Multiple sequence alignment - TraesCS3A01G153600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G153600 chr3A 100.000 5034 0 0 1 5034 144169245 144164212 0.000000e+00 9297.0
1 TraesCS3A01G153600 chr3D 90.428 4534 255 61 13 4444 131437384 131432928 0.000000e+00 5803.0
2 TraesCS3A01G153600 chr3D 88.153 498 42 10 4550 5034 131359763 131359270 1.220000e-160 577.0
3 TraesCS3A01G153600 chr3B 88.351 3305 232 68 23 3221 187821808 187818551 0.000000e+00 3829.0
4 TraesCS3A01G153600 chr3B 92.700 863 57 3 3349 4207 187818481 187817621 0.000000e+00 1240.0
5 TraesCS3A01G153600 chr3B 85.788 387 36 13 4187 4556 187812328 187811944 4.720000e-105 392.0
6 TraesCS3A01G153600 chr3B 84.030 263 27 8 4551 4800 187811676 187811416 6.510000e-59 239.0
7 TraesCS3A01G153600 chr7D 88.406 69 6 2 3226 3293 398042134 398042067 1.160000e-11 82.4
8 TraesCS3A01G153600 chr4B 94.737 38 2 0 3222 3259 593378455 593378492 5.440000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G153600 chr3A 144164212 144169245 5033 True 9297.0 9297 100.0000 1 5034 1 chr3A.!!$R1 5033
1 TraesCS3A01G153600 chr3D 131432928 131437384 4456 True 5803.0 5803 90.4280 13 4444 1 chr3D.!!$R2 4431
2 TraesCS3A01G153600 chr3B 187817621 187821808 4187 True 2534.5 3829 90.5255 23 4207 2 chr3B.!!$R2 4184
3 TraesCS3A01G153600 chr3B 187811416 187812328 912 True 315.5 392 84.9090 4187 4800 2 chr3B.!!$R1 613

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 338 0.241481 TAATTCGGTGCGTTTTGGGC 59.759 50.0 0.00 0.00 0.00 5.36 F
807 913 0.532573 TCAAGACAGGCATCGAGTCC 59.467 55.0 0.00 0.00 32.82 3.85 F
1088 1202 0.622665 AGCAAAGATGGCAGCTACCT 59.377 50.0 5.34 0.00 35.19 3.08 F
2131 2245 0.686789 GGGCCAAGCTCAAACCAAAT 59.313 50.0 4.39 0.00 0.00 2.32 F
3793 3972 0.603569 GTGATATCGGCGATGGGACT 59.396 55.0 31.08 8.24 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2061 2175 0.107831 AACCAACTTCAGTAGCCGCA 59.892 50.000 0.0 0.0 0.00 5.69 R
2801 2923 1.545428 GGTTCTGTGTCCCAATCAGCA 60.545 52.381 0.0 0.0 0.00 4.41 R
3023 3166 4.377839 TCAGCAGTAGATGTAGCACTTC 57.622 45.455 0.0 0.0 31.77 3.01 R
3993 4172 0.392193 AACAGCCTCCTCAATGAGCG 60.392 55.000 4.4 0.0 0.00 5.03 R
4785 5271 0.033109 GGTTCAAGAATGGGAGGGGG 60.033 60.000 0.0 0.0 0.00 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.438781 TCTCTCTCTCTCTCTCGTTTTGC 59.561 47.826 0.00 0.00 0.00 3.68
43 44 3.438781 TCTCTCTCTCTCTCGTTTTGCTC 59.561 47.826 0.00 0.00 0.00 4.26
52 53 3.262420 TCTCGTTTTGCTCTAGAATGCC 58.738 45.455 1.83 0.00 0.00 4.40
87 88 2.907042 CAAGAACTCTAGGGTTCCTGGT 59.093 50.000 28.21 10.21 44.56 4.00
97 98 2.041755 AGGGTTCCTGGTCCTTCATTTC 59.958 50.000 9.61 0.00 29.57 2.17
141 148 2.289565 GGTAAATCCTTTCTCCTGGCG 58.710 52.381 0.00 0.00 0.00 5.69
155 162 2.835431 GGCGGCTCTAGGCTCTGA 60.835 66.667 0.00 0.00 41.46 3.27
173 180 1.515521 GAGGTTGTTCAGTTGGGGCG 61.516 60.000 0.00 0.00 0.00 6.13
200 225 3.607775 CGAGAAGAATGTGTGGTTGCTTG 60.608 47.826 0.00 0.00 0.00 4.01
218 243 1.459450 TGGTTGCGATTTCTTAGGCC 58.541 50.000 0.00 0.00 0.00 5.19
255 289 3.603158 TTGCTAGAGTATTTCCGTGCA 57.397 42.857 0.00 0.00 0.00 4.57
264 298 4.579869 AGTATTTCCGTGCAGTTGAGAAT 58.420 39.130 0.00 0.00 0.00 2.40
266 300 6.349300 AGTATTTCCGTGCAGTTGAGAATAT 58.651 36.000 0.00 0.00 0.00 1.28
275 318 7.010552 CCGTGCAGTTGAGAATATATTATAGGC 59.989 40.741 0.00 0.00 0.00 3.93
276 319 7.761704 CGTGCAGTTGAGAATATATTATAGGCT 59.238 37.037 0.00 0.00 0.00 4.58
286 329 9.765795 AGAATATATTATAGGCTAATTCGGTGC 57.234 33.333 0.00 0.00 0.00 5.01
287 330 8.589335 AATATATTATAGGCTAATTCGGTGCG 57.411 34.615 0.00 0.00 0.00 5.34
