Multiple sequence alignment - TraesCS3A01G172100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G172100 chr3A 100.000 3273 0 0 1 3273 186752612 186749340 0.000000e+00 6045.0
1 TraesCS3A01G172100 chr3A 95.341 279 13 0 220 498 186757502 186757224 8.330000e-121 444.0
2 TraesCS3A01G172100 chr3A 84.444 90 14 0 170 259 739877874 739877963 4.500000e-14 89.8
3 TraesCS3A01G172100 chr3D 96.673 1683 30 15 494 2170 160562850 160561188 0.000000e+00 2774.0
4 TraesCS3A01G172100 chr3D 96.661 1138 10 5 2162 3273 160561128 160559993 0.000000e+00 1866.0
5 TraesCS3A01G172100 chr3B 94.454 1154 22 20 2157 3273 237110866 237109718 0.000000e+00 1738.0
6 TraesCS3A01G172100 chr3B 89.425 1182 43 35 1053 2161 237112095 237110923 0.000000e+00 1415.0
7 TraesCS3A01G172100 chr3B 91.939 521 14 10 494 1000 237112605 237112099 0.000000e+00 704.0
8 TraesCS3A01G172100 chr5A 94.143 461 19 5 37 494 380360713 380361168 0.000000e+00 695.0
9 TraesCS3A01G172100 chr5A 89.860 286 20 2 217 498 380338788 380339068 3.110000e-95 359.0
10 TraesCS3A01G172100 chr6B 88.069 461 50 4 37 493 336420045 336420504 2.870000e-150 542.0
11 TraesCS3A01G172100 chr6B 87.770 278 29 5 220 493 336415105 336415381 1.470000e-83 320.0
12 TraesCS3A01G172100 chr6B 87.727 220 19 8 272 485 39294076 39293859 1.950000e-62 250.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G172100 chr3A 186749340 186752612 3272 True 6045.000000 6045 100.000000 1 3273 1 chr3A.!!$R1 3272
1 TraesCS3A01G172100 chr3D 160559993 160562850 2857 True 2320.000000 2774 96.667000 494 3273 2 chr3D.!!$R1 2779
2 TraesCS3A01G172100 chr3B 237109718 237112605 2887 True 1285.666667 1738 91.939333 494 3273 3 chr3B.!!$R1 2779

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.034670 GCCACTCCAGCCAGAATCTT 60.035 55.0 0.00 0.0 0.0 2.40 F
100 101 0.105964 CAAGACAACTCCACGGGTGA 59.894 55.0 0.00 0.0 0.0 4.02 F
325 326 0.106894 GGAGGGAATTCTAGGCACGG 59.893 60.0 5.23 0.0 0.0 4.94 F
1087 1111 0.040058 ATCTGCAGGTGAATTGGGCA 59.960 50.0 15.13 0.0 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1014 1035 1.070615 GCAGCTAGGCTAGGCTTCC 59.929 63.158 25.37 15.11 36.40 3.46 R
1028 1049 2.183046 GACCTCACTCCTCGCAGC 59.817 66.667 0.00 0.00 0.00 5.25 R
1315 1339 4.025401 CAAGGCCGCGTGTTGGTC 62.025 66.667 4.92 0.00 0.00 4.02 R
2403 2605 0.950836 TGCAGTTTGTCCGAACATGG 59.049 50.000 0.00 0.00 34.73 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.262915 GAGGTGGAGCCAGACACG 59.737 66.667 0.00 0.00 40.61 4.49
18 19 2.203640 AGGTGGAGCCAGACACGA 60.204 61.111 0.00 0.00 40.61 4.35
19 20 2.048127 GGTGGAGCCAGACACGAC 60.048 66.667 0.00 0.00 38.46 4.34
20 21 2.574955 GGTGGAGCCAGACACGACT 61.575 63.158 0.00 0.00 38.46 4.18
21 22 1.373497 GTGGAGCCAGACACGACTG 60.373 63.158 0.00 0.00 37.61 3.51
22 23 2.433318 GGAGCCAGACACGACTGC 60.433 66.667 0.00 0.00 36.67 4.40
23 24 2.340078 GAGCCAGACACGACTGCA 59.660 61.111 0.00 0.00 36.67 4.41
24 25 2.024319 GAGCCAGACACGACTGCAC 61.024 63.158 0.00 0.00 36.67 4.57
25 26 3.044305 GCCAGACACGACTGCACC 61.044 66.667 0.00 0.00 36.67 5.01
26 27 2.421314 CCAGACACGACTGCACCA 59.579 61.111 0.00 0.00 36.67 4.17
27 28 1.665916 CCAGACACGACTGCACCAG 60.666 63.158 0.00 0.00 36.67 4.00
28 29 2.029666 AGACACGACTGCACCAGC 59.970 61.111 0.00 0.00 42.57 4.85
29 30 2.029666 GACACGACTGCACCAGCT 59.970 61.111 0.00 0.00 42.74 4.24
30 31 2.024319 GACACGACTGCACCAGCTC 61.024 63.158 0.00 0.00 42.74 4.09
31 32 2.740055 CACGACTGCACCAGCTCC 60.740 66.667 0.00 0.00 42.74 4.70
32 33 3.233980 ACGACTGCACCAGCTCCA 61.234 61.111 0.00 0.00 42.74 3.86
33 34 2.740055 CGACTGCACCAGCTCCAC 60.740 66.667 0.00 0.00 42.74 4.02
34 35 2.740055 GACTGCACCAGCTCCACG 60.740 66.667 0.00 0.00 42.74 4.94
35 36 4.996434 ACTGCACCAGCTCCACGC 62.996 66.667 0.00 0.00 42.74 5.34
39 40 4.320456 CACCAGCTCCACGCCACT 62.320 66.667 0.00 0.00 40.39 4.00
40 41 4.008933 ACCAGCTCCACGCCACTC 62.009 66.667 0.00 0.00 40.39 3.51
41 42 4.767255 CCAGCTCCACGCCACTCC 62.767 72.222 0.00 0.00 40.39 3.85
42 43 4.007644 CAGCTCCACGCCACTCCA 62.008 66.667 0.00 0.00 40.39 3.86
43 44 3.699894 AGCTCCACGCCACTCCAG 61.700 66.667 0.00 0.00 40.39 3.86
45 46 4.767255 CTCCACGCCACTCCAGCC 62.767 72.222 0.00 0.00 0.00 4.85
48 49 4.007644 CACGCCACTCCAGCCAGA 62.008 66.667 0.00 0.00 0.00 3.86
49 50 3.241530 ACGCCACTCCAGCCAGAA 61.242 61.111 0.00 0.00 0.00 3.02
50 51 2.270205 CGCCACTCCAGCCAGAAT 59.730 61.111 0.00 0.00 0.00 2.40
51 52 1.817099 CGCCACTCCAGCCAGAATC 60.817 63.158 0.00 0.00 0.00 2.52
52 53 1.606531 GCCACTCCAGCCAGAATCT 59.393 57.895 0.00 0.00 0.00 2.40
53 54 0.034670 GCCACTCCAGCCAGAATCTT 60.035 55.000 0.00 0.00 0.00 2.40
54 55 1.747709 CCACTCCAGCCAGAATCTTG 58.252 55.000 0.00 0.00 0.00 3.02
55 56 1.093159 CACTCCAGCCAGAATCTTGC 58.907 55.000 0.00 0.00 0.00 4.01
56 57 0.694771 ACTCCAGCCAGAATCTTGCA 59.305 50.000 9.05 0.00 0.00 4.08
57 58 1.074405 ACTCCAGCCAGAATCTTGCAA 59.926 47.619 9.05 0.00 0.00 4.08
58 59 2.165167 CTCCAGCCAGAATCTTGCAAA 58.835 47.619 9.05 0.00 0.00 3.68
59 60 1.888512 TCCAGCCAGAATCTTGCAAAC 59.111 47.619 9.05 0.00 0.00 2.93
60 61 1.067354 CCAGCCAGAATCTTGCAAACC 60.067 52.381 9.05 0.00 0.00 3.27
61 62 1.614903 CAGCCAGAATCTTGCAAACCA 59.385 47.619 9.05 0.00 0.00 3.67
62 63 2.036217 CAGCCAGAATCTTGCAAACCAA 59.964 45.455 9.05 0.00 0.00 3.67
79 80 2.002586 CCAAGCTGGTGTCTATTGACG 58.997 52.381 2.86 0.00 45.70 4.35
80 81 2.002586 CAAGCTGGTGTCTATTGACGG 58.997 52.381 2.86 0.00 45.70 4.79
81 82 0.108138 AGCTGGTGTCTATTGACGGC 60.108 55.000 2.86 4.94 45.70 5.68
82 83 0.391130 GCTGGTGTCTATTGACGGCA 60.391 55.000 0.00 0.00 45.70 5.69
83 84 1.943968 GCTGGTGTCTATTGACGGCAA 60.944 52.381 5.94 5.94 45.70 4.52
84 85 2.002586 CTGGTGTCTATTGACGGCAAG 58.997 52.381 10.69 0.00 45.70 4.01
85 86 1.621317 TGGTGTCTATTGACGGCAAGA 59.379 47.619 10.69 3.21 45.70 3.02
86 87 2.000447 GGTGTCTATTGACGGCAAGAC 59.000 52.381 14.99 14.99 45.70 3.01
87 88 2.611971 GGTGTCTATTGACGGCAAGACA 60.612 50.000 19.61 19.61 45.70 3.41
88 89 3.064207 GTGTCTATTGACGGCAAGACAA 58.936 45.455 23.94 8.75 45.70 3.18
89 90 3.064207 TGTCTATTGACGGCAAGACAAC 58.936 45.455 20.90 10.69 45.70 3.32
90 91 3.244078 TGTCTATTGACGGCAAGACAACT 60.244 43.478 20.90 0.36 45.70 3.16
91 92 3.368236 GTCTATTGACGGCAAGACAACTC 59.632 47.826 16.61 0.00 37.34 3.01
92 93 1.523758 ATTGACGGCAAGACAACTCC 58.476 50.000 10.69 0.00 37.34 3.85
93 94 0.179234 TTGACGGCAAGACAACTCCA 59.821 50.000 0.00 0.00 30.10 3.86
94 95 0.531974 TGACGGCAAGACAACTCCAC 60.532 55.000 0.00 0.00 0.00 4.02
95 96 1.557443 GACGGCAAGACAACTCCACG 61.557 60.000 0.00 0.00 0.00 4.94
96 97 2.317609 CGGCAAGACAACTCCACGG 61.318 63.158 0.00 0.00 0.00 4.94
97 98 1.966451 GGCAAGACAACTCCACGGG 60.966 63.158 0.00 0.00 0.00 5.28
98 99 1.227853 GCAAGACAACTCCACGGGT 60.228 57.895 0.00 0.00 0.00 5.28
99 100 1.507141 GCAAGACAACTCCACGGGTG 61.507 60.000 0.00 0.00 0.00 4.61
100 101 0.105964 CAAGACAACTCCACGGGTGA 59.894 55.000 0.00 0.00 0.00 4.02
101 102 0.834612 AAGACAACTCCACGGGTGAA 59.165 50.000 0.00 0.00 0.00 3.18
102 103 0.393077 AGACAACTCCACGGGTGAAG 59.607 55.000 0.00 0.00 0.00 3.02
103 104 0.602905 GACAACTCCACGGGTGAAGG 60.603 60.000 0.00 0.00 0.00 3.46
104 105 1.342672 ACAACTCCACGGGTGAAGGT 61.343 55.000 0.00 0.00 0.00 3.50
105 106 0.682852 CAACTCCACGGGTGAAGGTA 59.317 55.000 0.00 0.00 0.00 3.08
