Multiple sequence alignment - TraesCS3A01G187100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G187100 chr3A 100.000 3724 0 0 1 3724 222044901 222041178 0.000000e+00 6878.0
1 TraesCS3A01G187100 chr3A 83.799 358 34 17 6 341 699470111 699469756 6.000000e-83 318.0
2 TraesCS3A01G187100 chr3A 85.981 214 23 5 3060 3269 86472589 86472379 4.840000e-54 222.0
3 TraesCS3A01G187100 chr3B 94.385 1977 75 10 1114 3058 257320406 257318434 0.000000e+00 3003.0
4 TraesCS3A01G187100 chr3B 85.145 828 62 13 1 791 417103109 417102306 0.000000e+00 791.0
5 TraesCS3A01G187100 chr3B 94.895 333 11 3 796 1123 257320766 257320435 1.980000e-142 516.0
6 TraesCS3A01G187100 chr3B 85.593 118 13 4 3544 3660 650546628 650546742 1.820000e-23 121.0
7 TraesCS3A01G187100 chr3B 85.106 94 13 1 3570 3662 659995248 659995341 1.100000e-15 95.3
8 TraesCS3A01G187100 chr3D 93.866 913 38 7 2151 3058 179233686 179232787 0.000000e+00 1360.0
9 TraesCS3A01G187100 chr3D 95.378 714 17 3 1469 2167 179234648 179233936 0.000000e+00 1122.0
10 TraesCS3A01G187100 chr3D 94.278 699 23 5 796 1478 179235739 179235042 0.000000e+00 1053.0
11 TraesCS3A01G187100 chr3D 87.366 839 45 16 1 791 55782483 55781658 0.000000e+00 905.0
12 TraesCS3A01G187100 chr3D 92.701 137 9 1 3344 3479 179232760 179232624 2.930000e-46 196.0
13 TraesCS3A01G187100 chr5D 96.040 303 12 0 1 303 294611423 294611121 9.290000e-136 494.0
14 TraesCS3A01G187100 chr5D 90.423 355 24 5 447 791 294610909 294610555 3.390000e-125 459.0
15 TraesCS3A01G187100 chr5D 95.423 284 13 0 1 284 494230525 494230242 1.580000e-123 453.0
16 TraesCS3A01G187100 chr5D 89.607 356 26 2 447 791 494229841 494229486 3.410000e-120 442.0
17 TraesCS3A01G187100 chr5D 80.332 422 39 27 6 408 231568076 231568472 2.830000e-71 279.0
18 TraesCS3A01G187100 chr5D 89.674 184 17 2 3055 3237 163793602 163793420 2.240000e-57 233.0
19 TraesCS3A01G187100 chr1D 95.738 305 13 0 1 305 442677229 442676925 3.340000e-135 492.0
20 TraesCS3A01G187100 chr1D 89.326 356 27 2 447 791 442676798 442676443 1.590000e-118 436.0
21 TraesCS3A01G187100 chr1D 97.619 42 1 0 364 405 442676918 442676877 5.160000e-09 73.1
22 TraesCS3A01G187100 chr4A 88.116 345 40 1 447 791 645761116 645761459 3.460000e-110 409.0
23 TraesCS3A01G187100 chr4A 87.536 345 42 1 447 791 645727920 645728263 7.490000e-107 398.0
24 TraesCS3A01G187100 chr4A 91.473 258 21 1 1 258 645711849 645712105 1.650000e-93 353.0
25 TraesCS3A01G187100 chr4A 100.000 35 0 0 371 405 645712407 645712441 8.630000e-07 65.8
26 TraesCS3A01G187100 chr1A 83.716 436 37 16 1 405 536850297 536849865 7.550000e-102 381.0
27 TraesCS3A01G187100 chr1A 81.733 427 44 16 1 408 228090409 228089998 3.590000e-85 326.0
28 TraesCS3A01G187100 chr1A 87.442 215 20 6 3059 3269 481761681 481761470 1.340000e-59 241.0
29 TraesCS3A01G187100 chr4B 82.838 437 43 20 1 408 559124343 559123910 2.730000e-96 363.0
30 TraesCS3A01G187100 chr4B 81.019 216 25 6 1 214 634207209 634207410 1.380000e-34 158.0
31 TraesCS3A01G187100 chr6A 84.431 334 30 13 6 320 531066450 531066780 3.610000e-80 309.0
32 TraesCS3A01G187100 chr6A 88.060 201 18 3 3060 3257 33219638 33219835 2.240000e-57 233.0
33 TraesCS3A01G187100 chr7D 79.858 422 43 27 6 408 595091268 595091666 1.700000e-68 270.0
34 TraesCS3A01G187100 chr7D 88.785 214 21 3 3057 3268 397379004 397378792 3.690000e-65 259.0
35 TraesCS3A01G187100 chr7A 87.963 216 21 4 3057 3270 625068138 625067926 2.220000e-62 250.0
36 TraesCS3A01G187100 chr7A 94.118 51 3 0 3218 3268 250210815 250210865 1.110000e-10 78.7
37 TraesCS3A01G187100 chr1B 87.560 209 22 2 3062 3268 499895384 499895178 4.810000e-59 239.0
38 TraesCS3A01G187100 chr4D 86.486 222 19 3 3059 3269 5664167 5664388 2.240000e-57 233.0
39 TraesCS3A01G187100 chr5A 86.341 205 26 2 3066 3269 655793848 655793645 4.840000e-54 222.0
40 TraesCS3A01G187100 chr5A 85.950 121 14 3 3543 3662 321907509 321907627 3.900000e-25 126.0
41 TraesCS3A01G187100 chr7B 84.211 190 20 3 3544 3724 586055460 586055272 3.820000e-40 176.0
42 TraesCS3A01G187100 chr7B 84.298 121 13 6 3543 3662 595255764 595255879 3.040000e-21 113.0
43 TraesCS3A01G187100 chr2D 88.710 124 12 2 3543 3665 127944333 127944211 2.320000e-32 150.0
44 TraesCS3A01G187100 chr6D 78.125 192 27 8 3543 3724 460293617 460293803 1.410000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G187100 chr3A 222041178 222044901 3723 True 6878.00 6878 100.000000 1 3724 1 chr3A.!!$R2 3723
1 TraesCS3A01G187100 chr3B 257318434 257320766 2332 True 1759.50 3003 94.640000 796 3058 2 chr3B.!!$R2 2262
2 TraesCS3A01G187100 chr3B 417102306 417103109 803 True 791.00 791 85.145000 1 791 1 chr3B.!!$R1 790
3 TraesCS3A01G187100 chr3D 179232624 179235739 3115 True 932.75 1360 94.055750 796 3479 4 chr3D.!!$R2 2683
4 TraesCS3A01G187100 chr3D 55781658 55782483 825 True 905.00 905 87.366000 1 791 1 chr3D.!!$R1 790
5 TraesCS3A01G187100 chr5D 294610555 294611423 868 True 476.50 494 93.231500 1 791 2 chr5D.!!$R2 790
6 TraesCS3A01G187100 chr5D 494229486 494230525 1039 True 447.50 453 92.515000 1 791 2 chr5D.!!$R3 790
7 TraesCS3A01G187100 chr1D 442676443 442677229 786 True 333.70 492 94.227667 1 791 3 chr1D.!!$R1 790
8 TraesCS3A01G187100 chr4A 645711849 645712441 592 False 209.40 353 95.736500 1 405 2 chr4A.!!$F3 404

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
728 979 0.107993 CATGTGAGGTCGCTGTCCAT 60.108 55.000 0.0 0.0 0.00 3.41 F
860 1111 0.176910 GCCTCCAACTGAGCTACCTC 59.823 60.000 0.0 0.0 39.98 3.85 F
1773 2494 1.002134 CACTCGCCCCCAACAATCT 60.002 57.895 0.0 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2372 3376 0.464036 AAGGATCGCGCTATTGGTCA 59.536 50.0 5.56 0.0 0.00 4.02 R
2672 3683 2.497675 GGACTTCACTATGCTGAGGTCA 59.502 50.0 14.96 0.0 44.95 4.02 R
3294 4313 0.033504 TCGTCTCAAGGCAGTGAACC 59.966 55.0 0.00 0.0 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 5.779529 ACTGCACAGACATCAAAAATCTT 57.220 34.783 4.31 0.00 0.00 2.40
73 74 9.696572 AATATCCGGCAGATTAGACTATAGTTA 57.303 33.333 6.88 0.00 36.33 2.24
114 115 2.755952 TCTACTCCAGCTGCCATAGA 57.244 50.000 8.66 11.15 0.00 1.98
152 154 8.632906 AATCAACATTGCAATTAAATTTCCCA 57.367 26.923 9.83 0.00 0.00 4.37
173 175 8.651589 TCCCATGTCCAGACTACTAAATATAG 57.348 38.462 0.00 0.00 35.14 1.31
179 181 9.132923 TGTCCAGACTACTAAATATAGGAACTG 57.867 37.037 0.00 0.00 41.52 3.16
281 283 2.254546 ACAAGTTCACGGCTGAATCA 57.745 45.000 0.00 0.00 38.69 2.57
289 291 1.857217 CACGGCTGAATCATCTCGAAG 59.143 52.381 0.00 0.00 0.00 3.79
290 292 1.751351 ACGGCTGAATCATCTCGAAGA 59.249 47.619 0.00 0.00 0.00 2.87
291 293 7.890347 TTCACGGCTGAATCATCTCGAAGAG 62.890 48.000 0.00 0.00 43.15 2.85
351 353 3.042682 AGAGAGAGAGATCACGGAGGTA 58.957 50.000 0.00 0.00 0.00 3.08
361 363 2.365105 CGGAGGTAGCTTGGGGGA 60.365 66.667 0.00 0.00 0.00 4.81
410 628 1.037493 TACTACCTGCATGTAGGCGG 58.963 55.000 27.80 21.63 42.04 6.13
438 656 1.080093 CGCGGCTAAGTGTGAGGAA 60.080 57.895 0.00 0.00 0.00 3.36
443 661 2.093973 CGGCTAAGTGTGAGGAATCACT 60.094 50.000 9.57 0.00 45.21 3.41
445 663 3.307059 GGCTAAGTGTGAGGAATCACTGT 60.307 47.826 9.57 0.00 42.95 3.55
452 692 1.421268 TGAGGAATCACTGTTGTGCCT 59.579 47.619 0.00 0.00 43.49 4.75
470 710 1.203287 CCTGTCGCAGAAGATGAGTCA 59.797 52.381 8.20 0.00 39.69 3.41
523 763 4.415150 CGGCTCATGGTGGCACCT 62.415 66.667 34.69 19.01 39.58 4.00
541 781 0.320421 CTTGGAGGGAAAGACGCGAA 60.320 55.000 15.93 0.00 36.53 4.70
560 800 4.431131 CCTGCTGGGGTGGCGATT 62.431 66.667 0.71 0.00 0.00 3.34
574 814 3.394588 GATTGGCAATCGCGACGA 58.605 55.556 23.17 0.00 41.13 4.20
586 826 1.515519 GCGACGACGAGTTGGCATA 60.516 57.895 12.29 0.00 42.66 3.14
591 831 1.269166 CGACGAGTTGGCATAGTCAC 58.731 55.000 10.93 0.00 32.57 3.67