288 331 3.738830 TTATAGGCTAATTCGGTGCGT 57.261 42.857 0.00 0.00 0.00 5.24
289 332 2.614829 ATAGGCTAATTCGGTGCGTT 57.385 45.000 0.00 0.00 0.00 4.84
290 333 2.389962 TAGGCTAATTCGGTGCGTTT 57.610 45.000 0.00 0.00 0.00 3.60
291 334 1.530323 AGGCTAATTCGGTGCGTTTT 58.470 45.000 0.00 0.00 0.00 2.43
292 335 1.199097 AGGCTAATTCGGTGCGTTTTG 59.801 47.619 0.00 0.00 0.00 2.44
293 336 1.613270 GCTAATTCGGTGCGTTTTGG 58.387 50.000 0.00 0.00 0.00 3.28
294 337 1.731098 GCTAATTCGGTGCGTTTTGGG 60.731 52.381 0.00 0.00 0.00 4.12
295 338 0.241481 TAATTCGGTGCGTTTTGGGC 59.759 50.000 0.00 0.00 0.00 5.36
296 339 1.460273 AATTCGGTGCGTTTTGGGCT 61.460 50.000 0.00 0.00 0.00 5.19
297 340 2.141122 ATTCGGTGCGTTTTGGGCTG 62.141 55.000 0.00 0.00 0.00 4.85
298 341 4.341502 CGGTGCGTTTTGGGCTGG 62.342 66.667 0.00 0.00 0.00 4.85
299 342 4.662961 GGTGCGTTTTGGGCTGGC 62.663 66.667 0.00 0.00 0.00 4.85
307 350 2.736192 CGTTTTGGGCTGGCTTATTTTG 59.264 45.455 0.00 0.00 0.00 2.44
309 352 4.578871 GTTTTGGGCTGGCTTATTTTGAT 58.421 39.130 0.00 0.00 0.00 2.57
315 358 5.247110 TGGGCTGGCTTATTTTGATTGTTTA 59.753 36.000 0.00 0.00 0.00 2.01
316 359 6.070309 TGGGCTGGCTTATTTTGATTGTTTAT 60.070 34.615 0.00 0.00 0.00 1.40
317 360 6.823182 GGGCTGGCTTATTTTGATTGTTTATT 59.177 34.615 0.00 0.00 0.00 1.40
318 361 7.336679 GGGCTGGCTTATTTTGATTGTTTATTT 59.663 33.333 0.00 0.00 0.00 1.40
319 362 9.377312 GGCTGGCTTATTTTGATTGTTTATTTA 57.623 29.630 0.00 0.00 0.00 1.40
344 387 4.566987 ACTAGGGTTTTCGATCTGTTCAC 58.433 43.478 0.00 0.00 0.00 3.18
364 407 2.644798 ACTTTGACCTCAGGGCAGTTAT 59.355 45.455 0.00 0.00 35.63 1.89
365 408 3.274288 CTTTGACCTCAGGGCAGTTATC 58.726 50.000 0.00 0.00 35.63 1.75
522 577 2.337879 TTTGAGCACCGGTGAAGGCT 62.338 55.000 38.30 27.14 39.75 4.58
573 632 3.258123 GTGGGCAAAATAGAGAAAAGCCA 59.742 43.478 0.00 0.00 42.26 4.75
653 713 3.619054 GCAGTCGCTATTCCTCGC 58.381 61.111 0.00 0.00 34.30 5.03
678 740 4.363999 AGCGAGAAACTTGGAAGATATCG 58.636 43.478 0.00 8.54 35.20 2.92
683 745 7.637229 CGAGAAACTTGGAAGATATCGTAGTA 58.363 38.462 0.00 0.00 31.14 1.82
785 883 1.698506 ATCCAGGATCTCGAGTCCAC 58.301 55.000 25.85 11.96 38.25 4.02
797 903 1.336332 CGAGTCCACAGTCAAGACAGG 60.336 57.143 2.72 1.99 32.82 4.00
804 910 1.067283 ACAGTCAAGACAGGCATCGAG 60.067 52.381 2.72 0.00 0.00 4.04
807 913 0.532573 TCAAGACAGGCATCGAGTCC 59.467 55.000 0.00 0.00 32.82 3.85
820 928 6.763610 AGGCATCGAGTCCTAAAGAAAATAAG 59.236 38.462 6.47 0.00 0.00 1.73
876 988 7.741554 AGGGAAGAGTCAAGATAATGTAAGT 57.258 36.000 0.00 0.00 0.00 2.24
880 992 8.417884 GGAAGAGTCAAGATAATGTAAGTAGCT 58.582 37.037 0.00 0.00 32.91 3.32
916 1028 4.799564 TGACCAGGAAATTATGTTTGCC 57.200 40.909 0.00 0.00 0.00 4.52
980 1092 3.125316 GTGCTTATTCGTCCCTCTGTTTG 59.875 47.826 0.00 0.00 0.00 2.93
983 1095 4.215613 GCTTATTCGTCCCTCTGTTTGTTT 59.784 41.667 0.00 0.00 0.00 2.83
984 1096 5.617087 GCTTATTCGTCCCTCTGTTTGTTTC 60.617 44.000 0.00 0.00 0.00 2.78
1086 1200 1.020437 GGAGCAAAGATGGCAGCTAC 58.980 55.000 5.34 0.00 37.48 3.58
1088 1202 0.622665 AGCAAAGATGGCAGCTACCT 59.377 50.000 5.34 0.00 35.19 3.08
1095 1209 2.573462 AGATGGCAGCTACCTTGAAAGA 59.427 45.455 1.98 0.00 0.00 2.52
1146 1260 2.669569 CAACCCACAGTCTGCCGG 60.670 66.667 0.00 0.00 0.00 6.13
1206 1320 1.127343 GGGAGGAGAGGTCCATCTTG 58.873 60.000 0.00 0.00 46.80 3.02
1266 1380 4.641939 GCATTTTGCCGAGGACCTCCTA 62.642 54.545 16.13 0.00 41.58 2.94
1368 1482 1.377856 GCAGAGAAGGCCAGGGAAC 60.378 63.158 5.01 0.00 0.00 3.62
1370 1484 1.229209 AGAGAAGGCCAGGGAACGA 60.229 57.895 5.01 0.00 0.00 3.85
1389 1503 2.194271 GACGAGGAATCATTGGACGTC 58.806 52.381 7.13 7.13 40.77 4.34