106 107 0.683412 AACTCCACGGGTGAAGGTAC 59.317 55.000 0.00 0.00 0.00 3.34
107 108 1.214589 CTCCACGGGTGAAGGTACG 59.785 63.158 0.00 0.00 0.00 3.67
108 109 1.530013 CTCCACGGGTGAAGGTACGT 61.530 60.000 0.00 0.00 40.60 3.57
109 110 1.114722 TCCACGGGTGAAGGTACGTT 61.115 55.000 0.00 0.00 37.48 3.99
110 111 0.947180 CCACGGGTGAAGGTACGTTG 60.947 60.000 5.36 0.00 37.48 4.10
111 112 0.947180 CACGGGTGAAGGTACGTTGG 60.947 60.000 5.36 0.00 37.48 3.77
112 113 1.114722 ACGGGTGAAGGTACGTTGGA 61.115 55.000 5.36 0.00 35.90 3.53
113 114 0.248289 CGGGTGAAGGTACGTTGGAT 59.752 55.000 5.36 0.00 0.00 3.41
114 115 1.477700 CGGGTGAAGGTACGTTGGATA 59.522 52.381 5.36 0.00 0.00 2.59
115 116 2.480759 CGGGTGAAGGTACGTTGGATAG 60.481 54.545 5.36 0.00 0.00 2.08
116 117 2.159000 GGGTGAAGGTACGTTGGATAGG 60.159 54.545 5.36 0.00 0.00 2.57
117 118 2.159000 GGTGAAGGTACGTTGGATAGGG 60.159 54.545 5.36 0.00 0.00 3.53
118 119 1.483415 TGAAGGTACGTTGGATAGGGC 59.517 52.381 5.36 0.00 0.00 5.19
119 120 0.462789 AAGGTACGTTGGATAGGGCG 59.537 55.000 0.00 0.00 0.00 6.13
120 121 0.396139 AGGTACGTTGGATAGGGCGA 60.396 55.000 0.00 0.00 0.00 5.54
121 122 0.249197 GGTACGTTGGATAGGGCGAC 60.249 60.000 0.00 0.00 0.00 5.19
134 135 2.407268 GGCGACCAATGATGCATGA 58.593 52.632 2.46 0.00 0.00 3.07
135 136 0.956633 GGCGACCAATGATGCATGAT 59.043 50.000 2.46 0.00 0.00 2.45
136 137 2.153645 GGCGACCAATGATGCATGATA 58.846 47.619 2.46 0.00 0.00 2.15
137 138 2.095567 GGCGACCAATGATGCATGATAC 60.096 50.000 2.46 0.00 0.00 2.24
138 139 2.810274 GCGACCAATGATGCATGATACT 59.190 45.455 2.46 0.00 0.00 2.12
139 140 3.251729 GCGACCAATGATGCATGATACTT 59.748 43.478 2.46 0.00 0.00 2.24
140 141 4.779987 CGACCAATGATGCATGATACTTG 58.220 43.478 2.46 0.00 0.00 3.16
141 142 4.319984 CGACCAATGATGCATGATACTTGG 60.320 45.833 13.48 13.48 38.08 3.61
142 143 3.893200 ACCAATGATGCATGATACTTGGG 59.107 43.478 17.70 9.45 36.76 4.12
143 144 4.146564 CCAATGATGCATGATACTTGGGA 58.853 43.478 2.46 0.00 0.00 4.37
144 145 4.585581 CCAATGATGCATGATACTTGGGAA 59.414 41.667 2.46 0.00 0.00 3.97
145 146 5.278808 CCAATGATGCATGATACTTGGGAAG 60.279 44.000 2.46 0.00 0.00 3.46
146 147 4.776435 TGATGCATGATACTTGGGAAGA 57.224 40.909 2.46 0.00 0.00 2.87
147 148 5.114764 TGATGCATGATACTTGGGAAGAA 57.885 39.130 2.46 0.00 0.00 2.52
148 149 5.128205 TGATGCATGATACTTGGGAAGAAG 58.872 41.667 2.46 0.00 0.00 2.85
149 150 3.282021 TGCATGATACTTGGGAAGAAGC 58.718 45.455 0.00 0.00 0.00 3.86
150 151 2.620585 GCATGATACTTGGGAAGAAGCC 59.379 50.000 0.00 0.00 0.00 4.35
151 152 3.686691 GCATGATACTTGGGAAGAAGCCT 60.687 47.826 0.00 0.00 0.00 4.58
152 153 4.530875 CATGATACTTGGGAAGAAGCCTT 58.469 43.478 0.00 0.00 34.81 4.35
153 154 4.657814 TGATACTTGGGAAGAAGCCTTT 57.342 40.909 0.00 0.00 31.62 3.11
154 155 4.335416 TGATACTTGGGAAGAAGCCTTTG 58.665 43.478 0.00 0.00 31.62 2.77
155 156 2.755952 ACTTGGGAAGAAGCCTTTGT 57.244 45.000 0.00 0.00 31.62 2.83
156 157 3.032265 ACTTGGGAAGAAGCCTTTGTT 57.968 42.857 0.00 0.00 31.62 2.83
157 158 2.959030 ACTTGGGAAGAAGCCTTTGTTC 59.041 45.455 0.00 0.00 36.22 3.18
158 159 3.225940 CTTGGGAAGAAGCCTTTGTTCT 58.774 45.455 1.84 0.00 36.93 3.01
159 160 2.586425 TGGGAAGAAGCCTTTGTTCTG 58.414 47.619 1.84 0.00 36.93 3.02
160 161 1.270826 GGGAAGAAGCCTTTGTTCTGC 59.729 52.381 1.84 0.00 36.93 4.26
161 162 1.956477 GGAAGAAGCCTTTGTTCTGCA 59.044 47.619 0.00 0.00 36.93 4.41
162 163 2.560105 GGAAGAAGCCTTTGTTCTGCAT 59.440 45.455 0.00 0.00 36.93 3.96
163 164 3.366781 GGAAGAAGCCTTTGTTCTGCATC 60.367 47.826 0.00 0.00 36.93 3.91
164 165 2.867624 AGAAGCCTTTGTTCTGCATCA 58.132 42.857 0.00 0.00 32.86 3.07
165 166 2.818432 AGAAGCCTTTGTTCTGCATCAG 59.182 45.455 0.00 0.00 32.86 2.90
166 167 0.886563 AGCCTTTGTTCTGCATCAGC 59.113 50.000 0.00 0.00 42.57 4.26
167 168 0.455633 GCCTTTGTTCTGCATCAGCG 60.456 55.000 0.00 0.00 46.23 5.18
168 169 0.877071 CCTTTGTTCTGCATCAGCGT 59.123 50.000 0.00 0.00 46.23 5.07
169 170 1.267806 CCTTTGTTCTGCATCAGCGTT 59.732 47.619 0.00 0.00 46.23 4.84
170 171 2.287788 CCTTTGTTCTGCATCAGCGTTT 60.288 45.455 0.00 0.00 46.23 3.60
171 172 3.374745 CTTTGTTCTGCATCAGCGTTTT 58.625 40.909 0.00 0.00 46.23 2.43
172 173 2.686558 TGTTCTGCATCAGCGTTTTC 57.313 45.000 0.00 0.00 46.23 2.29
173 174 1.266718 TGTTCTGCATCAGCGTTTTCC 59.733 47.619 0.00 0.00 46.23 3.13
174 175 1.537202 GTTCTGCATCAGCGTTTTCCT 59.463 47.619 0.00 0.00 46.23 3.36
175 176 1.442769 TCTGCATCAGCGTTTTCCTC 58.557 50.000 0.00 0.00 46.23 3.71
176 177 1.002430 TCTGCATCAGCGTTTTCCTCT 59.998 47.619 0.00 0.00 46.23 3.69
177 178 2.233676 TCTGCATCAGCGTTTTCCTCTA 59.766 45.455 0.00 0.00 46.23 2.43
178 179 2.346803 TGCATCAGCGTTTTCCTCTAC 58.653 47.619 0.00 0.00 46.23 2.59
179 180 2.028112 TGCATCAGCGTTTTCCTCTACT 60.028 45.455 0.00 0.00 46.23 2.57
180 181 2.349886 GCATCAGCGTTTTCCTCTACTG 59.650 50.000 0.00 0.00 0.00 2.74
181 182 3.589988 CATCAGCGTTTTCCTCTACTGT 58.410 45.455 0.00 0.00 0.00 3.55
182 183 3.299340 TCAGCGTTTTCCTCTACTGTC 57.701 47.619 0.00 0.00 0.00 3.51
183 184 1.986378 CAGCGTTTTCCTCTACTGTCG 59.014 52.381 0.00 0.00 0.00 4.35
184 185 1.884579 AGCGTTTTCCTCTACTGTCGA 59.115 47.619 0.00 0.00 0.00 4.20
185 186 1.984297 GCGTTTTCCTCTACTGTCGAC 59.016 52.381 9.11 9.11 0.00 4.20
186 187 2.351544 GCGTTTTCCTCTACTGTCGACT 60.352 50.000 17.92 0.00 0.00 4.18
187 188 3.856267 GCGTTTTCCTCTACTGTCGACTT 60.856 47.826 17.92 6.30 0.00 3.01
188 189 3.669122 CGTTTTCCTCTACTGTCGACTTG 59.331 47.826 17.92 11.96 0.00 3.16
189 190 3.936372 TTTCCTCTACTGTCGACTTGG 57.064 47.619 17.92 9.41 0.00 3.61
190 191 1.835494 TCCTCTACTGTCGACTTGGG 58.165 55.000 17.92 10.07 0.00 4.12
191 192 0.818296 CCTCTACTGTCGACTTGGGG 59.182 60.000 17.92 9.37 0.00 4.96
192 193 0.818296 CTCTACTGTCGACTTGGGGG 59.182 60.000 17.92 0.99 0.00 5.40
193 194 1.218316 CTACTGTCGACTTGGGGGC 59.782 63.158 17.92 0.00 0.00 5.80
194 195 1.534476 TACTGTCGACTTGGGGGCA 60.534 57.895 17.92 0.00 0.00 5.36
195 196 1.122632 TACTGTCGACTTGGGGGCAA 61.123 55.000 17.92 0.00 0.00 4.52
196 197 1.672356 CTGTCGACTTGGGGGCAAG 60.672 63.158 17.92 0.00 38.11 4.01
197 198 2.397413 CTGTCGACTTGGGGGCAAGT 62.397 60.000 17.92 0.00 46.86 3.16
209 210 3.882025 GCAAGTCGCCTCTCAAGG 58.118 61.111 0.00 0.00 46.44 3.61
210 211 1.743252 GCAAGTCGCCTCTCAAGGG 60.743 63.158 0.00 0.00 43.58 3.95
216 217 3.648694 GCCTCTCAAGGGGTAGGG 58.351 66.667 0.00 0.00 43.58 3.53
217 218 1.003051 GCCTCTCAAGGGGTAGGGA 59.997 63.158 0.00 0.00 43.58 4.20
218 219 0.620700 GCCTCTCAAGGGGTAGGGAA 60.621 60.000 0.00 0.00 43.58 3.97
219 220 1.977202 GCCTCTCAAGGGGTAGGGAAT 60.977 57.143 0.00 0.00 43.58 3.01
220 221 1.771255 CCTCTCAAGGGGTAGGGAATG 59.229 57.143 0.00 0.00 39.21 2.67
221 222 2.482494 CTCTCAAGGGGTAGGGAATGT 58.518 52.381 0.00 0.00 0.00 2.71
222 223 2.436173 CTCTCAAGGGGTAGGGAATGTC 59.564 54.545 0.00 0.00 0.00 3.06
223 224 2.196595 CTCAAGGGGTAGGGAATGTCA 58.803 52.381 0.00 0.00 0.00 3.58
224 225 2.780010 CTCAAGGGGTAGGGAATGTCAT 59.220 50.000 0.00 0.00 0.00 3.06
225 226 2.509548 TCAAGGGGTAGGGAATGTCATG 59.490 50.000 0.00 0.00 0.00 3.07
226 227 1.522900 AGGGGTAGGGAATGTCATGG 58.477 55.000 0.00 0.00 0.00 3.66
227 228 0.178990 GGGGTAGGGAATGTCATGGC 60.179 60.000 0.00 0.00 0.00 4.40
228 229 0.550914 GGGTAGGGAATGTCATGGCA 59.449 55.000 0.60 0.60 0.00 4.92
229 230 1.680338 GGTAGGGAATGTCATGGCAC 58.320 55.000 0.00 0.00 0.00 5.01
230 231 1.299541 GTAGGGAATGTCATGGCACG 58.700 55.000 0.00 0.00 0.00 5.34