710 961 1.000359 TGGAGAGATGGACCGAGCA 60.000 57.895 0.00 0.00 0.00 4.26
727 978 1.293179 CATGTGAGGTCGCTGTCCA 59.707 57.895 0.00 0.00 0.00 4.02
728 979 0.107993 CATGTGAGGTCGCTGTCCAT 60.108 55.000 0.00 0.00 0.00 3.41
732 983 0.396435 TGAGGTCGCTGTCCATTGTT 59.604 50.000 0.00 0.00 0.00 2.83
736 987 2.502510 CGCTGTCCATTGTTGCGC 60.503 61.111 0.00 0.00 40.15 6.09
791 1042 4.201822 GCGTGCACTCTTAAGATTTTAGGG 60.202 45.833 16.19 0.00 0.00 3.53
792 1043 4.332819 CGTGCACTCTTAAGATTTTAGGGG 59.667 45.833 16.19 0.00 0.00 4.79
793 1044 5.497474 GTGCACTCTTAAGATTTTAGGGGA 58.503 41.667 10.32 0.00 0.00 4.81
794 1045 5.944007 GTGCACTCTTAAGATTTTAGGGGAA 59.056 40.000 10.32 0.00 0.00 3.97
832 1083 1.617018 CCTCCATCTGGGCTTCGTCA 61.617 60.000 0.00 0.00 36.21 4.35
837 1088 2.288702 CCATCTGGGCTTCGTCATAGAG 60.289 54.545 0.00 0.00 0.00 2.43
839 1090 2.302260 TCTGGGCTTCGTCATAGAGAG 58.698 52.381 0.00 0.00 0.00 3.20
852 1103 0.710588 TAGAGAGGGCCTCCAACTGA 59.289 55.000 29.62 6.99 42.97 3.41
860 1111 0.176910 GCCTCCAACTGAGCTACCTC 59.823 60.000 0.00 0.00 39.98 3.85
949 1204 1.323534 CTACGTTTCAGCCGAAATCCG 59.676 52.381 0.00 1.43 42.90 4.18
972 1228 1.553690 ATCCCCGTCCAGAACACCAG 61.554 60.000 0.00 0.00 0.00 4.00
1278 1583 6.534634 AGCTTGTAAATTTATCGCCCTATCT 58.465 36.000 0.31 0.00 0.00 1.98
1329 1634 6.737346 CCGTTAGGAAAATCAACATTGGTTGT 60.737 38.462 7.37 0.00 46.53 3.32
1362 1667 1.645034 CACCAGAGGCGATTGTGTAG 58.355 55.000 0.00 0.00 0.00 2.74
1499 2215 7.581213 TGCCTCCAAATTAATGTATTACCTG 57.419 36.000 0.00 0.00 0.00 4.00
1537 2253 5.375773 TGATGTGGAATTTGAGAACTGTGA 58.624 37.500 0.00 0.00 0.00 3.58
1681 2397 7.367285 TCATTTGACCATGTAAAGTTTGTAGC 58.633 34.615 0.00 0.00 0.00 3.58
1705 2421 6.019801 GCGTCATACTGTTACGAATCTTGATT 60.020 38.462 12.27 0.00 38.89 2.57
1726 2442 1.860950 CGCGATGAGATAAGTTGGGTG 59.139 52.381 0.00 0.00 0.00 4.61
1745 2461 3.171528 GTGGGGTAAAGGTCTGTAGACT 58.828 50.000 11.45 0.00 44.20 3.24
1773 2494 1.002134 CACTCGCCCCCAACAATCT 60.002 57.895 0.00 0.00 0.00 2.40
2191 3195 5.070446 ACGCAGACATAAATCTTAGGATCCA 59.930 40.000 15.82 0.00 0.00 3.41
2209 3213 8.370493 AGGATCCATTTATATATTTCGCGATG 57.630 34.615 15.82 0.00 0.00 3.84
2246 3250 5.861787 GCGTTTTTCATTGTAGCCATAAAGT 59.138 36.000 0.00 0.00 0.00 2.66
2348 3352 4.003648 CTCTCATTTCCTTTGTAAGCCGT 58.996 43.478 0.00 0.00 0.00 5.68
2361 3365 7.332678 CCTTTGTAAGCCGTACTACAATACTTT 59.667 37.037 6.34 0.00 33.20 2.66
2372 3376 9.706691 CGTACTACAATACTTTCCATCCAATAT 57.293 33.333 0.00 0.00 0.00 1.28
2412 3416 8.740123 TCCTTTGACATTTGAGTTTAACAGTA 57.260 30.769 0.00 0.00 0.00 2.74
2509 3520 9.920946 AGGCCTTTGAATTTATCATAACTTCTA 57.079 29.630 0.00 0.00 38.03 2.10
2553 3564 8.233868 TGTTTAATGATCTTGTAATGTGGTTCG 58.766 33.333 0.00 0.00 0.00 3.95
2559 3570 9.778741 ATGATCTTGTAATGTGGTTCGTATATT 57.221 29.630 0.00 0.00 0.00 1.28
2672 3683 1.068121 AGGCTAGCAAAGAAGGTGGT 58.932 50.000 18.24 0.00 0.00 4.16
2748 3759 2.420687 GGAGGCTTATGCTGCTTACTGT 60.421 50.000 0.00 0.00 39.59 3.55
2860 3877 7.831753 TCTGTAACCAGTTTTGTGAAATCAAA 58.168 30.769 0.00 0.00 39.82 2.69
2867 3884 8.791675 ACCAGTTTTGTGAAATCAAATTTTGTT 58.208 25.926 8.89 0.00 37.20 2.83
2924 3941 4.938575 TTATCTGTAGCCTCCCCAAAAA 57.061 40.909 0.00 0.00 0.00 1.94
2981 4000 3.366396 TCTCTAGCCCGTCTCTCAAAAT 58.634 45.455 0.00 0.00 0.00 1.82
3058 4077 1.454847 TGCCGCCAAAGACCAAAGT 60.455 52.632 0.00 0.00 0.00 2.66
3059 4078 1.007387 GCCGCCAAAGACCAAAGTG 60.007 57.895 0.00 0.00 0.00 3.16
3060 4079 1.659794 CCGCCAAAGACCAAAGTGG 59.340 57.895 0.00 0.00 45.02 4.00
3061 4080 0.821711 CCGCCAAAGACCAAAGTGGA 60.822 55.000 0.18 0.00 40.96 4.02
3062 4081 1.028905 CGCCAAAGACCAAAGTGGAA 58.971 50.000 0.18 0.00 40.96 3.53
3063 4082 1.407258 CGCCAAAGACCAAAGTGGAAA 59.593 47.619 0.18 0.00 40.96 3.13
3064 4083 2.543653 CGCCAAAGACCAAAGTGGAAAG 60.544 50.000 0.18 0.00 40.96 2.62
3065 4084 2.693074 GCCAAAGACCAAAGTGGAAAGA 59.307 45.455 0.18 0.00 40.96 2.52
3066 4085 3.132111 GCCAAAGACCAAAGTGGAAAGAA 59.868 43.478 0.18 0.00 40.96 2.52
3067 4086 4.382577 GCCAAAGACCAAAGTGGAAAGAAA 60.383 41.667 0.18 0.00 40.96 2.52
3068 4087 5.684813 GCCAAAGACCAAAGTGGAAAGAAAT 60.685 40.000 0.18 0.00 40.96 2.17
3069 4088 6.348498 CCAAAGACCAAAGTGGAAAGAAATT 58.652 36.000 0.18 0.00 40.96 1.82
3070 4089 7.496747 CCAAAGACCAAAGTGGAAAGAAATTA 58.503 34.615 0.18 0.00 40.96 1.40
3071 4090 8.150296 CCAAAGACCAAAGTGGAAAGAAATTAT 58.850 33.333 0.18 0.00 40.96 1.28
3075 4094 9.753674 AGACCAAAGTGGAAAGAAATTATATGA 57.246 29.630 0.18 0.00 40.96 2.15
3077 4096 9.753674 ACCAAAGTGGAAAGAAATTATATGAGA 57.246 29.630 0.18 0.00 40.96 3.27
3080 4099 9.753674 AAAGTGGAAAGAAATTATATGAGACCA 57.246 29.630 0.00 0.00 0.00 4.02
3081 4100 8.970859 AGTGGAAAGAAATTATATGAGACCAG 57.029 34.615 0.00 0.00 0.00 4.00
3082 4101 7.995488 AGTGGAAAGAAATTATATGAGACCAGG 59.005 37.037 0.00 0.00 0.00 4.45
3083 4102 7.775561 GTGGAAAGAAATTATATGAGACCAGGT 59.224 37.037 0.00 0.00 0.00 4.00
3084 4103 7.993183 TGGAAAGAAATTATATGAGACCAGGTC 59.007 37.037 12.25 12.25 0.00 3.85
3085 4104 8.214364 GGAAAGAAATTATATGAGACCAGGTCT 58.786 37.037 23.18 23.18 46.42 3.85
3086 4105 9.620259 GAAAGAAATTATATGAGACCAGGTCTT 57.380 33.333 23.78 11.23 43.53 3.01
3089 4108 8.361139 AGAAATTATATGAGACCAGGTCTTACG 58.639 37.037 23.78 0.00 43.53 3.18
3090 4109 6.591750 ATTATATGAGACCAGGTCTTACGG 57.408 41.667 23.78 0.00 43.53 4.02
3091 4110 2.233305 ATGAGACCAGGTCTTACGGT 57.767 50.000 23.78 1.68 43.53 4.83
3092 4111 2.005370 TGAGACCAGGTCTTACGGTT 57.995 50.000 23.78 0.00 43.53 4.44
3093 4112 3.159213 TGAGACCAGGTCTTACGGTTA 57.841 47.619 23.78 2.19 43.53 2.85
3094 4113 3.087031 TGAGACCAGGTCTTACGGTTAG 58.913 50.000 23.78 0.00 43.53 2.34
3095 4114 1.823610 AGACCAGGTCTTACGGTTAGC 59.176 52.381 17.31 0.00 40.28 3.09
3096 4115 1.547372 GACCAGGTCTTACGGTTAGCA 59.453 52.381 12.94 0.00 31.63 3.49
3097 4116 1.549170 ACCAGGTCTTACGGTTAGCAG 59.451 52.381 0.00 0.00 0.00 4.24
3098 4117 1.134788 CCAGGTCTTACGGTTAGCAGG 60.135 57.143 0.00 0.00 0.00 4.85
3099 4118 1.549170 CAGGTCTTACGGTTAGCAGGT 59.451 52.381 0.00 0.00 0.00 4.00
3100 4119 1.549170 AGGTCTTACGGTTAGCAGGTG 59.451 52.381 0.00 0.00 0.00 4.00
3101 4120 1.547372 GGTCTTACGGTTAGCAGGTGA 59.453 52.381 0.00 0.00 0.00 4.02
3102 4121 2.416972 GGTCTTACGGTTAGCAGGTGAG 60.417 54.545 0.00 0.00 0.00 3.51
3103 4122 2.490903 GTCTTACGGTTAGCAGGTGAGA 59.509 50.000 0.00 0.00 0.00 3.27
3104 4123 2.490903 TCTTACGGTTAGCAGGTGAGAC 59.509 50.000 0.00 0.00 0.00 3.36
3105 4124 1.180029 TACGGTTAGCAGGTGAGACC 58.820 55.000 0.00 0.00 38.99 3.85
3106 4125 1.218316 CGGTTAGCAGGTGAGACCC 59.782 63.158 0.00 0.00 39.75 4.46
3107 4126 1.541310 CGGTTAGCAGGTGAGACCCA 61.541 60.000 0.00 0.00 39.75 4.51
3108 4127 0.036294 GGTTAGCAGGTGAGACCCAC 60.036 60.000 0.00 0.00 39.75 4.61
3116 4135 1.604378 GTGAGACCCACCCTGATGG 59.396 63.158 0.00 0.00 39.86 3.51
3117 4136 0.909610 GTGAGACCCACCCTGATGGA 60.910 60.000 0.00 0.00 43.02 3.41
3118 4137 0.044702 TGAGACCCACCCTGATGGAT 59.955 55.000 0.00 0.00 43.02 3.41
3119 4138 0.471617 GAGACCCACCCTGATGGATG 59.528 60.000 0.00 0.00 43.02 3.51
3120 4139 0.044702 AGACCCACCCTGATGGATGA 59.955 55.000 0.00 0.00 43.02 2.92
3121 4140 0.181350 GACCCACCCTGATGGATGAC 59.819 60.000 0.00 0.00 43.02 3.06
3122 4141 0.549902 ACCCACCCTGATGGATGACA 60.550 55.000 0.00 0.00 43.02 3.58
3123 4142 0.107017 CCCACCCTGATGGATGACAC 60.107 60.000 0.00 0.00 43.02 3.67
3124 4143 0.462581 CCACCCTGATGGATGACACG 60.463 60.000 0.00 0.00 43.02 4.49
3125 4144 0.250234 CACCCTGATGGATGACACGT 59.750 55.000 0.00 0.00 38.00 4.49
3126 4145 0.250234 ACCCTGATGGATGACACGTG 59.750 55.000 15.48 15.48 38.00 4.49
3127 4146 0.536724 CCCTGATGGATGACACGTGA 59.463 55.000 25.01 0.00 35.39 4.35