1392 1506 2.417379 CGAGGAATCATTGGACGTCACT 60.417 50.000 18.91 0.00 0.00 3.41
1464 1578 4.564406 CCTGGAAGTGTCAGCAGTAGATTT 60.564 45.833 0.00 0.00 0.00 2.17
1546 1660 0.868406 GGCGAAACTCTTGTCAGTGG 59.132 55.000 0.00 0.00 0.00 4.00
1718 1832 8.494016 CCAAGTTTGGTACCAACAAATAAAAA 57.506 30.769 27.08 6.30 43.43 1.94
1719 1833 8.608317 CCAAGTTTGGTACCAACAAATAAAAAG 58.392 33.333 27.08 8.50 43.43 2.27
1824 1938 1.493022 ACAGTAAGTTCACCAAGGGCA 59.507 47.619 0.00 0.00 0.00 5.36
1863 1977 1.877443 CCTAAGTCAAAACCACCACCG 59.123 52.381 0.00 0.00 0.00 4.94
1911 2025 3.100671 AGGAAAGGACTCTCAGCGTAAT 58.899 45.455 0.00 0.00 0.00 1.89
1982 2096 9.807649 GCTTTTAAATACCATGAATTCTGATGT 57.192 29.630 7.05 1.86 0.00 3.06
1999 2113 1.526917 GTGCACAAGGTCCAGCAGT 60.527 57.895 13.17 0.00 37.72 4.40
2131 2245 0.686789 GGGCCAAGCTCAAACCAAAT 59.313 50.000 4.39 0.00 0.00 2.32
2177 2291 4.290969 TCTCATATAACTCGAAAGCAGCG 58.709 43.478 0.00 0.00 0.00 5.18
2236 2350 8.060090 GCAGCAATAAACAGAAATATCATTTGC 58.940 33.333 0.00 0.00 0.00 3.68
2276 2390 2.158885 GGAGGAAGGATGTGAAGGCTAC 60.159 54.545 0.00 0.00 0.00 3.58
2373 2493 1.093972 CATGCCGTACAATGAAGCCA 58.906 50.000 0.00 0.00 0.00 4.75
2374 2494 1.472082 CATGCCGTACAATGAAGCCAA 59.528 47.619 0.00 0.00 0.00 4.52
2500 2621 7.886629 AAGCATAGCCTGAAAATCTTTCATA 57.113 32.000 2.48 0.00 0.00 2.15
2514 2635 8.864069 AAATCTTTCATACTATCTGAGACACG 57.136 34.615 0.00 0.00 0.00 4.49
2522 2643 5.564048 ACTATCTGAGACACGAAACTACC 57.436 43.478 0.00 0.00 0.00 3.18
2577 2698 6.738649 CGAGAACCTTTTGAAATCGAAATCTC 59.261 38.462 11.73 11.73 33.59 2.75
2690 2812 5.068591 GGTTGGTTCAAACACTTATGTCCTT 59.931 40.000 0.00 0.00 38.45 3.36
2743 2865 1.354040 GTGCACAGAGAGTTCATCCG 58.646 55.000 13.17 0.00 0.00 4.18
2801 2923 1.350351 AGTGATGAAAGCTGCCAGAGT 59.650 47.619 0.00 0.00 0.00 3.24
2856 2978 7.757526 TGGTAATAATCACCAAACTTTCATCG 58.242 34.615 0.00 0.00 43.08 3.84
2857 2979 7.148154 TGGTAATAATCACCAAACTTTCATCGG 60.148 37.037 0.00 0.00 43.08 4.18
2860 2982 5.529581 AATCACCAAACTTTCATCGGTTT 57.470 34.783 0.00 0.00 36.27 3.27
2904 3047 4.322057 AGGCCAAAAGTAGGAATGACAT 57.678 40.909 5.01 0.00 0.00 3.06
2908 3051 4.462483 GCCAAAAGTAGGAATGACATCCAA 59.538 41.667 6.67 0.00 42.27 3.53
2909 3052 5.047377 GCCAAAAGTAGGAATGACATCCAAA 60.047 40.000 6.67 0.00 42.27 3.28
2910 3053 6.351286 GCCAAAAGTAGGAATGACATCCAAAT 60.351 38.462 6.67 0.00 42.27 2.32
3012 3155 5.452077 CCTTGGTTCGGGTTTACAATGAAAA 60.452 40.000 0.00 0.00 0.00 2.29
3023 3166 6.074569 GGTTTACAATGAAAATGGTTCACACG 60.075 38.462 0.00 0.00 0.00 4.49
3048 3191 5.114780 AGTGCTACATCTACTGCTGATTTG 58.885 41.667 0.00 0.00 0.00 2.32
3056 3199 8.340618 ACATCTACTGCTGATTTGTGTTATTT 57.659 30.769 0.00 0.00 0.00 1.40
3119 3262 6.715344 TTTGGTGATACTGAATTCACGTAC 57.285 37.500 3.38 3.15 42.51 3.67
3139 3282 8.785101 CACGTACACAATCTTACAATTTTATGC 58.215 33.333 0.00 0.00 0.00 3.14
3167 3310 9.438291 CTAATTTAAGAATATTTGACTGCACGG 57.562 33.333 0.00 0.00 0.00 4.94
3192 3335 7.394816 GTTTCTAGGATGGCCTATATTTAGCA 58.605 38.462 3.32 0.00 45.54 3.49
3195 3338 4.923415 AGGATGGCCTATATTTAGCAACC 58.077 43.478 3.32 0.00 44.74 3.77
3204 3347 5.765182 CCTATATTTAGCAACCAAGGGAGTG 59.235 44.000 0.00 0.00 0.00 3.51
3219 3362 2.482864 GGAGTGCCATGGTTTTGTTTG 58.517 47.619 14.67 0.00 0.00 2.93
3220 3363 2.158971 GGAGTGCCATGGTTTTGTTTGT 60.159 45.455 14.67 0.00 0.00 2.83
3295 3440 9.869757 ACACAGCCATTTATTAAAAAGGATTAC 57.130 29.630 12.62 0.00 35.84 1.89
3406 3585 5.750352 AACAATTCCTTTTCATGGCAGAT 57.250 34.783 0.00 0.00 0.00 2.90