231 232 0.180171 TAGGGAATGTCATGGCACGG 59.820 55.000 0.00 0.00 0.00 4.94
232 233 2.774799 GGGAATGTCATGGCACGGC 61.775 63.158 0.00 0.00 0.00 5.68
244 245 4.767255 CACGGCCCAGCTCAGGAC 62.767 72.222 0.00 0.00 0.00 3.85
248 249 4.154347 GCCCAGCTCAGGACGGAG 62.154 72.222 3.35 0.00 37.97 4.63
249 250 3.465403 CCCAGCTCAGGACGGAGG 61.465 72.222 1.86 0.00 35.41 4.30
250 251 4.154347 CCAGCTCAGGACGGAGGC 62.154 72.222 1.86 0.00 35.41 4.70
251 252 4.154347 CAGCTCAGGACGGAGGCC 62.154 72.222 0.00 0.00 35.41 5.19
254 255 3.003173 CTCAGGACGGAGGCCCAA 61.003 66.667 0.00 0.00 0.00 4.12
255 256 3.003173 TCAGGACGGAGGCCCAAG 61.003 66.667 0.00 0.00 0.00 3.61
256 257 4.101448 CAGGACGGAGGCCCAAGG 62.101 72.222 0.00 0.00 0.00 3.61
277 278 2.507102 CGCGACGCAACAGGAGAT 60.507 61.111 21.35 0.00 0.00 2.75
278 279 2.094659 CGCGACGCAACAGGAGATT 61.095 57.895 21.35 0.00 0.00 2.40
279 280 1.421485 GCGACGCAACAGGAGATTG 59.579 57.895 16.42 0.00 0.00 2.67
280 281 1.970917 GCGACGCAACAGGAGATTGG 61.971 60.000 16.42 0.00 0.00 3.16
281 282 1.796796 GACGCAACAGGAGATTGGC 59.203 57.895 0.00 0.00 0.00 4.52
282 283 0.674895 GACGCAACAGGAGATTGGCT 60.675 55.000 0.00 0.00 0.00 4.75
283 284 0.674895 ACGCAACAGGAGATTGGCTC 60.675 55.000 0.00 0.00 43.17 4.70
284 285 1.699656 CGCAACAGGAGATTGGCTCG 61.700 60.000 0.00 0.00 44.91 5.03
285 286 0.391661 GCAACAGGAGATTGGCTCGA 60.392 55.000 0.00 0.00 44.91 4.04
286 287 1.649664 CAACAGGAGATTGGCTCGAG 58.350 55.000 8.45 8.45 44.91 4.04
287 288 0.107945 AACAGGAGATTGGCTCGAGC 60.108 55.000 29.38 29.38 44.91 5.03
288 289 1.591059 CAGGAGATTGGCTCGAGCG 60.591 63.158 29.81 9.93 44.91 5.03
289 290 2.055042 AGGAGATTGGCTCGAGCGT 61.055 57.895 29.81 18.69 44.91 5.07
290 291 1.153549 GGAGATTGGCTCGAGCGTT 60.154 57.895 29.81 17.32 44.91 4.84
291 292 1.148759 GGAGATTGGCTCGAGCGTTC 61.149 60.000 29.81 23.84 44.91 3.95
304 305 4.124351 CGTTCGAGGCCCAGCGTA 62.124 66.667 0.00 0.00 0.00 4.42
305 306 2.263540 GTTCGAGGCCCAGCGTAA 59.736 61.111 0.00 0.00 0.00 3.18
306 307 1.810030 GTTCGAGGCCCAGCGTAAG 60.810 63.158 0.00 0.00 43.44 2.34
307 308 3.014085 TTCGAGGCCCAGCGTAAGG 62.014 63.158 0.00 0.00 38.28 2.69
308 309 3.458163 CGAGGCCCAGCGTAAGGA 61.458 66.667 0.00 0.00 38.28 3.36
309 310 2.501610 GAGGCCCAGCGTAAGGAG 59.498 66.667 0.00 0.00 38.28 3.69
310 311 3.083997 AGGCCCAGCGTAAGGAGG 61.084 66.667 0.00 0.00 38.28 4.30
311 312 4.176752 GGCCCAGCGTAAGGAGGG 62.177 72.222 0.00 0.00 44.37 4.30
312 313 3.081409 GCCCAGCGTAAGGAGGGA 61.081 66.667 0.00 0.00 44.30 4.20
313 314 2.666098 GCCCAGCGTAAGGAGGGAA 61.666 63.158 0.00 0.00 44.30 3.97
314 315 1.984288 GCCCAGCGTAAGGAGGGAAT 61.984 60.000 0.00 0.00 44.30 3.01
315 316 0.546598 CCCAGCGTAAGGAGGGAATT 59.453 55.000 0.00 0.00 44.30 2.17
316 317 1.475213 CCCAGCGTAAGGAGGGAATTC 60.475 57.143 0.00 0.00 44.30 2.17
317 318 1.486726 CCAGCGTAAGGAGGGAATTCT 59.513 52.381 5.23 0.00 38.28 2.40
318 319 2.698797 CCAGCGTAAGGAGGGAATTCTA 59.301 50.000 5.23 0.00 38.28 2.10
319 320 3.243907 CCAGCGTAAGGAGGGAATTCTAG 60.244 52.174 5.23 0.00 38.28 2.43
320 321 2.966516 AGCGTAAGGAGGGAATTCTAGG 59.033 50.000 5.23 0.00 38.28 3.02
321 322 2.548280 GCGTAAGGAGGGAATTCTAGGC 60.548 54.545 5.23 2.61 38.28 3.93
322 323 2.698797 CGTAAGGAGGGAATTCTAGGCA 59.301 50.000 5.23 0.00 0.00 4.75
323 324 3.492829 CGTAAGGAGGGAATTCTAGGCAC 60.493 52.174 5.23 0.00 0.00 5.01
324 325 1.123928 AGGAGGGAATTCTAGGCACG 58.876 55.000 5.23 0.00 0.00 5.34
325 326 0.106894 GGAGGGAATTCTAGGCACGG 59.893 60.000 5.23 0.00 0.00 4.94
326 327 0.533085 GAGGGAATTCTAGGCACGGC 60.533 60.000 5.23 0.00 0.00 5.68
327 328 1.223487 GGGAATTCTAGGCACGGCA 59.777 57.895 5.23 0.00 0.00 5.69
328 329 0.393808 GGGAATTCTAGGCACGGCAA 60.394 55.000 5.23 0.00 0.00 4.52
329 330 1.017387 GGAATTCTAGGCACGGCAAG 58.983 55.000 5.23 0.00 0.00 4.01
330 331 0.378610 GAATTCTAGGCACGGCAAGC 59.621 55.000 0.00 0.00 0.00 4.01
331 332 0.322456 AATTCTAGGCACGGCAAGCA 60.322 50.000 0.51 0.00 0.00 3.91
332 333 0.745845 ATTCTAGGCACGGCAAGCAG 60.746 55.000 0.51 0.00 0.00 4.24
333 334 3.503363 CTAGGCACGGCAAGCAGC 61.503 66.667 0.51 0.00 44.65 5.25
334 335 3.965539 CTAGGCACGGCAAGCAGCT 62.966 63.158 0.00 0.00 44.79 4.24
335 336 3.958147 TAGGCACGGCAAGCAGCTC 62.958 63.158 0.00 0.00 44.79 4.09
337 338 4.099170 GCACGGCAAGCAGCTCAG 62.099 66.667 0.00 0.00 44.79 3.35
338 339 4.099170 CACGGCAAGCAGCTCAGC 62.099 66.667 10.59 10.59 44.79 4.26
340 341 2.125391 CGGCAAGCAGCTCAGCTA 60.125 61.111 16.76 0.00 45.89 3.32
341 342 1.523258 CGGCAAGCAGCTCAGCTAT 60.523 57.895 16.76 0.00 45.89 2.97
342 343 0.249615 CGGCAAGCAGCTCAGCTATA 60.250 55.000 16.76 0.00 45.89 1.31
343 344 1.607509 CGGCAAGCAGCTCAGCTATAT 60.608 52.381 16.76 0.00 45.89 0.86
344 345 1.805345 GGCAAGCAGCTCAGCTATATG 59.195 52.381 16.76 0.00 45.89 1.78
345 346 2.549563 GGCAAGCAGCTCAGCTATATGA 60.550 50.000 16.76 0.00 45.89 2.15
346 347 2.737783 GCAAGCAGCTCAGCTATATGAG 59.262 50.000 0.00 0.00 45.89 2.90
347 348 3.327626 CAAGCAGCTCAGCTATATGAGG 58.672 50.000 0.00 0.00 45.89 3.86
348 349 2.886913 AGCAGCTCAGCTATATGAGGA 58.113 47.619 0.00 0.00 45.66 3.71
349 350 2.827322 AGCAGCTCAGCTATATGAGGAG 59.173 50.000 0.00 0.00 45.66 3.69
350 351 2.824936 GCAGCTCAGCTATATGAGGAGA 59.175 50.000 0.00 0.00 45.66 3.71
351 352 3.448301 GCAGCTCAGCTATATGAGGAGAT 59.552 47.826 0.00 0.00 45.66 2.75
352 353 4.081531 GCAGCTCAGCTATATGAGGAGATT 60.082 45.833 0.00 0.00 45.66 2.40
353 354 5.653507 CAGCTCAGCTATATGAGGAGATTC 58.346 45.833 0.00 0.00 45.66 2.52
354 355 5.185442 CAGCTCAGCTATATGAGGAGATTCA 59.815 44.000 0.00 0.00 45.66 2.57
355 356 5.419788 AGCTCAGCTATATGAGGAGATTCAG 59.580 44.000 0.00 0.00 45.66 3.02
356 357 5.418524 GCTCAGCTATATGAGGAGATTCAGA 59.581 44.000 5.92 0.00 45.66 3.27
357 358 6.405065 GCTCAGCTATATGAGGAGATTCAGAG 60.405 46.154 5.92 0.00 45.66 3.35
358 359 6.788218 TCAGCTATATGAGGAGATTCAGAGA 58.212 40.000 0.00 0.00 0.00 3.10
359 360 6.885918 TCAGCTATATGAGGAGATTCAGAGAG 59.114 42.308 0.00 0.00 32.39 3.20
360 361 6.095860 CAGCTATATGAGGAGATTCAGAGAGG 59.904 46.154 0.00 0.00 30.50 3.69
361 362 6.011717 AGCTATATGAGGAGATTCAGAGAGGA 60.012 42.308 0.00 0.00 30.50 3.71
362 363 6.319658 GCTATATGAGGAGATTCAGAGAGGAG 59.680 46.154 0.00 0.00 30.50 3.69
363 364 4.812403 ATGAGGAGATTCAGAGAGGAGA 57.188 45.455 0.00 0.00 0.00 3.71
364 365 4.599720 TGAGGAGATTCAGAGAGGAGAA 57.400 45.455 0.00 0.00 0.00 2.87
365 366 4.277476 TGAGGAGATTCAGAGAGGAGAAC 58.723 47.826 0.00 0.00 0.00 3.01
366 367 4.264128 TGAGGAGATTCAGAGAGGAGAACA 60.264 45.833 0.00 0.00 0.00 3.18
367 368 4.023291 AGGAGATTCAGAGAGGAGAACAC 58.977 47.826 0.00 0.00 0.00 3.32
368 369 3.181491 GGAGATTCAGAGAGGAGAACACG 60.181 52.174 0.00 0.00 0.00 4.49
369 370 2.757868 AGATTCAGAGAGGAGAACACGG 59.242 50.000 0.00 0.00 0.00 4.94
370 371 1.257743 TTCAGAGAGGAGAACACGGG 58.742 55.000 0.00 0.00 0.00 5.28
371 372 0.612174 TCAGAGAGGAGAACACGGGG 60.612 60.000 0.00 0.00 0.00 5.73
372 373 1.305381 AGAGAGGAGAACACGGGGG 60.305 63.158 0.00 0.00 0.00 5.40
388 389 2.201921 GGGGGAGAAAAGACTGGAAC 57.798 55.000 0.00 0.00 0.00 3.62
389 390 1.271982 GGGGGAGAAAAGACTGGAACC 60.272 57.143 0.00 0.00 0.00 3.62
390 391 1.705745 GGGGAGAAAAGACTGGAACCT 59.294 52.381 0.00 0.00 0.00 3.50
391 392 2.910977 GGGGAGAAAAGACTGGAACCTA 59.089 50.000 0.00 0.00 0.00 3.08
392 393 3.055021 GGGGAGAAAAGACTGGAACCTAG 60.055 52.174 0.00 0.00 0.00 3.02