3128 4147 1.645034 CCTGATGGATGACACGTGAC 58.355 55.000 25.01 17.68 34.57 3.67
3129 4148 1.066929 CCTGATGGATGACACGTGACA 60.067 52.381 25.01 23.44 34.57 3.58
3130 4149 2.419159 CCTGATGGATGACACGTGACAT 60.419 50.000 28.93 28.93 34.57 3.06
3131 4150 3.264947 CTGATGGATGACACGTGACATT 58.735 45.455 29.08 16.96 31.08 2.71
3132 4151 3.261580 TGATGGATGACACGTGACATTC 58.738 45.455 29.08 27.59 31.08 2.67
3133 4152 2.829741 TGGATGACACGTGACATTCA 57.170 45.000 29.97 29.97 34.27 2.57
3134 4153 3.333029 TGGATGACACGTGACATTCAT 57.667 42.857 29.97 23.52 32.30 2.57
3135 4154 4.464069 TGGATGACACGTGACATTCATA 57.536 40.909 29.97 14.55 32.30 2.15
3136 4155 4.826556 TGGATGACACGTGACATTCATAA 58.173 39.130 29.97 13.93 32.30 1.90
3137 4156 5.241662 TGGATGACACGTGACATTCATAAA 58.758 37.500 29.97 13.62 32.30 1.40
3138 4157 5.879777 TGGATGACACGTGACATTCATAAAT 59.120 36.000 29.97 11.24 32.30 1.40
3139 4158 6.037062 TGGATGACACGTGACATTCATAAATC 59.963 38.462 29.97 17.85 32.30 2.17
3140 4159 6.258727 GGATGACACGTGACATTCATAAATCT 59.741 38.462 29.08 8.75 31.08 2.40
3141 4160 7.201644 GGATGACACGTGACATTCATAAATCTT 60.202 37.037 29.08 8.27 31.08 2.40
3142 4161 8.716646 ATGACACGTGACATTCATAAATCTTA 57.283 30.769 24.49 0.00 0.00 2.10
3143 4162 8.541133 TGACACGTGACATTCATAAATCTTAA 57.459 30.769 25.01 0.00 0.00 1.85
3144 4163 8.994170 TGACACGTGACATTCATAAATCTTAAA 58.006 29.630 25.01 0.00 0.00 1.52
3145 4164 9.820229 GACACGTGACATTCATAAATCTTAAAA 57.180 29.630 25.01 0.00 0.00 1.52
3146 4165 9.607285 ACACGTGACATTCATAAATCTTAAAAC 57.393 29.630 25.01 0.00 0.00 2.43
3147 4166 9.605955 CACGTGACATTCATAAATCTTAAAACA 57.394 29.630 10.90 0.00 0.00 2.83
3164 4183 9.672673 TCTTAAAACATCTAATTTCTCTCCCTG 57.327 33.333 0.00 0.00 0.00 4.45
3165 4184 9.672673 CTTAAAACATCTAATTTCTCTCCCTGA 57.327 33.333 0.00 0.00 0.00 3.86
3168 4187 9.539194 AAAACATCTAATTTCTCTCCCTGATTT 57.461 29.630 0.00 0.00 0.00 2.17
3169 4188 9.539194 AAACATCTAATTTCTCTCCCTGATTTT 57.461 29.630 0.00 0.00 0.00 1.82
3177 4196 9.467796 AATTTCTCTCCCTGATTTTAAGTAAGG 57.532 33.333 0.00 0.00 0.00 2.69
3179 4198 5.428783 TCTCTCCCTGATTTTAAGTAAGGGG 59.571 44.000 9.72 2.00 46.53 4.79
3180 4199 5.105853 TCTCCCTGATTTTAAGTAAGGGGT 58.894 41.667 9.72 0.00 46.53 4.95
3181 4200 5.045140 TCTCCCTGATTTTAAGTAAGGGGTG 60.045 44.000 9.72 4.35 46.53 4.61
3182 4201 4.017867 TCCCTGATTTTAAGTAAGGGGTGG 60.018 45.833 9.72 0.00 46.53 4.61
3183 4202 4.278310 CCTGATTTTAAGTAAGGGGTGGG 58.722 47.826 0.00 0.00 0.00 4.61
3184 4203 4.278310 CTGATTTTAAGTAAGGGGTGGGG 58.722 47.826 0.00 0.00 0.00 4.96
3185 4204 3.663632 TGATTTTAAGTAAGGGGTGGGGT 59.336 43.478 0.00 0.00 0.00 4.95
3186 4205 4.856765 TGATTTTAAGTAAGGGGTGGGGTA 59.143 41.667 0.00 0.00 0.00 3.69
3187 4206 5.315377 TGATTTTAAGTAAGGGGTGGGGTAA 59.685 40.000 0.00 0.00 0.00 2.85
3188 4207 5.676470 TTTTAAGTAAGGGGTGGGGTAAA 57.324 39.130 0.00 0.00 0.00 2.01
3189 4208 5.882076 TTTAAGTAAGGGGTGGGGTAAAT 57.118 39.130 0.00 0.00 0.00 1.40
3190 4209 3.750501 AAGTAAGGGGTGGGGTAAATG 57.249 47.619 0.00 0.00 0.00 2.32
3191 4210 2.651190 AGTAAGGGGTGGGGTAAATGT 58.349 47.619 0.00 0.00 0.00 2.71
3192 4211 2.998186 AGTAAGGGGTGGGGTAAATGTT 59.002 45.455 0.00 0.00 0.00 2.71
3193 4212 3.403394 AGTAAGGGGTGGGGTAAATGTTT 59.597 43.478 0.00 0.00 0.00 2.83
3194 4213 3.354233 AAGGGGTGGGGTAAATGTTTT 57.646 42.857 0.00 0.00 0.00 2.43
3195 4214 2.615391 AGGGGTGGGGTAAATGTTTTG 58.385 47.619 0.00 0.00 0.00 2.44
3196 4215 2.090437 AGGGGTGGGGTAAATGTTTTGT 60.090 45.455 0.00 0.00 0.00 2.83
3197 4216 2.037902 GGGGTGGGGTAAATGTTTTGTG 59.962 50.000 0.00 0.00 0.00 3.33
3198 4217 2.966516 GGGTGGGGTAAATGTTTTGTGA 59.033 45.455 0.00 0.00 0.00 3.58
3199 4218 3.580895 GGGTGGGGTAAATGTTTTGTGAT 59.419 43.478 0.00 0.00 0.00 3.06
3200 4219 4.041075 GGGTGGGGTAAATGTTTTGTGATT 59.959 41.667 0.00 0.00 0.00 2.57
3201 4220 5.455469 GGGTGGGGTAAATGTTTTGTGATTT 60.455 40.000 0.00 0.00 0.00 2.17
3202 4221 5.468409 GGTGGGGTAAATGTTTTGTGATTTG 59.532 40.000 0.00 0.00 0.00 2.32
3203 4222 6.052360 GTGGGGTAAATGTTTTGTGATTTGT 58.948 36.000 0.00 0.00 0.00 2.83
3204 4223 7.210873 GTGGGGTAAATGTTTTGTGATTTGTA 58.789 34.615 0.00 0.00 0.00 2.41
3205 4224 7.711339 GTGGGGTAAATGTTTTGTGATTTGTAA 59.289 33.333 0.00 0.00 0.00 2.41
3206 4225 8.265055 TGGGGTAAATGTTTTGTGATTTGTAAA 58.735 29.630 0.00 0.00 0.00 2.01
3207 4226 9.278978 GGGGTAAATGTTTTGTGATTTGTAAAT 57.721 29.630 0.00 0.00 0.00 1.40
3209 4228 9.592720 GGTAAATGTTTTGTGATTTGTAAATGC 57.407 29.630 0.00 0.00 0.00 3.56
3210 4229 9.592720 GTAAATGTTTTGTGATTTGTAAATGCC 57.407 29.630 0.00 0.00 0.00 4.40
3211 4230 7.798596 AATGTTTTGTGATTTGTAAATGCCA 57.201 28.000 0.00 0.00 0.00 4.92
3212 4231 6.595772 TGTTTTGTGATTTGTAAATGCCAC 57.404 33.333 0.00 0.00 0.00 5.01
3213 4232 5.233050 TGTTTTGTGATTTGTAAATGCCACG 59.767 36.000 0.00 0.00 30.17 4.94
3214 4233 4.576216 TTGTGATTTGTAAATGCCACGT 57.424 36.364 0.00 0.00 30.17 4.49
3215 4234 3.894920 TGTGATTTGTAAATGCCACGTG 58.105 40.909 9.08 9.08 30.17 4.49
3216 4235 3.316588 TGTGATTTGTAAATGCCACGTGT 59.683 39.130 15.65 0.00 30.17 4.49
3217 4236 3.911964 GTGATTTGTAAATGCCACGTGTC 59.088 43.478 15.65 0.98 0.00 3.67
3218 4237 3.565902 TGATTTGTAAATGCCACGTGTCA 59.434 39.130 15.65 8.63 0.00 3.58
3219 4238 4.217334 TGATTTGTAAATGCCACGTGTCAT 59.783 37.500 15.65 11.07 0.00 3.06
3220 4239 4.576216 TTTGTAAATGCCACGTGTCATT 57.424 36.364 18.45 18.45 34.66 2.57
3221 4240 3.822594 TGTAAATGCCACGTGTCATTC 57.177 42.857 23.50 13.46 32.27 2.67
3222 4241 3.142174 TGTAAATGCCACGTGTCATTCA 58.858 40.909 23.50 15.73 32.27 2.57
3223 4242 3.755905 TGTAAATGCCACGTGTCATTCAT 59.244 39.130 23.50 12.64 32.27 2.57
3224 4243 3.492421 AAATGCCACGTGTCATTCATC 57.508 42.857 23.50 0.00 32.27 2.92
3225 4244 2.112380 ATGCCACGTGTCATTCATCA 57.888 45.000 15.65 0.00 0.00 3.07
3226 4245 1.441738 TGCCACGTGTCATTCATCAG 58.558 50.000 15.65 0.00 0.00 2.90
3227 4246 1.001860 TGCCACGTGTCATTCATCAGA 59.998 47.619 15.65 0.00 0.00 3.27
3228 4247 2.076100 GCCACGTGTCATTCATCAGAA 58.924 47.619 15.65 0.00 38.31 3.02
3229 4248 2.679837 GCCACGTGTCATTCATCAGAAT 59.320 45.455 15.65 0.00 45.16 2.40
3238 4257 2.315925 TTCATCAGAATGGGTCTCGC 57.684 50.000 0.00 0.00 32.70 5.03
3239 4258 0.103026 TCATCAGAATGGGTCTCGCG 59.897 55.000 0.00 0.00 32.70 5.87
3240 4259 0.179100 CATCAGAATGGGTCTCGCGT 60.179 55.000 5.77 0.00 32.70 6.01
3241 4260 0.179100 ATCAGAATGGGTCTCGCGTG 60.179 55.000 5.77 3.13 32.70 5.34
3242 4261 1.215382 CAGAATGGGTCTCGCGTGA 59.785 57.895 5.77 6.33 32.70 4.35
3243 4262 0.803768 CAGAATGGGTCTCGCGTGAG 60.804 60.000 19.99 19.99 43.99 3.51
3250 4269 3.759544 TCTCGCGTGAGACTTGGT 58.240 55.556 24.28 0.00 46.25 3.67
3251 4270 2.038690 TCTCGCGTGAGACTTGGTT 58.961 52.632 24.28 0.00 46.25 3.67
3252 4271 0.387929 TCTCGCGTGAGACTTGGTTT 59.612 50.000 24.28 0.00 46.25 3.27
3253 4272 0.784778 CTCGCGTGAGACTTGGTTTC 59.215 55.000 21.40 0.00 45.57 2.78
3254 4273 0.103390 TCGCGTGAGACTTGGTTTCA 59.897 50.000 5.77 0.00 0.00 2.69
3255 4274 1.148310 CGCGTGAGACTTGGTTTCAT 58.852 50.000 0.00 0.00 29.77 2.57
3256 4275 2.029739 TCGCGTGAGACTTGGTTTCATA 60.030 45.455 5.77 0.00 29.77 2.15
3257 4276 2.734606 CGCGTGAGACTTGGTTTCATAA 59.265 45.455 0.00 0.00 29.77 1.90
3258 4277 3.185594 CGCGTGAGACTTGGTTTCATAAA 59.814 43.478 0.00 0.00 29.77 1.40
3259 4278 4.319190 CGCGTGAGACTTGGTTTCATAAAA 60.319 41.667 0.00 0.00 29.77 1.52
3260 4279 5.616866 CGCGTGAGACTTGGTTTCATAAAAT 60.617 40.000 0.00 0.00 29.77 1.82
3261 4280 6.149633 GCGTGAGACTTGGTTTCATAAAATT 58.850 36.000 0.00 0.00 29.77 1.82
3262 4281 6.305638 GCGTGAGACTTGGTTTCATAAAATTC 59.694 38.462 0.00 0.00 29.77 2.17
3263 4282 7.584987 CGTGAGACTTGGTTTCATAAAATTCT 58.415 34.615 0.00 0.00 29.77 2.40
3264 4283 8.076178 CGTGAGACTTGGTTTCATAAAATTCTT 58.924 33.333 0.00 0.00 29.77 2.52
