 GTGTTTCCTGTTAAGGTGGAGG 58.853 50.000 0.00 0.00 44.82 4.30
227 228 2.160205 GTTTCCTGTTAAGGTGGAGGC 58.840 52.381 0.00 0.00 44.82 4.70
228 229 0.696501 TTCCTGTTAAGGTGGAGGCC 59.303 55.000 0.00 0.00 44.82 5.19
229 230 1.205460 TCCTGTTAAGGTGGAGGCCC 61.205 60.000 0.00 0.00 44.82 5.80
230 231 1.078426 CTGTTAAGGTGGAGGCCCG 60.078 63.158 0.00 0.00 34.29 6.13
231 232 2.271173 GTTAAGGTGGAGGCCCGG 59.729 66.667 0.00 0.00 34.29 5.73
232 233 3.723922 TTAAGGTGGAGGCCCGGC 61.724 66.667 0.00 0.00 34.29 6.13
233 234 4.733725 TAAGGTGGAGGCCCGGCT 62.734 66.667 9.86 0.00 34.29 5.52
240 241 4.228567 GAGGCCCGGCTGCTCTAC 62.229 72.222 9.86 0.00 0.00 2.59
244 245 3.083997 CCCGGCTGCTCTACCCTT 61.084 66.667 0.00 0.00 0.00 3.95
245 246 2.670148 CCCGGCTGCTCTACCCTTT 61.670 63.158 0.00 0.00 0.00 3.11
246 247 1.153349 CCGGCTGCTCTACCCTTTC 60.153 63.158 0.00 0.00 0.00 2.62
247 248 1.617947 CCGGCTGCTCTACCCTTTCT 61.618 60.000 0.00 0.00 0.00 2.52
248 249 0.250513 CGGCTGCTCTACCCTTTCTT 59.749 55.000 0.00 0.00 0.00 2.52
249 250 1.339151 CGGCTGCTCTACCCTTTCTTT 60.339 52.381 0.00 0.00 0.00 2.52
250 251 2.796557 GGCTGCTCTACCCTTTCTTTT 58.203 47.619 0.00 0.00 0.00 2.27
251 252 2.750166 GGCTGCTCTACCCTTTCTTTTC 59.250 50.000 0.00 0.00 0.00 2.29
252 253 3.412386 GCTGCTCTACCCTTTCTTTTCA 58.588 45.455 0.00 0.00 0.00 2.69
253 254 3.821033 GCTGCTCTACCCTTTCTTTTCAA 59.179 43.478 0.00 0.00 0.00 2.69
254 255 4.083057 GCTGCTCTACCCTTTCTTTTCAAG 60.083 45.833 0.00 0.00 0.00 3.02
255 256 3.821033 TGCTCTACCCTTTCTTTTCAAGC 59.179 43.478 0.00 0.00 0.00 4.01
256 257 3.191581 GCTCTACCCTTTCTTTTCAAGCC 59.808 47.826 0.00 0.00 0.00 4.35
257 258 4.398319 CTCTACCCTTTCTTTTCAAGCCA 58.602 43.478 0.00 0.00 0.00 4.75
258 259 4.998051 TCTACCCTTTCTTTTCAAGCCAT 58.002 39.130 0.00 0.00 0.00 4.40
259 260 5.010282 TCTACCCTTTCTTTTCAAGCCATC 58.990 41.667 0.00 0.00 0.00 3.51
260 261 2.558359 ACCCTTTCTTTTCAAGCCATCG 59.442 45.455 0.00 0.00 0.00 3.84
261 262 2.558359 CCCTTTCTTTTCAAGCCATCGT 59.442 45.455 0.00 0.00 0.00 3.73
262 263 3.568538 CCTTTCTTTTCAAGCCATCGTG 58.431 45.455 0.00 0.00 0.00 4.35
263 264 3.568538 CTTTCTTTTCAAGCCATCGTGG 58.431 45.455 0.25 0.25 41.55 4.94
264 265 2.270352 TCTTTTCAAGCCATCGTGGT 57.730 45.000 6.02 0.00 40.46 4.16
265 266 1.879380 TCTTTTCAAGCCATCGTGGTG 59.121 47.619 6.02 0.00 40.46 4.17
266 267 0.958091 TTTTCAAGCCATCGTGGTGG 59.042 50.000 0.00 0.00 40.46 4.61
267 268 0.179004 TTTCAAGCCATCGTGGTGGT 60.179 50.000 0.37 0.00 40.46 4.16
268 269 0.888736 TTCAAGCCATCGTGGTGGTG 60.889 55.000 0.37 0.00 40.46 4.17
269 270 2.034066 AAGCCATCGTGGTGGTGG 59.966 61.111 0.37 0.00 40.46 4.61
270 271 2.525124 AAGCCATCGTGGTGGTGGA 61.525 57.895 0.37 0.00 40.46 4.02
271 272 1.852157 AAGCCATCGTGGTGGTGGAT 61.852 55.000 0.37 0.00 40.46 3.41
272 273 2.114670 GCCATCGTGGTGGTGGATG 61.115 63.158 0.37 0.00 40.46 3.51
273 274 4.223800 CATCGTGGTGGTGGATGG 57.776 61.111 0.00 0.00 35.15 3.51
274 275 1.601703 CATCGTGGTGGTGGATGGA 59.398 57.895 0.00 0.00 35.15 3.41
275 276 0.462581 CATCGTGGTGGTGGATGGAG 60.463 60.000 0.00 0.00 35.15 3.86
276 277 1.626356 ATCGTGGTGGTGGATGGAGG 61.626 60.000 0.00 0.00 0.00 4.30
277 278 2.290287 CGTGGTGGTGGATGGAGGA 61.290 63.158 0.00 0.00 0.00 3.71
278 279 1.836999 CGTGGTGGTGGATGGAGGAA 61.837 60.000 0.00 0.00 0.00 3.36
279 280 0.035056 GTGGTGGTGGATGGAGGAAG 60.035 60.000 0.00 0.00 0.00 3.46
280 281 0.178876 TGGTGGTGGATGGAGGAAGA 60.179 55.000 0.00 0.00 0.00 2.87
281 282 0.991920 GGTGGTGGATGGAGGAAGAA 59.008 55.000 0.00 0.00 0.00 2.52
282 283 1.065126 GGTGGTGGATGGAGGAAGAAG 60.065 57.143 0.00 0.00 0.00 2.85
283 284 1.065126 GTGGTGGATGGAGGAAGAAGG 60.065 57.143 0.00 0.00 0.00 3.46
284 285 1.203428 TGGTGGATGGAGGAAGAAGGA 60.203 52.381 0.00 0.00 0.00 3.36
285 286 1.488393 GGTGGATGGAGGAAGAAGGAG 59.512 57.143 0.00 0.00 0.00 3.69
286 287 2.472029 GTGGATGGAGGAAGAAGGAGA 58.528 52.381 0.00 0.00 0.00 3.71
287 288 2.433970 GTGGATGGAGGAAGAAGGAGAG 59.566 54.545 0.00 0.00 0.00 3.20
288 289 2.046292 GGATGGAGGAAGAAGGAGAGG 58.954 57.143 0.00 0.00 0.00 3.69
289 290 1.416030 GATGGAGGAAGAAGGAGAGGC 59.584 57.143 0.00 0.00 0.00 4.70
290 291 0.972983 TGGAGGAAGAAGGAGAGGCG 60.973 60.000 0.00 0.00 0.00 5.52
291 292 1.681486 GGAGGAAGAAGGAGAGGCGG 61.681 65.000 0.00 0.00 0.00 6.13
292 293 2.188207 GGAAGAAGGAGAGGCGGC 59.812 66.667 0.00 0.00 0.00 6.53
293 294 2.202810 GAAGAAGGAGAGGCGGCG 60.203 66.667 0.51 0.51 0.00 6.46
294 295 2.680352 AAGAAGGAGAGGCGGCGA 60.680 61.111 12.98 0.00 0.00 5.54
295 296 2.621371 GAAGAAGGAGAGGCGGCGAG 62.621 65.000 12.98 0.00 0.00 5.03
305 306 3.793144 GCGGCGAGCTGGACTTTG 61.793 66.667 12.98 0.00 44.04 2.77
306 307 3.793144 CGGCGAGCTGGACTTTGC 61.793 66.667 0.00 0.00 0.00 3.68
307 308 2.669569 GGCGAGCTGGACTTTGCA 60.670 61.111 0.00 0.00 33.11 4.08
308 309 2.684843 GGCGAGCTGGACTTTGCAG 61.685 63.158 0.00 0.00 38.97 4.41
309 310 1.963338 GCGAGCTGGACTTTGCAGT 60.963 57.895 0.00 0.00 38.17 4.40
310 311 1.510480 GCGAGCTGGACTTTGCAGTT 61.510 55.000 0.00 0.00 38.17 3.16
311 312 0.947244 CGAGCTGGACTTTGCAGTTT 59.053 50.000 0.00 0.00 38.17 2.66
312 313 1.334419 CGAGCTGGACTTTGCAGTTTG 60.334 52.381 0.00 0.00 38.17 2.93
313 314 1.000938 GAGCTGGACTTTGCAGTTTGG 60.001 52.381 0.00 0.00 38.17 3.28
314 315 0.032540 GCTGGACTTTGCAGTTTGGG 59.967 55.000 0.00 0.00 38.17 4.12
315 316 1.691196 CTGGACTTTGCAGTTTGGGA 58.309 50.000 0.00 0.00 31.22 4.37
316 317 2.031120 CTGGACTTTGCAGTTTGGGAA 58.969 47.619 0.00 0.00 31.22 3.97
317 318 2.031120 TGGACTTTGCAGTTTGGGAAG 58.969 47.619 0.00 0.00 31.22 3.46
318 319 1.341209 GGACTTTGCAGTTTGGGAAGG 59.659 52.381 0.00 0.00 31.22 3.46
319 320 2.306847 GACTTTGCAGTTTGGGAAGGA 58.693 47.619 0.00 0.00 31.22 3.36
320 321 2.294512 GACTTTGCAGTTTGGGAAGGAG 59.705 50.000 0.00 0.00 31.22 3.69
321 322 1.000171 CTTTGCAGTTTGGGAAGGAGC 60.000 52.381 0.00 0.00 0.00 4.70
322 323 0.185901 TTGCAGTTTGGGAAGGAGCT 59.814 50.000 0.00 0.00 0.00 4.09
323 324 0.250901 TGCAGTTTGGGAAGGAGCTC 60.251 55.000 4.71 4.71 0.00 4.09
324 325 0.250901 GCAGTTTGGGAAGGAGCTCA 60.251 55.000 17.19 0.00 0.00 4.26
325 326 1.615384 GCAGTTTGGGAAGGAGCTCAT 60.615 52.381 17.19 5.25 0.00 2.90
326 327 2.363683 CAGTTTGGGAAGGAGCTCATC 58.636 52.381 17.19 12.86 0.00 2.92
335 336 3.721793 GGAGCTCATCCTCAATGGG 57.278 57.895 17.19 0.00 45.64 4.00
336 337 0.842635 GGAGCTCATCCTCAATGGGT 59.157 55.000 17.19 0.00 45.64 4.51
337 338 1.213926 GGAGCTCATCCTCAATGGGTT 59.786 52.381 17.19 0.00 45.64 4.11
338 339 2.357569 GGAGCTCATCCTCAATGGGTTT 60.358 50.000 17.19 0.00 45.64 3.27
339 340 2.686915 GAGCTCATCCTCAATGGGTTTG 59.313 50.000 9.40 0.00 38.22 2.93
340 341 2.309755 AGCTCATCCTCAATGGGTTTGA 59.690 45.455 0.00 0.00 42.09 2.69
347 348 2.472695 TCAATGGGTTTGAGACGAGG 57.527 50.000 0.00 0.00 39.44 4.63
348 349 0.804989 CAATGGGTTTGAGACGAGGC 59.195 55.000 0.00 0.00 37.53 4.70
349 350 0.400213 AATGGGTTTGAGACGAGGCA 59.600 50.000 0.00 0.00 0.00 4.75
350 351 0.400213 ATGGGTTTGAGACGAGGCAA 59.600 50.000 0.00 0.00 0.00 4.52
351 352 0.534203 TGGGTTTGAGACGAGGCAAC 60.534 55.000 0.00 0.00 0.00 4.17
352 353 1.566018 GGGTTTGAGACGAGGCAACG 61.566 60.000 0.00 2.85 46.39 4.10
353 354 1.566018 GGTTTGAGACGAGGCAACGG 61.566 60.000 8.70 0.00 46.39 4.44
354 355 1.959226 TTTGAGACGAGGCAACGGC 60.959 57.895 8.70 5.55 46.39 5.68
355 356 4.717629 TGAGACGAGGCAACGGCG 62.718 66.667 4.80 4.80 46.71 6.46
395 396 4.131088 GGTCCTCACCGTCTCGCC 62.131 72.222 0.00 0.00 31.06 5.54
396 397 3.371063 GTCCTCACCGTCTCGCCA 61.371 66.667 0.00 0.00 0.00 5.69
397 398 2.362503 TCCTCACCGTCTCGCCAT 60.363 61.111 0.00 0.00 0.00 4.40
398 399 1.982395 TCCTCACCGTCTCGCCATT 60.982 57.895 0.00 0.00 0.00 3.16
399 400 1.811266 CCTCACCGTCTCGCCATTG 60.811 63.158 0.00 0.00 0.00 2.82
400 401 1.215382 CTCACCGTCTCGCCATTGA 59.785 57.895 0.00 0.00 0.00 2.57
401 402 0.389817 CTCACCGTCTCGCCATTGAA 60.390 55.000 0.00 0.00 0.00 2.69
402 403 0.249120 TCACCGTCTCGCCATTGAAT 59.751 50.000 0.00 0.00 0.00 2.57
403 404 1.478916 TCACCGTCTCGCCATTGAATA 59.521 47.619 0.00 0.00 0.00 1.75
404 405 2.102420 TCACCGTCTCGCCATTGAATAT 59.898 45.455 0.00 0.00 0.00 1.28
405 406 2.221749 CACCGTCTCGCCATTGAATATG 59.778 50.000 0.00 0.00 0.00 1.78
406 407 1.195448 CCGTCTCGCCATTGAATATGC 59.805 52.381 0.00 0.00 0.00 3.14
407 408 2.138320 CGTCTCGCCATTGAATATGCT 58.862 47.619 0.00 0.00 0.00 3.79
408 409 2.096565 CGTCTCGCCATTGAATATGCTG 60.097 50.000 0.00 0.00 0.00 4.41
409 410 2.225019 GTCTCGCCATTGAATATGCTGG 59.775 50.000 0.00 0.00 0.00 4.85
411 412 3.900446 GCCATTGAATATGCTGGCC 57.100 52.632 2.97 0.00 46.76 5.36
412 413 0.038892 GCCATTGAATATGCTGGCCG 60.039 55.000 2.97 0.00 46.76 6.13
413 414 1.608055 CCATTGAATATGCTGGCCGA 58.392 50.000 0.00 0.00 0.00 5.54