393 394 3.838903 GGGAGAAAAGACTGGAACCTAGA 59.161 47.826 0.00 0.00 0.00 2.43
394 395 4.471747 GGGAGAAAAGACTGGAACCTAGAT 59.528 45.833 0.00 0.00 0.00 1.98
395 396 5.395879 GGGAGAAAAGACTGGAACCTAGATC 60.396 48.000 0.00 0.00 0.00 2.75
396 397 5.395879 GGAGAAAAGACTGGAACCTAGATCC 60.396 48.000 7.41 7.41 37.48 3.36
397 398 5.346270 AGAAAAGACTGGAACCTAGATCCT 58.654 41.667 13.63 0.00 37.85 3.24
398 399 5.423931 AGAAAAGACTGGAACCTAGATCCTC 59.576 44.000 13.63 6.09 37.85 3.71
399 400 4.618378 AAGACTGGAACCTAGATCCTCT 57.382 45.455 13.63 7.81 37.85 3.69
400 401 4.178956 AGACTGGAACCTAGATCCTCTC 57.821 50.000 13.63 8.88 37.85 3.20
401 402 3.791545 AGACTGGAACCTAGATCCTCTCT 59.208 47.826 13.63 10.44 37.85 3.10
402 403 4.141251 AGACTGGAACCTAGATCCTCTCTC 60.141 50.000 13.63 5.32 37.85 3.20
403 404 3.791545 ACTGGAACCTAGATCCTCTCTCT 59.208 47.826 13.63 0.00 37.85 3.10
404 405 4.144297 CTGGAACCTAGATCCTCTCTCTG 58.856 52.174 13.63 0.00 37.85 3.35
405 406 3.529734 TGGAACCTAGATCCTCTCTCTGT 59.470 47.826 13.63 0.00 37.85 3.41
406 407 4.727332 TGGAACCTAGATCCTCTCTCTGTA 59.273 45.833 13.63 0.00 37.85 2.74
407 408 5.374154 TGGAACCTAGATCCTCTCTCTGTAT 59.626 44.000 13.63 0.00 37.85 2.29
408 409 5.944007 GGAACCTAGATCCTCTCTCTGTATC 59.056 48.000 7.16 0.00 35.28 2.24
409 410 6.466615 GGAACCTAGATCCTCTCTCTGTATCA 60.467 46.154 7.16 0.00 35.28 2.15
410 411 6.718593 ACCTAGATCCTCTCTCTGTATCAT 57.281 41.667 0.00 0.00 35.28 2.45
411 412 7.102518 ACCTAGATCCTCTCTCTGTATCATT 57.897 40.000 0.00 0.00 35.28 2.57
412 413 7.534852 ACCTAGATCCTCTCTCTGTATCATTT 58.465 38.462 0.00 0.00 35.28 2.32
413 414 8.010105 ACCTAGATCCTCTCTCTGTATCATTTT 58.990 37.037 0.00 0.00 35.28 1.82
414 415 8.522830 CCTAGATCCTCTCTCTGTATCATTTTC 58.477 40.741 0.00 0.00 35.28 2.29
415 416 7.301868 AGATCCTCTCTCTGTATCATTTTCC 57.698 40.000 0.00 0.00 0.00 3.13
416 417 5.878406 TCCTCTCTCTGTATCATTTTCCC 57.122 43.478 0.00 0.00 0.00 3.97
417 418 5.533112 TCCTCTCTCTGTATCATTTTCCCT 58.467 41.667 0.00 0.00 0.00 4.20
418 419 5.600484 TCCTCTCTCTGTATCATTTTCCCTC 59.400 44.000 0.00 0.00 0.00 4.30
419 420 5.602145 CCTCTCTCTGTATCATTTTCCCTCT 59.398 44.000 0.00 0.00 0.00 3.69
420 421 6.099557 CCTCTCTCTGTATCATTTTCCCTCTT 59.900 42.308 0.00 0.00 0.00 2.85
421 422 7.118496 TCTCTCTGTATCATTTTCCCTCTTC 57.882 40.000 0.00 0.00 0.00 2.87
422 423 6.900186 TCTCTCTGTATCATTTTCCCTCTTCT 59.100 38.462 0.00 0.00 0.00 2.85
423 424 7.069331 TCTCTCTGTATCATTTTCCCTCTTCTC 59.931 40.741 0.00 0.00 0.00 2.87
424 425 6.098982 TCTCTGTATCATTTTCCCTCTTCTCC 59.901 42.308 0.00 0.00 0.00 3.71
425 426 5.966935 TCTGTATCATTTTCCCTCTTCTCCT 59.033 40.000 0.00 0.00 0.00 3.69
426 427 7.132805 TCTGTATCATTTTCCCTCTTCTCCTA 58.867 38.462 0.00 0.00 0.00 2.94
427 428 7.070074 TCTGTATCATTTTCCCTCTTCTCCTAC 59.930 40.741 0.00 0.00 0.00 3.18
428 429 5.638530 ATCATTTTCCCTCTTCTCCTACC 57.361 43.478 0.00 0.00 0.00 3.18
429 430 4.699994 TCATTTTCCCTCTTCTCCTACCT 58.300 43.478 0.00 0.00 0.00 3.08
430 431 4.717280 TCATTTTCCCTCTTCTCCTACCTC 59.283 45.833 0.00 0.00 0.00 3.85
431 432 4.421574 TTTTCCCTCTTCTCCTACCTCT 57.578 45.455 0.00 0.00 0.00 3.69
432 433 3.390175 TTCCCTCTTCTCCTACCTCTG 57.610 52.381 0.00 0.00 0.00 3.35
433 434 1.063567 TCCCTCTTCTCCTACCTCTGC 60.064 57.143 0.00 0.00 0.00 4.26
434 435 1.408969 CCTCTTCTCCTACCTCTGCC 58.591 60.000 0.00 0.00 0.00 4.85
435 436 1.408969 CTCTTCTCCTACCTCTGCCC 58.591 60.000 0.00 0.00 0.00 5.36
436 437 0.710588 TCTTCTCCTACCTCTGCCCA 59.289 55.000 0.00 0.00 0.00 5.36
437 438 1.292242 TCTTCTCCTACCTCTGCCCAT 59.708 52.381 0.00 0.00 0.00 4.00
438 439 2.518407 TCTTCTCCTACCTCTGCCCATA 59.482 50.000 0.00 0.00 0.00 2.74
439 440 3.052109 TCTTCTCCTACCTCTGCCCATAA 60.052 47.826 0.00 0.00 0.00 1.90
440 441 3.414759 TCTCCTACCTCTGCCCATAAA 57.585 47.619 0.00 0.00 0.00 1.40
441 442 3.941629 TCTCCTACCTCTGCCCATAAAT 58.058 45.455 0.00 0.00 0.00 1.40
442 443 4.307259 TCTCCTACCTCTGCCCATAAATT 58.693 43.478 0.00 0.00 0.00 1.82
443 444 4.103153 TCTCCTACCTCTGCCCATAAATTG 59.897 45.833 0.00 0.00 0.00 2.32
444 445 3.785887 TCCTACCTCTGCCCATAAATTGT 59.214 43.478 0.00 0.00 0.00 2.71
445 446 4.972568 TCCTACCTCTGCCCATAAATTGTA 59.027 41.667 0.00 0.00 0.00 2.41
446 447 5.610982 TCCTACCTCTGCCCATAAATTGTAT 59.389 40.000 0.00 0.00 0.00 2.29
447 448 5.940470 CCTACCTCTGCCCATAAATTGTATC 59.060 44.000 0.00 0.00 0.00 2.24
448 449 5.653255 ACCTCTGCCCATAAATTGTATCT 57.347 39.130 0.00 0.00 0.00 1.98
449 450 5.380043 ACCTCTGCCCATAAATTGTATCTG 58.620 41.667 0.00 0.00 0.00 2.90
450 451 5.132648 ACCTCTGCCCATAAATTGTATCTGA 59.867 40.000 0.00 0.00 0.00 3.27
451 452 6.064060 CCTCTGCCCATAAATTGTATCTGAA 58.936 40.000 0.00 0.00 0.00 3.02
452 453 6.718454 CCTCTGCCCATAAATTGTATCTGAAT 59.282 38.462 0.00 0.00 0.00 2.57
453 454 7.232127 CCTCTGCCCATAAATTGTATCTGAATT 59.768 37.037 0.00 0.00 0.00 2.17
454 455 7.944061 TCTGCCCATAAATTGTATCTGAATTG 58.056 34.615 0.00 0.00 0.00 2.32
455 456 7.560991 TCTGCCCATAAATTGTATCTGAATTGT 59.439 33.333 0.00 0.00 0.00 2.71
456 457 8.759481 TGCCCATAAATTGTATCTGAATTGTA 57.241 30.769 0.00 0.00 0.00 2.41
457 458 9.365906 TGCCCATAAATTGTATCTGAATTGTAT 57.634 29.630 0.00 0.00 0.00 2.29
458 459 9.846248 GCCCATAAATTGTATCTGAATTGTATC 57.154 33.333 0.00 0.00 0.00 2.24
467 468 8.948631 TGTATCTGAATTGTATCAGGAAGAAC 57.051 34.615 4.63 0.00 45.55 3.01
468 469 7.987458 TGTATCTGAATTGTATCAGGAAGAACC 59.013 37.037 4.63 0.00 45.55 3.62
480 481 2.712709 GGAAGAACCTTGAACCCTAGC 58.287 52.381 0.00 0.00 35.41 3.42
481 482 2.306219 GGAAGAACCTTGAACCCTAGCT 59.694 50.000 0.00 0.00 35.41 3.32
482 483 3.339141 GAAGAACCTTGAACCCTAGCTG 58.661 50.000 0.00 0.00 0.00 4.24
483 484 1.630878 AGAACCTTGAACCCTAGCTGG 59.369 52.381 0.00 0.00 0.00 4.85
484 485 1.351350 GAACCTTGAACCCTAGCTGGT 59.649 52.381 0.00 0.00 41.55 4.00
706 721 3.370104 TGGTGAAAAAGAAGGAAAGGCA 58.630 40.909 0.00 0.00 0.00 4.75
857 878 2.038654 TAACCCCACCCACACCCA 60.039 61.111 0.00 0.00 0.00 4.51
858 879 2.420466 CTAACCCCACCCACACCCAC 62.420 65.000 0.00 0.00 0.00 4.61
860 881 4.596585 CCCCACCCACACCCACAC 62.597 72.222 0.00 0.00 0.00 3.82
861 882 4.596585 CCCACCCACACCCACACC 62.597 72.222 0.00 0.00 0.00 4.16
862 883 4.596585 CCACCCACACCCACACCC 62.597 72.222 0.00 0.00 0.00 4.61
914 935 1.816224 ACCAACGCAACCACATATTCC 59.184 47.619 0.00 0.00 0.00 3.01
915 936 1.815613 CCAACGCAACCACATATTCCA 59.184 47.619 0.00 0.00 0.00 3.53
1014 1035 2.737881 TATCCGGCCGTGGAAAGGG 61.738 63.158 26.12 5.84 42.46 3.95
1028 1049 1.418264 GAAAGGGGAAGCCTAGCCTAG 59.582 57.143 0.00 0.00 0.00 3.02
1060 1081 2.421399 GGTCGGTACCGGCTTAGCT 61.421 63.158 35.47 0.00 44.25 3.32
1061 1082 1.103398 GGTCGGTACCGGCTTAGCTA 61.103 60.000 35.47 11.44 44.25 3.32
1062 1083 0.310232 GTCGGTACCGGCTTAGCTAG 59.690 60.000 31.04 0.34 41.28 3.42
1086 1110 1.134907 CAATCTGCAGGTGAATTGGGC 60.135 52.381 15.13 0.00 0.00 5.36
1087 1111 0.040058 ATCTGCAGGTGAATTGGGCA 59.960 50.000 15.13 0.00 0.00 5.36
1088 1112 0.895100 TCTGCAGGTGAATTGGGCAC 60.895 55.000 15.13 0.00 35.56 5.01
1089 1113 0.896940 CTGCAGGTGAATTGGGCACT 60.897 55.000 5.57 0.00 36.53 4.40
1090 1114 0.403655 TGCAGGTGAATTGGGCACTA 59.596 50.000 0.00 0.00 36.53 2.74
1091 1115 1.098050 GCAGGTGAATTGGGCACTAG 58.902 55.000 0.00 0.00 36.53 2.57
1092 1116 1.098050 CAGGTGAATTGGGCACTAGC 58.902 55.000 0.00 0.00 36.53 3.42