3477 3656 2.236489 AGCAGCCCACCAATAAACAT 57.764 45.000 0.00 0.00 0.00 2.71
3562 3741 1.225855 TCGTTAACCAAGCAGCACAG 58.774 50.000 0.00 0.00 0.00 3.66
3573 3752 1.712977 GCAGCACAGCTCATAGGCAC 61.713 60.000 0.00 0.00 36.40 5.01
3583 3762 2.398498 CTCATAGGCACTGACGCATAC 58.602 52.381 0.00 0.00 41.52 2.39
3673 3852 1.945394 GTGGACATAGCAATGGAGCAG 59.055 52.381 0.00 0.00 37.43 4.24
3700 3879 2.827555 CGAAAACATCGTCAGCAGAAC 58.172 47.619 0.00 0.00 46.52 3.01
3706 3885 1.134995 CATCGTCAGCAGAACAGCCTA 60.135 52.381 0.00 0.00 34.23 3.93
3720 3899 7.525526 GCAGAACAGCCTATATTACACTGGATA 60.526 40.741 0.00 0.00 32.60 2.59
3782 3961 3.257393 GAGGCATTGCTAGGTGATATCG 58.743 50.000 8.82 0.00 0.00 2.92
3793 3972 0.603569 GTGATATCGGCGATGGGACT 59.396 55.000 31.08 8.24 0.00 3.85
3880 4059 1.786937 TGAAGCTGGAGAGGGATCTC 58.213 55.000 0.00 0.00 40.25 2.75
3889 4068 2.839632 AGGGATCTCGGATGCGCA 60.840 61.111 14.96 14.96 0.00 6.09
3910 4089 2.809174 CCGTCGATCAACAGCGCA 60.809 61.111 11.47 0.00 0.00 6.09
3970 4149 1.338136 CGGAGTGCTGGGTAAGGGAT 61.338 60.000 0.00 0.00 0.00 3.85
4008 4187 4.434685 CTCGCTCATTGAGGAGGC 57.565 61.111 15.28 0.88 35.41 4.70
4011 4190 1.220206 CGCTCATTGAGGAGGCTGT 59.780 57.895 15.28 0.00 35.41 4.40
4015 4194 2.163211 GCTCATTGAGGAGGCTGTTTTC 59.837 50.000 15.28 0.00 35.41 2.29
4139 4318 5.456822 GTGCTTTCAGTTGCTTTTTCTGTAG 59.543 40.000 0.00 0.00 0.00 2.74
4146 4325 4.036852 AGTTGCTTTTTCTGTAGGAGTTGC 59.963 41.667 0.00 0.00 0.00 4.17
4151 4330 4.415881 TTTTCTGTAGGAGTTGCTCACA 57.584 40.909 0.00 0.00 31.08 3.58
4153 4332 3.599730 TCTGTAGGAGTTGCTCACATG 57.400 47.619 0.00 0.00 31.08 3.21
4192 4375 4.021981 GCTTTGCCTTGGTTCAGAAACTAT 60.022 41.667 0.00 0.00 35.61 2.12
4264 4447 4.152223 TGCAATACTTGTGACAGACGATTG 59.848 41.667 0.00 7.01 0.00 2.67
4267 4450 2.838736 ACTTGTGACAGACGATTGCTT 58.161 42.857 0.00 0.00 0.00 3.91
4268 4451 2.802816 ACTTGTGACAGACGATTGCTTC 59.197 45.455 0.00 0.00 0.00 3.86
4269 4452 1.795768 TGTGACAGACGATTGCTTCC 58.204 50.000 0.00 0.00 0.00 3.46
4270 4453 0.716108 GTGACAGACGATTGCTTCCG 59.284 55.000 0.00 0.00 0.00 4.30
4287 4474 4.331168 GCTTCCGCTAATTATCTGCCATAG 59.669 45.833 0.00 0.00 0.00 2.23
4294 4481 8.093307 CCGCTAATTATCTGCCATAGATATCAT 58.907 37.037 5.32 0.00 45.40 2.45
4304 4491 5.307716 TGCCATAGATATCATGACAACAGGA 59.692 40.000 5.32 0.00 40.99 3.86
4362 4552 8.588472 TGAGATGAGTGTTTATCTTCTTCTTGA 58.412 33.333 0.00 0.00 33.97 3.02
4368 4558 7.588512 AGTGTTTATCTTCTTCTTGACAATGC 58.411 34.615 0.00 0.00 0.00 3.56
4379 4569 4.654915 TCTTGACAATGCCAAAGAGATGA 58.345 39.130 0.00 0.00 0.00 2.92
4380 4570 5.072055 TCTTGACAATGCCAAAGAGATGAA 58.928 37.500 0.00 0.00 0.00 2.57
4381 4571 5.713389 TCTTGACAATGCCAAAGAGATGAAT 59.287 36.000 0.00 0.00 0.00 2.57
4444 4644 9.712305 ATGCTACATATCATCCTTTAGTTACAC 57.288 33.333 0.00 0.00 0.00 2.90
4483 4683 9.226345 GCTGTCAAATGCTATGTCTTTTTATAC 57.774 33.333 0.00 0.00 0.00 1.47
4491 4691 8.370493 TGCTATGTCTTTTTATACTCATGAGC 57.630 34.615 22.83 3.74 0.00 4.26
4507 4707 6.183361 ACTCATGAGCATTAATCCCTTGAGAT 60.183 38.462 22.83 0.00 0.00 2.75
4508 4708 6.002082 TCATGAGCATTAATCCCTTGAGATG 58.998 40.000 0.00 0.00 0.00 2.90
4510 4710 4.166725 TGAGCATTAATCCCTTGAGATGGT 59.833 41.667 0.00 0.00 0.00 3.55
4511 4711 5.369404 TGAGCATTAATCCCTTGAGATGGTA 59.631 40.000 0.00 0.00 0.00 3.25
4512 4712 6.126507 TGAGCATTAATCCCTTGAGATGGTAA 60.127 38.462 0.00 0.00 0.00 2.85
4516 4718 8.515414 GCATTAATCCCTTGAGATGGTAATTAC 58.485 37.037 7.09 7.09 0.00 1.89
4552 4754 0.950555 TCATCTCCGCGGCATATTGC 60.951 55.000 23.51 0.00 44.08 3.56
4563 5037 2.805295 CGGCATATTGCTACTTTCGGGA 60.805 50.000 0.00 0.00 44.28 5.14