414 415 1.955778 CCATTGAATATGCTGGCCGAA 59.044 47.619 0.00 0.00 0.00 4.30
415 416 2.030540 CCATTGAATATGCTGGCCGAAG 60.031 50.000 0.00 0.00 0.00 3.79
432 433 2.438614 GGGCGGCCCTTTCTCTTC 60.439 66.667 30.86 0.00 41.34 2.87
433 434 2.438614 GGCGGCCCTTTCTCTTCC 60.439 66.667 8.12 0.00 0.00 3.46
434 435 2.671682 GCGGCCCTTTCTCTTCCT 59.328 61.111 0.00 0.00 0.00 3.36
435 436 1.450491 GCGGCCCTTTCTCTTCCTC 60.450 63.158 0.00 0.00 0.00 3.71
436 437 1.222113 CGGCCCTTTCTCTTCCTCC 59.778 63.158 0.00 0.00 0.00 4.30
437 438 1.610327 GGCCCTTTCTCTTCCTCCC 59.390 63.158 0.00 0.00 0.00 4.30
438 439 1.222113 GCCCTTTCTCTTCCTCCCG 59.778 63.158 0.00 0.00 0.00 5.14
439 440 1.908483 CCCTTTCTCTTCCTCCCGG 59.092 63.158 0.00 0.00 0.00 5.73
440 441 1.222113 CCTTTCTCTTCCTCCCGGC 59.778 63.158 0.00 0.00 0.00 6.13
441 442 1.222113 CTTTCTCTTCCTCCCGGCC 59.778 63.158 0.00 0.00 0.00 6.13
442 443 1.229529 TTTCTCTTCCTCCCGGCCT 60.230 57.895 0.00 0.00 0.00 5.19
443 444 1.553690 TTTCTCTTCCTCCCGGCCTG 61.554 60.000 0.00 0.00 0.00 4.85
444 445 3.474570 CTCTTCCTCCCGGCCTGG 61.475 72.222 6.92 6.92 37.55 4.45
445 446 4.332543 TCTTCCTCCCGGCCTGGT 62.333 66.667 13.58 0.00 35.15 4.00
446 447 4.101448 CTTCCTCCCGGCCTGGTG 62.101 72.222 13.58 10.74 35.15 4.17
456 457 2.512896 GCCTGGTGCCTAGATGGG 59.487 66.667 0.00 0.00 36.00 4.00
457 458 2.072487 GCCTGGTGCCTAGATGGGA 61.072 63.158 0.00 0.00 36.00 4.37
458 459 2.049627 GCCTGGTGCCTAGATGGGAG 62.050 65.000 0.00 0.00 36.62 4.30
459 460 1.414061 CCTGGTGCCTAGATGGGAGG 61.414 65.000 0.00 0.00 36.62 4.30
466 467 1.500474 CCTAGATGGGAGGCAGTTCA 58.500 55.000 0.00 0.00 0.00 3.18
467 468 2.053244 CCTAGATGGGAGGCAGTTCAT 58.947 52.381 0.00 0.00 0.00 2.57
468 469 2.038295 CCTAGATGGGAGGCAGTTCATC 59.962 54.545 0.00 0.00 37.02 2.92
469 470 1.890552 AGATGGGAGGCAGTTCATCT 58.109 50.000 0.00 0.00 40.78 2.90
470 471 1.767681 AGATGGGAGGCAGTTCATCTC 59.232 52.381 0.00 0.00 41.48 2.75
471 472 0.842635 ATGGGAGGCAGTTCATCTCC 59.157 55.000 0.00 0.00 44.64 3.71
472 473 1.144936 GGGAGGCAGTTCATCTCCG 59.855 63.158 0.00 0.00 45.91 4.63
473 474 1.330655 GGGAGGCAGTTCATCTCCGA 61.331 60.000 0.00 0.00 45.91 4.55
474 475 0.537188 GGAGGCAGTTCATCTCCGAA 59.463 55.000 0.00 0.00 37.85 4.30
475 476 1.139853 GGAGGCAGTTCATCTCCGAAT 59.860 52.381 0.00 0.00 37.85 3.34
476 477 2.478831 GAGGCAGTTCATCTCCGAATC 58.521 52.381 0.00 0.00 0.00 2.52
477 478 1.202463 AGGCAGTTCATCTCCGAATCG 60.202 52.381 0.00 0.00 0.00 3.34
490 491 2.873133 CGAATCGGAGTCTAAGGCTT 57.127 50.000 4.58 4.58 0.00 4.35
491 492 2.733517 CGAATCGGAGTCTAAGGCTTC 58.266 52.381 1.30 0.00 0.00 3.86
492 493 2.359531 CGAATCGGAGTCTAAGGCTTCT 59.640 50.000 1.30 0.00 0.00 2.85
493 494 3.181485 CGAATCGGAGTCTAAGGCTTCTT 60.181 47.826 1.30 0.00 34.65 2.52
494 495 4.364860 GAATCGGAGTCTAAGGCTTCTTC 58.635 47.826 1.30 0.00 32.23 2.87
495 496 3.088789 TCGGAGTCTAAGGCTTCTTCT 57.911 47.619 1.30 0.00 32.23 2.85
496 497 3.432378 TCGGAGTCTAAGGCTTCTTCTT 58.568 45.455 1.30 0.00 32.23 2.52
497 498 3.444388 TCGGAGTCTAAGGCTTCTTCTTC 59.556 47.826 1.30 0.00 32.23 2.87
498 499 3.445805 CGGAGTCTAAGGCTTCTTCTTCT 59.554 47.826 1.30 0.00 32.23 2.85
499 500 4.676723 CGGAGTCTAAGGCTTCTTCTTCTG 60.677 50.000 1.30 0.00 32.23 3.02
500 501 4.180817 GAGTCTAAGGCTTCTTCTTCTGC 58.819 47.826 1.30 0.00 32.23 4.26
501 502 2.926838 GTCTAAGGCTTCTTCTTCTGCG 59.073 50.000 1.30 0.00 32.23 5.18
502 503 2.093973 TCTAAGGCTTCTTCTTCTGCGG 60.094 50.000 1.30 0.00 32.23 5.69
503 504 0.398318 AAGGCTTCTTCTTCTGCGGT 59.602 50.000 0.00 0.00 0.00 5.68
504 505 0.321122 AGGCTTCTTCTTCTGCGGTG 60.321 55.000 0.00 0.00 0.00 4.94
505 506 0.603975 GGCTTCTTCTTCTGCGGTGT 60.604 55.000 0.00 0.00 0.00 4.16
506 507 1.230324 GCTTCTTCTTCTGCGGTGTT 58.770 50.000 0.00 0.00 0.00 3.32
507 508 1.069636 GCTTCTTCTTCTGCGGTGTTG 60.070 52.381 0.00 0.00 0.00 3.33
508 509 2.213499 CTTCTTCTTCTGCGGTGTTGT 58.787 47.619 0.00 0.00 0.00 3.32
509 510 1.581934 TCTTCTTCTGCGGTGTTGTG 58.418 50.000 0.00 0.00 0.00 3.33
510 511 0.040958 CTTCTTCTGCGGTGTTGTGC 60.041 55.000 0.00 0.00 0.00 4.57
511 512 0.463654 TTCTTCTGCGGTGTTGTGCT 60.464 50.000 0.00 0.00 0.00 4.40
512 513 0.391228 TCTTCTGCGGTGTTGTGCTA 59.609 50.000 0.00 0.00 0.00 3.49
513 514 1.001974 TCTTCTGCGGTGTTGTGCTAT 59.998 47.619 0.00 0.00 0.00 2.97
514 515 1.129251 CTTCTGCGGTGTTGTGCTATG 59.871 52.381 0.00 0.00 0.00 2.23
515 516 0.673333 TCTGCGGTGTTGTGCTATGG 60.673 55.000 0.00 0.00 0.00 2.74
516 517 1.647545 CTGCGGTGTTGTGCTATGGG 61.648 60.000 0.00 0.00 0.00 4.00
517 518 1.376683 GCGGTGTTGTGCTATGGGA 60.377 57.895 0.00 0.00 0.00 4.37
518 519 1.369091 GCGGTGTTGTGCTATGGGAG 61.369 60.000 0.00 0.00 0.00 4.30
519 520 0.249120 CGGTGTTGTGCTATGGGAGA 59.751 55.000 0.00 0.00 0.00 3.71
520 521 1.338674 CGGTGTTGTGCTATGGGAGAA 60.339 52.381 0.00 0.00 0.00 2.87
521 522 2.359900 GGTGTTGTGCTATGGGAGAAG 58.640 52.381 0.00 0.00 0.00 2.85
522 523 1.740025 GTGTTGTGCTATGGGAGAAGC 59.260 52.381 0.00 0.00 39.25 3.86
523 524 1.350684 TGTTGTGCTATGGGAGAAGCA 59.649 47.619 0.00 0.00 46.11 3.91
526 527 2.612760 TGCTATGGGAGAAGCAGCT 58.387 52.632 0.00 0.00 43.56 4.24
527 528 0.179702 TGCTATGGGAGAAGCAGCTG 59.820 55.000 10.11 10.11 43.56 4.24
528 529 1.165284 GCTATGGGAGAAGCAGCTGC 61.165 60.000 31.53 31.53 38.63 5.25
546 547 2.361610 GGAGGTCCCGACGTACCA 60.362 66.667 16.33 0.00 38.30 3.25
547 548 1.978617 GGAGGTCCCGACGTACCAA 60.979 63.158 16.33 0.00 38.30 3.67
548 549 1.509923 GAGGTCCCGACGTACCAAG 59.490 63.158 16.33 0.00 38.30 3.61
549 550 1.228675 AGGTCCCGACGTACCAAGT 60.229 57.895 16.33 0.00 38.30 3.16
550 551 1.080298 GGTCCCGACGTACCAAGTG 60.080 63.158 10.78 0.00 35.73 3.16
551 552 1.735559 GTCCCGACGTACCAAGTGC 60.736 63.158 0.00 0.00 0.00 4.40
552 553 1.904865 TCCCGACGTACCAAGTGCT 60.905 57.895 0.00 0.00 0.00 4.40
553 554 0.608856 TCCCGACGTACCAAGTGCTA 60.609 55.000 0.00 0.00 0.00 3.49
554 555 0.244450 CCCGACGTACCAAGTGCTAA 59.756 55.000 0.00 0.00 0.00 3.09
555 556 1.343506 CCGACGTACCAAGTGCTAAC 58.656 55.000 0.00 0.00 0.00 2.34
556 557 0.979811 CGACGTACCAAGTGCTAACG 59.020 55.000 0.00 0.00 39.37 3.18
558 559 2.056094 ACGTACCAAGTGCTAACGTC 57.944 50.000 0.00 0.00 42.62 4.34
559 560 1.336240 ACGTACCAAGTGCTAACGTCC 60.336 52.381 0.00 0.00 42.62 4.79
560 561 1.718396 GTACCAAGTGCTAACGTCCC 58.282 55.000 0.00 0.00 0.00 4.46
561 562 0.609662 TACCAAGTGCTAACGTCCCC 59.390 55.000 0.00 0.00 0.00 4.81
562 563 1.740296 CCAAGTGCTAACGTCCCCG 60.740 63.158 0.00 0.00 40.83 5.73
563 564 1.740296 CAAGTGCTAACGTCCCCGG 60.740 63.158 0.00 0.00 38.78 5.73
564 565 3.600898 AAGTGCTAACGTCCCCGGC 62.601 63.158 0.00 0.00 38.78 6.13
579 580 4.137872 GGCGACGACGGGATTGGA 62.138 66.667 9.67 0.00 40.15 3.53
580 581 2.106332 GCGACGACGGGATTGGAT 59.894 61.111 9.67 0.00 40.15 3.41
581 582 1.949631 GCGACGACGGGATTGGATC 60.950 63.158 9.67 0.00 40.15 3.36
589 590 4.579127 GGATTGGATCCGGTTGGG 57.421 61.111 7.39 0.00 40.13 4.12
599 600 2.418368 TCCGGTTGGGAGATGATTTG 57.582 50.000 0.00 0.00 40.94 2.32
600 601 1.064758 TCCGGTTGGGAGATGATTTGG 60.065 52.381 0.00 0.00 40.94 3.28
601 602 1.064758 CCGGTTGGGAGATGATTTGGA 60.065 52.381 0.00 0.00 38.47 3.53
602 603 2.017049 CGGTTGGGAGATGATTTGGAC 58.983 52.381 0.00 0.00 0.00 4.02
603 604 2.379005 GGTTGGGAGATGATTTGGACC 58.621 52.381 0.00 0.00 0.00 4.46
604 605 2.379005 GTTGGGAGATGATTTGGACCC 58.621 52.381 0.00 0.00 37.99 4.46
605 606 0.546122 TGGGAGATGATTTGGACCCG 59.454 55.000 0.00 0.00 40.08 5.28
606 607 0.837272 GGGAGATGATTTGGACCCGA 59.163 55.000 0.00 0.00 0.00 5.14
607 608 1.421646 GGGAGATGATTTGGACCCGAT 59.578 52.381 0.00 0.00 0.00 4.18
608 609 2.158608 GGGAGATGATTTGGACCCGATT 60.159 50.000 0.00 0.00 0.00 3.34
609 610 2.880890 GGAGATGATTTGGACCCGATTG 59.119 50.000 0.00 0.00 0.00 2.67
610 611 2.291741 GAGATGATTTGGACCCGATTGC 59.708 50.000 0.00 0.00 0.00 3.56
611 612 2.023673 GATGATTTGGACCCGATTGCA 58.976 47.619 0.00 0.00 0.00 4.08
612 613 2.142356 TGATTTGGACCCGATTGCAT 57.858 45.000 0.00 0.00 0.00 3.96
613 614 2.455557 TGATTTGGACCCGATTGCATT 58.544 42.857 0.00 0.00 0.00 3.56
614 615 2.830923 TGATTTGGACCCGATTGCATTT 59.169 40.909 0.00 0.00 0.00 2.32
615 616 3.119173 TGATTTGGACCCGATTGCATTTC 60.119 43.478 0.00 0.00 0.00 2.17
616 617 2.214376 TTGGACCCGATTGCATTTCT 57.786 45.000 0.00 0.00 0.00 2.52
617 618 2.214376 TGGACCCGATTGCATTTCTT 57.786 45.000 0.00 0.00 0.00 2.52
618 619 1.818060 TGGACCCGATTGCATTTCTTG 59.182 47.619 0.00 0.00 0.00 3.02
619 620 1.818674 GGACCCGATTGCATTTCTTGT 59.181 47.619 0.00 0.00 0.00 3.16
620 621 2.231235 GGACCCGATTGCATTTCTTGTT 59.769 45.455 0.00 0.00 0.00 2.83
621 622 3.306019 GGACCCGATTGCATTTCTTGTTT 60.306 43.478 0.00 0.00 0.00 2.83