1093 1117 0.698238 AGGTGAATTGGGCACTAGCA 59.302 50.000 0.00 0.00 44.61 3.49
1094 1118 1.098050 GGTGAATTGGGCACTAGCAG 58.902 55.000 0.00 0.00 44.61 4.24
1128 1152 4.334759 AGCATCAATCAAGTGAGGATTTCG 59.665 41.667 0.00 0.00 32.86 3.46
1339 1363 4.394712 ACGCGGCCTTGCTAGCTT 62.395 61.111 17.23 0.00 32.38 3.74
1340 1364 2.202878 CGCGGCCTTGCTAGCTTA 60.203 61.111 17.23 3.02 32.38 3.09
1341 1365 2.526120 CGCGGCCTTGCTAGCTTAC 61.526 63.158 17.23 2.69 32.38 2.34
1342 1366 1.153349 GCGGCCTTGCTAGCTTACT 60.153 57.895 17.23 0.00 32.02 2.24
1343 1367 0.104304 GCGGCCTTGCTAGCTTACTA 59.896 55.000 17.23 0.00 32.02 1.82
2024 2120 2.652095 CCCGTGTCGTACCCACCAT 61.652 63.158 5.10 0.00 0.00 3.55
2077 2173 1.521457 GAATGCGCCGGAGATCACA 60.521 57.895 10.31 0.00 0.00 3.58
2160 2325 1.202222 CGATGTTTGAATGCCTGAGCC 60.202 52.381 0.00 0.00 38.69 4.70
2370 2549 7.731882 ACATGCAAATCAAAATTGATCACAA 57.268 28.000 8.96 0.00 46.60 3.33
2371 2550 7.577979 ACATGCAAATCAAAATTGATCACAAC 58.422 30.769 8.96 0.05 46.60 3.32
2373 2552 7.549615 TGCAAATCAAAATTGATCACAACAA 57.450 28.000 8.96 0.00 46.60 2.83
2378 2580 9.991388 AAATCAAAATTGATCACAACAAAACTG 57.009 25.926 8.96 0.00 46.60 3.16
2403 2605 7.970061 TGATAATTAAGTGAAAGCTGACATTGC 59.030 33.333 0.00 0.00 0.00 3.56
2452 2654 2.656947 TTCCTGAAGAACCCCACAAG 57.343 50.000 0.00 0.00 0.00 3.16
2633 2835 4.803098 ATACTCCTCTTACAAACGCTGT 57.197 40.909 0.00 0.00 42.47 4.40
3046 3248 5.528043 TCTTCACAGCCTTCTCATAGATC 57.472 43.478 0.00 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.262915 CGTGTCTGGCTCCACCTC 59.737 66.667 0.00 0.00 40.22 3.85
1 2 2.203640 TCGTGTCTGGCTCCACCT 60.204 61.111 0.00 0.00 40.22 4.00
2 3 2.048127 GTCGTGTCTGGCTCCACC 60.048 66.667 0.00 0.00 39.84 4.61
3 4 1.373497 CAGTCGTGTCTGGCTCCAC 60.373 63.158 0.00 0.00 0.00 4.02
4 5 3.051210 CAGTCGTGTCTGGCTCCA 58.949 61.111 0.00 0.00 0.00 3.86
5 6 2.433318 GCAGTCGTGTCTGGCTCC 60.433 66.667 7.01 0.00 36.12 4.70
6 7 2.024319 GTGCAGTCGTGTCTGGCTC 61.024 63.158 0.00 0.00 36.12 4.70
7 8 2.029666 GTGCAGTCGTGTCTGGCT 59.970 61.111 0.00 0.00 36.12 4.75
8 9 3.044305 GGTGCAGTCGTGTCTGGC 61.044 66.667 0.00 0.00 36.12 4.85
9 10 1.665916 CTGGTGCAGTCGTGTCTGG 60.666 63.158 0.00 0.00 36.12 3.86
10 11 2.313172 GCTGGTGCAGTCGTGTCTG 61.313 63.158 0.00 0.00 39.41 3.51
11 12 2.029666 GCTGGTGCAGTCGTGTCT 59.970 61.111 0.00 0.00 39.41 3.41
12 13 2.024319 GAGCTGGTGCAGTCGTGTC 61.024 63.158 0.00 0.00 42.74 3.67
13 14 2.029666 GAGCTGGTGCAGTCGTGT 59.970 61.111 0.00 0.00 42.74 4.49
14 15 2.740055 GGAGCTGGTGCAGTCGTG 60.740 66.667 0.00 0.00 42.74 4.35
15 16 3.233980 TGGAGCTGGTGCAGTCGT 61.234 61.111 0.00 0.00 42.74 4.34
16 17 2.740055 GTGGAGCTGGTGCAGTCG 60.740 66.667 0.00 0.00 42.74 4.18
17 18 2.740055 CGTGGAGCTGGTGCAGTC 60.740 66.667 0.00 0.00 42.74 3.51
18 19 4.996434 GCGTGGAGCTGGTGCAGT 62.996 66.667 0.00 0.00 44.04 4.40
28 29 4.767255 GGCTGGAGTGGCGTGGAG 62.767 72.222 0.00 0.00 0.00 3.86
31 32 2.809861 ATTCTGGCTGGAGTGGCGTG 62.810 60.000 0.00 0.00 35.06 5.34
32 33 2.527951 GATTCTGGCTGGAGTGGCGT 62.528 60.000 0.00 0.00 35.06 5.68
33 34 1.817099 GATTCTGGCTGGAGTGGCG 60.817 63.158 0.00 0.00 35.06 5.69
34 35 0.034670 AAGATTCTGGCTGGAGTGGC 60.035 55.000 0.00 0.00 0.00 5.01
35 36 1.747709 CAAGATTCTGGCTGGAGTGG 58.252 55.000 0.00 0.00 0.00 4.00
36 37 1.093159 GCAAGATTCTGGCTGGAGTG 58.907 55.000 5.75 0.00 0.00 3.51
37 38 0.694771 TGCAAGATTCTGGCTGGAGT 59.305 50.000 14.09 0.00 30.50 3.85
38 39 1.830279 TTGCAAGATTCTGGCTGGAG 58.170 50.000 14.09 0.00 30.50 3.86
39 40 1.888512 GTTTGCAAGATTCTGGCTGGA 59.111 47.619 14.09 0.00 30.50 3.86
40 41 1.067354 GGTTTGCAAGATTCTGGCTGG 60.067 52.381 14.09 0.00 30.50 4.85
41 42 1.614903 TGGTTTGCAAGATTCTGGCTG 59.385 47.619 14.09 0.00 30.50 4.85
42 43 1.999648 TGGTTTGCAAGATTCTGGCT 58.000 45.000 14.09 0.00 30.50 4.75
43 44 2.680577 CTTGGTTTGCAAGATTCTGGC 58.319 47.619 6.06 6.06 0.00 4.85
44 45 2.298163 AGCTTGGTTTGCAAGATTCTGG 59.702 45.455 0.00 0.00 0.00 3.86
45 46 3.314553 CAGCTTGGTTTGCAAGATTCTG 58.685 45.455 0.00 0.58 0.00 3.02
46 47 2.298163 CCAGCTTGGTTTGCAAGATTCT 59.702 45.455 0.00 0.00 31.35 2.40
47 48 2.680577 CCAGCTTGGTTTGCAAGATTC 58.319 47.619 0.00 0.00 31.35 2.52
48 49 2.825861 CCAGCTTGGTTTGCAAGATT 57.174 45.000 0.00 0.00 31.35 2.40
59 60 2.002586 CGTCAATAGACACCAGCTTGG 58.997 52.381 1.16 1.16 45.23 3.61
60 61 2.002586 CCGTCAATAGACACCAGCTTG 58.997 52.381 0.00 0.00 45.23 4.01
61 62 1.676014 GCCGTCAATAGACACCAGCTT 60.676 52.381 0.00 0.00 45.23 3.74
62 63 0.108138 GCCGTCAATAGACACCAGCT 60.108 55.000 0.00 0.00 45.23 4.24
63 64 0.391130 TGCCGTCAATAGACACCAGC 60.391 55.000 0.00 0.00 45.23 4.85
64 65 2.002586 CTTGCCGTCAATAGACACCAG 58.997 52.381 0.00 0.00 45.23 4.00
65 66 1.621317 TCTTGCCGTCAATAGACACCA 59.379 47.619 0.00 0.00 45.23 4.17
66 67 2.000447 GTCTTGCCGTCAATAGACACC 59.000 52.381 0.00 0.00 45.23 4.16
67 68 2.683968 TGTCTTGCCGTCAATAGACAC 58.316 47.619 0.00 0.00 45.23 3.67
68 69 3.064207 GTTGTCTTGCCGTCAATAGACA 58.936 45.455 0.00 0.00 45.23 3.41
69 70 3.326747 AGTTGTCTTGCCGTCAATAGAC 58.673 45.455 0.00 0.00 41.46 2.59
70 71 3.585862 GAGTTGTCTTGCCGTCAATAGA 58.414 45.455 0.00 0.00 0.00 1.98
71 72 2.673368 GGAGTTGTCTTGCCGTCAATAG 59.327 50.000 0.00 0.00 0.00 1.73
72 73 2.037902 TGGAGTTGTCTTGCCGTCAATA 59.962 45.455 0.00 0.00 0.00 1.90
73 74 1.202758 TGGAGTTGTCTTGCCGTCAAT 60.203 47.619 0.00 0.00 0.00 2.57
74 75 0.179234 TGGAGTTGTCTTGCCGTCAA 59.821 50.000 0.00 0.00 0.00 3.18
75 76 0.531974 GTGGAGTTGTCTTGCCGTCA 60.532 55.000 0.00 0.00 0.00 4.35
76 77 1.557443 CGTGGAGTTGTCTTGCCGTC 61.557 60.000 0.00 0.00 0.00 4.79
77 78 1.594293 CGTGGAGTTGTCTTGCCGT 60.594 57.895 0.00 0.00 0.00 5.68
78 79 2.317609 CCGTGGAGTTGTCTTGCCG 61.318 63.158 0.00 0.00 0.00 5.69
79 80 1.966451 CCCGTGGAGTTGTCTTGCC 60.966 63.158 0.00 0.00 0.00 4.52
80 81 1.227853 ACCCGTGGAGTTGTCTTGC 60.228 57.895 0.00 0.00 0.00 4.01
81 82 0.105964 TCACCCGTGGAGTTGTCTTG 59.894 55.000 0.00 0.00 0.00 3.02
82 83 0.834612 TTCACCCGTGGAGTTGTCTT 59.165 50.000 0.00 0.00 0.00 3.01
83 84 0.393077 CTTCACCCGTGGAGTTGTCT 59.607 55.000 0.00 0.00 31.50 3.41
84 85 0.602905 CCTTCACCCGTGGAGTTGTC 60.603 60.000 2.51 0.00 34.33 3.18
85 86 1.342672 ACCTTCACCCGTGGAGTTGT 61.343 55.000 2.51 0.00 34.33 3.32
86 87 0.682852 TACCTTCACCCGTGGAGTTG 59.317 55.000 2.51 0.00 34.33 3.16
87 88 0.683412 GTACCTTCACCCGTGGAGTT 59.317 55.000 2.51 0.00 34.33 3.01
88 89 1.530013 CGTACCTTCACCCGTGGAGT 61.530 60.000 2.51 0.00 34.33 3.85
89 90 1.214589 CGTACCTTCACCCGTGGAG 59.785 63.158 0.00 0.00 35.94 3.86
90 91 1.114722 AACGTACCTTCACCCGTGGA 61.115 55.000 0.00 0.00 33.22 4.02
91 92 0.947180 CAACGTACCTTCACCCGTGG 60.947 60.000 0.00 0.00 33.22 4.94
92 93 0.947180 CCAACGTACCTTCACCCGTG 60.947 60.000 0.00 0.00 33.22 4.94
93 94 1.114722 TCCAACGTACCTTCACCCGT 61.115 55.000 0.00 0.00 34.56 5.28
94 95 0.248289 ATCCAACGTACCTTCACCCG 59.752 55.000 0.00 0.00 0.00 5.28
95 96 2.159000 CCTATCCAACGTACCTTCACCC 60.159 54.545 0.00 0.00 0.00 4.61
96 97 2.159000 CCCTATCCAACGTACCTTCACC 60.159 54.545 0.00 0.00 0.00 4.02
97 98 2.740904 GCCCTATCCAACGTACCTTCAC 60.741 54.545 0.00 0.00 0.00 3.18
98 99 1.483415 GCCCTATCCAACGTACCTTCA 59.517 52.381 0.00 0.00 0.00 3.02
99 100 1.537562 CGCCCTATCCAACGTACCTTC 60.538 57.143 0.00 0.00 0.00 3.46
100 101 0.462789 CGCCCTATCCAACGTACCTT 59.537 55.000 0.00 0.00 0.00 3.50