3265 4284 9.750125 GTGAGACTTGGTTTCATAAAATTCTTT 57.250 29.630 0.00 0.00 29.77 2.52
3268 4287 9.764363 AGACTTGGTTTCATAAAATTCTTTTCC 57.236 29.630 0.00 0.00 34.19 3.13
3269 4288 8.587952 ACTTGGTTTCATAAAATTCTTTTCCG 57.412 30.769 0.00 0.00 34.19 4.30
3270 4289 8.417884 ACTTGGTTTCATAAAATTCTTTTCCGA 58.582 29.630 0.00 0.00 34.19 4.55
3271 4290 8.582433 TTGGTTTCATAAAATTCTTTTCCGAC 57.418 30.769 0.00 0.00 34.19 4.79
3272 4291 7.149307 TGGTTTCATAAAATTCTTTTCCGACC 58.851 34.615 0.00 0.00 34.19 4.79
3273 4292 7.149307 GGTTTCATAAAATTCTTTTCCGACCA 58.851 34.615 0.00 0.00 34.19 4.02
3274 4293 7.654116 GGTTTCATAAAATTCTTTTCCGACCAA 59.346 33.333 0.00 0.00 34.19 3.67
3275 4294 9.036671 GTTTCATAAAATTCTTTTCCGACCAAA 57.963 29.630 0.00 0.00 34.19 3.28
3276 4295 8.810652 TTCATAAAATTCTTTTCCGACCAAAG 57.189 30.769 0.00 0.00 34.19 2.77
3288 4307 2.349590 CGACCAAAGACATCTGCATCA 58.650 47.619 0.00 0.00 0.00 3.07
3306 4325 0.820891 CACTGCTGGTTCACTGCCTT 60.821 55.000 0.00 0.00 42.74 4.35
3307 4326 0.820891 ACTGCTGGTTCACTGCCTTG 60.821 55.000 0.00 0.00 42.74 3.61
3308 4327 0.535780 CTGCTGGTTCACTGCCTTGA 60.536 55.000 0.00 0.00 42.74 3.02
3309 4328 0.535780 TGCTGGTTCACTGCCTTGAG 60.536 55.000 0.00 0.00 42.74 3.02
3310 4329 0.250467 GCTGGTTCACTGCCTTGAGA 60.250 55.000 0.00 0.00 38.01 3.27
3311 4330 1.517242 CTGGTTCACTGCCTTGAGAC 58.483 55.000 0.00 0.00 0.00 3.36
3312 4331 0.249868 TGGTTCACTGCCTTGAGACG 60.250 55.000 0.00 0.00 0.00 4.18
3313 4332 0.033504 GGTTCACTGCCTTGAGACGA 59.966 55.000 0.00 0.00 0.00 4.20
3314 4333 1.338200 GGTTCACTGCCTTGAGACGAT 60.338 52.381 0.00 0.00 0.00 3.73
3315 4334 2.417719 GTTCACTGCCTTGAGACGATT 58.582 47.619 0.00 0.00 0.00 3.34
3316 4335 2.370281 TCACTGCCTTGAGACGATTC 57.630 50.000 0.00 0.00 0.00 2.52
3317 4336 1.895798 TCACTGCCTTGAGACGATTCT 59.104 47.619 0.00 0.00 33.37 2.40
3318 4337 2.300152 TCACTGCCTTGAGACGATTCTT 59.700 45.455 0.00 0.00 29.47 2.52
3319 4338 3.509967 TCACTGCCTTGAGACGATTCTTA 59.490 43.478 0.00 0.00 29.47 2.10
3320 4339 4.021456 TCACTGCCTTGAGACGATTCTTAA 60.021 41.667 0.00 0.00 29.47 1.85
3321 4340 4.328440 CACTGCCTTGAGACGATTCTTAAG 59.672 45.833 0.00 0.00 42.53 1.85
3322 4341 3.262420 TGCCTTGAGACGATTCTTAAGC 58.738 45.455 0.00 0.00 41.87 3.09
3323 4342 3.055819 TGCCTTGAGACGATTCTTAAGCT 60.056 43.478 0.00 0.00 41.87 3.74
3324 4343 3.308323 GCCTTGAGACGATTCTTAAGCTG 59.692 47.826 0.00 0.00 41.87 4.24
3325 4344 4.748892 CCTTGAGACGATTCTTAAGCTGA 58.251 43.478 0.00 0.00 41.87 4.26
3326 4345 4.803088 CCTTGAGACGATTCTTAAGCTGAG 59.197 45.833 0.00 0.00 41.87 3.35
3327 4346 5.392767 TTGAGACGATTCTTAAGCTGAGT 57.607 39.130 0.00 0.00 29.47 3.41
3328 4347 4.987832 TGAGACGATTCTTAAGCTGAGTC 58.012 43.478 0.00 5.40 29.47 3.36
3329 4348 4.022464 AGACGATTCTTAAGCTGAGTCG 57.978 45.455 13.56 13.56 45.05 4.18
3330 4349 2.531206 ACGATTCTTAAGCTGAGTCGC 58.469 47.619 14.65 0.00 43.96 5.19
3331 4350 1.855360 CGATTCTTAAGCTGAGTCGCC 59.145 52.381 4.85 0.00 37.00 5.54
3332 4351 2.205911 GATTCTTAAGCTGAGTCGCCC 58.794 52.381 0.00 0.00 0.00 6.13
3333 4352 1.267121 TTCTTAAGCTGAGTCGCCCT 58.733 50.000 0.00 0.00 0.00 5.19
3334 4353 1.267121 TCTTAAGCTGAGTCGCCCTT 58.733 50.000 0.00 0.38 0.00 3.95
3335 4354 1.066858 TCTTAAGCTGAGTCGCCCTTG 60.067 52.381 0.00 0.00 0.00 3.61
3336 4355 0.673644 TTAAGCTGAGTCGCCCTTGC 60.674 55.000 0.00 0.00 0.00 4.01
3337 4356 1.544825 TAAGCTGAGTCGCCCTTGCT 61.545 55.000 0.00 0.00 35.64 3.91
3338 4357 2.359230 GCTGAGTCGCCCTTGCTT 60.359 61.111 0.00 0.00 34.43 3.91
3339 4358 1.968540 GCTGAGTCGCCCTTGCTTT 60.969 57.895 0.00 0.00 34.43 3.51
3340 4359 1.916697 GCTGAGTCGCCCTTGCTTTC 61.917 60.000 0.00 0.00 34.43 2.62
3341 4360 1.301677 CTGAGTCGCCCTTGCTTTCC 61.302 60.000 0.00 0.00 34.43 3.13
3342 4361 1.003233 GAGTCGCCCTTGCTTTCCT 60.003 57.895 0.00 0.00 34.43 3.36
3343 4362 1.003233 AGTCGCCCTTGCTTTCCTC 60.003 57.895 0.00 0.00 34.43 3.71
3344 4363 2.041115 GTCGCCCTTGCTTTCCTCC 61.041 63.158 0.00 0.00 34.43 4.30
3345 4364 2.224159 TCGCCCTTGCTTTCCTCCT 61.224 57.895 0.00 0.00 34.43 3.69
3346 4365 1.303643 CGCCCTTGCTTTCCTCCTT 60.304 57.895 0.00 0.00 34.43 3.36
3356 4375 0.324943 TTTCCTCCTTGGCTCCTTCG 59.675 55.000 0.00 0.00 35.26 3.79
3366 4385 1.448717 GCTCCTTCGGTCCAAGAGC 60.449 63.158 0.00 0.00 0.00 4.09
3371 4390 1.275291 CCTTCGGTCCAAGAGCTTGTA 59.725 52.381 9.18 0.00 38.85 2.41
3380 4399 4.014406 TCCAAGAGCTTGTAGTCGTATCA 58.986 43.478 9.18 0.00 38.85 2.15
3422 4441 2.202570 CCGTGTCGTCCGGTCATC 60.203 66.667 0.00 0.00 40.59 2.92
3436 4456 0.874390 GTCATCGCTTTTCTGCACCA 59.126 50.000 0.00 0.00 0.00 4.17
3479 4499 1.202710 TCGGCCTTTTCTGCACTGTAA 60.203 47.619 0.00 0.00 0.00 2.41
3480 4500 1.197721 CGGCCTTTTCTGCACTGTAAG 59.802 52.381 0.00 0.00 42.29 2.34
3481 4501 2.504367 GGCCTTTTCTGCACTGTAAGA 58.496 47.619 0.00 0.00 37.43 2.10
3482 4502 2.485814 GGCCTTTTCTGCACTGTAAGAG 59.514 50.000 0.00 0.00 37.43 2.85
3494 4514 5.885230 CACTGTAAGAGCAATTCCAATGA 57.115 39.130 0.00 0.00 37.43 2.57
3495 4515 5.877031 CACTGTAAGAGCAATTCCAATGAG 58.123 41.667 0.00 0.00 37.43 2.90
3496 4516 4.946157 ACTGTAAGAGCAATTCCAATGAGG 59.054 41.667 0.00 0.00 37.43 3.86
3497 4517 3.696051 TGTAAGAGCAATTCCAATGAGGC 59.304 43.478 0.00 0.00 37.29 4.70
3498 4518 1.386533 AGAGCAATTCCAATGAGGCG 58.613 50.000 0.00 0.00 37.29 5.52
3499 4519 1.065199 AGAGCAATTCCAATGAGGCGA 60.065 47.619 0.00 0.00 37.29 5.54
3500 4520 1.952296 GAGCAATTCCAATGAGGCGAT 59.048 47.619 0.00 0.00 37.29 4.58
3501 4521 1.952296 AGCAATTCCAATGAGGCGATC 59.048 47.619 0.00 0.00 37.29 3.69
3502 4522 1.334419 GCAATTCCAATGAGGCGATCG 60.334 52.381 11.69 11.69 37.29 3.69
3503 4523 1.942657 CAATTCCAATGAGGCGATCGT 59.057 47.619 17.81 0.00 37.29 3.73
3504 4524 1.871080 ATTCCAATGAGGCGATCGTC 58.129 50.000 12.83 12.83 37.29 4.20
3505 4525 0.527600 TTCCAATGAGGCGATCGTCG 60.528 55.000 17.81 0.29 43.89 5.12
3506 4526 1.226974 CCAATGAGGCGATCGTCGT 60.227 57.895 17.81 10.49 42.81 4.34
3507 4527 1.209275 CCAATGAGGCGATCGTCGTC 61.209 60.000 17.81 18.37 46.20 4.20
3512 4532 4.104143 GGCGATCGTCGTCCATTT 57.896 55.556 17.81 0.00 42.81 2.32
3513 4533 2.380081 GGCGATCGTCGTCCATTTT 58.620 52.632 17.81 0.00 42.81 1.82
3514 4534 0.725117 GGCGATCGTCGTCCATTTTT 59.275 50.000 17.81 0.00 42.81 1.94
3534 4554 6.548441 TTTTTATCTGTTTGAATCGGACGT 57.452 33.333 0.00 0.00 0.00 4.34
3535 4555 5.773239 TTTATCTGTTTGAATCGGACGTC 57.227 39.130 7.13 7.13 0.00 4.34
3536 4556 1.693467 TCTGTTTGAATCGGACGTCG 58.307 50.000 9.92 5.26 40.90 5.12
3537 4557 0.713883 CTGTTTGAATCGGACGTCGG 59.286 55.000 16.37 16.37 39.77 4.79
3538 4558 0.314618 TGTTTGAATCGGACGTCGGA 59.685 50.000 25.46 25.46 39.77 4.55
3539 4559 0.712222 GTTTGAATCGGACGTCGGAC 59.288 55.000 25.73 15.57 39.77 4.79
3540 4560 0.388907 TTTGAATCGGACGTCGGACC 60.389 55.000 25.73 19.99 39.77 4.46
3541 4561 2.103736 GAATCGGACGTCGGACCC 59.896 66.667 25.73 16.78 39.77 4.46
3542 4562 3.746409 GAATCGGACGTCGGACCCG 62.746 68.421 25.73 16.40 44.22 5.28
3552 4572 4.807039 CGGACCCGACGGCGATTT 62.807 66.667 15.16 0.00 42.83 2.17
3553 4573 2.889018 GGACCCGACGGCGATTTC 60.889 66.667 15.16 4.63 40.82 2.17
3554 4574 2.125832 GACCCGACGGCGATTTCA 60.126 61.111 15.16 0.00 40.82 2.69
3555 4575 1.520787 GACCCGACGGCGATTTCAT 60.521 57.895 15.16 0.00 40.82 2.57
3556 4576 1.488261 GACCCGACGGCGATTTCATC 61.488 60.000 15.16 0.00 40.82 2.92
3557 4577 2.244651 CCCGACGGCGATTTCATCC 61.245 63.158 15.16 0.00 40.82 3.51
3562 4582 3.988459 CGGCGATTTCATCCGTTTT 57.012 47.368 0.00 0.00 38.47 2.43
3563 4583 2.256445 CGGCGATTTCATCCGTTTTT 57.744 45.000 0.00 0.00 38.47 1.94
3582 4602 4.635833 TTTTTACTCGTTTGGGTTGGTC 57.364 40.909 0.00 0.00 0.00 4.02
3583 4603 1.868469 TTACTCGTTTGGGTTGGTCG 58.132 50.000 0.00 0.00 0.00 4.79