622 623 3.913089 ACCCGATTGCATTTCTTGTTTC 58.087 40.909 0.00 0.00 0.00 2.78
623 624 3.253230 CCCGATTGCATTTCTTGTTTCC 58.747 45.455 0.00 0.00 0.00 3.13
624 625 3.056607 CCCGATTGCATTTCTTGTTTCCT 60.057 43.478 0.00 0.00 0.00 3.36
625 626 3.922240 CCGATTGCATTTCTTGTTTCCTG 59.078 43.478 0.00 0.00 0.00 3.86
626 627 4.549458 CGATTGCATTTCTTGTTTCCTGT 58.451 39.130 0.00 0.00 0.00 4.00
627 628 4.984161 CGATTGCATTTCTTGTTTCCTGTT 59.016 37.500 0.00 0.00 0.00 3.16
628 629 5.117592 CGATTGCATTTCTTGTTTCCTGTTC 59.882 40.000 0.00 0.00 0.00 3.18
629 630 3.963665 TGCATTTCTTGTTTCCTGTTCG 58.036 40.909 0.00 0.00 0.00 3.95
630 631 3.243367 TGCATTTCTTGTTTCCTGTTCGG 60.243 43.478 0.00 0.00 0.00 4.30
631 632 3.857010 GCATTTCTTGTTTCCTGTTCGGG 60.857 47.826 0.00 0.00 0.00 5.14
632 633 1.975660 TTCTTGTTTCCTGTTCGGGG 58.024 50.000 0.00 0.00 0.00 5.73
633 634 0.841289 TCTTGTTTCCTGTTCGGGGT 59.159 50.000 0.00 0.00 0.00 4.95
634 635 1.202722 TCTTGTTTCCTGTTCGGGGTC 60.203 52.381 0.00 0.00 0.00 4.46
635 636 0.179012 TTGTTTCCTGTTCGGGGTCC 60.179 55.000 0.00 0.00 0.00 4.46
636 637 1.057851 TGTTTCCTGTTCGGGGTCCT 61.058 55.000 0.00 0.00 0.00 3.85
637 638 0.321387 GTTTCCTGTTCGGGGTCCTC 60.321 60.000 0.00 0.00 0.00 3.71
638 639 1.486145 TTTCCTGTTCGGGGTCCTCC 61.486 60.000 0.00 0.00 0.00 4.30
639 640 2.606519 CCTGTTCGGGGTCCTCCA 60.607 66.667 0.00 0.00 37.22 3.86
640 641 1.995626 CCTGTTCGGGGTCCTCCAT 60.996 63.158 0.00 0.00 37.22 3.41
641 642 1.221840 CTGTTCGGGGTCCTCCATG 59.778 63.158 0.00 0.00 37.22 3.66
642 643 2.124695 GTTCGGGGTCCTCCATGC 60.125 66.667 0.00 0.00 37.22 4.06
643 644 2.609299 TTCGGGGTCCTCCATGCA 60.609 61.111 0.00 0.00 37.22 3.96
644 645 2.227757 TTCGGGGTCCTCCATGCAA 61.228 57.895 0.00 0.00 37.22 4.08
645 646 1.784301 TTCGGGGTCCTCCATGCAAA 61.784 55.000 0.00 0.00 37.22 3.68
646 647 1.304052 CGGGGTCCTCCATGCAAAA 60.304 57.895 0.00 0.00 37.22 2.44
647 648 0.897863 CGGGGTCCTCCATGCAAAAA 60.898 55.000 0.00 0.00 37.22 1.94
672 673 5.584551 AGGGACTGGTCTGTAATTTTCTT 57.415 39.130 0.67 0.00 37.18 2.52
673 674 5.953571 AGGGACTGGTCTGTAATTTTCTTT 58.046 37.500 0.67 0.00 37.18 2.52
674 675 6.004574 AGGGACTGGTCTGTAATTTTCTTTC 58.995 40.000 0.67 0.00 37.18 2.62
675 676 5.183331 GGGACTGGTCTGTAATTTTCTTTCC 59.817 44.000 0.67 0.00 0.00 3.13
676 677 6.004574 GGACTGGTCTGTAATTTTCTTTCCT 58.995 40.000 0.67 0.00 0.00 3.36
677 678 6.490381 GGACTGGTCTGTAATTTTCTTTCCTT 59.510 38.462 0.67 0.00 0.00 3.36
678 679 7.014326 GGACTGGTCTGTAATTTTCTTTCCTTT 59.986 37.037 0.67 0.00 0.00 3.11
679 680 7.716612 ACTGGTCTGTAATTTTCTTTCCTTTG 58.283 34.615 0.00 0.00 0.00 2.77
680 681 7.342026 ACTGGTCTGTAATTTTCTTTCCTTTGT 59.658 33.333 0.00 0.00 0.00 2.83
681 682 7.488322 TGGTCTGTAATTTTCTTTCCTTTGTG 58.512 34.615 0.00 0.00 0.00 3.33
682 683 7.123547 TGGTCTGTAATTTTCTTTCCTTTGTGT 59.876 33.333 0.00 0.00 0.00 3.72
683 684 7.435192 GGTCTGTAATTTTCTTTCCTTTGTGTG 59.565 37.037 0.00 0.00 0.00 3.82
684 685 7.973944 GTCTGTAATTTTCTTTCCTTTGTGTGT 59.026 33.333 0.00 0.00 0.00 3.72
685 686 8.188139 TCTGTAATTTTCTTTCCTTTGTGTGTC 58.812 33.333 0.00 0.00 0.00 3.67
686 687 7.262048 TGTAATTTTCTTTCCTTTGTGTGTCC 58.738 34.615 0.00 0.00 0.00 4.02
687 688 6.544928 AATTTTCTTTCCTTTGTGTGTCCT 57.455 33.333 0.00 0.00 0.00 3.85
688 689 4.981806 TTTCTTTCCTTTGTGTGTCCTG 57.018 40.909 0.00 0.00 0.00 3.86
689 690 3.644966 TCTTTCCTTTGTGTGTCCTGT 57.355 42.857 0.00 0.00 0.00 4.00
690 691 3.963129 TCTTTCCTTTGTGTGTCCTGTT 58.037 40.909 0.00 0.00 0.00 3.16
691 692 3.694072 TCTTTCCTTTGTGTGTCCTGTTG 59.306 43.478 0.00 0.00 0.00 3.33
692 693 2.799126 TCCTTTGTGTGTCCTGTTGT 57.201 45.000 0.00 0.00 0.00 3.32
693 694 3.916359 TCCTTTGTGTGTCCTGTTGTA 57.084 42.857 0.00 0.00 0.00 2.41
694 695 4.223556 TCCTTTGTGTGTCCTGTTGTAA 57.776 40.909 0.00 0.00 0.00 2.41
695 696 4.590918 TCCTTTGTGTGTCCTGTTGTAAA 58.409 39.130 0.00 0.00 0.00 2.01
709 710 4.898328 GTTGTAAACTACGGTGTGCTAG 57.102 45.455 0.00 0.00 45.32 3.42
710 711 4.301628 GTTGTAAACTACGGTGTGCTAGT 58.698 43.478 0.00 0.00 45.32 2.57
711 712 3.904571 TGTAAACTACGGTGTGCTAGTG 58.095 45.455 0.00 0.00 0.00 2.74
712 713 1.792006 AAACTACGGTGTGCTAGTGC 58.208 50.000 0.00 0.00 40.20 4.40
713 714 0.966920 AACTACGGTGTGCTAGTGCT 59.033 50.000 0.00 0.00 40.48 4.40
714 715 1.830279 ACTACGGTGTGCTAGTGCTA 58.170 50.000 0.00 0.00 40.48 3.49
715 716 1.471684 ACTACGGTGTGCTAGTGCTAC 59.528 52.381 0.00 0.00 40.48 3.58
716 717 0.813184 TACGGTGTGCTAGTGCTACC 59.187 55.000 0.00 0.00 40.85 3.18
717 718 4.496670 GGTGTGCTAGTGCTACCG 57.503 61.111 0.00 0.00 37.38 4.02
718 719 1.888018 GGTGTGCTAGTGCTACCGA 59.112 57.895 0.00 0.00 37.38 4.69
719 720 0.460311 GGTGTGCTAGTGCTACCGAT 59.540 55.000 0.00 0.00 37.38 4.18
720 721 1.536284 GGTGTGCTAGTGCTACCGATC 60.536 57.143 0.00 0.00 37.38 3.69
721 722 1.405821 GTGTGCTAGTGCTACCGATCT 59.594 52.381 0.00 0.00 40.48 2.75
722 723 2.617308 GTGTGCTAGTGCTACCGATCTA 59.383 50.000 0.00 0.00 40.48 1.98
723 724 3.253677 GTGTGCTAGTGCTACCGATCTAT 59.746 47.826 0.00 0.00 40.48 1.98
724 725 3.253432 TGTGCTAGTGCTACCGATCTATG 59.747 47.826 0.00 0.00 40.48 2.23
725 726 2.820197 TGCTAGTGCTACCGATCTATGG 59.180 50.000 0.00 0.00 40.48 2.74
726 727 2.820787 GCTAGTGCTACCGATCTATGGT 59.179 50.000 0.00 0.00 43.62 3.55
727 728 3.256136 GCTAGTGCTACCGATCTATGGTT 59.744 47.826 0.00 0.00 40.96 3.67
728 729 4.458295 GCTAGTGCTACCGATCTATGGTTA 59.542 45.833 0.00 0.00 40.96 2.85
729 730 5.048224 GCTAGTGCTACCGATCTATGGTTAA 60.048 44.000 0.00 0.00 40.96 2.01
730 731 6.350277 GCTAGTGCTACCGATCTATGGTTAAT 60.350 42.308 0.00 0.00 40.96 1.40
731 732 5.784177 AGTGCTACCGATCTATGGTTAATG 58.216 41.667 0.00 0.00 40.96 1.90
732 733 4.389077 GTGCTACCGATCTATGGTTAATGC 59.611 45.833 0.00 0.00 40.96 3.56
733 734 4.039852 TGCTACCGATCTATGGTTAATGCA 59.960 41.667 0.00 0.00 40.96 3.96
734 735 4.627467 GCTACCGATCTATGGTTAATGCAG 59.373 45.833 0.00 0.00 40.96 4.41
735 736 4.689612 ACCGATCTATGGTTAATGCAGT 57.310 40.909 0.00 0.00 35.82 4.40
736 737 5.036117 ACCGATCTATGGTTAATGCAGTT 57.964 39.130 0.00 0.00 35.82 3.16
737 738 5.437060 ACCGATCTATGGTTAATGCAGTTT 58.563 37.500 0.00 0.00 35.82 2.66
738 739 5.527582 ACCGATCTATGGTTAATGCAGTTTC 59.472 40.000 0.00 0.00 35.82 2.78
739 740 5.760253 CCGATCTATGGTTAATGCAGTTTCT 59.240 40.000 0.00 0.00 0.00 2.52
740 741 6.293081 CCGATCTATGGTTAATGCAGTTTCTG 60.293 42.308 0.00 0.00 34.12 3.02
741 742 6.293081 CGATCTATGGTTAATGCAGTTTCTGG 60.293 42.308 0.00 0.00 31.21 3.86
742 743 5.192927 TCTATGGTTAATGCAGTTTCTGGG 58.807 41.667 0.00 0.00 31.21 4.45
743 744 3.237268 TGGTTAATGCAGTTTCTGGGT 57.763 42.857 0.00 0.00 31.21 4.51
744 745 3.153919 TGGTTAATGCAGTTTCTGGGTC 58.846 45.455 0.00 0.00 31.21 4.46
745 746 2.161609 GGTTAATGCAGTTTCTGGGTCG 59.838 50.000 0.00 0.00 31.21 4.79
746 747 1.448985 TAATGCAGTTTCTGGGTCGC 58.551 50.000 0.00 0.00 31.21 5.19
747 748 1.577328 AATGCAGTTTCTGGGTCGCG 61.577 55.000 0.00 0.00 31.21 5.87
748 749 2.665185 GCAGTTTCTGGGTCGCGT 60.665 61.111 5.77 0.00 31.21 6.01
749 750 2.954753 GCAGTTTCTGGGTCGCGTG 61.955 63.158 5.77 0.00 31.21 5.34
750 751 1.300620 CAGTTTCTGGGTCGCGTGA 60.301 57.895 5.77 0.00 0.00 4.35
751 752 1.300697 AGTTTCTGGGTCGCGTGAC 60.301 57.895 20.76 20.76 44.72 3.67
759 760 4.278956 GTCGCGTGACCCATCTTT 57.721 55.556 18.36 0.00 39.30 2.52
760 761 2.540145 GTCGCGTGACCCATCTTTT 58.460 52.632 18.36 0.00 39.30 2.27
761 762 0.165944 GTCGCGTGACCCATCTTTTG 59.834 55.000 18.36 0.00 39.30 2.44
762 763 0.250124 TCGCGTGACCCATCTTTTGT 60.250 50.000 5.77 0.00 0.00 2.83
763 764 0.591170 CGCGTGACCCATCTTTTGTT 59.409 50.000 0.00 0.00 0.00 2.83
764 765 1.399727 CGCGTGACCCATCTTTTGTTC 60.400 52.381 0.00 0.00 0.00 3.18
765 766 1.606668 GCGTGACCCATCTTTTGTTCA 59.393 47.619 0.00 0.00 0.00 3.18
766 767 2.034053 GCGTGACCCATCTTTTGTTCAA 59.966 45.455 0.00 0.00 0.00 2.69
767 768 3.490078 GCGTGACCCATCTTTTGTTCAAA 60.490 43.478 0.00 0.00 0.00 2.69
768 769 4.677584 CGTGACCCATCTTTTGTTCAAAA 58.322 39.130 9.78 9.78 0.00 2.44
769 770 5.105752 CGTGACCCATCTTTTGTTCAAAAA 58.894 37.500 11.06 4.53 0.00 1.94
808 809 1.152652 ATCCGTGGTGGGCACAAAA 60.153 52.632 0.00 0.00 38.76 2.44
809 810 0.757188 ATCCGTGGTGGGCACAAAAA 60.757 50.000 0.00 0.00 38.76 1.94
818 819 2.167487 GTGGGCACAAAAACTTGGAGAA 59.833 45.455 0.00 0.00 0.00 2.87
894 895 0.181350 CCTAGCCACAACCTCCATCC 59.819 60.000 0.00 0.00 0.00 3.51
1008 1016 2.126071 CGTCCGACAATGGCGTCT 60.126 61.111 8.02 0.00 33.54 4.18
1053 1062 3.339141 CTGCCTTGTTAGGTTTCCTCTC 58.661 50.000 0.00 0.00 44.00 3.20
1057 1066 4.827835 GCCTTGTTAGGTTTCCTCTCTTTT 59.172 41.667 0.00 0.00 44.00 2.27
1059 1068 6.489022 GCCTTGTTAGGTTTCCTCTCTTTTTA 59.511 38.462 0.00 0.00 44.00 1.52
1130 1144 2.605601 TCTCTGCTGCAGGCCTCA 60.606 61.111 27.79 8.71 40.92 3.86