101 102 0.396139 TCGCCCTATCCAACGTACCT 60.396 55.000 0.00 0.00 0.00 3.08
102 103 0.249197 GTCGCCCTATCCAACGTACC 60.249 60.000 0.00 0.00 0.00 3.34
103 104 0.249197 GGTCGCCCTATCCAACGTAC 60.249 60.000 0.00 0.00 0.00 3.67
104 105 0.683828 TGGTCGCCCTATCCAACGTA 60.684 55.000 0.00 0.00 0.00 3.57
105 106 1.546589 TTGGTCGCCCTATCCAACGT 61.547 55.000 0.00 0.00 36.48 3.99
106 107 0.179056 ATTGGTCGCCCTATCCAACG 60.179 55.000 0.00 0.00 42.75 4.10
107 108 1.134220 TCATTGGTCGCCCTATCCAAC 60.134 52.381 0.00 0.00 42.75 3.77
108 109 1.208706 TCATTGGTCGCCCTATCCAA 58.791 50.000 0.00 0.00 43.83 3.53
109 110 1.072173 CATCATTGGTCGCCCTATCCA 59.928 52.381 0.00 0.00 0.00 3.41
110 111 1.813513 CATCATTGGTCGCCCTATCC 58.186 55.000 0.00 0.00 0.00 2.59
111 112 1.160137 GCATCATTGGTCGCCCTATC 58.840 55.000 0.00 0.00 0.00 2.08
112 113 0.473755 TGCATCATTGGTCGCCCTAT 59.526 50.000 0.00 0.00 0.00 2.57
113 114 0.473755 ATGCATCATTGGTCGCCCTA 59.526 50.000 0.00 0.00 0.00 3.53
114 115 1.105167 CATGCATCATTGGTCGCCCT 61.105 55.000 0.00 0.00 0.00 5.19
115 116 1.102809 TCATGCATCATTGGTCGCCC 61.103 55.000 0.00 0.00 0.00 6.13
116 117 0.956633 ATCATGCATCATTGGTCGCC 59.043 50.000 0.00 0.00 0.00 5.54
117 118 2.810274 AGTATCATGCATCATTGGTCGC 59.190 45.455 0.00 0.00 0.00 5.19
118 119 4.319984 CCAAGTATCATGCATCATTGGTCG 60.320 45.833 0.00 0.00 32.82 4.79
119 120 4.022589 CCCAAGTATCATGCATCATTGGTC 60.023 45.833 17.17 0.00 35.11 4.02
120 121 3.893200 CCCAAGTATCATGCATCATTGGT 59.107 43.478 17.17 1.21 35.11 3.67
121 122 4.146564 TCCCAAGTATCATGCATCATTGG 58.853 43.478 13.91 13.91 36.35 3.16
122 123 5.533528 TCTTCCCAAGTATCATGCATCATTG 59.466 40.000 0.00 0.00 0.00 2.82
123 124 5.698104 TCTTCCCAAGTATCATGCATCATT 58.302 37.500 0.00 0.00 0.00 2.57
124 125 5.314718 TCTTCCCAAGTATCATGCATCAT 57.685 39.130 0.00 0.00 0.00 2.45
125 126 4.776435 TCTTCCCAAGTATCATGCATCA 57.224 40.909 0.00 0.00 0.00 3.07
126 127 4.023365 GCTTCTTCCCAAGTATCATGCATC 60.023 45.833 0.00 0.00 0.00 3.91
127 128 3.887716 GCTTCTTCCCAAGTATCATGCAT 59.112 43.478 0.00 0.00 0.00 3.96
128 129 3.282021 GCTTCTTCCCAAGTATCATGCA 58.718 45.455 0.00 0.00 0.00 3.96
129 130 2.620585 GGCTTCTTCCCAAGTATCATGC 59.379 50.000 0.00 0.00 0.00 4.06
130 131 4.162040 AGGCTTCTTCCCAAGTATCATG 57.838 45.455 0.00 0.00 0.00 3.07
131 132 4.870021 AAGGCTTCTTCCCAAGTATCAT 57.130 40.909 0.00 0.00 0.00 2.45
132 133 4.202567 ACAAAGGCTTCTTCCCAAGTATCA 60.203 41.667 0.00 0.00 0.00 2.15
133 134 4.336280 ACAAAGGCTTCTTCCCAAGTATC 58.664 43.478 0.00 0.00 0.00 2.24
134 135 4.388577 ACAAAGGCTTCTTCCCAAGTAT 57.611 40.909 0.00 0.00 0.00 2.12
135 136 3.876309 ACAAAGGCTTCTTCCCAAGTA 57.124 42.857 0.00 0.00 0.00 2.24
136 137 2.755952 ACAAAGGCTTCTTCCCAAGT 57.244 45.000 0.00 0.00 0.00 3.16
137 138 3.005155 CAGAACAAAGGCTTCTTCCCAAG 59.995 47.826 0.00 0.00 0.00 3.61
138 139 2.958355 CAGAACAAAGGCTTCTTCCCAA 59.042 45.455 0.00 0.00 0.00 4.12
139 140 2.586425 CAGAACAAAGGCTTCTTCCCA 58.414 47.619 0.00 0.00 0.00 4.37
140 141 1.270826 GCAGAACAAAGGCTTCTTCCC 59.729 52.381 0.00 0.00 0.00 3.97
141 142 1.956477 TGCAGAACAAAGGCTTCTTCC 59.044 47.619 0.00 0.00 0.00 3.46
142 143 3.254166 TGATGCAGAACAAAGGCTTCTTC 59.746 43.478 0.00 4.88 34.09 2.87
143 144 3.225104 TGATGCAGAACAAAGGCTTCTT 58.775 40.909 0.00 0.00 34.09 2.52
144 145 2.818432 CTGATGCAGAACAAAGGCTTCT 59.182 45.455 0.00 0.00 34.09 2.85
145 146 2.670509 GCTGATGCAGAACAAAGGCTTC 60.671 50.000 0.00 0.00 39.41 3.86
146 147 1.271656 GCTGATGCAGAACAAAGGCTT 59.728 47.619 0.00 0.00 39.41 4.35
147 148 0.886563 GCTGATGCAGAACAAAGGCT 59.113 50.000 0.00 0.00 39.41 4.58
148 149 0.455633 CGCTGATGCAGAACAAAGGC 60.456 55.000 0.00 0.00 39.64 4.35
149 150 0.877071 ACGCTGATGCAGAACAAAGG 59.123 50.000 0.00 0.00 39.64 3.11
150 151 2.693797 AACGCTGATGCAGAACAAAG 57.306 45.000 0.00 0.00 39.64 2.77
151 152 3.371168 GAAAACGCTGATGCAGAACAAA 58.629 40.909 0.00 0.00 39.64 2.83
152 153 2.287547 GGAAAACGCTGATGCAGAACAA 60.288 45.455 0.00 0.00 39.64 2.83
153 154 1.266718 GGAAAACGCTGATGCAGAACA 59.733 47.619 0.00 0.00 39.64 3.18
154 155 1.537202 AGGAAAACGCTGATGCAGAAC 59.463 47.619 0.00 0.00 39.64 3.01
155 156 1.806542 GAGGAAAACGCTGATGCAGAA 59.193 47.619 0.00 0.00 39.64 3.02
156 157 1.002430 AGAGGAAAACGCTGATGCAGA 59.998 47.619 0.00 0.00 39.64 4.26
157 158 1.446907 AGAGGAAAACGCTGATGCAG 58.553 50.000 0.00 0.00 39.64 4.41
158 159 2.028112 AGTAGAGGAAAACGCTGATGCA 60.028 45.455 0.00 0.00 39.64 3.96
159 160 2.349886 CAGTAGAGGAAAACGCTGATGC 59.650 50.000 0.00 0.00 0.00 3.91
160 161 3.589988 ACAGTAGAGGAAAACGCTGATG 58.410 45.455 0.00 0.00 0.00 3.07
161 162 3.673594 CGACAGTAGAGGAAAACGCTGAT 60.674 47.826 0.00 0.00 0.00 2.90
162 163 2.351447 CGACAGTAGAGGAAAACGCTGA 60.351 50.000 0.00 0.00 0.00 4.26
163 164 1.986378 CGACAGTAGAGGAAAACGCTG 59.014 52.381 0.00 0.00 0.00 5.18
164 165 1.884579 TCGACAGTAGAGGAAAACGCT 59.115 47.619 0.00 0.00 0.00 5.07
165 166 1.984297 GTCGACAGTAGAGGAAAACGC 59.016 52.381 11.55 0.00 0.00 4.84
166 167 3.555917 AGTCGACAGTAGAGGAAAACG 57.444 47.619 19.50 0.00 0.00 3.60
167 168 3.988517 CCAAGTCGACAGTAGAGGAAAAC 59.011 47.826 19.50 0.00 0.00 2.43
168 169 3.006537 CCCAAGTCGACAGTAGAGGAAAA 59.993 47.826 19.50 0.00 0.00 2.29
169 170 2.561419 CCCAAGTCGACAGTAGAGGAAA 59.439 50.000 19.50 0.00 0.00 3.13
170 171 2.168496 CCCAAGTCGACAGTAGAGGAA 58.832 52.381 19.50 0.00 0.00 3.36
171 172 1.616187 CCCCAAGTCGACAGTAGAGGA 60.616 57.143 19.50 0.00 0.00 3.71
172 173 0.818296 CCCCAAGTCGACAGTAGAGG 59.182 60.000 19.50 9.00 0.00 3.69
173 174 0.818296 CCCCCAAGTCGACAGTAGAG 59.182 60.000 19.50 1.41 0.00 2.43
174 175 1.255667 GCCCCCAAGTCGACAGTAGA 61.256 60.000 19.50 0.00 0.00 2.59
175 176 1.218316 GCCCCCAAGTCGACAGTAG 59.782 63.158 19.50 3.48 0.00 2.57
176 177 1.122632 TTGCCCCCAAGTCGACAGTA 61.123 55.000 19.50 0.00 0.00 2.74
177 178 2.397413 CTTGCCCCCAAGTCGACAGT 62.397 60.000 19.50 1.54 42.76 3.55
178 179 1.672356 CTTGCCCCCAAGTCGACAG 60.672 63.158 19.50 9.72 42.76 3.51
179 180 2.429930 CTTGCCCCCAAGTCGACA 59.570 61.111 19.50 0.00 42.76 4.35
192 193 1.743252 CCCTTGAGAGGCGACTTGC 60.743 63.158 0.00 0.00 44.43 4.01
193 194 1.078848 CCCCTTGAGAGGCGACTTG 60.079 63.158 0.00 0.00 44.43 3.16
194 195 0.252103 TACCCCTTGAGAGGCGACTT 60.252 55.000 0.00 0.00 44.43 3.01
196 197 1.677637 CCTACCCCTTGAGAGGCGAC 61.678 65.000 0.00 0.00 42.09 5.19
197 198 1.381327 CCTACCCCTTGAGAGGCGA 60.381 63.158 0.00 0.00 42.09 5.54
198 199 2.435693 CCCTACCCCTTGAGAGGCG 61.436 68.421 0.00 0.00 42.09 5.52
199 200 0.620700 TTCCCTACCCCTTGAGAGGC 60.621 60.000 0.00 0.00 42.09 4.70
200 201 1.771255 CATTCCCTACCCCTTGAGAGG 59.229 57.143 0.00 0.00 43.15 3.69
201 202 2.436173 GACATTCCCTACCCCTTGAGAG 59.564 54.545 0.00 0.00 0.00 3.20
202 203 2.225779 TGACATTCCCTACCCCTTGAGA 60.226 50.000 0.00 0.00 0.00 3.27
203 204 2.196595 TGACATTCCCTACCCCTTGAG 58.803 52.381 0.00 0.00 0.00 3.02
204 205 2.352561 TGACATTCCCTACCCCTTGA 57.647 50.000 0.00 0.00 0.00 3.02
205 206 2.423373 CCATGACATTCCCTACCCCTTG 60.423 54.545 0.00 0.00 0.00 3.61
206 207 1.852965 CCATGACATTCCCTACCCCTT 59.147 52.381 0.00 0.00 0.00 3.95
207 208 1.522900 CCATGACATTCCCTACCCCT 58.477 55.000 0.00 0.00 0.00 4.79
208 209 0.178990 GCCATGACATTCCCTACCCC 60.179 60.000 0.00 0.00 0.00 4.95
209 210 0.550914 TGCCATGACATTCCCTACCC 59.449 55.000 0.00 0.00 0.00 3.69