3584 4604 0.600782 TACTCGTTTGGGTTGGTCGC 60.601 55.000 0.00 0.00 0.00 5.19
3585 4605 2.592287 TCGTTTGGGTTGGTCGCC 60.592 61.111 0.00 0.00 0.00 5.54
3586 4606 3.666253 CGTTTGGGTTGGTCGCCC 61.666 66.667 0.00 0.00 46.26 6.13
3609 4629 4.968197 GCGTCCGCCCTATCTTAG 57.032 61.111 0.00 0.00 34.56 2.18
3610 4630 2.338381 GCGTCCGCCCTATCTTAGA 58.662 57.895 0.00 0.00 34.56 2.10
3611 4631 0.889306 GCGTCCGCCCTATCTTAGAT 59.111 55.000 0.00 0.00 34.56 1.98
3612 4632 2.089980 GCGTCCGCCCTATCTTAGATA 58.910 52.381 0.00 1.70 34.56 1.98
3613 4633 2.688958 GCGTCCGCCCTATCTTAGATAT 59.311 50.000 2.08 0.00 34.56 1.63
3614 4634 3.489398 GCGTCCGCCCTATCTTAGATATG 60.489 52.174 2.08 0.19 34.56 1.78
3615 4635 3.066900 CGTCCGCCCTATCTTAGATATGG 59.933 52.174 16.12 16.12 0.00 2.74
3616 4636 3.385111 GTCCGCCCTATCTTAGATATGGG 59.615 52.174 21.83 21.83 37.76 4.00
3617 4637 3.012502 TCCGCCCTATCTTAGATATGGGT 59.987 47.826 24.34 0.00 37.09 4.51
3618 4638 3.385111 CCGCCCTATCTTAGATATGGGTC 59.615 52.174 24.34 18.84 37.09 4.46
3619 4639 3.066900 CGCCCTATCTTAGATATGGGTCG 59.933 52.174 24.34 23.01 37.09 4.79
3620 4640 4.279145 GCCCTATCTTAGATATGGGTCGA 58.721 47.826 24.34 0.00 37.09 4.20
3621 4641 4.098196 GCCCTATCTTAGATATGGGTCGAC 59.902 50.000 24.34 7.13 37.09 4.20
3622 4642 5.262009 CCCTATCTTAGATATGGGTCGACA 58.738 45.833 18.91 0.00 0.00 4.35
3623 4643 5.358442 CCCTATCTTAGATATGGGTCGACAG 59.642 48.000 18.91 2.52 0.00 3.51
3624 4644 4.792521 ATCTTAGATATGGGTCGACAGC 57.207 45.455 18.91 0.00 0.00 4.40
3625 4645 3.562182 TCTTAGATATGGGTCGACAGCA 58.438 45.455 18.91 0.00 0.00 4.41
3626 4646 3.318275 TCTTAGATATGGGTCGACAGCAC 59.682 47.826 18.91 4.90 0.00 4.40
3627 4647 0.385751 AGATATGGGTCGACAGCACG 59.614 55.000 18.91 0.00 0.00 5.34
3628 4648 1.215655 GATATGGGTCGACAGCACGC 61.216 60.000 18.91 0.00 0.00 5.34
3629 4649 2.644555 ATATGGGTCGACAGCACGCC 62.645 60.000 18.91 8.62 0.00 5.68
3632 4652 4.980805 GGTCGACAGCACGCCCAA 62.981 66.667 18.91 0.00 31.41 4.12
3633 4653 3.712881 GTCGACAGCACGCCCAAC 61.713 66.667 11.55 0.00 0.00 3.77
3645 4665 4.715523 CCCAACGCACCGACCCAT 62.716 66.667 0.00 0.00 0.00 4.00
3646 4666 2.266372 CCAACGCACCGACCCATA 59.734 61.111 0.00 0.00 0.00 2.74
3647 4667 1.153249 CCAACGCACCGACCCATAT 60.153 57.895 0.00 0.00 0.00 1.78
3648 4668 1.436195 CCAACGCACCGACCCATATG 61.436 60.000 0.00 0.00 0.00 1.78
3649 4669 0.742990 CAACGCACCGACCCATATGT 60.743 55.000 1.24 0.00 0.00 2.29
3650 4670 0.742990 AACGCACCGACCCATATGTG 60.743 55.000 1.24 0.00 0.00 3.21
3651 4671 3.420943 GCACCGACCCATATGTGC 58.579 61.111 1.24 0.00 46.09 4.57
3652 4672 2.186826 GCACCGACCCATATGTGCC 61.187 63.158 1.24 0.00 46.33 5.01
3653 4673 1.887242 CACCGACCCATATGTGCCG 60.887 63.158 1.24 0.00 0.00 5.69
3654 4674 2.280797 CCGACCCATATGTGCCGG 60.281 66.667 0.00 0.00 0.00 6.13
3655 4675 2.972505 CGACCCATATGTGCCGGC 60.973 66.667 22.73 22.73 0.00 6.13
3656 4676 2.510906 GACCCATATGTGCCGGCT 59.489 61.111 29.70 10.43 0.00 5.52
3657 4677 1.893808 GACCCATATGTGCCGGCTG 60.894 63.158 29.70 17.08 0.00 4.85
3658 4678 2.595463 CCCATATGTGCCGGCTGG 60.595 66.667 29.70 25.18 38.77 4.85
3671 4691 4.812814 GCTGGCCGCCTTATTTTG 57.187 55.556 11.61 0.00 0.00 2.44
3672 4692 1.519234 GCTGGCCGCCTTATTTTGC 60.519 57.895 11.61 0.32 0.00 3.68
3673 4693 1.889454 CTGGCCGCCTTATTTTGCA 59.111 52.632 11.61 0.00 0.00 4.08
3674 4694 0.461135 CTGGCCGCCTTATTTTGCAT 59.539 50.000 11.61 0.00 0.00 3.96
3675 4695 0.459489 TGGCCGCCTTATTTTGCATC 59.541 50.000 11.61 0.00 0.00 3.91
3676 4696 0.594796 GGCCGCCTTATTTTGCATCG 60.595 55.000 0.71 0.00 0.00 3.84
3677 4697 0.380378 GCCGCCTTATTTTGCATCGA 59.620 50.000 0.00 0.00 0.00 3.59
3678 4698 1.001378 GCCGCCTTATTTTGCATCGAT 60.001 47.619 0.00 0.00 0.00 3.59
3679 4699 2.653890 CCGCCTTATTTTGCATCGATG 58.346 47.619 21.27 21.27 0.00 3.84
3680 4700 2.290367 CCGCCTTATTTTGCATCGATGA 59.710 45.455 29.20 11.22 0.00 2.92
3681 4701 3.243035 CCGCCTTATTTTGCATCGATGAA 60.243 43.478 29.20 16.94 0.00 2.57
3682 4702 4.539870 CGCCTTATTTTGCATCGATGAAT 58.460 39.130 29.20 20.13 0.00 2.57
3683 4703 4.977963 CGCCTTATTTTGCATCGATGAATT 59.022 37.500 29.20 13.20 0.00 2.17
3684 4704 5.108141 CGCCTTATTTTGCATCGATGAATTG 60.108 40.000 29.20 14.12 0.00 2.32
3685 4705 5.332808 GCCTTATTTTGCATCGATGAATTGC 60.333 40.000 29.20 15.24 36.91 3.56
3686 4706 5.749588 CCTTATTTTGCATCGATGAATTGCA 59.250 36.000 29.20 17.87 44.12 4.08
3687 4707 6.422701 CCTTATTTTGCATCGATGAATTGCAT 59.577 34.615 29.20 13.53 45.04 3.96
3688 4708 7.042321 CCTTATTTTGCATCGATGAATTGCATT 60.042 33.333 29.20 10.78 45.04 3.56
3689 4709 5.705813 TTTTGCATCGATGAATTGCATTC 57.294 34.783 29.20 8.17 45.04 2.67
3709 4729 9.866798 TGCATTCAAACATATTGTTAAATAGCA 57.133 25.926 13.57 13.57 40.14 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.622206 GCCGGATATTGATGGGAGCAATA 60.622 47.826 5.05 0.00 41.06 1.90
82 83 8.458843 GCAGCTGGAGTAGAAAATACAAATTTA 58.541 33.333 17.12 0.00 34.12 1.40
114 115 5.296531 GCAATGTTGATTCAACTTGGGTTTT 59.703 36.000 25.49 5.45 43.85 2.43
152 154 9.884814 AGTTCCTATATTTAGTAGTCTGGACAT 57.115 33.333 3.51 0.00 0.00 3.06
173 175 7.214467 TCATCAATTTACTTTGGACAGTTCC 57.786 36.000 0.00 0.00 43.19 3.62
179 181 8.561738 TCCTACTTCATCAATTTACTTTGGAC 57.438 34.615 0.00 0.00 0.00 4.02
289 291 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
290 292 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
291 293 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
292 294 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
293 295 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
294 296 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
295 297 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
351 353 4.141158 CCACTTATTTATCTCCCCCAAGCT 60.141 45.833 0.00 0.00 0.00 3.74
361 363 7.071824 CCCTTCCTTCTCTCCACTTATTTATCT 59.928 40.741 0.00 0.00 0.00 1.98
432 650 1.421268 AGGCACAACAGTGATTCCTCA 59.579 47.619 0.00 0.00 35.24 3.86
438 656 1.230635 GCGACAGGCACAACAGTGAT 61.231 55.000 0.00 0.00 42.87 3.06
452 692 1.401539 CGTGACTCATCTTCTGCGACA 60.402 52.381 0.00 0.00 0.00 4.35
520 760 1.375326 GCGTCTTTCCCTCCAAGGT 59.625 57.895 0.00 0.00 31.93 3.50
523 763 0.320421 CTTCGCGTCTTTCCCTCCAA 60.320 55.000 5.77 0.00 0.00 3.53
560 800 4.407694 TCGTCGTCGCGATTGCCA 62.408 61.111 14.06 0.00 38.42 4.92
574 814 0.885879 TCGTGACTATGCCAACTCGT 59.114 50.000 0.00 0.00 0.00 4.18
584 824 4.570663 GCGCCGCCTCGTGACTAT 62.571 66.667 0.00 0.00 0.00 2.12
617 865 4.947147 ACCACCGCCGTTGTGCAT 62.947 61.111 0.00 0.00 32.30 3.96
710 961 0.615331 AATGGACAGCGACCTCACAT 59.385 50.000 0.00 0.00 0.00 3.21
794 1045 9.232473 GATGGAGGTCTAGTTGTTTCTATTTTT 57.768 33.333 0.00 0.00 0.00 1.94
798 1049 6.098982 CCAGATGGAGGTCTAGTTGTTTCTAT 59.901 42.308 0.00 0.00 37.39 1.98
832 1083 1.292242 TCAGTTGGAGGCCCTCTCTAT 59.708 52.381 11.29 0.00 42.10 1.98
837 1088 0.978146 TAGCTCAGTTGGAGGCCCTC 60.978 60.000 0.73 0.73 44.22 4.30
839 1090 1.222113 GTAGCTCAGTTGGAGGCCC 59.778 63.158 0.00 0.00 44.22 5.80
852 1103 1.997874 CTTGGCTGGGGAGGTAGCT 60.998 63.158 0.00 0.00 39.80 3.32
860 1111 3.373565 GTTTCGGCTTGGCTGGGG 61.374 66.667 0.00 0.00 35.34 4.96
949 1204 0.906775 TGTTCTGGACGGGGATTACC 59.093 55.000 0.00 0.00 39.11 2.85
951 1206 0.906775 GGTGTTCTGGACGGGGATTA 59.093 55.000 0.00 0.00 0.00 1.75
972 1228 1.589196 CTCTTCGATCCGCGGGTTC 60.589 63.158 27.83 20.97 41.33 3.62
1278 1583 1.893062 CGCATCCTGACTCCTGACA 59.107 57.895 0.00 0.00 0.00 3.58
1362 1667 1.817099 CATTCGTGGCAGCCTCTCC 60.817 63.158 14.15 0.00 0.00 3.71
1499 2215 3.589988 CACATCAGGTGTTACAGGAGAC 58.410 50.000 0.00 0.00 42.75 3.36
1537 2253 6.644181 CAGATATGTAGAATGTCGACAAGCAT 59.356 38.462 24.13 21.09 35.71 3.79
1681 2397 7.451281 AATCAAGATTCGTAACAGTATGACG 57.549 36.000 0.00 0.00 39.69 4.35