1227 1241 0.608130 GGGAATTTCACCAGGTTGGC 59.392 55.000 0.00 0.00 42.67 4.52
1241 1255 1.602605 TTGGCTGTCCTCGACTCGA 60.603 57.895 0.29 0.29 33.15 4.04
1266 1280 1.147600 ATGGTTAATCGCGACCCCC 59.852 57.895 12.93 10.09 34.99 5.40
1267 1281 1.342672 ATGGTTAATCGCGACCCCCT 61.343 55.000 12.93 0.00 34.99 4.79
1268 1282 1.227468 GGTTAATCGCGACCCCCTC 60.227 63.158 12.93 0.00 0.00 4.30
1269 1283 1.227468 GTTAATCGCGACCCCCTCC 60.227 63.158 12.93 0.00 0.00 4.30
1270 1284 2.437396 TTAATCGCGACCCCCTCCC 61.437 63.158 12.93 0.00 0.00 4.30
1393 1418 0.107703 GATCCTCGGGACATTGTGCA 60.108 55.000 10.61 0.00 32.98 4.57
1413 1438 1.533994 GGGCAACAAGAAGGGCCTT 60.534 57.895 21.09 21.09 45.68 4.35
1414 1439 1.121407 GGGCAACAAGAAGGGCCTTT 61.121 55.000 21.92 0.00 45.68 3.11
1505 1533 1.881973 CAGTGACCTGACATGGGTTTG 59.118 52.381 0.00 0.00 41.50 2.93
1700 1728 0.930726 TTCTTGGGGTGGAGGTGTTT 59.069 50.000 0.00 0.00 0.00 2.83
1770 1798 2.514582 TCCAACAAAGGGGGACTTGTAA 59.485 45.455 0.00 0.00 39.96 2.41
1794 1822 1.448540 GCTCCTCATCACACCCACG 60.449 63.158 0.00 0.00 0.00 4.94
1796 1824 2.436646 CCTCATCACACCCACGCC 60.437 66.667 0.00 0.00 0.00 5.68
1806 1834 2.058595 ACCCACGCCAGCTACCTAG 61.059 63.158 0.00 0.00 0.00 3.02
1808 1836 2.797278 CCACGCCAGCTACCTAGGG 61.797 68.421 14.81 0.00 0.00 3.53
1815 1843 1.209747 CCAGCTACCTAGGGTTCAACC 59.790 57.143 14.81 0.00 37.09 3.77
1816 1844 2.188817 CAGCTACCTAGGGTTCAACCT 58.811 52.381 14.81 0.00 44.75 3.50
1817 1845 3.371965 CAGCTACCTAGGGTTCAACCTA 58.628 50.000 14.81 0.00 42.09 3.08
2145 2735 4.746466 TCTTTAGGGGAATTTTGCCTTGA 58.254 39.130 0.69 0.00 38.90 3.02
2149 2739 1.552254 GGGGAATTTTGCCTTGAGGGA 60.552 52.381 0.69 0.00 38.90 4.20
2150 2740 2.470990 GGGAATTTTGCCTTGAGGGAT 58.529 47.619 0.00 0.00 34.74 3.85
2151 2741 2.840038 GGGAATTTTGCCTTGAGGGATT 59.160 45.455 0.00 0.00 34.74 3.01
2152 2742 3.264193 GGGAATTTTGCCTTGAGGGATTT 59.736 43.478 0.00 0.00 34.74 2.17
2153 2743 4.263462 GGGAATTTTGCCTTGAGGGATTTT 60.263 41.667 0.00 0.00 34.74 1.82
2154 2744 4.937620 GGAATTTTGCCTTGAGGGATTTTC 59.062 41.667 0.00 0.73 34.74 2.29
2188 2778 8.744568 TGTATCTGTGTTTGCCATGAATATTA 57.255 30.769 0.00 0.00 0.00 0.98
2237 2915 3.149981 AGACTTTCAAGTAGCAAAGGCC 58.850 45.455 0.00 0.00 38.26 5.19
2449 3139 8.864069 AGAAGTCACTTGATTCATAAGATACG 57.136 34.615 0.00 0.00 0.00 3.06
2450 3140 8.687242 AGAAGTCACTTGATTCATAAGATACGA 58.313 33.333 0.00 0.00 0.00 3.43
2451 3141 9.302345 GAAGTCACTTGATTCATAAGATACGAA 57.698 33.333 0.00 0.00 0.00 3.85
2452 3142 9.823647 AAGTCACTTGATTCATAAGATACGAAT 57.176 29.630 0.00 0.00 32.15 3.34
2453 3143 9.823647 AGTCACTTGATTCATAAGATACGAATT 57.176 29.630 0.00 0.00 29.67 2.17
2463 3153 9.976255 TTCATAAGATACGAATTTTTACGTTGG 57.024 29.630 0.00 0.00 42.61 3.77
2464 3154 9.153721 TCATAAGATACGAATTTTTACGTTGGT 57.846 29.630 0.00 0.00 42.61 3.67
2465 3155 9.763465 CATAAGATACGAATTTTTACGTTGGTT 57.237 29.630 0.00 0.00 42.61 3.67
2466 3156 9.977762 ATAAGATACGAATTTTTACGTTGGTTC 57.022 29.630 0.00 0.00 42.61 3.62
2467 3157 7.424227 AGATACGAATTTTTACGTTGGTTCA 57.576 32.000 0.00 0.00 42.61 3.18
2468 3158 7.515643 AGATACGAATTTTTACGTTGGTTCAG 58.484 34.615 0.00 0.00 42.61 3.02
2469 3159 5.738118 ACGAATTTTTACGTTGGTTCAGA 57.262 34.783 0.00 0.00 39.75 3.27
2470 3160 5.504392 ACGAATTTTTACGTTGGTTCAGAC 58.496 37.500 0.00 0.00 39.75 3.51
2471 3161 5.295045 ACGAATTTTTACGTTGGTTCAGACT 59.705 36.000 0.00 0.00 39.75 3.24
2472 3162 6.479660 ACGAATTTTTACGTTGGTTCAGACTA 59.520 34.615 0.00 0.00 39.75 2.59
2473 3163 7.011295 ACGAATTTTTACGTTGGTTCAGACTAA 59.989 33.333 0.00 0.00 39.75 2.24
2474 3164 8.013378 CGAATTTTTACGTTGGTTCAGACTAAT 58.987 33.333 0.00 0.00 0.00 1.73
2475 3165 9.113876 GAATTTTTACGTTGGTTCAGACTAATG 57.886 33.333 0.00 0.00 38.70 1.90
2476 3166 7.556733 TTTTTACGTTGGTTCAGACTAATGT 57.443 32.000 0.00 5.93 45.10 2.71
2477 3167 6.774354 TTTACGTTGGTTCAGACTAATGTC 57.226 37.500 0.00 0.00 43.01 3.06
2478 3168 4.330944 ACGTTGGTTCAGACTAATGTCA 57.669 40.909 0.00 0.00 41.02 3.58
2479 3169 4.894784 ACGTTGGTTCAGACTAATGTCAT 58.105 39.130 0.00 0.00 41.02 3.06
2480 3170 5.305585 ACGTTGGTTCAGACTAATGTCATT 58.694 37.500 3.06 3.06 41.02 2.57
2481 3171 5.763204 ACGTTGGTTCAGACTAATGTCATTT 59.237 36.000 2.79 0.00 41.02 2.32
2482 3172 6.262273 ACGTTGGTTCAGACTAATGTCATTTT 59.738 34.615 2.79 0.00 41.02 1.82
2483 3173 7.138736 CGTTGGTTCAGACTAATGTCATTTTT 58.861 34.615 2.79 0.00 45.20 1.94
2484 3174 7.323656 CGTTGGTTCAGACTAATGTCATTTTTC 59.676 37.037 2.79 1.07 45.20 2.29
2485 3175 7.214467 TGGTTCAGACTAATGTCATTTTTCC 57.786 36.000 2.79 0.00 45.20 3.13
2486 3176 7.004086 TGGTTCAGACTAATGTCATTTTTCCT 58.996 34.615 2.79 0.00 45.20 3.36
2487 3177 7.505585 TGGTTCAGACTAATGTCATTTTTCCTT 59.494 33.333 2.79 0.00 45.20 3.36
2488 3178 8.360390 GGTTCAGACTAATGTCATTTTTCCTTT 58.640 33.333 2.79 0.00 45.20 3.11
2568 3317 6.357980 GCTTAGTGCTGCAAAGAAAATTTTC 58.642 36.000 21.00 21.00 38.95 2.29
2624 3374 5.362430 AGAATTGCTGTGAACCCAAGTAAAA 59.638 36.000 0.00 0.00 0.00 1.52
2653 3403 7.392393 GGCCTAAAGTTTTCTTCATAGGTTGTA 59.608 37.037 0.00 0.00 40.16 2.41
2665 3415 1.601166 AGGTTGTACCAAAGGAACGC 58.399 50.000 0.00 0.00 41.95 4.84
2783 3536 3.588955 CACAAAAAGCAATCTAAGGCCC 58.411 45.455 0.00 0.00 0.00 5.80
2787 3540 2.725221 AAGCAATCTAAGGCCCTCAG 57.275 50.000 0.00 0.00 0.00 3.35
2851 3604 8.990163 ATTTACAGGGAAACAAGTAGAAAGAA 57.010 30.769 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 7.863901 AATCCTAGACCTGCTATTTACAGAT 57.136 36.000 0.00 0.00 37.32 2.90
23 24 5.836024 AGACTCGATCTAATCCTAGACCT 57.164 43.478 0.00 0.00 36.98 3.85
108 109 4.514577 CCGACGCTAGCCACCAGG 62.515 72.222 9.66 2.05 38.23 4.45
113 114 4.367023 AAACGCCGACGCTAGCCA 62.367 61.111 9.66 0.00 45.53 4.75
114 115 3.551915 GAAACGCCGACGCTAGCC 61.552 66.667 9.66 0.00 45.53 3.93
115 116 2.506438 AGAAACGCCGACGCTAGC 60.506 61.111 4.06 4.06 45.53 3.42
116 117 0.525668 ATCAGAAACGCCGACGCTAG 60.526 55.000 0.00 0.00 45.53 3.42
117 118 0.800683 CATCAGAAACGCCGACGCTA 60.801 55.000 0.00 0.00 45.53 4.26
118 119 2.094659 CATCAGAAACGCCGACGCT 61.095 57.895 0.00 0.00 45.53 5.07
119 120 2.395690 CATCAGAAACGCCGACGC 59.604 61.111 0.00 0.00 45.53 5.19
121 122 0.165944 CAACCATCAGAAACGCCGAC 59.834 55.000 0.00 0.00 0.00 4.79
122 123 1.573829 GCAACCATCAGAAACGCCGA 61.574 55.000 0.00 0.00 0.00 5.54
123 124 1.154225 GCAACCATCAGAAACGCCG 60.154 57.895 0.00 0.00 0.00 6.46
124 125 1.154225 CGCAACCATCAGAAACGCC 60.154 57.895 0.00 0.00 0.00 5.68
125 126 1.154225 CCGCAACCATCAGAAACGC 60.154 57.895 0.00 0.00 0.00 4.84
126 127 0.110238 CACCGCAACCATCAGAAACG 60.110 55.000 0.00 0.00 0.00 3.60
127 128 0.240945 CCACCGCAACCATCAGAAAC 59.759 55.000 0.00 0.00 0.00 2.78
128 129 1.523154 GCCACCGCAACCATCAGAAA 61.523 55.000 0.00 0.00 34.03 2.52
129 130 1.971167 GCCACCGCAACCATCAGAA 60.971 57.895 0.00 0.00 34.03 3.02
130 131 2.359850 GCCACCGCAACCATCAGA 60.360 61.111 0.00 0.00 34.03 3.27
131 132 3.803082 CGCCACCGCAACCATCAG 61.803 66.667 0.00 0.00 34.03 2.90
132 133 4.321966 TCGCCACCGCAACCATCA 62.322 61.111 0.00 0.00 34.03 3.07
133 134 3.499737 CTCGCCACCGCAACCATC 61.500 66.667 0.00 0.00 34.03 3.51
154 155 4.680237 TCCTCCGGTTGCACGCAG 62.680 66.667 0.00 0.00 0.00 5.18
155 156 3.758973 TTTCCTCCGGTTGCACGCA 62.759 57.895 0.00 0.00 0.00 5.24
156 157 2.332654 ATTTCCTCCGGTTGCACGC 61.333 57.895 0.00 0.00 0.00 5.34
157 158 0.953471 TCATTTCCTCCGGTTGCACG 60.953 55.000 0.00 0.00 0.00 5.34
158 159 0.521735 GTCATTTCCTCCGGTTGCAC 59.478 55.000 0.00 0.00 0.00 4.57
159 160 0.953471 CGTCATTTCCTCCGGTTGCA 60.953 55.000 0.00 0.00 0.00 4.08
160 161 1.644786 CCGTCATTTCCTCCGGTTGC 61.645 60.000 0.00 0.00 35.78 4.17
161 162 1.644786 GCCGTCATTTCCTCCGGTTG 61.645 60.000 0.00 0.00 42.36 3.77
162 163 1.376812 GCCGTCATTTCCTCCGGTT 60.377 57.895 0.00 0.00 42.36 4.44
163 164 2.267961 GCCGTCATTTCCTCCGGT 59.732 61.111 0.00 0.00 42.36 5.28
164 165 2.890474 CGCCGTCATTTCCTCCGG 60.890 66.667 0.00 0.00 43.22 5.14
165 166 2.890474 CCGCCGTCATTTCCTCCG 60.890 66.667 0.00 0.00 0.00 4.63
166 167 3.202706 GCCGCCGTCATTTCCTCC 61.203 66.667 0.00 0.00 0.00 4.30
167 168 3.564027 CGCCGCCGTCATTTCCTC 61.564 66.667 0.00 0.00 0.00 3.71
168 169 4.077184 TCGCCGCCGTCATTTCCT 62.077 61.111 0.00 0.00 35.54 3.36
169 170 3.861263 GTCGCCGCCGTCATTTCC 61.861 66.667 0.00 0.00 35.54 3.13
170 171 2.799540 GAGTCGCCGCCGTCATTTC 61.800 63.158 0.00 0.00 35.54 2.17
171 172 2.813908 GAGTCGCCGCCGTCATTT 60.814 61.111 0.00 0.00 35.54 2.32
172 173 4.814294 GGAGTCGCCGCCGTCATT 62.814 66.667 0.00 0.00 35.54 2.57
177 178 2.622903 TATTGAAGGAGTCGCCGCCG 62.623 60.000 0.00 0.00 43.43 6.46