4596 5070 5.312895 TCCTTTCTGAATTTCGACCATTCA 58.687 37.500 15.30 15.30 38.14 2.57
4607 5081 4.513198 TCGACCATTCAAATTTTGGACC 57.487 40.909 13.22 4.99 34.52 4.46
4608 5082 3.257127 TCGACCATTCAAATTTTGGACCC 59.743 43.478 13.22 3.02 34.52 4.46
4611 5085 5.127031 CGACCATTCAAATTTTGGACCCTAT 59.873 40.000 13.22 0.00 34.52 2.57
4651 5125 1.738099 CTCTGTCACTTTCGGGCCG 60.738 63.158 22.51 22.51 0.00 6.13
4655 5129 2.281208 TCACTTTCGGGCCGGTTG 60.281 61.111 27.98 17.73 0.00 3.77
4672 5146 2.473816 GTTGCCTTTTCCAGAGCAAAC 58.526 47.619 0.00 0.00 45.95 2.93
4702 5179 3.752222 TGTCTCTGTAAACGGACTCTCTC 59.248 47.826 0.00 0.00 0.00 3.20
4704 5181 3.752222 TCTCTGTAAACGGACTCTCTCAC 59.248 47.826 0.00 0.00 0.00 3.51
4706 5183 2.557056 CTGTAAACGGACTCTCTCACCA 59.443 50.000 0.00 0.00 0.00 4.17
4707 5184 2.295349 TGTAAACGGACTCTCTCACCAC 59.705 50.000 0.00 0.00 0.00 4.16
4709 5186 0.822532 AACGGACTCTCTCACCACGT 60.823 55.000 0.00 0.00 34.25 4.49
4724 5201 2.806244 ACCACGTAGAATTGTTGTGAGC 59.194 45.455 8.62 0.00 32.39 4.26
4726 5203 4.242475 CCACGTAGAATTGTTGTGAGCTA 58.758 43.478 8.62 0.00 32.39 3.32
4731 5208 7.803189 CACGTAGAATTGTTGTGAGCTAATTTT 59.197 33.333 0.00 0.00 32.39 1.82
4732 5209 8.349983 ACGTAGAATTGTTGTGAGCTAATTTTT 58.650 29.630 0.00 0.00 0.00 1.94
4735 5212 8.807667 AGAATTGTTGTGAGCTAATTTTTGAG 57.192 30.769 0.00 0.00 0.00 3.02
4737 5214 7.935338 ATTGTTGTGAGCTAATTTTTGAGTG 57.065 32.000 0.00 0.00 0.00 3.51
4738 5215 6.691754 TGTTGTGAGCTAATTTTTGAGTGA 57.308 33.333 0.00 0.00 0.00 3.41
4739 5216 7.094508 TGTTGTGAGCTAATTTTTGAGTGAA 57.905 32.000 0.00 0.00 0.00 3.18
4740 5217 7.542890 TGTTGTGAGCTAATTTTTGAGTGAAA 58.457 30.769 0.00 0.00 0.00 2.69
4741 5218 8.196771 TGTTGTGAGCTAATTTTTGAGTGAAAT 58.803 29.630 0.00 0.00 0.00 2.17
4742 5219 9.034544 GTTGTGAGCTAATTTTTGAGTGAAATT 57.965 29.630 0.00 0.00 39.36 1.82
4743 5220 9.598517 TTGTGAGCTAATTTTTGAGTGAAATTT 57.401 25.926 0.00 0.00 37.71 1.82
4784 5270 5.914898 ACCTTGTATATTTTGAAGGCCAC 57.085 39.130 5.01 0.00 38.91 5.01
4785 5271 4.709886 ACCTTGTATATTTTGAAGGCCACC 59.290 41.667 5.01 0.00 38.91 4.61
4803 5289 3.596362 CCCCCTCCCATTCTTGAAC 57.404 57.895 0.00 0.00 0.00 3.18
4804 5290 0.033109 CCCCCTCCCATTCTTGAACC 60.033 60.000 0.00 0.00 0.00 3.62
4805 5291 1.002857 CCCCTCCCATTCTTGAACCT 58.997 55.000 0.00 0.00 0.00 3.50
4806 5292 2.205342 CCCCTCCCATTCTTGAACCTA 58.795 52.381 0.00 0.00 0.00 3.08
4807 5293 2.785857 CCCCTCCCATTCTTGAACCTAT 59.214 50.000 0.00 0.00 0.00 2.57
4808 5294 3.181439 CCCCTCCCATTCTTGAACCTATC 60.181 52.174 0.00 0.00 0.00 2.08
4809 5295 3.718956 CCCTCCCATTCTTGAACCTATCT 59.281 47.826 0.00 0.00 0.00 1.98
4810 5296 4.166919 CCCTCCCATTCTTGAACCTATCTT 59.833 45.833 0.00 0.00 0.00 2.40
4811 5297 5.340360 CCCTCCCATTCTTGAACCTATCTTT 60.340 44.000 0.00 0.00 0.00 2.52
4812 5298 5.591877 CCTCCCATTCTTGAACCTATCTTTG 59.408 44.000 0.00 0.00 0.00 2.77
4813 5299 6.139679 TCCCATTCTTGAACCTATCTTTGT 57.860 37.500 0.00 0.00 0.00 2.83
4814 5300 5.945784 TCCCATTCTTGAACCTATCTTTGTG 59.054 40.000 0.00 0.00 0.00 3.33
4815 5301 5.393461 CCCATTCTTGAACCTATCTTTGTGC 60.393 44.000 0.00 0.00 0.00 4.57
4816 5302 5.416952 CCATTCTTGAACCTATCTTTGTGCT 59.583 40.000 0.00 0.00 0.00 4.40
4817 5303 6.404074 CCATTCTTGAACCTATCTTTGTGCTC 60.404 42.308 0.00 0.00 0.00 4.26
4818 5304 5.227569 TCTTGAACCTATCTTTGTGCTCA 57.772 39.130 0.00 0.00 0.00 4.26
4819 5305 5.240891 TCTTGAACCTATCTTTGTGCTCAG 58.759 41.667 0.00 0.00 0.00 3.35
4820 5306 4.623932 TGAACCTATCTTTGTGCTCAGT 57.376 40.909 0.00 0.00 0.00 3.41