1705 2421 1.754803 ACCCAACTTATCTCATCGCGA 59.245 47.619 13.09 13.09 0.00 5.87
1707 2423 2.213499 CCACCCAACTTATCTCATCGC 58.787 52.381 0.00 0.00 0.00 4.58
1726 2442 2.500504 CCAGTCTACAGACCTTTACCCC 59.499 54.545 5.76 0.00 45.85 4.95
1745 2461 1.148273 GGGCGAGTGCAATATCCCA 59.852 57.895 15.81 0.00 45.35 4.37
1773 2494 3.138798 GGACGAGCCCTGTCGCTA 61.139 66.667 0.00 0.00 44.06 4.26
2191 3195 9.959749 AAAACAACCATCGCGAAATATATAAAT 57.040 25.926 15.24 0.00 0.00 1.40
2209 3213 1.728068 AAAACGCCACCAAAACAACC 58.272 45.000 0.00 0.00 0.00 3.77
2331 3335 5.797051 TGTAGTACGGCTTACAAAGGAAAT 58.203 37.500 3.85 0.00 32.41 2.17
2361 3365 4.578871 CGCTATTGGTCATATTGGATGGA 58.421 43.478 0.00 0.00 0.00 3.41
2372 3376 0.464036 AAGGATCGCGCTATTGGTCA 59.536 50.000 5.56 0.00 0.00 4.02
2412 3416 4.012374 CCCACTAGTTGATTCACAGCATT 58.988 43.478 0.00 0.00 32.13 3.56
2477 3488 7.909485 ATGATAAATTCAAAGGCCTGATCTT 57.091 32.000 5.69 0.00 38.03 2.40
2590 3601 7.175641 ACTTTGTGAGGTCCTGAAAATTCATAG 59.824 37.037 0.00 0.00 36.46 2.23
2672 3683 2.497675 GGACTTCACTATGCTGAGGTCA 59.502 50.000 14.96 0.00 44.95 4.02
2748 3759 4.248058 CACTGATCTTGTAGTGTGCATCA 58.752 43.478 0.00 0.00 39.48 3.07
2757 3768 7.201591 GGATCATTTCACACACTGATCTTGTAG 60.202 40.741 10.26 0.00 42.25 2.74
2816 3827 8.584600 GTTACAGATTACAATGTAGAGTGAACG 58.415 37.037 0.00 0.00 33.66 3.95
2860 3877 7.141363 CCGAAAAGAGATTCACAGAACAAAAT 58.859 34.615 0.00 0.00 0.00 1.82
2867 3884 4.507710 CATCCCGAAAAGAGATTCACAGA 58.492 43.478 0.00 0.00 0.00 3.41
2924 3941 3.403038 CAAAAGTGACATCGGAGAAGGT 58.597 45.455 0.00 0.00 43.58 3.50
2981 4000 7.309744 CCCAAGCAAGATTTGGAAGTTATACAA 60.310 37.037 5.62 0.00 46.42 2.41
3058 4077 7.872138 ACCTGGTCTCATATAATTTCTTTCCA 58.128 34.615 0.00 0.00 0.00 3.53
3059 4078 8.214364 AGACCTGGTCTCATATAATTTCTTTCC 58.786 37.037 23.49 0.00 38.71 3.13
3060 4079 9.620259 AAGACCTGGTCTCATATAATTTCTTTC 57.380 33.333 28.46 0.00 42.59 2.62
3063 4082 8.361139 CGTAAGACCTGGTCTCATATAATTTCT 58.639 37.037 28.46 11.55 42.59 2.52
3064 4083 7.599245 CCGTAAGACCTGGTCTCATATAATTTC 59.401 40.741 28.46 8.37 42.59 2.17
3065 4084 7.070821 ACCGTAAGACCTGGTCTCATATAATTT 59.929 37.037 28.46 12.75 42.59 1.82
3066 4085 6.553852 ACCGTAAGACCTGGTCTCATATAATT 59.446 38.462 28.46 13.45 42.59 1.40
3067 4086 6.075984 ACCGTAAGACCTGGTCTCATATAAT 58.924 40.000 28.46 14.16 42.59 1.28
3068 4087 5.452255 ACCGTAAGACCTGGTCTCATATAA 58.548 41.667 28.46 8.51 42.59 0.98
3069 4088 5.057843 ACCGTAAGACCTGGTCTCATATA 57.942 43.478 28.46 14.91 42.59 0.86
3070 4089 3.912248 ACCGTAAGACCTGGTCTCATAT 58.088 45.455 28.46 15.93 42.59 1.78
3071 4090 3.377253 ACCGTAAGACCTGGTCTCATA 57.623 47.619 28.46 15.96 42.59 2.15
3072 4091 2.233305 ACCGTAAGACCTGGTCTCAT 57.767 50.000 28.46 17.00 42.59 2.90
3073 4092 2.005370 AACCGTAAGACCTGGTCTCA 57.995 50.000 28.46 13.27 42.59 3.27
3074 4093 2.159268 GCTAACCGTAAGACCTGGTCTC 60.159 54.545 28.46 16.42 42.59 3.36
3075 4094 1.823610 GCTAACCGTAAGACCTGGTCT 59.176 52.381 23.49 23.49 45.64 3.85
3076 4095 1.547372 TGCTAACCGTAAGACCTGGTC 59.453 52.381 19.20 19.20 43.02 4.02
3077 4096 1.549170 CTGCTAACCGTAAGACCTGGT 59.451 52.381 0.00 0.00 43.02 4.00
3078 4097 1.134788 CCTGCTAACCGTAAGACCTGG 60.135 57.143 0.00 0.00 43.02 4.45
3079 4098 1.549170 ACCTGCTAACCGTAAGACCTG 59.451 52.381 0.00 0.00 43.02 4.00
3080 4099 1.549170 CACCTGCTAACCGTAAGACCT 59.451 52.381 0.00 0.00 43.02 3.85
3081 4100 1.547372 TCACCTGCTAACCGTAAGACC 59.453 52.381 0.00 0.00 43.02 3.85
3082 4101 2.490903 TCTCACCTGCTAACCGTAAGAC 59.509 50.000 0.00 0.00 43.02 3.01
3083 4102 2.490903 GTCTCACCTGCTAACCGTAAGA 59.509 50.000 0.00 0.00 43.02 2.10
3084 4103 2.416972 GGTCTCACCTGCTAACCGTAAG 60.417 54.545 0.00 0.00 34.73 2.34
3085 4104 1.547372 GGTCTCACCTGCTAACCGTAA 59.453 52.381 0.00 0.00 34.73 3.18
3086 4105 1.180029 GGTCTCACCTGCTAACCGTA 58.820 55.000 0.00 0.00 34.73 4.02
3087 4106 1.542187 GGGTCTCACCTGCTAACCGT 61.542 60.000 0.00 0.00 38.64 4.83
3088 4107 1.218316 GGGTCTCACCTGCTAACCG 59.782 63.158 0.00 0.00 38.64 4.44
3089 4108 0.036294 GTGGGTCTCACCTGCTAACC 60.036 60.000 0.00 0.00 40.39 2.85
3090 4109 3.534721 GTGGGTCTCACCTGCTAAC 57.465 57.895 0.00 0.00 40.39 2.34
3098 4117 0.909610 TCCATCAGGGTGGGTCTCAC 60.910 60.000 0.00 0.00 45.34 3.51
3099 4118 0.044702 ATCCATCAGGGTGGGTCTCA 59.955 55.000 0.00 0.00 39.80 3.27
3100 4119 0.471617 CATCCATCAGGGTGGGTCTC 59.528 60.000 0.00 0.00 42.67 3.36
3101 4120 0.044702 TCATCCATCAGGGTGGGTCT 59.955 55.000 0.00 0.00 46.59 3.85
3102 4121 0.181350 GTCATCCATCAGGGTGGGTC 59.819 60.000 0.00 0.00 46.59 4.46
3103 4122 0.549902 TGTCATCCATCAGGGTGGGT 60.550 55.000 0.00 0.00 46.59 4.51
3104 4123 0.107017 GTGTCATCCATCAGGGTGGG 60.107 60.000 0.00 0.00 46.59 4.61
3105 4124 0.462581 CGTGTCATCCATCAGGGTGG 60.463 60.000 0.00 0.00 46.59 4.61
3107 4126 0.250234 CACGTGTCATCCATCAGGGT 59.750 55.000 7.58 0.00 38.11 4.34
3108 4127 0.536724 TCACGTGTCATCCATCAGGG 59.463 55.000 16.51 0.00 34.83 4.45
3109 4128 1.066929 TGTCACGTGTCATCCATCAGG 60.067 52.381 16.51 0.00 0.00 3.86
3110 4129 2.368655 TGTCACGTGTCATCCATCAG 57.631 50.000 16.51 0.00 0.00 2.90
3111 4130 3.261580 GAATGTCACGTGTCATCCATCA 58.738 45.455 24.84 9.40 0.00 3.07
3112 4131 3.261580 TGAATGTCACGTGTCATCCATC 58.738 45.455 24.84 19.34 0.00 3.51
3113 4132 3.333029 TGAATGTCACGTGTCATCCAT 57.667 42.857 24.84 12.42 0.00 3.41
3114 4133 2.829741 TGAATGTCACGTGTCATCCA 57.170 45.000 24.84 18.07 0.00 3.41
3115 4134 5.794687 TTTATGAATGTCACGTGTCATCC 57.205 39.130 24.84 15.73 32.99 3.51
3116 4135 7.239166 AGATTTATGAATGTCACGTGTCATC 57.761 36.000 24.84 18.48 32.99 2.92
3117 4136 7.615582 AAGATTTATGAATGTCACGTGTCAT 57.384 32.000 20.34 20.34 35.05 3.06
3118 4137 8.541133 TTAAGATTTATGAATGTCACGTGTCA 57.459 30.769 17.50 17.50 0.00 3.58
3119 4138 9.820229 TTTTAAGATTTATGAATGTCACGTGTC 57.180 29.630 16.51 10.98 0.00 3.67
3120 4139 9.607285 GTTTTAAGATTTATGAATGTCACGTGT 57.393 29.630 16.51 0.00 0.00 4.49
3121 4140 9.605955 TGTTTTAAGATTTATGAATGTCACGTG 57.394 29.630 9.94 9.94 0.00 4.49
3138 4157 9.672673 CAGGGAGAGAAATTAGATGTTTTAAGA 57.327 33.333 0.00 0.00 0.00 2.10
3139 4158 9.672673 TCAGGGAGAGAAATTAGATGTTTTAAG 57.327 33.333 0.00 0.00 0.00 1.85
3142 4161 9.539194 AAATCAGGGAGAGAAATTAGATGTTTT 57.461 29.630 0.00 0.00 0.00 2.43
3143 4162 9.539194 AAAATCAGGGAGAGAAATTAGATGTTT 57.461 29.630 0.00 0.00 0.00 2.83
3151 4170 9.467796 CCTTACTTAAAATCAGGGAGAGAAATT 57.532 33.333 0.00 0.00 0.00 1.82
3152 4171 8.055790 CCCTTACTTAAAATCAGGGAGAGAAAT 58.944 37.037 0.00 0.00 46.61 2.17
3153 4172 7.402862 CCCTTACTTAAAATCAGGGAGAGAAA 58.597 38.462 0.00 0.00 46.61 2.52
3154 4173 6.069615 CCCCTTACTTAAAATCAGGGAGAGAA 60.070 42.308 3.98 0.00 46.61 2.87
3155 4174 5.428783 CCCCTTACTTAAAATCAGGGAGAGA 59.571 44.000 3.98 0.00 46.61 3.10
3156 4175 5.191921 ACCCCTTACTTAAAATCAGGGAGAG 59.808 44.000 3.98 0.00 46.61 3.20
3157 4176 5.045140 CACCCCTTACTTAAAATCAGGGAGA 60.045 44.000 3.98 0.00 46.61 3.71
3158 4177 5.193679 CACCCCTTACTTAAAATCAGGGAG 58.806 45.833 3.98 0.00 46.61 4.30
3159 4178 4.017867 CCACCCCTTACTTAAAATCAGGGA 60.018 45.833 3.98 0.00 46.61 4.20
3160 4179 4.278310 CCACCCCTTACTTAAAATCAGGG 58.722 47.826 0.00 0.00 43.66 4.45
3161 4180 4.278310 CCCACCCCTTACTTAAAATCAGG 58.722 47.826 0.00 0.00 0.00 3.86
3162 4181 4.264217 ACCCCACCCCTTACTTAAAATCAG 60.264 45.833 0.00 0.00 0.00 2.90
3163 4182 3.663632 ACCCCACCCCTTACTTAAAATCA 59.336 43.478 0.00 0.00 0.00 2.57
3164 4183 4.326600 ACCCCACCCCTTACTTAAAATC 57.673 45.455 0.00 0.00 0.00 2.17
3165 4184 5.882076 TTACCCCACCCCTTACTTAAAAT 57.118 39.130 0.00 0.00 0.00 1.82
3166 4185 5.676470 TTTACCCCACCCCTTACTTAAAA 57.324 39.130 0.00 0.00 0.00 1.52
3167 4186 5.076179 ACATTTACCCCACCCCTTACTTAAA 59.924 40.000 0.00 0.00 0.00 1.52