178 179 0.461339 TTATTGAAGGAGTCGCCGCC 60.461 55.000 0.00 0.00 43.43 6.13
179 180 0.931005 CTTATTGAAGGAGTCGCCGC 59.069 55.000 0.00 0.00 43.43 6.53
180 181 0.931005 GCTTATTGAAGGAGTCGCCG 59.069 55.000 0.00 0.00 43.43 6.46
181 182 2.205911 GAGCTTATTGAAGGAGTCGCC 58.794 52.381 0.00 0.00 32.84 5.54
182 183 1.855360 CGAGCTTATTGAAGGAGTCGC 59.145 52.381 0.00 0.00 32.84 5.19
183 184 3.152261 ACGAGCTTATTGAAGGAGTCG 57.848 47.619 0.00 0.00 32.84 4.18
184 185 4.092091 CACAACGAGCTTATTGAAGGAGTC 59.908 45.833 15.60 0.00 32.84 3.36
185 186 3.997021 CACAACGAGCTTATTGAAGGAGT 59.003 43.478 15.60 0.00 32.84 3.85
186 187 3.997021 ACACAACGAGCTTATTGAAGGAG 59.003 43.478 15.60 4.96 32.84 3.69
187 188 4.002906 ACACAACGAGCTTATTGAAGGA 57.997 40.909 15.60 0.00 32.84 3.36
188 189 4.749245 AACACAACGAGCTTATTGAAGG 57.251 40.909 15.60 8.39 32.84 3.46
189 190 5.049405 AGGAAACACAACGAGCTTATTGAAG 60.049 40.000 15.60 10.54 35.60 3.02
190 191 4.819630 AGGAAACACAACGAGCTTATTGAA 59.180 37.500 15.60 0.00 0.00 2.69
191 192 4.213270 CAGGAAACACAACGAGCTTATTGA 59.787 41.667 15.60 0.00 0.00 2.57
192 193 4.024048 ACAGGAAACACAACGAGCTTATTG 60.024 41.667 8.85 8.85 0.00 1.90
193 194 4.134563 ACAGGAAACACAACGAGCTTATT 58.865 39.130 0.00 0.00 0.00 1.40
194 195 3.740115 ACAGGAAACACAACGAGCTTAT 58.260 40.909 0.00 0.00 0.00 1.73
195 196 3.188159 ACAGGAAACACAACGAGCTTA 57.812 42.857 0.00 0.00 0.00 3.09
196 197 2.038387 ACAGGAAACACAACGAGCTT 57.962 45.000 0.00 0.00 0.00 3.74
197 198 2.038387 AACAGGAAACACAACGAGCT 57.962 45.000 0.00 0.00 0.00 4.09
198 199 3.303791 CCTTAACAGGAAACACAACGAGC 60.304 47.826 0.00 0.00 44.19 5.03
199 200 3.875134 ACCTTAACAGGAAACACAACGAG 59.125 43.478 0.00 0.00 44.19 4.18
200 201 3.623960 CACCTTAACAGGAAACACAACGA 59.376 43.478 0.00 0.00 44.19 3.85
201 202 3.242936 CCACCTTAACAGGAAACACAACG 60.243 47.826 0.00 0.00 44.19 4.10
202 203 3.949113 TCCACCTTAACAGGAAACACAAC 59.051 43.478 0.00 0.00 44.19 3.32
203 204 4.204012 CTCCACCTTAACAGGAAACACAA 58.796 43.478 0.00 0.00 44.19 3.33
204 205 3.434453 CCTCCACCTTAACAGGAAACACA 60.434 47.826 0.00 0.00 44.19 3.72
205 206 3.146847 CCTCCACCTTAACAGGAAACAC 58.853 50.000 0.00 0.00 44.19 3.32
206 207 2.488347 GCCTCCACCTTAACAGGAAACA 60.488 50.000 0.00 0.00 44.19 2.83
207 208 2.160205 GCCTCCACCTTAACAGGAAAC 58.840 52.381 0.00 0.00 44.19 2.78
208 209 1.074889 GGCCTCCACCTTAACAGGAAA 59.925 52.381 0.00 0.00 44.19 3.13
209 210 0.696501 GGCCTCCACCTTAACAGGAA 59.303 55.000 0.00 0.00 44.19 3.36
210 211 1.205460 GGGCCTCCACCTTAACAGGA 61.205 60.000 0.84 0.00 44.19 3.86
212 213 1.078426 CGGGCCTCCACCTTAACAG 60.078 63.158 0.84 0.00 0.00 3.16
213 214 2.598787 CCGGGCCTCCACCTTAACA 61.599 63.158 0.84 0.00 0.00 2.41
214 215 2.271173 CCGGGCCTCCACCTTAAC 59.729 66.667 0.84 0.00 0.00 2.01
215 216 3.723922 GCCGGGCCTCCACCTTAA 61.724 66.667 8.12 0.00 0.00 1.85
216 217 4.733725 AGCCGGGCCTCCACCTTA 62.734 66.667 17.02 0.00 0.00 2.69
223 224 4.228567 GTAGAGCAGCCGGGCCTC 62.229 72.222 17.02 15.88 0.00 4.70
230 231 2.498644 AAAGAAAGGGTAGAGCAGCC 57.501 50.000 0.00 0.00 45.89 4.85
231 232 3.412386 TGAAAAGAAAGGGTAGAGCAGC 58.588 45.455 0.00 0.00 0.00 5.25
247 248 0.958091 CCACCACGATGGCTTGAAAA 59.042 50.000 4.23 0.00 42.67 2.29
248 249 0.179004 ACCACCACGATGGCTTGAAA 60.179 50.000 4.23 0.00 44.33 2.69
249 250 0.888736 CACCACCACGATGGCTTGAA 60.889 55.000 4.23 0.00 44.33 2.69
250 251 1.302431 CACCACCACGATGGCTTGA 60.302 57.895 4.23 0.00 44.33 3.02
251 252 2.334946 CCACCACCACGATGGCTTG 61.335 63.158 4.23 0.39 44.33 4.01
252 253 1.852157 ATCCACCACCACGATGGCTT 61.852 55.000 4.23 0.00 44.33 4.35
253 254 2.300967 ATCCACCACCACGATGGCT 61.301 57.895 4.23 0.00 44.33 4.75
254 255 2.114670 CATCCACCACCACGATGGC 61.115 63.158 4.23 0.00 44.33 4.40
255 256 1.451927 CCATCCACCACCACGATGG 60.452 63.158 1.17 1.17 45.21 3.51
256 257 0.462581 CTCCATCCACCACCACGATG 60.463 60.000 0.00 0.00 34.44 3.84
257 258 1.626356 CCTCCATCCACCACCACGAT 61.626 60.000 0.00 0.00 0.00 3.73
258 259 2.290287 CCTCCATCCACCACCACGA 61.290 63.158 0.00 0.00 0.00 4.35
259 260 1.836999 TTCCTCCATCCACCACCACG 61.837 60.000 0.00 0.00 0.00 4.94
260 261 0.035056 CTTCCTCCATCCACCACCAC 60.035 60.000 0.00 0.00 0.00 4.16
261 262 0.178876 TCTTCCTCCATCCACCACCA 60.179 55.000 0.00 0.00 0.00 4.17
262 263 0.991920 TTCTTCCTCCATCCACCACC 59.008 55.000 0.00 0.00 0.00 4.61
263 264 1.065126 CCTTCTTCCTCCATCCACCAC 60.065 57.143 0.00 0.00 0.00 4.16
264 265 1.203428 TCCTTCTTCCTCCATCCACCA 60.203 52.381 0.00 0.00 0.00 4.17
265 266 1.488393 CTCCTTCTTCCTCCATCCACC 59.512 57.143 0.00 0.00 0.00 4.61
266 267 2.433970 CTCTCCTTCTTCCTCCATCCAC 59.566 54.545 0.00 0.00 0.00 4.02
267 268 2.628021 CCTCTCCTTCTTCCTCCATCCA 60.628 54.545 0.00 0.00 0.00 3.41
268 269 2.046292 CCTCTCCTTCTTCCTCCATCC 58.954 57.143 0.00 0.00 0.00 3.51
269 270 1.416030 GCCTCTCCTTCTTCCTCCATC 59.584 57.143 0.00 0.00 0.00 3.51
270 271 1.506025 GCCTCTCCTTCTTCCTCCAT 58.494 55.000 0.00 0.00 0.00 3.41
271 272 0.972983 CGCCTCTCCTTCTTCCTCCA 60.973 60.000 0.00 0.00 0.00 3.86
272 273 1.681486 CCGCCTCTCCTTCTTCCTCC 61.681 65.000 0.00 0.00 0.00 4.30
273 274 1.819905 CCGCCTCTCCTTCTTCCTC 59.180 63.158 0.00 0.00 0.00 3.71
274 275 2.363172 GCCGCCTCTCCTTCTTCCT 61.363 63.158 0.00 0.00 0.00 3.36
275 276 2.188207 GCCGCCTCTCCTTCTTCC 59.812 66.667 0.00 0.00 0.00 3.46
276 277 2.202810 CGCCGCCTCTCCTTCTTC 60.203 66.667 0.00 0.00 0.00 2.87
277 278 2.680352 TCGCCGCCTCTCCTTCTT 60.680 61.111 0.00 0.00 0.00 2.52
278 279 3.144193 CTCGCCGCCTCTCCTTCT 61.144 66.667 0.00 0.00 0.00 2.85
279 280 4.882396 GCTCGCCGCCTCTCCTTC 62.882 72.222 0.00 0.00 0.00 3.46
288 289 3.793144 CAAAGTCCAGCTCGCCGC 61.793 66.667 0.00 0.00 39.57 6.53
289 290 3.793144 GCAAAGTCCAGCTCGCCG 61.793 66.667 0.00 0.00 0.00 6.46
290 291 2.669569 TGCAAAGTCCAGCTCGCC 60.670 61.111 0.00 0.00 0.00 5.54
291 292 1.510480 AACTGCAAAGTCCAGCTCGC 61.510 55.000 0.00 0.00 33.65 5.03
292 293 0.947244 AAACTGCAAAGTCCAGCTCG 59.053 50.000 0.00 0.00 33.65 5.03
293 294 1.000938 CCAAACTGCAAAGTCCAGCTC 60.001 52.381 0.00 0.00 33.65 4.09
294 295 1.035139 CCAAACTGCAAAGTCCAGCT 58.965 50.000 0.00 0.00 33.65 4.24
295 296 0.032540 CCCAAACTGCAAAGTCCAGC 59.967 55.000 0.00 0.00 33.65 4.85
296 297 1.691196 TCCCAAACTGCAAAGTCCAG 58.309 50.000 0.00 0.00 36.41 3.86
297 298 2.031120 CTTCCCAAACTGCAAAGTCCA 58.969 47.619 0.00 0.00 0.00 4.02
298 299 1.341209 CCTTCCCAAACTGCAAAGTCC 59.659 52.381 0.00 0.00 0.00 3.85
299 300 2.294512 CTCCTTCCCAAACTGCAAAGTC 59.705 50.000 0.00 0.00 0.00 3.01
300 301 2.310538 CTCCTTCCCAAACTGCAAAGT 58.689 47.619 0.00 0.00 0.00 2.66
301 302 1.000171 GCTCCTTCCCAAACTGCAAAG 60.000 52.381 0.00 0.00 0.00 2.77
302 303 1.039856 GCTCCTTCCCAAACTGCAAA 58.960 50.000 0.00 0.00 0.00 3.68
303 304 0.185901 AGCTCCTTCCCAAACTGCAA 59.814 50.000 0.00 0.00 0.00 4.08
304 305 0.250901 GAGCTCCTTCCCAAACTGCA 60.251 55.000 0.87 0.00 0.00 4.41
305 306 0.250901 TGAGCTCCTTCCCAAACTGC 60.251 55.000 12.15 0.00 0.00 4.40
306 307 2.363683 GATGAGCTCCTTCCCAAACTG 58.636 52.381 12.15 0.00 0.00 3.16
307 308 1.283321 GGATGAGCTCCTTCCCAAACT 59.717 52.381 17.96 0.00 41.29 2.66
308 309 1.756430 GGATGAGCTCCTTCCCAAAC 58.244 55.000 17.96 0.00 41.29 2.93
317 318 0.842635 ACCCATTGAGGATGAGCTCC 59.157 55.000 12.15 0.00 45.33 4.70
318 319 2.686915 CAAACCCATTGAGGATGAGCTC 59.313 50.000 6.82 6.82 41.85 4.09
319 320 2.309755 TCAAACCCATTGAGGATGAGCT 59.690 45.455 0.00 0.00 43.08 4.09
320 321 2.726821 TCAAACCCATTGAGGATGAGC 58.273 47.619 0.00 0.00 43.08 4.26
328 329 1.610624 GCCTCGTCTCAAACCCATTGA 60.611 52.381 0.00 0.00 45.71 2.57
329 330 0.804989 GCCTCGTCTCAAACCCATTG 59.195 55.000 0.00 0.00 40.58 2.82
330 331 0.400213 TGCCTCGTCTCAAACCCATT 59.600 50.000 0.00 0.00 0.00 3.16
331 332 0.400213 TTGCCTCGTCTCAAACCCAT 59.600 50.000 0.00 0.00 0.00 4.00
332 333 0.534203 GTTGCCTCGTCTCAAACCCA 60.534 55.000 0.00 0.00 0.00 4.51
333 334 1.566018 CGTTGCCTCGTCTCAAACCC 61.566 60.000 0.00 0.00 0.00 4.11
334 335 1.566018 CCGTTGCCTCGTCTCAAACC 61.566 60.000 0.00 0.00 0.00 3.27
335 336 1.860078 CCGTTGCCTCGTCTCAAAC 59.140 57.895 0.00 0.00 0.00 2.93
336 337 1.959226 GCCGTTGCCTCGTCTCAAA 60.959 57.895 0.00 0.00 0.00 2.69
337 338 2.357034 GCCGTTGCCTCGTCTCAA 60.357 61.111 0.00 0.00 0.00 3.02
338 339 4.717629 CGCCGTTGCCTCGTCTCA 62.718 66.667 0.00 0.00 0.00 3.27
378 379 4.131088 GGCGAGACGGTGAGGACC 62.131 72.222 0.00 0.00 39.14 4.46
379 380 2.227089 AATGGCGAGACGGTGAGGAC 62.227 60.000 0.00 0.00 0.00 3.85
380 381 1.982395 AATGGCGAGACGGTGAGGA 60.982 57.895 0.00 0.00 0.00 3.71
381 382 1.811266 CAATGGCGAGACGGTGAGG 60.811 63.158 0.00 0.00 0.00 3.86
382 383 0.389817 TTCAATGGCGAGACGGTGAG 60.390 55.000 0.00 0.00 0.00 3.51