4821 5307 4.569943 TGAACCTATCTTTGTGCTCAGTC 58.430 43.478 0.00 0.00 0.00 3.51
4822 5308 4.284490 TGAACCTATCTTTGTGCTCAGTCT 59.716 41.667 0.00 0.00 0.00 3.24
4823 5309 4.464069 ACCTATCTTTGTGCTCAGTCTC 57.536 45.455 0.00 0.00 0.00 3.36
4824 5310 3.119316 ACCTATCTTTGTGCTCAGTCTCG 60.119 47.826 0.00 0.00 0.00 4.04
4825 5311 1.719600 ATCTTTGTGCTCAGTCTCGC 58.280 50.000 0.00 0.00 0.00 5.03
4826 5312 0.676184 TCTTTGTGCTCAGTCTCGCT 59.324 50.000 0.00 0.00 0.00 4.93
4827 5313 1.066914 CTTTGTGCTCAGTCTCGCTC 58.933 55.000 0.00 0.00 0.00 5.03
4828 5314 0.676184 TTTGTGCTCAGTCTCGCTCT 59.324 50.000 0.00 0.00 0.00 4.09
4829 5315 0.038801 TTGTGCTCAGTCTCGCTCTG 60.039 55.000 0.00 0.00 0.00 3.35
4830 5316 1.805134 GTGCTCAGTCTCGCTCTGC 60.805 63.158 0.00 0.00 33.48 4.26
4831 5317 1.975940 TGCTCAGTCTCGCTCTGCT 60.976 57.895 0.00 0.00 33.48 4.24
4832 5318 1.215117 GCTCAGTCTCGCTCTGCTT 59.785 57.895 0.00 0.00 33.48 3.91
4833 5319 0.801836 GCTCAGTCTCGCTCTGCTTC 60.802 60.000 0.00 0.00 33.48 3.86
4834 5320 0.525311 CTCAGTCTCGCTCTGCTTCA 59.475 55.000 0.00 0.00 33.48 3.02
4835 5321 0.961753 TCAGTCTCGCTCTGCTTCAA 59.038 50.000 0.00 0.00 33.48 2.69
4836 5322 1.067985 TCAGTCTCGCTCTGCTTCAAG 60.068 52.381 0.00 0.00 33.48 3.02
4837 5323 0.389687 AGTCTCGCTCTGCTTCAAGC 60.390 55.000 1.04 1.04 42.82 4.01
4838 5324 0.389687 GTCTCGCTCTGCTTCAAGCT 60.390 55.000 11.57 0.00 42.97 3.74
4839 5325 0.319728 TCTCGCTCTGCTTCAAGCTT 59.680 50.000 11.57 0.00 42.97 3.74
4840 5326 1.546029 TCTCGCTCTGCTTCAAGCTTA 59.454 47.619 11.57 0.00 42.97 3.09
4841 5327 2.167281 TCTCGCTCTGCTTCAAGCTTAT 59.833 45.455 11.57 0.00 42.97 1.73
4842 5328 2.539274 CTCGCTCTGCTTCAAGCTTATC 59.461 50.000 11.57 0.00 42.97 1.75
4843 5329 2.167281 TCGCTCTGCTTCAAGCTTATCT 59.833 45.455 11.57 0.00 42.97 1.98
4844 5330 2.935201 CGCTCTGCTTCAAGCTTATCTT 59.065 45.455 11.57 0.00 42.97 2.40
4854 5340 4.478206 CAAGCTTATCTTGTGAGGGAGA 57.522 45.455 0.00 0.00 45.48 3.71
4855 5341 4.440880 CAAGCTTATCTTGTGAGGGAGAG 58.559 47.826 0.00 0.00 45.48 3.20
4856 5342 3.987745 AGCTTATCTTGTGAGGGAGAGA 58.012 45.455 0.00 0.00 0.00 3.10
4857 5343 4.555689 AGCTTATCTTGTGAGGGAGAGAT 58.444 43.478 0.00 0.00 33.68 2.75
4858 5344 4.968080 AGCTTATCTTGTGAGGGAGAGATT 59.032 41.667 0.00 0.00 31.71 2.40
4859 5345 5.070313 AGCTTATCTTGTGAGGGAGAGATTC 59.930 44.000 0.00 0.00 31.71 2.52
4860 5346 5.070313 GCTTATCTTGTGAGGGAGAGATTCT 59.930 44.000 0.00 0.00 31.71 2.40
4861 5347 6.266558 GCTTATCTTGTGAGGGAGAGATTCTA 59.733 42.308 0.00 0.00 31.71 2.10
4862 5348 7.039082 GCTTATCTTGTGAGGGAGAGATTCTAT 60.039 40.741 0.00 0.00 31.71 1.98
4863 5349 6.669125 ATCTTGTGAGGGAGAGATTCTATG 57.331 41.667 0.00 0.00 0.00 2.23
4864 5350 5.770919 TCTTGTGAGGGAGAGATTCTATGA 58.229 41.667 0.00 0.00 0.00 2.15
4865 5351 5.832595 TCTTGTGAGGGAGAGATTCTATGAG 59.167 44.000 0.00 0.00 0.00 2.90
4866 5352 5.136068 TGTGAGGGAGAGATTCTATGAGT 57.864 43.478 0.00 0.00 0.00 3.41
4867 5353 5.523588 TGTGAGGGAGAGATTCTATGAGTT 58.476 41.667 0.00 0.00 0.00 3.01
4868 5354 5.596361 TGTGAGGGAGAGATTCTATGAGTTC 59.404 44.000 0.00 0.00 0.00 3.01
4869 5355 5.596361 GTGAGGGAGAGATTCTATGAGTTCA 59.404 44.000 0.00 0.00 0.00 3.18
4870 5356 6.267471 GTGAGGGAGAGATTCTATGAGTTCAT 59.733 42.308 0.00 0.00 40.22 2.57
4871 5357 6.267242 TGAGGGAGAGATTCTATGAGTTCATG 59.733 42.308 4.90 0.00 37.15 3.07
4872 5358 5.543405 AGGGAGAGATTCTATGAGTTCATGG 59.457 44.000 4.90 2.16 37.15 3.66
4873 5359 5.279910 GGGAGAGATTCTATGAGTTCATGGG 60.280 48.000 4.90 0.00 37.15 4.00
4874 5360 5.541868 GGAGAGATTCTATGAGTTCATGGGA 59.458 44.000 4.90 0.00 37.15 4.37
4875 5361 6.295236 GGAGAGATTCTATGAGTTCATGGGAG 60.295 46.154 4.90 0.00 37.15 4.30