3168 4187 4.607141 ACATTTACCCCACCCCTTACTTAA 59.393 41.667 0.00 0.00 0.00 1.85
3169 4188 4.185518 ACATTTACCCCACCCCTTACTTA 58.814 43.478 0.00 0.00 0.00 2.24
3170 4189 2.998186 ACATTTACCCCACCCCTTACTT 59.002 45.455 0.00 0.00 0.00 2.24
3171 4190 2.651190 ACATTTACCCCACCCCTTACT 58.349 47.619 0.00 0.00 0.00 2.24
3172 4191 3.461378 AACATTTACCCCACCCCTTAC 57.539 47.619 0.00 0.00 0.00 2.34
3173 4192 4.161102 CAAAACATTTACCCCACCCCTTA 58.839 43.478 0.00 0.00 0.00 2.69
3174 4193 2.976185 CAAAACATTTACCCCACCCCTT 59.024 45.455 0.00 0.00 0.00 3.95
3175 4194 2.090437 ACAAAACATTTACCCCACCCCT 60.090 45.455 0.00 0.00 0.00 4.79
3176 4195 2.037902 CACAAAACATTTACCCCACCCC 59.962 50.000 0.00 0.00 0.00 4.95
3177 4196 2.966516 TCACAAAACATTTACCCCACCC 59.033 45.455 0.00 0.00 0.00 4.61
3178 4197 4.882842 ATCACAAAACATTTACCCCACC 57.117 40.909 0.00 0.00 0.00 4.61
3179 4198 6.052360 ACAAATCACAAAACATTTACCCCAC 58.948 36.000 0.00 0.00 0.00 4.61
3180 4199 6.240549 ACAAATCACAAAACATTTACCCCA 57.759 33.333 0.00 0.00 0.00 4.96
3181 4200 8.664211 TTTACAAATCACAAAACATTTACCCC 57.336 30.769 0.00 0.00 0.00 4.95
3183 4202 9.592720 GCATTTACAAATCACAAAACATTTACC 57.407 29.630 0.00 0.00 0.00 2.85
3184 4203 9.592720 GGCATTTACAAATCACAAAACATTTAC 57.407 29.630 0.00 0.00 0.00 2.01
3185 4204 9.330063 TGGCATTTACAAATCACAAAACATTTA 57.670 25.926 0.00 0.00 0.00 1.40
3186 4205 8.127954 GTGGCATTTACAAATCACAAAACATTT 58.872 29.630 0.00 0.00 0.00 2.32
3187 4206 7.518052 CGTGGCATTTACAAATCACAAAACATT 60.518 33.333 0.00 0.00 0.00 2.71
3188 4207 6.073873 CGTGGCATTTACAAATCACAAAACAT 60.074 34.615 0.00 0.00 0.00 2.71
3189 4208 5.233050 CGTGGCATTTACAAATCACAAAACA 59.767 36.000 0.00 0.00 0.00 2.83
3190 4209 5.233263 ACGTGGCATTTACAAATCACAAAAC 59.767 36.000 0.00 0.00 0.00 2.43
3191 4210 5.233050 CACGTGGCATTTACAAATCACAAAA 59.767 36.000 7.95 0.00 0.00 2.44
3192 4211 4.742167 CACGTGGCATTTACAAATCACAAA 59.258 37.500 7.95 0.00 0.00 2.83
3193 4212 4.202060 ACACGTGGCATTTACAAATCACAA 60.202 37.500 21.57 0.00 0.00 3.33
3194 4213 3.316588 ACACGTGGCATTTACAAATCACA 59.683 39.130 21.57 0.00 0.00 3.58
3195 4214 3.896122 ACACGTGGCATTTACAAATCAC 58.104 40.909 21.57 0.00 0.00 3.06
3196 4215 3.565902 TGACACGTGGCATTTACAAATCA 59.434 39.130 23.03 6.48 0.00 2.57
3197 4216 4.153958 TGACACGTGGCATTTACAAATC 57.846 40.909 23.03 3.54 0.00 2.17
3198 4217 4.782019 ATGACACGTGGCATTTACAAAT 57.218 36.364 31.22 7.66 42.08 2.32
3207 4226 1.001860 TCTGATGAATGACACGTGGCA 59.998 47.619 29.28 29.28 37.54 4.92
3208 4227 1.725641 TCTGATGAATGACACGTGGC 58.274 50.000 21.57 19.24 0.00 5.01
3218 4237 2.804572 CGCGAGACCCATTCTGATGAAT 60.805 50.000 0.00 0.00 43.10 2.57
3219 4238 1.471501 CGCGAGACCCATTCTGATGAA 60.472 52.381 0.00 0.00 33.22 2.57
3220 4239 0.103026 CGCGAGACCCATTCTGATGA 59.897 55.000 0.00 0.00 33.22 2.92
3221 4240 0.179100 ACGCGAGACCCATTCTGATG 60.179 55.000 15.93 0.00 33.22 3.07
3222 4241 0.179100 CACGCGAGACCCATTCTGAT 60.179 55.000 15.93 0.00 33.22 2.90
3223 4242 1.215382 CACGCGAGACCCATTCTGA 59.785 57.895 15.93 0.00 33.22 3.27
3224 4243 0.803768 CTCACGCGAGACCCATTCTG 60.804 60.000 15.93 0.00 42.34 3.02
3225 4244 0.965866 TCTCACGCGAGACCCATTCT 60.966 55.000 15.93 0.00 43.55 2.40
3226 4245 1.511305 TCTCACGCGAGACCCATTC 59.489 57.895 15.93 0.00 43.55 2.67
3227 4246 3.694746 TCTCACGCGAGACCCATT 58.305 55.556 15.93 0.00 43.55 3.16
3233 4252 0.387929 AAACCAAGTCTCACGCGAGA 59.612 50.000 15.93 10.37 46.28 4.04
3234 4253 0.784778 GAAACCAAGTCTCACGCGAG 59.215 55.000 15.93 4.59 40.98 5.03
3235 4254 0.103390 TGAAACCAAGTCTCACGCGA 59.897 50.000 15.93 0.00 0.00 5.87
3236 4255 1.148310 ATGAAACCAAGTCTCACGCG 58.852 50.000 3.53 3.53 0.00 6.01
3237 4256 4.742438 TTTATGAAACCAAGTCTCACGC 57.258 40.909 0.00 0.00 0.00 5.34
3238 4257 7.584987 AGAATTTTATGAAACCAAGTCTCACG 58.415 34.615 0.00 0.00 0.00 4.35
3239 4258 9.750125 AAAGAATTTTATGAAACCAAGTCTCAC 57.250 29.630 0.00 0.00 31.62 3.51
3257 4276 5.845391 TGTCTTTGGTCGGAAAAGAATTT 57.155 34.783 6.47 0.00 43.37 1.82
3258 4277 5.770162 AGATGTCTTTGGTCGGAAAAGAATT 59.230 36.000 6.47 0.00 43.37 2.17
3259 4278 5.182001 CAGATGTCTTTGGTCGGAAAAGAAT 59.818 40.000 6.47 4.11 43.37 2.40
3260 4279 4.515191 CAGATGTCTTTGGTCGGAAAAGAA 59.485 41.667 6.47 0.35 43.37 2.52
3261 4280 4.065088 CAGATGTCTTTGGTCGGAAAAGA 58.935 43.478 1.65 1.65 40.46 2.52
3262 4281 3.365364 GCAGATGTCTTTGGTCGGAAAAG 60.365 47.826 0.00 0.00 36.22 2.27
3263 4282 2.552315 GCAGATGTCTTTGGTCGGAAAA 59.448 45.455 0.00 0.00 0.00 2.29
3264 4283 2.151202 GCAGATGTCTTTGGTCGGAAA 58.849 47.619 0.00 0.00 0.00 3.13
3265 4284 1.071542 TGCAGATGTCTTTGGTCGGAA 59.928 47.619 0.00 0.00 0.00 4.30
3266 4285 0.684535 TGCAGATGTCTTTGGTCGGA 59.315 50.000 0.00 0.00 0.00 4.55
3267 4286 1.667724 GATGCAGATGTCTTTGGTCGG 59.332 52.381 0.00 0.00 0.00 4.79
3268 4287 2.094894 GTGATGCAGATGTCTTTGGTCG 59.905 50.000 0.00 0.00 0.00 4.79
3269 4288 3.126514 CAGTGATGCAGATGTCTTTGGTC 59.873 47.826 0.00 0.00 0.00 4.02
3270 4289 3.079578 CAGTGATGCAGATGTCTTTGGT 58.920 45.455 0.00 0.00 0.00 3.67
3271 4290 2.159421 GCAGTGATGCAGATGTCTTTGG 60.159 50.000 0.00 0.00 34.41 3.28
3272 4291 2.747989 AGCAGTGATGCAGATGTCTTTG 59.252 45.455 2.73 0.00 37.25 2.77
3273 4292 2.747989 CAGCAGTGATGCAGATGTCTTT 59.252 45.455 0.00 0.00 37.25 2.52
3274 4293 2.357075 CAGCAGTGATGCAGATGTCTT 58.643 47.619 0.00 0.00 37.25 3.01
3275 4294 1.407025 CCAGCAGTGATGCAGATGTCT 60.407 52.381 1.91 0.00 37.25 3.41
3276 4295 1.015109 CCAGCAGTGATGCAGATGTC 58.985 55.000 1.91 0.00 37.25 3.06
3288 4307 0.820891 CAAGGCAGTGAACCAGCAGT 60.821 55.000 0.00 0.00 0.00 4.40
3294 4313 0.033504 TCGTCTCAAGGCAGTGAACC 59.966 55.000 0.00 0.00 0.00 3.62
3296 4315 2.300152 AGAATCGTCTCAAGGCAGTGAA 59.700 45.455 0.00 0.00 0.00 3.18
3306 4325 4.437524 CGACTCAGCTTAAGAATCGTCTCA 60.438 45.833 6.67 0.00 30.70 3.27
3307 4326 4.032355 CGACTCAGCTTAAGAATCGTCTC 58.968 47.826 6.67 0.00 30.70 3.36
3308 4327 3.732471 GCGACTCAGCTTAAGAATCGTCT 60.732 47.826 6.67 0.00 34.72 4.18
3309 4328 2.532317 GCGACTCAGCTTAAGAATCGTC 59.468 50.000 6.67 6.07 0.00 4.20
3310 4329 2.531206 GCGACTCAGCTTAAGAATCGT 58.469 47.619 6.67 0.00 0.00 3.73
3311 4330 1.855360 GGCGACTCAGCTTAAGAATCG 59.145 52.381 6.67 8.08 37.29 3.34
3312 4331 2.159028 AGGGCGACTCAGCTTAAGAATC 60.159 50.000 6.67 0.00 37.29 2.52
3313 4332 1.834263 AGGGCGACTCAGCTTAAGAAT 59.166 47.619 6.67 0.00 37.29 2.40
3314 4333 1.267121 AGGGCGACTCAGCTTAAGAA 58.733 50.000 6.67 0.00 37.29 2.52
3315 4334 1.066858 CAAGGGCGACTCAGCTTAAGA 60.067 52.381 6.67 0.00 37.29 2.10
3316 4335 1.363744 CAAGGGCGACTCAGCTTAAG 58.636 55.000 0.00 0.00 37.29 1.85
3317 4336 0.673644 GCAAGGGCGACTCAGCTTAA 60.674 55.000 0.00 0.00 37.29 1.85
3318 4337 1.079127 GCAAGGGCGACTCAGCTTA 60.079 57.895 0.00 0.00 37.29 3.09
3319 4338 2.359230 GCAAGGGCGACTCAGCTT 60.359 61.111 0.00 0.00 37.29 3.74
3329 4348 1.253593 CCAAGGAGGAAAGCAAGGGC 61.254 60.000 0.00 0.00 41.22 5.19
3330 4349 1.253593 GCCAAGGAGGAAAGCAAGGG 61.254 60.000 0.00 0.00 41.22 3.95
3331 4350 0.251519 AGCCAAGGAGGAAAGCAAGG 60.252 55.000 0.00 0.00 41.22 3.61
3332 4351 1.172175 GAGCCAAGGAGGAAAGCAAG 58.828 55.000 0.00 0.00 41.22 4.01
3333 4352 0.251341 GGAGCCAAGGAGGAAAGCAA 60.251 55.000 0.00 0.00 41.22 3.91
3334 4353 1.136329 AGGAGCCAAGGAGGAAAGCA 61.136 55.000 0.00 0.00 41.22 3.91
3335 4354 0.038890 AAGGAGCCAAGGAGGAAAGC 59.961 55.000 0.00 0.00 41.22 3.51
3336 4355 1.677217 CGAAGGAGCCAAGGAGGAAAG 60.677 57.143 0.00 0.00 41.22 2.62
3337 4356 0.324943 CGAAGGAGCCAAGGAGGAAA 59.675 55.000 0.00 0.00 41.22 3.13
3338 4357 1.983224 CGAAGGAGCCAAGGAGGAA 59.017 57.895 0.00 0.00 41.22 3.36
3339 4358 3.713650 CGAAGGAGCCAAGGAGGA 58.286 61.111 0.00 0.00 41.22 3.71
3356 4375 1.272769 ACGACTACAAGCTCTTGGACC 59.727 52.381 13.48 0.00 44.45 4.46