383 384 0.249120 ATTCAATGGCGAGACGGTGA 59.751 50.000 0.00 0.00 0.00 4.02
384 385 1.934589 TATTCAATGGCGAGACGGTG 58.065 50.000 0.00 0.00 0.00 4.94
385 386 2.483876 CATATTCAATGGCGAGACGGT 58.516 47.619 0.00 0.00 0.00 4.83
386 387 1.195448 GCATATTCAATGGCGAGACGG 59.805 52.381 0.00 0.00 0.00 4.79
387 388 2.096565 CAGCATATTCAATGGCGAGACG 60.097 50.000 0.00 0.00 0.00 4.18
388 389 2.225019 CCAGCATATTCAATGGCGAGAC 59.775 50.000 0.00 0.00 0.00 3.36
389 390 2.497138 CCAGCATATTCAATGGCGAGA 58.503 47.619 0.00 0.00 0.00 4.04
390 391 2.983402 CCAGCATATTCAATGGCGAG 57.017 50.000 0.00 0.00 0.00 5.03
394 395 1.608055 TCGGCCAGCATATTCAATGG 58.392 50.000 2.24 0.00 35.84 3.16
395 396 2.030540 CCTTCGGCCAGCATATTCAATG 60.031 50.000 2.24 0.00 0.00 2.82
396 397 2.233271 CCTTCGGCCAGCATATTCAAT 58.767 47.619 2.24 0.00 0.00 2.57
397 398 1.679139 CCTTCGGCCAGCATATTCAA 58.321 50.000 2.24 0.00 0.00 2.69
398 399 0.179020 CCCTTCGGCCAGCATATTCA 60.179 55.000 2.24 0.00 0.00 2.57
399 400 2.633860 CCCTTCGGCCAGCATATTC 58.366 57.895 2.24 0.00 0.00 1.75
400 401 4.907457 CCCTTCGGCCAGCATATT 57.093 55.556 2.24 0.00 0.00 1.28
415 416 2.438614 GAAGAGAAAGGGCCGCCC 60.439 66.667 22.09 22.09 45.90 6.13
416 417 2.438614 GGAAGAGAAAGGGCCGCC 60.439 66.667 0.00 0.00 0.00 6.13
417 418 1.450491 GAGGAAGAGAAAGGGCCGC 60.450 63.158 0.00 0.00 0.00 6.53
418 419 1.222113 GGAGGAAGAGAAAGGGCCG 59.778 63.158 0.00 0.00 0.00 6.13
419 420 1.610327 GGGAGGAAGAGAAAGGGCC 59.390 63.158 0.00 0.00 0.00 5.80
420 421 1.222113 CGGGAGGAAGAGAAAGGGC 59.778 63.158 0.00 0.00 0.00 5.19
439 440 2.049627 CTCCCATCTAGGCACCAGGC 62.050 65.000 0.00 0.00 43.74 4.85
440 441 1.414061 CCTCCCATCTAGGCACCAGG 61.414 65.000 0.00 0.00 35.39 4.45
441 442 2.140405 CCTCCCATCTAGGCACCAG 58.860 63.158 0.00 0.00 35.39 4.00
442 443 4.399764 CCTCCCATCTAGGCACCA 57.600 61.111 0.00 0.00 35.39 4.17
447 448 1.500474 TGAACTGCCTCCCATCTAGG 58.500 55.000 0.00 0.00 37.17 3.02
448 449 2.971330 AGATGAACTGCCTCCCATCTAG 59.029 50.000 0.00 0.00 42.57 2.43
449 450 2.968574 GAGATGAACTGCCTCCCATCTA 59.031 50.000 0.00 0.00 43.88 1.98
450 451 1.767681 GAGATGAACTGCCTCCCATCT 59.232 52.381 0.00 0.00 45.77 2.90
451 452 1.202746 GGAGATGAACTGCCTCCCATC 60.203 57.143 0.00 0.00 40.35 3.51
452 453 0.842635 GGAGATGAACTGCCTCCCAT 59.157 55.000 0.00 0.00 40.35 4.00
453 454 1.617018 CGGAGATGAACTGCCTCCCA 61.617 60.000 0.00 0.00 42.60 4.37
454 455 1.144936 CGGAGATGAACTGCCTCCC 59.855 63.158 0.00 0.00 42.60 4.30
455 456 0.537188 TTCGGAGATGAACTGCCTCC 59.463 55.000 0.00 0.00 42.24 4.30
456 457 2.478831 GATTCGGAGATGAACTGCCTC 58.521 52.381 0.00 0.00 35.04 4.70
457 458 1.202463 CGATTCGGAGATGAACTGCCT 60.202 52.381 0.00 0.00 35.04 4.75
458 459 1.212616 CGATTCGGAGATGAACTGCC 58.787 55.000 0.00 0.00 35.04 4.85
470 471 7.944796 GAAGAAGCCTTAGACTCCGATTCGG 62.945 52.000 19.16 19.16 39.62 4.30
471 472 2.359531 AGAAGCCTTAGACTCCGATTCG 59.640 50.000 0.00 0.00 0.00 3.34
472 473 4.098807 AGAAGAAGCCTTAGACTCCGATTC 59.901 45.833 0.00 0.00 31.62 2.52
473 474 4.027437 AGAAGAAGCCTTAGACTCCGATT 58.973 43.478 0.00 0.00 31.62 3.34
474 475 3.637769 AGAAGAAGCCTTAGACTCCGAT 58.362 45.455 0.00 0.00 31.62 4.18
475 476 3.088789 AGAAGAAGCCTTAGACTCCGA 57.911 47.619 0.00 0.00 31.62 4.55
476 477 3.445805 AGAAGAAGAAGCCTTAGACTCCG 59.554 47.826 0.00 0.00 31.62 4.63
477 478 4.754322 CAGAAGAAGAAGCCTTAGACTCC 58.246 47.826 0.00 0.00 31.62 3.85
478 479 4.180817 GCAGAAGAAGAAGCCTTAGACTC 58.819 47.826 0.00 0.00 31.62 3.36
479 480 3.367910 CGCAGAAGAAGAAGCCTTAGACT 60.368 47.826 0.00 0.00 31.62 3.24
480 481 2.926838 CGCAGAAGAAGAAGCCTTAGAC 59.073 50.000 0.00 0.00 31.62 2.59
481 482 2.093973 CCGCAGAAGAAGAAGCCTTAGA 60.094 50.000 0.00 0.00 31.62 2.10
482 483 2.275318 CCGCAGAAGAAGAAGCCTTAG 58.725 52.381 0.00 0.00 31.62 2.18
483 484 1.623811 ACCGCAGAAGAAGAAGCCTTA 59.376 47.619 0.00 0.00 31.62 2.69
484 485 0.398318 ACCGCAGAAGAAGAAGCCTT 59.602 50.000 0.00 0.00 34.81 4.35
485 486 0.321122 CACCGCAGAAGAAGAAGCCT 60.321 55.000 0.00 0.00 0.00 4.58
486 487 0.603975 ACACCGCAGAAGAAGAAGCC 60.604 55.000 0.00 0.00 0.00 4.35
487 488 1.069636 CAACACCGCAGAAGAAGAAGC 60.070 52.381 0.00 0.00 0.00 3.86
488 489 2.032549 CACAACACCGCAGAAGAAGAAG 60.033 50.000 0.00 0.00 0.00 2.85
489 490 1.939934 CACAACACCGCAGAAGAAGAA 59.060 47.619 0.00 0.00 0.00 2.52
490 491 1.581934 CACAACACCGCAGAAGAAGA 58.418 50.000 0.00 0.00 0.00 2.87
491 492 0.040958 GCACAACACCGCAGAAGAAG 60.041 55.000 0.00 0.00 0.00 2.85
492 493 0.463654 AGCACAACACCGCAGAAGAA 60.464 50.000 0.00 0.00 0.00 2.52
493 494 0.391228 TAGCACAACACCGCAGAAGA 59.609 50.000 0.00 0.00 0.00 2.87
494 495 1.129251 CATAGCACAACACCGCAGAAG 59.871 52.381 0.00 0.00 0.00 2.85
495 496 1.155889 CATAGCACAACACCGCAGAA 58.844 50.000 0.00 0.00 0.00 3.02
496 497 0.673333 CCATAGCACAACACCGCAGA 60.673 55.000 0.00 0.00 0.00 4.26
497 498 1.647545 CCCATAGCACAACACCGCAG 61.648 60.000 0.00 0.00 0.00 5.18
498 499 1.673993 CCCATAGCACAACACCGCA 60.674 57.895 0.00 0.00 0.00 5.69
499 500 1.369091 CTCCCATAGCACAACACCGC 61.369 60.000 0.00 0.00 0.00 5.68
500 501 0.249120 TCTCCCATAGCACAACACCG 59.751 55.000 0.00 0.00 0.00 4.94
501 502 2.359900 CTTCTCCCATAGCACAACACC 58.640 52.381 0.00 0.00 0.00 4.16
502 503 1.740025 GCTTCTCCCATAGCACAACAC 59.260 52.381 0.00 0.00 37.35 3.32
503 504 1.350684 TGCTTCTCCCATAGCACAACA 59.649 47.619 0.00 0.00 42.12 3.33
504 505 2.012673 CTGCTTCTCCCATAGCACAAC 58.987 52.381 0.00 0.00 42.12 3.32
505 506 1.679944 GCTGCTTCTCCCATAGCACAA 60.680 52.381 0.00 0.00 42.12 3.33
506 507 0.107508 GCTGCTTCTCCCATAGCACA 60.108 55.000 0.00 0.00 42.12 4.57
507 508 0.179936 AGCTGCTTCTCCCATAGCAC 59.820 55.000 0.00 0.00 42.12 4.40
508 509 0.179702 CAGCTGCTTCTCCCATAGCA 59.820 55.000 0.00 0.00 44.58 3.49
509 510 1.165284 GCAGCTGCTTCTCCCATAGC 61.165 60.000 31.33 0.00 38.21 2.97
510 511 0.879400 CGCAGCTGCTTCTCCCATAG 60.879 60.000 34.22 12.51 39.32 2.23
511 512 1.144716 CGCAGCTGCTTCTCCCATA 59.855 57.895 34.22 0.00 39.32 2.74
512 513 2.124819 CGCAGCTGCTTCTCCCAT 60.125 61.111 34.22 0.00 39.32 4.00
513 514 4.399395 CCGCAGCTGCTTCTCCCA 62.399 66.667 34.22 0.00 39.32 4.37
514 515 4.087892 TCCGCAGCTGCTTCTCCC 62.088 66.667 34.22 6.15 39.32 4.30
515 516 2.511145 CTCCGCAGCTGCTTCTCC 60.511 66.667 34.22 6.92 39.32 3.71
516 517 2.511145 CCTCCGCAGCTGCTTCTC 60.511 66.667 34.22 7.69 39.32 2.87
517 518 3.308014 GACCTCCGCAGCTGCTTCT 62.308 63.158 34.22 13.40 39.32 2.85
518 519 2.817396 GACCTCCGCAGCTGCTTC 60.817 66.667 34.22 18.62 39.32 3.86
519 520 4.400961 GGACCTCCGCAGCTGCTT 62.401 66.667 34.22 14.45 39.32 3.91
529 530 1.941999 CTTGGTACGTCGGGACCTCC 61.942 65.000 16.72 2.55 36.62 4.30
530 531 1.246737 ACTTGGTACGTCGGGACCTC 61.247 60.000 16.72 0.00 36.62 3.85
531 532 1.228675 ACTTGGTACGTCGGGACCT 60.229 57.895 16.72 0.00 36.62 3.85
532 533 1.080298 CACTTGGTACGTCGGGACC 60.080 63.158 10.76 10.76 36.17 4.46
533 534 1.735559 GCACTTGGTACGTCGGGAC 60.736 63.158 0.00 0.00 0.00 4.46
534 535 0.608856 TAGCACTTGGTACGTCGGGA 60.609 55.000 0.00 0.00 0.00 5.14
535 536 0.244450 TTAGCACTTGGTACGTCGGG 59.756 55.000 0.00 0.00 0.00 5.14
536 537 1.343506 GTTAGCACTTGGTACGTCGG 58.656 55.000 0.00 0.00 0.00 4.79
537 538 0.979811 CGTTAGCACTTGGTACGTCG 59.020 55.000 0.00 0.00 0.00 5.12
538 539 1.981533 GACGTTAGCACTTGGTACGTC 59.018 52.381 18.54 18.54 40.84 4.34
539 540 1.336240 GGACGTTAGCACTTGGTACGT 60.336 52.381 12.57 12.57 37.92 3.57
540 541 1.343506 GGACGTTAGCACTTGGTACG 58.656 55.000 0.00 0.00 0.00 3.67
541 542 1.673923 GGGGACGTTAGCACTTGGTAC 60.674 57.143 0.00 0.00 0.00 3.34
542 543 0.609662 GGGGACGTTAGCACTTGGTA 59.390 55.000 0.00 0.00 0.00 3.25
543 544 1.373812 GGGGACGTTAGCACTTGGT 59.626 57.895 0.00 0.00 0.00 3.67
544 545 4.296265 GGGGACGTTAGCACTTGG 57.704 61.111 0.00 0.00 0.00 3.61
562 563 3.441011 ATCCAATCCCGTCGTCGCC 62.441 63.158 0.00 0.00 35.54 5.54
563 564 1.949631 GATCCAATCCCGTCGTCGC 60.950 63.158 0.00 0.00 35.54 5.19
564 565 1.299926 GGATCCAATCCCGTCGTCG 60.300 63.158 6.95 0.00 43.88 5.12
565 566 4.752514 GGATCCAATCCCGTCGTC 57.247 61.111 6.95 0.00 43.88 4.20
572 573 0.179018 CTCCCAACCGGATCCAATCC 60.179 60.000 9.46 0.00 46.22 3.01
573 574 0.837272 TCTCCCAACCGGATCCAATC 59.163 55.000 9.46 0.00 41.00 2.67
574 575 1.143684 CATCTCCCAACCGGATCCAAT 59.856 52.381 9.46 0.00 41.00 3.16
575 576 0.546122 CATCTCCCAACCGGATCCAA 59.454 55.000 9.46 0.00 41.00 3.53
576 577 0.326143 TCATCTCCCAACCGGATCCA 60.326 55.000 9.46 0.00 41.00 3.41
577 578 1.059913 ATCATCTCCCAACCGGATCC 58.940 55.000 9.46 0.00 41.00 3.36
578 579 2.880890 CAAATCATCTCCCAACCGGATC 59.119 50.000 9.46 0.00 41.00 3.36
579 580 2.423373 CCAAATCATCTCCCAACCGGAT 60.423 50.000 9.46 0.00 41.00 4.18