4876 5362 6.380414 AGAGATTCTATGAGTTCATGGGAGA 58.620 40.000 4.90 0.00 37.15 3.71
4877 5363 6.494491 AGAGATTCTATGAGTTCATGGGAGAG 59.506 42.308 4.90 0.00 37.15 3.20
4878 5364 6.142498 AGATTCTATGAGTTCATGGGAGAGT 58.858 40.000 4.90 0.00 37.15 3.24
4879 5365 6.614906 AGATTCTATGAGTTCATGGGAGAGTT 59.385 38.462 4.90 0.00 37.15 3.01
4880 5366 6.627087 TTCTATGAGTTCATGGGAGAGTTT 57.373 37.500 4.90 0.00 37.15 2.66
4881 5367 5.982356 TCTATGAGTTCATGGGAGAGTTTG 58.018 41.667 4.90 0.00 37.15 2.93
4882 5368 4.916041 ATGAGTTCATGGGAGAGTTTGA 57.084 40.909 0.00 0.00 34.83 2.69
4883 5369 4.916041 TGAGTTCATGGGAGAGTTTGAT 57.084 40.909 0.00 0.00 0.00 2.57
4884 5370 5.246981 TGAGTTCATGGGAGAGTTTGATT 57.753 39.130 0.00 0.00 0.00 2.57
4885 5371 5.005740 TGAGTTCATGGGAGAGTTTGATTG 58.994 41.667 0.00 0.00 0.00 2.67
4886 5372 5.221904 TGAGTTCATGGGAGAGTTTGATTGA 60.222 40.000 0.00 0.00 0.00 2.57
4887 5373 5.634118 AGTTCATGGGAGAGTTTGATTGAA 58.366 37.500 0.00 0.00 0.00 2.69
4888 5374 6.070656 AGTTCATGGGAGAGTTTGATTGAAA 58.929 36.000 0.00 0.00 0.00 2.69
4889 5375 6.550854 AGTTCATGGGAGAGTTTGATTGAAAA 59.449 34.615 0.00 0.00 0.00 2.29
4890 5376 7.234166 AGTTCATGGGAGAGTTTGATTGAAAAT 59.766 33.333 0.00 0.00 0.00 1.82
4891 5377 7.161773 TCATGGGAGAGTTTGATTGAAAATC 57.838 36.000 0.00 0.00 38.65 2.17
4893 5379 7.452501 TCATGGGAGAGTTTGATTGAAAATCTT 59.547 33.333 0.33 0.00 46.45 2.40
4894 5380 7.601705 TGGGAGAGTTTGATTGAAAATCTTT 57.398 32.000 0.33 0.00 46.45 2.52
4895 5381 8.021898 TGGGAGAGTTTGATTGAAAATCTTTT 57.978 30.769 0.33 0.00 46.45 2.27
4896 5382 9.142014 TGGGAGAGTTTGATTGAAAATCTTTTA 57.858 29.630 0.33 0.00 46.45 1.52
4897 5383 9.981114 GGGAGAGTTTGATTGAAAATCTTTTAA 57.019 29.630 0.33 0.00 46.45 1.52
4913 5399 9.971922 AAATCTTTTAAGAAGTTCATCCTTGTG 57.028 29.630 5.50 0.00 38.77 3.33
4914 5400 8.924511 ATCTTTTAAGAAGTTCATCCTTGTGA 57.075 30.769 5.50 0.00 38.77 3.58
4915 5401 8.154649 TCTTTTAAGAAGTTCATCCTTGTGAC 57.845 34.615 5.50 0.00 30.73 3.67
4916 5402 7.993183 TCTTTTAAGAAGTTCATCCTTGTGACT 59.007 33.333 5.50 0.00 30.73 3.41
4917 5403 8.519799 TTTTAAGAAGTTCATCCTTGTGACTT 57.480 30.769 5.50 0.00 34.98 3.01
4918 5404 8.519799 TTTAAGAAGTTCATCCTTGTGACTTT 57.480 30.769 5.50 0.00 33.57 2.66
4919 5405 6.382869 AAGAAGTTCATCCTTGTGACTTTG 57.617 37.500 5.50 0.00 33.57 2.77
4920 5406 4.276926 AGAAGTTCATCCTTGTGACTTTGC 59.723 41.667 5.50 0.00 33.57 3.68
4921 5407 3.825328 AGTTCATCCTTGTGACTTTGCT 58.175 40.909 0.00 0.00 0.00 3.91
4922 5408 4.210331 AGTTCATCCTTGTGACTTTGCTT 58.790 39.130 0.00 0.00 0.00 3.91
4923 5409 4.646492 AGTTCATCCTTGTGACTTTGCTTT 59.354 37.500 0.00 0.00 0.00 3.51
4924 5410 4.572985 TCATCCTTGTGACTTTGCTTTG 57.427 40.909 0.00 0.00 0.00 2.77
4925 5411 2.869233 TCCTTGTGACTTTGCTTTGC 57.131 45.000 0.00 0.00 0.00 3.68
4926 5412 2.378038 TCCTTGTGACTTTGCTTTGCT 58.622 42.857 0.00 0.00 0.00 3.91
4927 5413 2.760092 TCCTTGTGACTTTGCTTTGCTT 59.240 40.909 0.00 0.00 0.00 3.91
4928 5414 3.118542 CCTTGTGACTTTGCTTTGCTTC 58.881 45.455 0.00 0.00 0.00 3.86
4929 5415 3.181483 CCTTGTGACTTTGCTTTGCTTCT 60.181 43.478 0.00 0.00 0.00 2.85
4930 5416 3.698029 TGTGACTTTGCTTTGCTTCTC 57.302 42.857 0.00 0.00 0.00 2.87
4931 5417 3.016031 TGTGACTTTGCTTTGCTTCTCA 58.984 40.909 0.00 0.00 0.00 3.27
4932 5418 3.181497 TGTGACTTTGCTTTGCTTCTCAC 60.181 43.478 0.00 0.00 0.00 3.51
4933 5419 3.065925 GTGACTTTGCTTTGCTTCTCACT 59.934 43.478 0.00 0.00 0.00 3.41
4934 5420 3.313526 TGACTTTGCTTTGCTTCTCACTC 59.686 43.478 0.00 0.00 0.00 3.51
4935 5421 3.549794 ACTTTGCTTTGCTTCTCACTCT 58.450 40.909 0.00 0.00 0.00 3.24