210 211 1.680338 GTGCCATGACATTCCCTACC 58.320 55.000 0.00 0.00 0.00 3.18
211 212 1.299541 CGTGCCATGACATTCCCTAC 58.700 55.000 0.00 0.00 0.00 3.18
212 213 0.180171 CCGTGCCATGACATTCCCTA 59.820 55.000 0.00 0.00 0.00 3.53
213 214 1.077501 CCGTGCCATGACATTCCCT 60.078 57.895 0.00 0.00 0.00 4.20
214 215 2.774799 GCCGTGCCATGACATTCCC 61.775 63.158 0.00 0.00 0.00 3.97
215 216 2.800736 GCCGTGCCATGACATTCC 59.199 61.111 0.00 0.00 0.00 3.01
227 228 4.767255 GTCCTGAGCTGGGCCGTG 62.767 72.222 0.00 0.00 0.00 4.94
231 232 4.154347 CTCCGTCCTGAGCTGGGC 62.154 72.222 0.00 0.00 0.00 5.36
232 233 3.465403 CCTCCGTCCTGAGCTGGG 61.465 72.222 0.00 0.00 0.00 4.45
233 234 4.154347 GCCTCCGTCCTGAGCTGG 62.154 72.222 0.00 0.00 0.00 4.85
234 235 4.154347 GGCCTCCGTCCTGAGCTG 62.154 72.222 0.00 0.00 0.00 4.24
237 238 3.003173 TTGGGCCTCCGTCCTGAG 61.003 66.667 4.53 0.00 35.24 3.35
238 239 3.003173 CTTGGGCCTCCGTCCTGA 61.003 66.667 4.53 0.00 35.24 3.86
239 240 4.101448 CCTTGGGCCTCCGTCCTG 62.101 72.222 4.53 0.00 35.24 3.86
260 261 2.094659 AATCTCCTGTTGCGTCGCG 61.095 57.895 13.38 0.00 0.00 5.87
261 262 1.421485 CAATCTCCTGTTGCGTCGC 59.579 57.895 11.10 11.10 0.00 5.19
262 263 1.970917 GCCAATCTCCTGTTGCGTCG 61.971 60.000 0.00 0.00 0.00 5.12
263 264 0.674895 AGCCAATCTCCTGTTGCGTC 60.675 55.000 0.00 0.00 0.00 5.19
264 265 0.674895 GAGCCAATCTCCTGTTGCGT 60.675 55.000 0.00 0.00 35.77 5.24
265 266 1.699656 CGAGCCAATCTCCTGTTGCG 61.700 60.000 0.00 0.00 38.62 4.85
266 267 0.391661 TCGAGCCAATCTCCTGTTGC 60.392 55.000 0.00 0.00 38.62 4.17
267 268 1.649664 CTCGAGCCAATCTCCTGTTG 58.350 55.000 0.00 0.00 38.62 3.33
268 269 0.107945 GCTCGAGCCAATCTCCTGTT 60.108 55.000 27.22 0.00 38.62 3.16
269 270 1.519719 GCTCGAGCCAATCTCCTGT 59.480 57.895 27.22 0.00 38.62 4.00
270 271 1.591059 CGCTCGAGCCAATCTCCTG 60.591 63.158 30.66 10.21 38.62 3.86
271 272 1.608717 AACGCTCGAGCCAATCTCCT 61.609 55.000 30.66 4.27 38.62 3.69
272 273 1.148759 GAACGCTCGAGCCAATCTCC 61.149 60.000 30.66 9.90 38.62 3.71
273 274 2.292803 GAACGCTCGAGCCAATCTC 58.707 57.895 30.66 15.81 37.91 2.75
274 275 4.504132 GAACGCTCGAGCCAATCT 57.496 55.556 30.66 11.17 37.91 2.40
287 288 3.636313 TTACGCTGGGCCTCGAACG 62.636 63.158 21.80 12.73 0.00 3.95
288 289 1.810030 CTTACGCTGGGCCTCGAAC 60.810 63.158 21.80 0.00 0.00 3.95
289 290 2.577059 CTTACGCTGGGCCTCGAA 59.423 61.111 21.80 12.15 0.00 3.71
290 291 3.458163 CCTTACGCTGGGCCTCGA 61.458 66.667 21.80 6.36 0.00 4.04
291 292 3.432051 CTCCTTACGCTGGGCCTCG 62.432 68.421 15.25 15.25 0.00 4.63
292 293 2.501610 CTCCTTACGCTGGGCCTC 59.498 66.667 4.53 0.00 0.00 4.70
293 294 3.083997 CCTCCTTACGCTGGGCCT 61.084 66.667 4.53 0.00 0.00 5.19
294 295 4.176752 CCCTCCTTACGCTGGGCC 62.177 72.222 0.00 0.00 32.49 5.80
295 296 1.984288 ATTCCCTCCTTACGCTGGGC 61.984 60.000 0.00 0.00 39.49 5.36
296 297 0.546598 AATTCCCTCCTTACGCTGGG 59.453 55.000 0.00 0.00 40.95 4.45
297 298 1.486726 AGAATTCCCTCCTTACGCTGG 59.513 52.381 0.65 0.00 0.00 4.85
298 299 2.990066 AGAATTCCCTCCTTACGCTG 57.010 50.000 0.65 0.00 0.00 5.18
299 300 2.966516 CCTAGAATTCCCTCCTTACGCT 59.033 50.000 0.65 0.00 0.00 5.07
300 301 2.548280 GCCTAGAATTCCCTCCTTACGC 60.548 54.545 0.65 0.00 0.00 4.42
301 302 2.698797 TGCCTAGAATTCCCTCCTTACG 59.301 50.000 0.65 0.00 0.00 3.18
302 303 3.492829 CGTGCCTAGAATTCCCTCCTTAC 60.493 52.174 0.65 0.00 0.00 2.34
303 304 2.698797 CGTGCCTAGAATTCCCTCCTTA 59.301 50.000 0.65 0.00 0.00 2.69
304 305 1.486726 CGTGCCTAGAATTCCCTCCTT 59.513 52.381 0.65 0.00 0.00 3.36
305 306 1.123928 CGTGCCTAGAATTCCCTCCT 58.876 55.000 0.65 0.00 0.00 3.69
306 307 0.106894 CCGTGCCTAGAATTCCCTCC 59.893 60.000 0.65 0.00 0.00 4.30
307 308 0.533085 GCCGTGCCTAGAATTCCCTC 60.533 60.000 0.65 0.00 0.00 4.30
308 309 1.271840 TGCCGTGCCTAGAATTCCCT 61.272 55.000 0.65 0.00 0.00 4.20
309 310 0.393808 TTGCCGTGCCTAGAATTCCC 60.394 55.000 0.65 0.00 0.00 3.97
310 311 1.017387 CTTGCCGTGCCTAGAATTCC 58.983 55.000 0.65 0.00 0.00 3.01
311 312 0.378610 GCTTGCCGTGCCTAGAATTC 59.621 55.000 0.00 0.00 0.00 2.17
312 313 0.322456 TGCTTGCCGTGCCTAGAATT 60.322 50.000 0.00 0.00 0.00 2.17
313 314 0.745845 CTGCTTGCCGTGCCTAGAAT 60.746 55.000 0.00 0.00 0.00 2.40
314 315 1.375908 CTGCTTGCCGTGCCTAGAA 60.376 57.895 0.00 0.00 0.00 2.10
315 316 2.265739 CTGCTTGCCGTGCCTAGA 59.734 61.111 0.00 0.00 0.00 2.43
316 317 3.503363 GCTGCTTGCCGTGCCTAG 61.503 66.667 0.00 0.00 35.15 3.02
317 318 3.958147 GAGCTGCTTGCCGTGCCTA 62.958 63.158 2.53 0.00 44.23 3.93
320 321 4.099170 CTGAGCTGCTTGCCGTGC 62.099 66.667 2.53 0.00 44.23 5.34
321 322 4.099170 GCTGAGCTGCTTGCCGTG 62.099 66.667 2.53 0.00 44.23 4.94
322 323 2.249413 ATAGCTGAGCTGCTTGCCGT 62.249 55.000 18.79 9.89 43.74 5.68
323 324 0.249615 TATAGCTGAGCTGCTTGCCG 60.250 55.000 18.79 4.96 43.74 5.69
324 325 1.805345 CATATAGCTGAGCTGCTTGCC 59.195 52.381 18.79 2.90 43.74 4.52
325 326 2.737783 CTCATATAGCTGAGCTGCTTGC 59.262 50.000 18.79 17.00 43.74 4.01
326 327 3.006644 TCCTCATATAGCTGAGCTGCTTG 59.993 47.826 18.79 11.24 43.74 4.01
327 328 3.237746 TCCTCATATAGCTGAGCTGCTT 58.762 45.455 18.79 4.39 43.74 3.91
328 329 2.827322 CTCCTCATATAGCTGAGCTGCT 59.173 50.000 18.79 0.00 46.11 4.24
329 330 2.824936 TCTCCTCATATAGCTGAGCTGC 59.175 50.000 18.79 0.00 41.12 5.25
330 331 5.185442 TGAATCTCCTCATATAGCTGAGCTG 59.815 44.000 18.79 0.33 41.12 4.24
331 332 5.331906 TGAATCTCCTCATATAGCTGAGCT 58.668 41.667 13.25 13.25 41.12 4.09
332 333 5.418524 TCTGAATCTCCTCATATAGCTGAGC 59.581 44.000 0.00 0.00 41.12 4.26
333 334 6.885918 TCTCTGAATCTCCTCATATAGCTGAG 59.114 42.308 0.00 0.00 41.93 3.35
334 335 6.788218 TCTCTGAATCTCCTCATATAGCTGA 58.212 40.000 0.00 0.00 0.00 4.26
335 336 6.095860 CCTCTCTGAATCTCCTCATATAGCTG 59.904 46.154 0.00 0.00 0.00 4.24
336 337 6.011717 TCCTCTCTGAATCTCCTCATATAGCT 60.012 42.308 0.00 0.00 0.00 3.32
337 338 6.186957 TCCTCTCTGAATCTCCTCATATAGC 58.813 44.000 0.00 0.00 0.00 2.97
338 339 7.632861 TCTCCTCTCTGAATCTCCTCATATAG 58.367 42.308 0.00 0.00 0.00 1.31
339 340 7.581424 TCTCCTCTCTGAATCTCCTCATATA 57.419 40.000 0.00 0.00 0.00 0.86
340 341 6.467490 TCTCCTCTCTGAATCTCCTCATAT 57.533 41.667 0.00 0.00 0.00 1.78
341 342 5.921153 TCTCCTCTCTGAATCTCCTCATA 57.079 43.478 0.00 0.00 0.00 2.15
342 343 4.812403 TCTCCTCTCTGAATCTCCTCAT 57.188 45.455 0.00 0.00 0.00 2.90
343 344 4.264128 TGTTCTCCTCTCTGAATCTCCTCA 60.264 45.833 0.00 0.00 0.00 3.86
344 345 4.097892 GTGTTCTCCTCTCTGAATCTCCTC 59.902 50.000 0.00 0.00 0.00 3.71
345 346 4.023291 GTGTTCTCCTCTCTGAATCTCCT 58.977 47.826 0.00 0.00 0.00 3.69
346 347 3.181491 CGTGTTCTCCTCTCTGAATCTCC 60.181 52.174 0.00 0.00 0.00 3.71
347 348 3.181491 CCGTGTTCTCCTCTCTGAATCTC 60.181 52.174 0.00 0.00 0.00 2.75
348 349 2.757868 CCGTGTTCTCCTCTCTGAATCT 59.242 50.000 0.00 0.00 0.00 2.40
349 350 2.159170 CCCGTGTTCTCCTCTCTGAATC 60.159 54.545 0.00 0.00 0.00 2.52
350 351 1.827969 CCCGTGTTCTCCTCTCTGAAT 59.172 52.381 0.00 0.00 0.00 2.57
351 352 1.257743 CCCGTGTTCTCCTCTCTGAA 58.742 55.000 0.00 0.00 0.00 3.02
352 353 0.612174 CCCCGTGTTCTCCTCTCTGA 60.612 60.000 0.00 0.00 0.00 3.27
353 354 1.608717 CCCCCGTGTTCTCCTCTCTG 61.609 65.000 0.00 0.00 0.00 3.35
354 355 1.305381 CCCCCGTGTTCTCCTCTCT 60.305 63.158 0.00 0.00 0.00 3.10
355 356 3.300013 CCCCCGTGTTCTCCTCTC 58.700 66.667 0.00 0.00 0.00 3.20
369 370 1.271982 GGTTCCAGTCTTTTCTCCCCC 60.272 57.143 0.00 0.00 0.00 5.40