580 581 1.064758 CCAAATCATCTCCCAACCGGA 60.065 52.381 9.46 0.00 38.83 5.14
581 582 1.064758 TCCAAATCATCTCCCAACCGG 60.065 52.381 0.00 0.00 0.00 5.28
582 583 2.017049 GTCCAAATCATCTCCCAACCG 58.983 52.381 0.00 0.00 0.00 4.44
583 584 2.379005 GGTCCAAATCATCTCCCAACC 58.621 52.381 0.00 0.00 0.00 3.77
584 585 2.379005 GGGTCCAAATCATCTCCCAAC 58.621 52.381 0.00 0.00 35.43 3.77
585 586 1.064758 CGGGTCCAAATCATCTCCCAA 60.065 52.381 0.00 0.00 35.08 4.12
586 587 0.546122 CGGGTCCAAATCATCTCCCA 59.454 55.000 0.00 0.00 35.08 4.37
587 588 0.837272 TCGGGTCCAAATCATCTCCC 59.163 55.000 0.00 0.00 0.00 4.30
588 589 2.880890 CAATCGGGTCCAAATCATCTCC 59.119 50.000 0.00 0.00 0.00 3.71
589 590 2.291741 GCAATCGGGTCCAAATCATCTC 59.708 50.000 0.00 0.00 0.00 2.75
590 591 2.301346 GCAATCGGGTCCAAATCATCT 58.699 47.619 0.00 0.00 0.00 2.90
591 592 2.023673 TGCAATCGGGTCCAAATCATC 58.976 47.619 0.00 0.00 0.00 2.92
592 593 2.142356 TGCAATCGGGTCCAAATCAT 57.858 45.000 0.00 0.00 0.00 2.45
593 594 2.142356 ATGCAATCGGGTCCAAATCA 57.858 45.000 0.00 0.00 0.00 2.57
594 595 3.131046 AGAAATGCAATCGGGTCCAAATC 59.869 43.478 0.00 0.00 0.00 2.17
595 596 3.099141 AGAAATGCAATCGGGTCCAAAT 58.901 40.909 0.00 0.00 0.00 2.32
596 597 2.524306 AGAAATGCAATCGGGTCCAAA 58.476 42.857 0.00 0.00 0.00 3.28
597 598 2.214376 AGAAATGCAATCGGGTCCAA 57.786 45.000 0.00 0.00 0.00 3.53
598 599 1.818060 CAAGAAATGCAATCGGGTCCA 59.182 47.619 0.00 0.00 0.00 4.02
599 600 1.818674 ACAAGAAATGCAATCGGGTCC 59.181 47.619 0.00 0.00 0.00 4.46
600 601 3.575965 AACAAGAAATGCAATCGGGTC 57.424 42.857 0.00 0.00 0.00 4.46
601 602 3.306019 GGAAACAAGAAATGCAATCGGGT 60.306 43.478 0.00 0.00 0.00 5.28
602 603 3.056607 AGGAAACAAGAAATGCAATCGGG 60.057 43.478 0.00 0.00 0.00 5.14
603 604 3.922240 CAGGAAACAAGAAATGCAATCGG 59.078 43.478 0.00 0.00 0.00 4.18
604 605 4.549458 ACAGGAAACAAGAAATGCAATCG 58.451 39.130 0.00 0.00 0.00 3.34
605 606 5.117592 CGAACAGGAAACAAGAAATGCAATC 59.882 40.000 0.00 0.00 0.00 2.67
606 607 4.984161 CGAACAGGAAACAAGAAATGCAAT 59.016 37.500 0.00 0.00 0.00 3.56
607 608 4.358851 CGAACAGGAAACAAGAAATGCAA 58.641 39.130 0.00 0.00 0.00 4.08
608 609 3.243367 CCGAACAGGAAACAAGAAATGCA 60.243 43.478 0.00 0.00 45.00 3.96
609 610 3.308530 CCGAACAGGAAACAAGAAATGC 58.691 45.455 0.00 0.00 45.00 3.56
610 611 3.305335 CCCCGAACAGGAAACAAGAAATG 60.305 47.826 0.00 0.00 45.00 2.32
611 612 2.890945 CCCCGAACAGGAAACAAGAAAT 59.109 45.455 0.00 0.00 45.00 2.17
612 613 2.303175 CCCCGAACAGGAAACAAGAAA 58.697 47.619 0.00 0.00 45.00 2.52
613 614 1.213430 ACCCCGAACAGGAAACAAGAA 59.787 47.619 0.00 0.00 45.00 2.52
614 615 0.841289 ACCCCGAACAGGAAACAAGA 59.159 50.000 0.00 0.00 45.00 3.02
615 616 1.235724 GACCCCGAACAGGAAACAAG 58.764 55.000 0.00 0.00 45.00 3.16
616 617 0.179012 GGACCCCGAACAGGAAACAA 60.179 55.000 0.00 0.00 45.00 2.83
617 618 1.057851 AGGACCCCGAACAGGAAACA 61.058 55.000 0.00 0.00 45.00 2.83
618 619 0.321387 GAGGACCCCGAACAGGAAAC 60.321 60.000 0.00 0.00 45.00 2.78
619 620 1.486145 GGAGGACCCCGAACAGGAAA 61.486 60.000 0.00 0.00 45.00 3.13
620 621 1.916777 GGAGGACCCCGAACAGGAA 60.917 63.158 0.00 0.00 45.00 3.36
621 622 2.284405 GGAGGACCCCGAACAGGA 60.284 66.667 0.00 0.00 45.00 3.86
622 623 1.995626 ATGGAGGACCCCGAACAGG 60.996 63.158 0.00 0.00 40.63 4.00
623 624 1.221840 CATGGAGGACCCCGAACAG 59.778 63.158 0.00 0.00 34.81 3.16
624 625 2.966732 GCATGGAGGACCCCGAACA 61.967 63.158 0.00 0.00 34.81 3.18
625 626 2.124695 GCATGGAGGACCCCGAAC 60.125 66.667 0.00 0.00 34.81 3.95
626 627 1.784301 TTTGCATGGAGGACCCCGAA 61.784 55.000 0.00 0.00 34.81 4.30
627 628 1.784301 TTTTGCATGGAGGACCCCGA 61.784 55.000 0.00 0.00 34.81 5.14
628 629 0.897863 TTTTTGCATGGAGGACCCCG 60.898 55.000 0.00 0.00 34.81 5.73
629 630 3.065462 TTTTTGCATGGAGGACCCC 57.935 52.632 0.00 0.00 34.81 4.95
644 645 4.513406 TTACAGACCAGTCCCTGTTTTT 57.487 40.909 0.00 0.00 42.86 1.94
645 646 4.724279 ATTACAGACCAGTCCCTGTTTT 57.276 40.909 0.00 0.00 42.86 2.43
646 647 4.724279 AATTACAGACCAGTCCCTGTTT 57.276 40.909 0.00 0.00 42.86 2.83
647 648 4.724279 AAATTACAGACCAGTCCCTGTT 57.276 40.909 0.00 0.00 42.86 3.16
648 649 4.351111 AGAAAATTACAGACCAGTCCCTGT 59.649 41.667 0.00 0.00 44.81 4.00
649 650 4.911390 AGAAAATTACAGACCAGTCCCTG 58.089 43.478 0.00 0.00 36.53 4.45
650 651 5.584551 AAGAAAATTACAGACCAGTCCCT 57.415 39.130 0.00 0.00 0.00 4.20
651 652 5.183331 GGAAAGAAAATTACAGACCAGTCCC 59.817 44.000 0.00 0.00 0.00 4.46
652 653 6.004574 AGGAAAGAAAATTACAGACCAGTCC 58.995 40.000 0.00 0.00 0.00 3.85
653 654 7.511959 AAGGAAAGAAAATTACAGACCAGTC 57.488 36.000 0.00 0.00 0.00 3.51
654 655 7.342026 ACAAAGGAAAGAAAATTACAGACCAGT 59.658 33.333 0.00 0.00 0.00 4.00
655 656 7.649306 CACAAAGGAAAGAAAATTACAGACCAG 59.351 37.037 0.00 0.00 0.00 4.00
656 657 7.123547 ACACAAAGGAAAGAAAATTACAGACCA 59.876 33.333 0.00 0.00 0.00 4.02
657 658 7.435192 CACACAAAGGAAAGAAAATTACAGACC 59.565 37.037 0.00 0.00 0.00 3.85
658 659 7.973944 ACACACAAAGGAAAGAAAATTACAGAC 59.026 33.333 0.00 0.00 0.00 3.51
659 660 8.062065 ACACACAAAGGAAAGAAAATTACAGA 57.938 30.769 0.00 0.00 0.00 3.41
660 661 7.435192 GGACACACAAAGGAAAGAAAATTACAG 59.565 37.037 0.00 0.00 0.00 2.74
661 662 7.123547 AGGACACACAAAGGAAAGAAAATTACA 59.876 33.333 0.00 0.00 0.00 2.41
662 663 7.435192 CAGGACACACAAAGGAAAGAAAATTAC 59.565 37.037 0.00 0.00 0.00 1.89
663 664 7.123547 ACAGGACACACAAAGGAAAGAAAATTA 59.876 33.333 0.00 0.00 0.00 1.40
664 665 6.070824 ACAGGACACACAAAGGAAAGAAAATT 60.071 34.615 0.00 0.00 0.00 1.82
665 666 5.422012 ACAGGACACACAAAGGAAAGAAAAT 59.578 36.000 0.00 0.00 0.00 1.82
666 667 4.770010 ACAGGACACACAAAGGAAAGAAAA 59.230 37.500 0.00 0.00 0.00 2.29
667 668 4.340617 ACAGGACACACAAAGGAAAGAAA 58.659 39.130 0.00 0.00 0.00 2.52
668 669 3.963129 ACAGGACACACAAAGGAAAGAA 58.037 40.909 0.00 0.00 0.00 2.52
669 670 3.644966 ACAGGACACACAAAGGAAAGA 57.355 42.857 0.00 0.00 0.00 2.52
670 671 3.443681 ACAACAGGACACACAAAGGAAAG 59.556 43.478 0.00 0.00 0.00 2.62
671 672 3.426615 ACAACAGGACACACAAAGGAAA 58.573 40.909 0.00 0.00 0.00 3.13
672 673 3.080300 ACAACAGGACACACAAAGGAA 57.920 42.857 0.00 0.00 0.00 3.36
673 674 2.799126 ACAACAGGACACACAAAGGA 57.201 45.000 0.00 0.00 0.00 3.36
674 675 4.398044 AGTTTACAACAGGACACACAAAGG 59.602 41.667 0.00 0.00 0.00 3.11
675 676 5.560966 AGTTTACAACAGGACACACAAAG 57.439 39.130 0.00 0.00 0.00 2.77
676 677 5.063691 CGTAGTTTACAACAGGACACACAAA 59.936 40.000 0.00 0.00 0.00 2.83
677 678 4.567558 CGTAGTTTACAACAGGACACACAA 59.432 41.667 0.00 0.00 0.00 3.33
678 679 4.114073 CGTAGTTTACAACAGGACACACA 58.886 43.478 0.00 0.00 0.00 3.72
679 680 3.492011 CCGTAGTTTACAACAGGACACAC 59.508 47.826 0.00 0.00 0.00 3.82
680 681 3.132646 ACCGTAGTTTACAACAGGACACA 59.867 43.478 3.76 0.00 0.00 3.72
681 682 3.492011 CACCGTAGTTTACAACAGGACAC 59.508 47.826 3.76 0.00 0.00 3.67
682 683 3.132646 ACACCGTAGTTTACAACAGGACA 59.867 43.478 3.76 0.00 0.00 4.02
683 684 3.492011 CACACCGTAGTTTACAACAGGAC 59.508 47.826 3.76 0.00 0.00 3.85
684 685 3.719924 CACACCGTAGTTTACAACAGGA 58.280 45.455 3.76 0.00 0.00 3.86
685 686 2.222445 GCACACCGTAGTTTACAACAGG 59.778 50.000 0.00 0.00 0.00 4.00
686 687 3.128349 AGCACACCGTAGTTTACAACAG 58.872 45.455 0.00 0.00 0.00 3.16
687 688 3.182341 AGCACACCGTAGTTTACAACA 57.818 42.857 0.00 0.00 0.00 3.33
688 689 4.149396 CACTAGCACACCGTAGTTTACAAC 59.851 45.833 0.00 0.00 0.00 3.32
689 690 4.300803 CACTAGCACACCGTAGTTTACAA 58.699 43.478 0.00 0.00 0.00 2.41
690 691 3.858129 GCACTAGCACACCGTAGTTTACA 60.858 47.826 0.00 0.00 41.58 2.41
691 692 2.665052 GCACTAGCACACCGTAGTTTAC 59.335 50.000 0.00 0.00 41.58 2.01
692 693 2.559668 AGCACTAGCACACCGTAGTTTA 59.440 45.455 0.00 0.00 45.49 2.01
693 694 1.343465 AGCACTAGCACACCGTAGTTT 59.657 47.619 0.00 0.00 45.49 2.66
694 695 0.966920 AGCACTAGCACACCGTAGTT 59.033 50.000 0.00 0.00 45.49 2.24
695 696 1.471684 GTAGCACTAGCACACCGTAGT 59.528 52.381 0.00 0.00 45.49 2.73
696 697 1.202268 GGTAGCACTAGCACACCGTAG 60.202 57.143 2.08 0.00 45.49 3.51
697 698 0.813184 GGTAGCACTAGCACACCGTA 59.187 55.000 2.08 0.00 45.49 4.02
698 699 1.590147 GGTAGCACTAGCACACCGT 59.410 57.895 2.08 0.00 45.49 4.83
699 700 4.496670 GGTAGCACTAGCACACCG 57.503 61.111 2.08 0.00 45.49 4.94
700 701 0.460311 ATCGGTAGCACTAGCACACC 59.540 55.000 7.57 0.00 45.49 4.16
701 702 1.405821 AGATCGGTAGCACTAGCACAC 59.594 52.381 7.57 0.00 45.49 3.82
702 703 1.763968 AGATCGGTAGCACTAGCACA 58.236 50.000 7.57 0.00 45.49 4.57
703 704 3.366476 CCATAGATCGGTAGCACTAGCAC 60.366 52.174 7.57 0.00 45.49 4.40
704 705 2.820197 CCATAGATCGGTAGCACTAGCA 59.180 50.000 7.57 0.00 45.49 3.49
705 706 2.820787 ACCATAGATCGGTAGCACTAGC 59.179 50.000 0.00 0.00 42.56 3.42
706 707 6.570672 TTAACCATAGATCGGTAGCACTAG 57.429 41.667 0.00 0.00 34.99 2.57