3366 4385 5.236911 GGGAGAGTACTGATACGACTACAAG 59.763 48.000 0.00 0.00 36.33 3.16
3371 4390 3.811083 CAGGGAGAGTACTGATACGACT 58.189 50.000 0.00 0.00 36.86 4.18
3380 4399 0.545309 TTGGCTGCAGGGAGAGTACT 60.545 55.000 17.12 0.00 0.00 2.73
3406 4425 2.576053 CGATGACCGGACGACACG 60.576 66.667 9.46 2.84 33.91 4.49
3411 4430 0.736325 AGAAAAGCGATGACCGGACG 60.736 55.000 9.46 9.61 39.04 4.79
3422 4441 0.455633 GCTCATGGTGCAGAAAAGCG 60.456 55.000 6.72 0.00 37.31 4.68
3479 4499 1.065199 TCGCCTCATTGGAATTGCTCT 60.065 47.619 0.00 0.00 38.35 4.09
3480 4500 1.382522 TCGCCTCATTGGAATTGCTC 58.617 50.000 0.00 0.00 38.35 4.26
3481 4501 1.952296 GATCGCCTCATTGGAATTGCT 59.048 47.619 0.00 0.00 38.35 3.91
3482 4502 1.334419 CGATCGCCTCATTGGAATTGC 60.334 52.381 0.26 0.00 38.35 3.56
3483 4503 1.942657 ACGATCGCCTCATTGGAATTG 59.057 47.619 16.60 0.00 38.35 2.32
3484 4504 2.213499 GACGATCGCCTCATTGGAATT 58.787 47.619 16.60 0.00 38.35 2.17
3485 4505 1.869754 CGACGATCGCCTCATTGGAAT 60.870 52.381 16.60 0.00 38.35 3.01
3486 4506 0.527600 CGACGATCGCCTCATTGGAA 60.528 55.000 16.60 0.00 38.35 3.53
3487 4507 1.065764 CGACGATCGCCTCATTGGA 59.934 57.895 16.60 0.00 38.35 3.53
3488 4508 1.209275 GACGACGATCGCCTCATTGG 61.209 60.000 16.60 0.00 45.12 3.16
3489 4509 1.209275 GGACGACGATCGCCTCATTG 61.209 60.000 16.60 1.35 45.12 2.82
3490 4510 1.065928 GGACGACGATCGCCTCATT 59.934 57.895 16.60 0.00 45.12 2.57
3491 4511 1.456196 ATGGACGACGATCGCCTCAT 61.456 55.000 16.60 9.33 45.12 2.90
3492 4512 1.663379 AATGGACGACGATCGCCTCA 61.663 55.000 16.60 7.32 45.12 3.86
3493 4513 0.527817 AAATGGACGACGATCGCCTC 60.528 55.000 16.60 5.25 45.12 4.70
3494 4514 0.108329 AAAATGGACGACGATCGCCT 60.108 50.000 16.60 0.00 45.12 5.52
3495 4515 0.725117 AAAAATGGACGACGATCGCC 59.275 50.000 16.60 8.87 45.12 5.54
3511 4531 6.548441 ACGTCCGATTCAAACAGATAAAAA 57.452 33.333 0.00 0.00 0.00 1.94
3512 4532 5.164031 CGACGTCCGATTCAAACAGATAAAA 60.164 40.000 10.58 0.00 41.76 1.52
3513 4533 4.325204 CGACGTCCGATTCAAACAGATAAA 59.675 41.667 10.58 0.00 41.76 1.40
3514 4534 3.855379 CGACGTCCGATTCAAACAGATAA 59.145 43.478 10.58 0.00 41.76 1.75
3515 4535 3.431856 CGACGTCCGATTCAAACAGATA 58.568 45.455 10.58 0.00 41.76 1.98
3516 4536 2.259618 CGACGTCCGATTCAAACAGAT 58.740 47.619 10.58 0.00 41.76 2.90
3517 4537 1.667756 CCGACGTCCGATTCAAACAGA 60.668 52.381 10.58 0.00 41.76 3.41
3518 4538 0.713883 CCGACGTCCGATTCAAACAG 59.286 55.000 10.58 0.00 41.76 3.16
3519 4539 0.314618 TCCGACGTCCGATTCAAACA 59.685 50.000 10.58 0.00 41.76 2.83
3520 4540 0.712222 GTCCGACGTCCGATTCAAAC 59.288 55.000 10.58 0.00 41.76 2.93
3521 4541 0.388907 GGTCCGACGTCCGATTCAAA 60.389 55.000 10.58 0.00 41.76 2.69
3522 4542 1.213537 GGTCCGACGTCCGATTCAA 59.786 57.895 10.58 0.00 41.76 2.69
3523 4543 2.703798 GGGTCCGACGTCCGATTCA 61.704 63.158 10.58 0.00 41.76 2.57
3524 4544 2.103736 GGGTCCGACGTCCGATTC 59.896 66.667 10.58 5.91 41.76 2.52
3525 4545 3.818787 CGGGTCCGACGTCCGATT 61.819 66.667 10.58 0.00 45.96 3.34
3526 4546 4.783621 TCGGGTCCGACGTCCGAT 62.784 66.667 10.58 0.00 46.48 4.18
3535 4555 4.807039 AAATCGCCGTCGGGTCCG 62.807 66.667 14.38 8.46 41.35 4.79
3536 4556 2.889018 GAAATCGCCGTCGGGTCC 60.889 66.667 14.38 0.00 36.13 4.46
3537 4557 1.488261 GATGAAATCGCCGTCGGGTC 61.488 60.000 14.38 0.00 31.13 4.46
3538 4558 1.520787 GATGAAATCGCCGTCGGGT 60.521 57.895 14.38 0.00 31.13 5.28
3539 4559 2.244651 GGATGAAATCGCCGTCGGG 61.245 63.158 14.38 3.27 46.86 5.14
3540 4560 2.585869 CGGATGAAATCGCCGTCGG 61.586 63.158 6.99 6.99 46.86 4.79
3541 4561 2.920869 CGGATGAAATCGCCGTCG 59.079 61.111 0.00 0.00 46.86 5.12
3544 4564 2.256445 AAAAACGGATGAAATCGCCG 57.744 45.000 11.45 11.45 46.86 6.46
3561 4581 3.065095 CGACCAACCCAAACGAGTAAAAA 59.935 43.478 0.00 0.00 0.00 1.94
3562 4582 2.613133 CGACCAACCCAAACGAGTAAAA 59.387 45.455 0.00 0.00 0.00 1.52
3563 4583 2.211806 CGACCAACCCAAACGAGTAAA 58.788 47.619 0.00 0.00 0.00 2.01
3564 4584 1.868469 CGACCAACCCAAACGAGTAA 58.132 50.000 0.00 0.00 0.00 2.24
3565 4585 0.600782 GCGACCAACCCAAACGAGTA 60.601 55.000 0.00 0.00 0.00 2.59
3566 4586 1.890510 GCGACCAACCCAAACGAGT 60.891 57.895 0.00 0.00 0.00 4.18
3567 4587 2.613506 GGCGACCAACCCAAACGAG 61.614 63.158 0.00 0.00 0.00 4.18
3568 4588 2.592287 GGCGACCAACCCAAACGA 60.592 61.111 0.00 0.00 0.00 3.85
3592 4612 0.889306 ATCTAAGATAGGGCGGACGC 59.111 55.000 8.39 8.39 41.06 5.19
3593 4613 3.066900 CCATATCTAAGATAGGGCGGACG 59.933 52.174 0.00 0.00 0.00 4.79
3594 4614 3.385111 CCCATATCTAAGATAGGGCGGAC 59.615 52.174 0.00 0.00 0.00 4.79
3595 4615 3.012502 ACCCATATCTAAGATAGGGCGGA 59.987 47.826 7.31 0.00 39.97 5.54
3596 4616 3.375699 ACCCATATCTAAGATAGGGCGG 58.624 50.000 7.31 0.00 39.97 6.13
3597 4617 3.066900 CGACCCATATCTAAGATAGGGCG 59.933 52.174 7.31 2.19 39.97 6.13
3598 4618 4.098196 GTCGACCCATATCTAAGATAGGGC 59.902 50.000 3.51 0.00 39.97 5.19
3599 4619 5.262009 TGTCGACCCATATCTAAGATAGGG 58.738 45.833 14.12 6.00 42.07 3.53
3600 4620 5.163602 GCTGTCGACCCATATCTAAGATAGG 60.164 48.000 14.12 0.00 0.00 2.57
3601 4621 5.416013 TGCTGTCGACCCATATCTAAGATAG 59.584 44.000 14.12 0.00 0.00 2.08
3602 4622 5.183331 GTGCTGTCGACCCATATCTAAGATA 59.817 44.000 14.12 0.00 0.00 1.98
3603 4623 4.021894 GTGCTGTCGACCCATATCTAAGAT 60.022 45.833 14.12 0.00 0.00 2.40
3604 4624 3.318275 GTGCTGTCGACCCATATCTAAGA 59.682 47.826 14.12 0.00 0.00 2.10
3605 4625 3.643763 GTGCTGTCGACCCATATCTAAG 58.356 50.000 14.12 0.99 0.00 2.18
3606 4626 2.034179 CGTGCTGTCGACCCATATCTAA 59.966 50.000 14.12 0.00 0.00 2.10
3607 4627 1.607148 CGTGCTGTCGACCCATATCTA 59.393 52.381 14.12 0.00 0.00 1.98
3608 4628 0.385751 CGTGCTGTCGACCCATATCT 59.614 55.000 14.12 0.00 0.00 1.98
3609 4629 1.215655 GCGTGCTGTCGACCCATATC 61.216 60.000 14.12 0.00 0.00 1.63
3610 4630 1.227263 GCGTGCTGTCGACCCATAT 60.227 57.895 14.12 0.00 0.00 1.78
3611 4631 2.183300 GCGTGCTGTCGACCCATA 59.817 61.111 14.12 0.00 0.00 2.74
3612 4632 4.760047 GGCGTGCTGTCGACCCAT 62.760 66.667 14.12 0.00 32.06 4.00
3616 4636 3.712881 GTTGGGCGTGCTGTCGAC 61.713 66.667 9.11 9.11 38.22 4.20
3628 4648 2.602746 ATATGGGTCGGTGCGTTGGG 62.603 60.000 0.00 0.00 0.00 4.12
3629 4649 1.153249 ATATGGGTCGGTGCGTTGG 60.153 57.895 0.00 0.00 0.00 3.77
3630 4650 0.742990 ACATATGGGTCGGTGCGTTG 60.743 55.000 7.80 0.00 0.00 4.10
3631 4651 0.742990 CACATATGGGTCGGTGCGTT 60.743 55.000 7.80 0.00 0.00 4.84
3632 4652 1.153449 CACATATGGGTCGGTGCGT 60.153 57.895 7.80 0.00 0.00 5.24
3633 4653 2.534019 GCACATATGGGTCGGTGCG 61.534 63.158 6.86 0.00 45.84 5.34
3635 4655 1.887242 CGGCACATATGGGTCGGTG 60.887 63.158 24.11 4.23 43.82 4.94
3636 4656 2.504032 CGGCACATATGGGTCGGT 59.496 61.111 24.11 0.00 43.82 4.69
3639 4659 1.893808 CAGCCGGCACATATGGGTC 60.894 63.158 31.54 2.41 0.00 4.46
3640 4660 2.192979 CAGCCGGCACATATGGGT 59.807 61.111 31.54 0.00 0.00 4.51
3641 4661 2.595463 CCAGCCGGCACATATGGG 60.595 66.667 31.54 13.71 0.00 4.00
3655 4675 0.461135 ATGCAAAATAAGGCGGCCAG 59.539 50.000 23.09 2.80 0.00 4.85
3656 4676 0.459489 GATGCAAAATAAGGCGGCCA 59.541 50.000 23.09 0.60 0.00 5.36
3657 4677 0.594796 CGATGCAAAATAAGGCGGCC 60.595 55.000 12.11 12.11 0.00 6.13
3658 4678 0.380378 TCGATGCAAAATAAGGCGGC 59.620 50.000 0.00 0.00 0.00 6.53
3659 4679 2.290367 TCATCGATGCAAAATAAGGCGG 59.710 45.455 20.81 0.00 0.00 6.13
3660 4680 3.607422 TCATCGATGCAAAATAAGGCG 57.393 42.857 20.81 0.00 0.00 5.52
3661 4681 5.332808 GCAATTCATCGATGCAAAATAAGGC 60.333 40.000 20.81 14.37 39.81 4.35
3662 4682 5.749588 TGCAATTCATCGATGCAAAATAAGG 59.250 36.000 20.81 9.46 46.23 2.69
3663 4683 6.815672 TGCAATTCATCGATGCAAAATAAG 57.184 33.333 20.81 11.82 46.23 1.73
3683 4703 9.866798 TGCTATTTAACAATATGTTTGAATGCA 57.133 25.926 0.54 10.76 41.45 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.