370 371 1.705745 AGGTTCCAGTCTTTTCTCCCC 59.294 52.381 0.00 0.00 0.00 4.81
371 372 3.838903 TCTAGGTTCCAGTCTTTTCTCCC 59.161 47.826 0.00 0.00 0.00 4.30
372 373 5.395879 GGATCTAGGTTCCAGTCTTTTCTCC 60.396 48.000 7.53 0.00 33.21 3.71
373 374 5.423931 AGGATCTAGGTTCCAGTCTTTTCTC 59.576 44.000 13.19 0.00 35.59 2.87
374 375 5.346270 AGGATCTAGGTTCCAGTCTTTTCT 58.654 41.667 13.19 0.00 35.59 2.52
375 376 5.666462 GAGGATCTAGGTTCCAGTCTTTTC 58.334 45.833 13.19 0.01 35.59 2.29
376 377 5.685520 GAGGATCTAGGTTCCAGTCTTTT 57.314 43.478 13.19 0.00 35.59 2.27
392 393 6.269769 AGGGAAAATGATACAGAGAGAGGATC 59.730 42.308 0.00 0.00 0.00 3.36
393 394 6.149616 AGGGAAAATGATACAGAGAGAGGAT 58.850 40.000 0.00 0.00 0.00 3.24
394 395 5.533112 AGGGAAAATGATACAGAGAGAGGA 58.467 41.667 0.00 0.00 0.00 3.71
395 396 5.602145 AGAGGGAAAATGATACAGAGAGAGG 59.398 44.000 0.00 0.00 0.00 3.69
396 397 6.729690 AGAGGGAAAATGATACAGAGAGAG 57.270 41.667 0.00 0.00 0.00 3.20
397 398 6.900186 AGAAGAGGGAAAATGATACAGAGAGA 59.100 38.462 0.00 0.00 0.00 3.10
398 399 7.123355 AGAAGAGGGAAAATGATACAGAGAG 57.877 40.000 0.00 0.00 0.00 3.20
399 400 6.098982 GGAGAAGAGGGAAAATGATACAGAGA 59.901 42.308 0.00 0.00 0.00 3.10
400 401 6.099557 AGGAGAAGAGGGAAAATGATACAGAG 59.900 42.308 0.00 0.00 0.00 3.35
401 402 5.966935 AGGAGAAGAGGGAAAATGATACAGA 59.033 40.000 0.00 0.00 0.00 3.41
402 403 6.245890 AGGAGAAGAGGGAAAATGATACAG 57.754 41.667 0.00 0.00 0.00 2.74
403 404 6.099845 GGTAGGAGAAGAGGGAAAATGATACA 59.900 42.308 0.00 0.00 0.00 2.29
404 405 6.327887 AGGTAGGAGAAGAGGGAAAATGATAC 59.672 42.308 0.00 0.00 0.00 2.24
405 406 6.453476 AGGTAGGAGAAGAGGGAAAATGATA 58.547 40.000 0.00 0.00 0.00 2.15
406 407 5.292815 AGGTAGGAGAAGAGGGAAAATGAT 58.707 41.667 0.00 0.00 0.00 2.45
407 408 4.699994 AGGTAGGAGAAGAGGGAAAATGA 58.300 43.478 0.00 0.00 0.00 2.57
408 409 4.719273 AGAGGTAGGAGAAGAGGGAAAATG 59.281 45.833 0.00 0.00 0.00 2.32
409 410 4.719273 CAGAGGTAGGAGAAGAGGGAAAAT 59.281 45.833 0.00 0.00 0.00 1.82
410 411 4.097418 CAGAGGTAGGAGAAGAGGGAAAA 58.903 47.826 0.00 0.00 0.00 2.29
411 412 3.714144 CAGAGGTAGGAGAAGAGGGAAA 58.286 50.000 0.00 0.00 0.00 3.13
412 413 2.624557 GCAGAGGTAGGAGAAGAGGGAA 60.625 54.545 0.00 0.00 0.00 3.97
413 414 1.063567 GCAGAGGTAGGAGAAGAGGGA 60.064 57.143 0.00 0.00 0.00 4.20
414 415 1.408969 GCAGAGGTAGGAGAAGAGGG 58.591 60.000 0.00 0.00 0.00 4.30
415 416 1.408969 GGCAGAGGTAGGAGAAGAGG 58.591 60.000 0.00 0.00 0.00 3.69
416 417 1.342474 TGGGCAGAGGTAGGAGAAGAG 60.342 57.143 0.00 0.00 0.00 2.85
417 418 0.710588 TGGGCAGAGGTAGGAGAAGA 59.289 55.000 0.00 0.00 0.00 2.87
418 419 1.799933 ATGGGCAGAGGTAGGAGAAG 58.200 55.000 0.00 0.00 0.00 2.85
419 420 3.414759 TTATGGGCAGAGGTAGGAGAA 57.585 47.619 0.00 0.00 0.00 2.87
420 421 3.414759 TTTATGGGCAGAGGTAGGAGA 57.585 47.619 0.00 0.00 0.00 3.71
421 422 4.141390 ACAATTTATGGGCAGAGGTAGGAG 60.141 45.833 0.00 0.00 0.00 3.69
422 423 3.785887 ACAATTTATGGGCAGAGGTAGGA 59.214 43.478 0.00 0.00 0.00 2.94
423 424 4.170468 ACAATTTATGGGCAGAGGTAGG 57.830 45.455 0.00 0.00 0.00 3.18
424 425 6.652481 CAGATACAATTTATGGGCAGAGGTAG 59.348 42.308 0.00 0.00 0.00 3.18
425 426 6.328934 TCAGATACAATTTATGGGCAGAGGTA 59.671 38.462 0.00 0.00 0.00 3.08
426 427 5.132648 TCAGATACAATTTATGGGCAGAGGT 59.867 40.000 0.00 0.00 0.00 3.85
427 428 5.624159 TCAGATACAATTTATGGGCAGAGG 58.376 41.667 0.00 0.00 0.00 3.69
428 429 7.756395 ATTCAGATACAATTTATGGGCAGAG 57.244 36.000 0.00 0.00 0.00 3.35
429 430 7.560991 ACAATTCAGATACAATTTATGGGCAGA 59.439 33.333 0.00 0.00 0.00 4.26
430 431 7.719483 ACAATTCAGATACAATTTATGGGCAG 58.281 34.615 0.00 0.00 0.00 4.85
431 432 7.658525 ACAATTCAGATACAATTTATGGGCA 57.341 32.000 0.00 0.00 0.00 5.36
432 433 9.846248 GATACAATTCAGATACAATTTATGGGC 57.154 33.333 0.00 0.00 0.00 5.36
441 442 9.383519 GTTCTTCCTGATACAATTCAGATACAA 57.616 33.333 3.10 0.00 44.88 2.41
442 443 7.987458 GGTTCTTCCTGATACAATTCAGATACA 59.013 37.037 3.10 0.00 44.88 2.29
443 444 8.207545 AGGTTCTTCCTGATACAATTCAGATAC 58.792 37.037 3.10 0.00 46.19 2.24
444 445 8.324191 AGGTTCTTCCTGATACAATTCAGATA 57.676 34.615 3.10 0.00 46.19 1.98
445 446 7.205515 AGGTTCTTCCTGATACAATTCAGAT 57.794 36.000 3.10 0.00 46.19 2.90
446 447 6.627087 AGGTTCTTCCTGATACAATTCAGA 57.373 37.500 3.10 0.00 46.19 3.27
460 461 2.306219 AGCTAGGGTTCAAGGTTCTTCC 59.694 50.000 0.00 0.00 0.00 3.46
461 462 3.339141 CAGCTAGGGTTCAAGGTTCTTC 58.661 50.000 0.00 0.00 0.00 2.87
462 463 2.040412 CCAGCTAGGGTTCAAGGTTCTT 59.960 50.000 0.00 0.00 0.00 2.52
463 464 1.630878 CCAGCTAGGGTTCAAGGTTCT 59.369 52.381 0.00 0.00 0.00 3.01
464 465 1.351350 ACCAGCTAGGGTTCAAGGTTC 59.649 52.381 7.06 0.00 43.89 3.62
465 466 1.446016 ACCAGCTAGGGTTCAAGGTT 58.554 50.000 7.06 0.00 43.89 3.50
466 467 3.182105 ACCAGCTAGGGTTCAAGGT 57.818 52.632 7.06 0.00 43.89 3.50
473 474 2.910319 TGTGTTATGAACCAGCTAGGGT 59.090 45.455 7.06 0.00 43.33 4.34
474 475 3.627395 TGTGTTATGAACCAGCTAGGG 57.373 47.619 7.06 0.00 43.89 3.53
475 476 3.879295 CCATGTGTTATGAACCAGCTAGG 59.121 47.826 0.00 0.00 45.67 3.02
476 477 3.313526 GCCATGTGTTATGAACCAGCTAG 59.686 47.826 0.00 0.00 0.00 3.42
477 478 3.278574 GCCATGTGTTATGAACCAGCTA 58.721 45.455 0.00 0.00 0.00 3.32
478 479 2.094675 GCCATGTGTTATGAACCAGCT 58.905 47.619 0.00 0.00 0.00 4.24
479 480 1.818060 TGCCATGTGTTATGAACCAGC 59.182 47.619 0.00 0.00 0.00 4.85
480 481 3.084039 AGTGCCATGTGTTATGAACCAG 58.916 45.455 0.00 0.00 0.00 4.00
481 482 2.819019 CAGTGCCATGTGTTATGAACCA 59.181 45.455 0.00 0.00 0.00 3.67
482 483 2.415893 GCAGTGCCATGTGTTATGAACC 60.416 50.000 2.85 0.00 0.00 3.62
483 484 2.867429 GCAGTGCCATGTGTTATGAAC 58.133 47.619 2.85 0.00 0.00 3.18
545 550 6.593268 CCTATAGGTAAGAGAAAGGGCTAC 57.407 45.833 10.96 0.00 0.00 3.58
857 878 2.123897 GTTGCTGGGTGTGGGTGT 60.124 61.111 0.00 0.00 0.00 4.16
858 879 2.912025 GGTTGCTGGGTGTGGGTG 60.912 66.667 0.00 0.00 0.00 4.61
859 880 4.218686 GGGTTGCTGGGTGTGGGT 62.219 66.667 0.00 0.00 0.00 4.51
860 881 4.994756 GGGGTTGCTGGGTGTGGG 62.995 72.222 0.00 0.00 0.00 4.61
861 882 3.747521 TTGGGGTTGCTGGGTGTGG 62.748 63.158 0.00 0.00 0.00 4.17
862 883 1.120795 AATTGGGGTTGCTGGGTGTG 61.121 55.000 0.00 0.00 0.00 3.82
1014 1035 1.070615 GCAGCTAGGCTAGGCTTCC 59.929 63.158 25.37 15.11 36.40 3.46
1028 1049 2.183046 GACCTCACTCCTCGCAGC 59.817 66.667 0.00 0.00 0.00 5.25
1086 1110 3.487417 CTGCTGCTGCTGCTAGTG 58.513 61.111 27.67 13.98 40.48 2.74
1315 1339 4.025401 CAAGGCCGCGTGTTGGTC 62.025 66.667 4.92 0.00 0.00 4.02
1362 1403 4.648626 TGGACACCTGCAGCCAGC 62.649 66.667 8.66 0.00 45.96 4.85
2370 2549 9.683069 CAGCTTTCACTTAATTATCAGTTTTGT 57.317 29.630 0.00 0.00 0.00 2.83
2371 2550 9.897744 TCAGCTTTCACTTAATTATCAGTTTTG 57.102 29.630 0.00 0.00 0.00 2.44
2373 2552 9.066892 TGTCAGCTTTCACTTAATTATCAGTTT 57.933 29.630 0.00 0.00 0.00 2.66
2378 2580 7.433425 GGCAATGTCAGCTTTCACTTAATTATC 59.567 37.037 0.00 0.00 0.00 1.75
2403 2605 0.950836 TGCAGTTTGTCCGAACATGG 59.049 50.000 0.00 0.00 34.73 3.66
2452 2654 5.230182 GGACAATTCTTGAATGGTTTGGTC 58.770 41.667 5.02 0.00 0.00 4.02
2509 2711 5.677319 TTTTGCTACTGTATAGCCTGAGT 57.323 39.130 3.60 0.00 39.69 3.41
2633 2835 4.566837 ACTGGTCCTGGGTATCAATATCA 58.433 43.478 0.33 0.00 0.00 2.15
2743 2945 1.612199 GGTGGTAATTCCCTTGTCGCA 60.612 52.381 0.00 0.00 34.77 5.10
3046 3248 3.881089 TGCAGAGCCATGATAACAATGAG 59.119 43.478 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.