707 708 6.571731 GCATTAACCATAGATCGGTAGCACTA 60.572 42.308 0.00 0.00 34.99 2.74
708 709 5.784177 CATTAACCATAGATCGGTAGCACT 58.216 41.667 0.00 0.00 34.99 4.40
709 710 4.389077 GCATTAACCATAGATCGGTAGCAC 59.611 45.833 0.00 0.00 34.99 4.40
710 711 4.039852 TGCATTAACCATAGATCGGTAGCA 59.960 41.667 0.00 0.00 34.99 3.49
711 712 4.566004 TGCATTAACCATAGATCGGTAGC 58.434 43.478 0.00 0.00 34.99 3.58
712 713 5.784177 ACTGCATTAACCATAGATCGGTAG 58.216 41.667 0.00 0.00 34.99 3.18
713 714 5.801531 ACTGCATTAACCATAGATCGGTA 57.198 39.130 0.00 0.00 34.99 4.02
714 715 4.689612 ACTGCATTAACCATAGATCGGT 57.310 40.909 0.00 0.00 38.85 4.69
715 716 5.760253 AGAAACTGCATTAACCATAGATCGG 59.240 40.000 0.00 0.00 0.00 4.18
716 717 6.293081 CCAGAAACTGCATTAACCATAGATCG 60.293 42.308 0.00 0.00 0.00 3.69
717 718 6.016777 CCCAGAAACTGCATTAACCATAGATC 60.017 42.308 0.00 0.00 0.00 2.75
718 719 5.829924 CCCAGAAACTGCATTAACCATAGAT 59.170 40.000 0.00 0.00 0.00 1.98
719 720 5.192927 CCCAGAAACTGCATTAACCATAGA 58.807 41.667 0.00 0.00 0.00 1.98
720 721 4.949856 ACCCAGAAACTGCATTAACCATAG 59.050 41.667 0.00 0.00 0.00 2.23
721 722 4.929479 ACCCAGAAACTGCATTAACCATA 58.071 39.130 0.00 0.00 0.00 2.74
722 723 3.763897 GACCCAGAAACTGCATTAACCAT 59.236 43.478 0.00 0.00 0.00 3.55
723 724 3.153919 GACCCAGAAACTGCATTAACCA 58.846 45.455 0.00 0.00 0.00 3.67
724 725 2.161609 CGACCCAGAAACTGCATTAACC 59.838 50.000 0.00 0.00 0.00 2.85
725 726 2.414161 GCGACCCAGAAACTGCATTAAC 60.414 50.000 0.00 0.00 0.00 2.01
726 727 1.810151 GCGACCCAGAAACTGCATTAA 59.190 47.619 0.00 0.00 0.00 1.40
727 728 1.448985 GCGACCCAGAAACTGCATTA 58.551 50.000 0.00 0.00 0.00 1.90
728 729 1.577328 CGCGACCCAGAAACTGCATT 61.577 55.000 0.00 0.00 0.00 3.56
729 730 2.034879 CGCGACCCAGAAACTGCAT 61.035 57.895 0.00 0.00 0.00 3.96
730 731 2.664851 CGCGACCCAGAAACTGCA 60.665 61.111 0.00 0.00 0.00 4.41
731 732 2.665185 ACGCGACCCAGAAACTGC 60.665 61.111 15.93 0.00 0.00 4.40
732 733 1.300620 TCACGCGACCCAGAAACTG 60.301 57.895 15.93 0.00 0.00 3.16
733 734 1.300697 GTCACGCGACCCAGAAACT 60.301 57.895 15.93 0.00 36.02 2.66
734 735 3.241177 GTCACGCGACCCAGAAAC 58.759 61.111 15.93 0.00 36.02 2.78
742 743 0.165944 CAAAAGATGGGTCACGCGAC 59.834 55.000 15.93 0.00 41.80 5.19
743 744 0.250124 ACAAAAGATGGGTCACGCGA 60.250 50.000 15.93 0.00 0.00 5.87
744 745 0.591170 AACAAAAGATGGGTCACGCG 59.409 50.000 3.53 3.53 0.00 6.01
745 746 1.606668 TGAACAAAAGATGGGTCACGC 59.393 47.619 0.00 0.00 0.00 5.34
746 747 3.980646 TTGAACAAAAGATGGGTCACG 57.019 42.857 0.00 0.00 29.80 4.35
768 769 3.118665 TCTGCTCTTGGCTTTTGCTTTTT 60.119 39.130 0.00 0.00 46.54 1.94
769 770 2.431782 TCTGCTCTTGGCTTTTGCTTTT 59.568 40.909 0.00 0.00 46.54 2.27
808 809 3.310501 CGTGGTTACGTTTTCTCCAAGTT 59.689 43.478 0.00 0.00 44.99 2.66
809 810 2.867975 CGTGGTTACGTTTTCTCCAAGT 59.132 45.455 0.00 0.00 44.99 3.16
845 846 7.145985 GTGAACTCCTCTTATAATACGCATCA 58.854 38.462 0.00 0.00 0.00 3.07
894 895 1.165270 GTTGGTCAAGATGTTCCGGG 58.835 55.000 0.00 0.00 0.00 5.73
1008 1016 0.466922 GATCGGAGGGGGACTTACGA 60.467 60.000 0.00 0.00 41.08 3.43
1070 1079 7.764331 TCATCACAATTCACATCGATCAATTT 58.236 30.769 0.00 0.00 0.00 1.82
1071 1080 7.324354 TCATCACAATTCACATCGATCAATT 57.676 32.000 0.00 0.00 0.00 2.32
1072 1081 6.930667 TCATCACAATTCACATCGATCAAT 57.069 33.333 0.00 0.00 0.00 2.57
1081 1090 4.281435 ACCAAAGCATCATCACAATTCACA 59.719 37.500 0.00 0.00 0.00 3.58
1082 1091 4.813027 ACCAAAGCATCATCACAATTCAC 58.187 39.130 0.00 0.00 0.00 3.18
1083 1092 5.471556 AACCAAAGCATCATCACAATTCA 57.528 34.783 0.00 0.00 0.00 2.57
1084 1093 5.121142 CCAAACCAAAGCATCATCACAATTC 59.879 40.000 0.00 0.00 0.00 2.17
1085 1094 4.998672 CCAAACCAAAGCATCATCACAATT 59.001 37.500 0.00 0.00 0.00 2.32
1086 1095 4.040706 ACCAAACCAAAGCATCATCACAAT 59.959 37.500 0.00 0.00 0.00 2.71
1087 1096 3.387374 ACCAAACCAAAGCATCATCACAA 59.613 39.130 0.00 0.00 0.00 3.33
1130 1144 3.070018 CCTCGCATGAGTTCTCAAACTT 58.930 45.455 6.60 0.00 45.80 2.66
1144 1158 3.310860 GAACACCCCGACCTCGCAT 62.311 63.158 0.00 0.00 38.18 4.73
1206 1220 1.482177 CCAACCTGGTGAAATTCCCCA 60.482 52.381 0.00 0.00 31.35 4.96
1227 1241 1.329292 GACAGATCGAGTCGAGGACAG 59.671 57.143 21.36 13.16 39.91 3.51
1241 1255 3.123804 GTCGCGATTAACCATGACAGAT 58.876 45.455 14.06 0.00 0.00 2.90
1266 1280 1.204113 AGAAGAAGCCACCAGGGGAG 61.204 60.000 0.00 0.00 37.04 4.30
1267 1281 1.151810 AGAAGAAGCCACCAGGGGA 60.152 57.895 0.00 0.00 37.04 4.81
1268 1282 1.204113 AGAGAAGAAGCCACCAGGGG 61.204 60.000 0.00 0.00 37.04 4.79
1269 1283 0.695347 AAGAGAAGAAGCCACCAGGG 59.305 55.000 0.00 0.00 40.85 4.45
1270 1284 1.627834 AGAAGAGAAGAAGCCACCAGG 59.372 52.381 0.00 0.00 38.23 4.45
1271 1285 4.543590 TTAGAAGAGAAGAAGCCACCAG 57.456 45.455 0.00 0.00 0.00 4.00
1393 1418 1.610379 GGCCCTTCTTGTTGCCCAT 60.610 57.895 0.00 0.00 37.94 4.00
1413 1438 2.506231 TGGTGGTGTGTGGTAGAAGAAA 59.494 45.455 0.00 0.00 0.00 2.52
1414 1439 2.120312 TGGTGGTGTGTGGTAGAAGAA 58.880 47.619 0.00 0.00 0.00 2.52
1700 1728 2.434843 CCCTGCGATGGTCTGCCTA 61.435 63.158 0.00 0.00 35.27 3.93
1794 1822 0.909623 TTGAACCCTAGGTAGCTGGC 59.090 55.000 8.29 0.00 33.12 4.85
1796 1824 2.188817 AGGTTGAACCCTAGGTAGCTG 58.811 52.381 11.41 0.00 39.75 4.24
1806 1834 1.946283 GCAGTGAGCTAGGTTGAACCC 60.946 57.143 11.41 0.00 38.70 4.11
1818 1846 4.023365 AGTTTCAGAAATCAAGCAGTGAGC 60.023 41.667 0.00 0.00 40.43 4.26
2149 2739 4.946157 CACAGATACAGCAAGGGAGAAAAT 59.054 41.667 0.00 0.00 0.00 1.82
2150 2740 4.202461 ACACAGATACAGCAAGGGAGAAAA 60.202 41.667 0.00 0.00 0.00 2.29
2151 2741 3.327757 ACACAGATACAGCAAGGGAGAAA 59.672 43.478 0.00 0.00 0.00 2.52
2152 2742 2.906389 ACACAGATACAGCAAGGGAGAA 59.094 45.455 0.00 0.00 0.00 2.87
2153 2743 2.540383 ACACAGATACAGCAAGGGAGA 58.460 47.619 0.00 0.00 0.00 3.71
2154 2744 3.340814 AACACAGATACAGCAAGGGAG 57.659 47.619 0.00 0.00 0.00 4.30
2188 2778 7.600065 TCACGAGCTTAAAAGTACTACTTCAT 58.400 34.615 0.00 0.00 37.47 2.57
2237 2915 3.181474 GGTCTTCAGAGATAAACCCTCCG 60.181 52.174 0.00 0.00 33.70 4.63
2449 3139 9.113876 CATTAGTCTGAACCAACGTAAAAATTC 57.886 33.333 0.00 0.00 0.00 2.17
2450 3140 8.626526 ACATTAGTCTGAACCAACGTAAAAATT 58.373 29.630 0.00 0.00 0.00 1.82
2451 3141 8.161699 ACATTAGTCTGAACCAACGTAAAAAT 57.838 30.769 0.00 0.00 0.00 1.82
2452 3142 7.280428 TGACATTAGTCTGAACCAACGTAAAAA 59.720 33.333 0.00 0.00 45.20 1.94
2453 3143 6.762187 TGACATTAGTCTGAACCAACGTAAAA 59.238 34.615 0.00 0.00 45.20 1.52
2454 3144 6.282167 TGACATTAGTCTGAACCAACGTAAA 58.718 36.000 0.00 0.00 45.20 2.01
2455 3145 5.845103 TGACATTAGTCTGAACCAACGTAA 58.155 37.500 0.00 0.00 45.20 3.18
2456 3146 5.456548 TGACATTAGTCTGAACCAACGTA 57.543 39.130 0.00 0.00 45.20 3.57
2457 3147 4.330944 TGACATTAGTCTGAACCAACGT 57.669 40.909 0.00 0.00 45.20 3.99
2458 3148 5.862924 AATGACATTAGTCTGAACCAACG 57.137 39.130 0.00 0.00 45.20 4.10
2459 3149 7.595130 GGAAAAATGACATTAGTCTGAACCAAC 59.405 37.037 0.00 0.00 45.20 3.77
2460 3150 7.505585 AGGAAAAATGACATTAGTCTGAACCAA 59.494 33.333 0.00 0.00 45.20 3.67
2461 3151 7.004086 AGGAAAAATGACATTAGTCTGAACCA 58.996 34.615 0.00 0.00 45.20 3.67
2462 3152 7.454260 AGGAAAAATGACATTAGTCTGAACC 57.546 36.000 0.00 0.00 45.20 3.62
2463 3153 9.185192 CAAAGGAAAAATGACATTAGTCTGAAC 57.815 33.333 0.00 0.00 45.20 3.18
2464 3154 9.130661 TCAAAGGAAAAATGACATTAGTCTGAA 57.869 29.630 0.00 0.00 45.20 3.02
2465 3155 8.690203 TCAAAGGAAAAATGACATTAGTCTGA 57.310 30.769 0.00 0.50 45.20 3.27
2466 3156 9.748708 TTTCAAAGGAAAAATGACATTAGTCTG 57.251 29.630 0.00 0.00 41.36 3.51
2474 3164 9.709495 CCTTCATATTTCAAAGGAAAAATGACA 57.291 29.630 0.00 0.00 45.52 3.58
2475 3165 9.927668 TCCTTCATATTTCAAAGGAAAAATGAC 57.072 29.630 0.69 0.00 45.52 3.06
2544 3292 5.912360 AAATTTTCTTTGCAGCACTAAGC 57.088 34.783 0.00 0.00 46.19 3.09
2564 3313 6.933514 AAGGATAGGAATTTTGCAGGAAAA 57.066 33.333 1.88 1.88 37.93 2.29
2565 3314 6.933514 AAAGGATAGGAATTTTGCAGGAAA 57.066 33.333 0.00 0.00 0.00 3.13
2568 3317 7.645058 TTCTAAAGGATAGGAATTTTGCAGG 57.355 36.000 0.00 0.00 0.00 4.85
2609 3358 3.323691 AGGCCAATTTTACTTGGGTTCAC 59.676 43.478 5.01 0.00 44.89 3.18
2611 3360 5.731957 TTAGGCCAATTTTACTTGGGTTC 57.268 39.130 5.01 0.00 44.89 3.62
2624 3374 6.954102 ACCTATGAAGAAAACTTTAGGCCAAT 59.046 34.615 5.01 0.00 0.00 3.16
2653 3403 0.250901 ATCTGCAGCGTTCCTTTGGT 60.251 50.000 9.47 0.00 0.00 3.67
2665 3415 4.199432 AGTGGTCTTGTCTAATCTGCAG 57.801 45.455 7.63 7.63 0.00 4.41
2783 3536 0.250234 TTGAAGGACCGATGGCTGAG 59.750 55.000 0.00 0.00 0.00 3.35
2787 3540 3.253230 CAATTTTTGAAGGACCGATGGC 58.747 45.455 0.00 0.00 0.00 4.40
2793 3546 3.751479 ACCAGCAATTTTTGAAGGACC 57.249 42.857 5.70 0.00 32.54 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.