4936 5422 3.950395 ACTTTGCTTTGCTTCTCACTCTT 59.050 39.130 0.00 0.00 0.00 2.85
4937 5423 3.976793 TTGCTTTGCTTCTCACTCTTG 57.023 42.857 0.00 0.00 0.00 3.02
4938 5424 1.605710 TGCTTTGCTTCTCACTCTTGC 59.394 47.619 0.00 0.00 0.00 4.01
4939 5425 1.605710 GCTTTGCTTCTCACTCTTGCA 59.394 47.619 0.00 0.00 0.00 4.08
4940 5426 2.350580 GCTTTGCTTCTCACTCTTGCAG 60.351 50.000 0.00 0.00 35.02 4.41
4941 5427 1.888215 TTGCTTCTCACTCTTGCAGG 58.112 50.000 0.00 0.00 35.02 4.85
4942 5428 0.035881 TGCTTCTCACTCTTGCAGGG 59.964 55.000 0.00 0.00 0.00 4.45
4943 5429 0.036022 GCTTCTCACTCTTGCAGGGT 59.964 55.000 0.00 0.00 0.00 4.34
4944 5430 1.805869 CTTCTCACTCTTGCAGGGTG 58.194 55.000 9.20 9.20 0.00 4.61
4945 5431 1.071385 CTTCTCACTCTTGCAGGGTGT 59.929 52.381 13.58 3.47 33.30 4.16
4946 5432 0.394192 TCTCACTCTTGCAGGGTGTG 59.606 55.000 13.58 13.61 33.30 3.82
4954 5440 4.082523 GCAGGGTGTGCGCCTCTA 62.083 66.667 4.18 0.00 43.99 2.43
4955 5441 2.662596 CAGGGTGTGCGCCTCTAA 59.337 61.111 4.18 0.00 0.00 2.10
4956 5442 1.448540 CAGGGTGTGCGCCTCTAAG 60.449 63.158 4.18 0.00 0.00 2.18
4957 5443 2.820037 GGGTGTGCGCCTCTAAGC 60.820 66.667 4.18 0.00 0.00 3.09
4967 5453 2.317530 GCCTCTAAGCGATGAACCTT 57.682 50.000 0.00 0.00 0.00 3.50
4968 5454 2.205911 GCCTCTAAGCGATGAACCTTC 58.794 52.381 0.00 0.00 0.00 3.46
4969 5455 2.418746 GCCTCTAAGCGATGAACCTTCA 60.419 50.000 0.00 0.00 42.14 3.02
4970 5456 3.861840 CCTCTAAGCGATGAACCTTCAA 58.138 45.455 0.00 0.00 41.13 2.69
4971 5457 3.868077 CCTCTAAGCGATGAACCTTCAAG 59.132 47.826 0.00 0.00 41.13 3.02
4972 5458 4.499183 CTCTAAGCGATGAACCTTCAAGT 58.501 43.478 0.00 0.00 41.13 3.16
4973 5459 4.245660 TCTAAGCGATGAACCTTCAAGTG 58.754 43.478 0.00 0.00 41.13 3.16
4974 5460 2.550830 AGCGATGAACCTTCAAGTGT 57.449 45.000 0.00 0.00 41.13 3.55
4975 5461 2.417719 AGCGATGAACCTTCAAGTGTC 58.582 47.619 0.00 0.00 41.13 3.67
4976 5462 1.126846 GCGATGAACCTTCAAGTGTCG 59.873 52.381 4.96 4.96 41.13 4.35
4977 5463 2.404215 CGATGAACCTTCAAGTGTCGT 58.596 47.619 0.00 0.00 41.13 4.34
4978 5464 2.155732 CGATGAACCTTCAAGTGTCGTG 59.844 50.000 0.00 0.00 41.13 4.35
4979 5465 1.948104 TGAACCTTCAAGTGTCGTGG 58.052 50.000 0.00 0.00 33.55 4.94
4980 5466 1.483004 TGAACCTTCAAGTGTCGTGGA 59.517 47.619 0.00 0.00 33.55 4.02
4981 5467 2.093394 TGAACCTTCAAGTGTCGTGGAA 60.093 45.455 0.00 0.00 33.55 3.53
4982 5468 2.240493 ACCTTCAAGTGTCGTGGAAG 57.760 50.000 0.00 0.00 37.18 3.46
4983 5469 1.760613 ACCTTCAAGTGTCGTGGAAGA 59.239 47.619 0.00 0.00 39.20 2.87
4984 5470 2.169769 ACCTTCAAGTGTCGTGGAAGAA 59.830 45.455 0.00 0.00 39.20 2.52
4985 5471 3.181454 ACCTTCAAGTGTCGTGGAAGAAT 60.181 43.478 0.00 0.00 39.20 2.40
4986 5472 3.815401 CCTTCAAGTGTCGTGGAAGAATT 59.185 43.478 0.00 0.00 39.20 2.17
4987 5473 4.994852 CCTTCAAGTGTCGTGGAAGAATTA 59.005 41.667 0.00 0.00 39.20 1.40
4988 5474 5.468746 CCTTCAAGTGTCGTGGAAGAATTAA 59.531 40.000 0.00 0.00 39.20 1.40
4989 5475 6.347725 CCTTCAAGTGTCGTGGAAGAATTAAG 60.348 42.308 0.00 0.00 39.20 1.85
4990 5476 5.849510 TCAAGTGTCGTGGAAGAATTAAGA 58.150 37.500 0.00 0.00 0.00 2.10
4991 5477 5.926542 TCAAGTGTCGTGGAAGAATTAAGAG 59.073 40.000 0.00 0.00 0.00 2.85
4992 5478 5.470047 AGTGTCGTGGAAGAATTAAGAGT 57.530 39.130 0.00 0.00 0.00 3.24
4993 5479 5.855045 AGTGTCGTGGAAGAATTAAGAGTT 58.145 37.500 0.00 0.00 0.00 3.01
4994 5480 6.289064 AGTGTCGTGGAAGAATTAAGAGTTT 58.711 36.000 0.00 0.00 0.00 2.66
4995 5481 6.202954 AGTGTCGTGGAAGAATTAAGAGTTTG 59.797 38.462 0.00 0.00 0.00 2.93
4996 5482 6.018180 GTGTCGTGGAAGAATTAAGAGTTTGT 60.018 38.462 0.00 0.00 0.00 2.83
4997 5483 7.170320 GTGTCGTGGAAGAATTAAGAGTTTGTA 59.830 37.037 0.00 0.00 0.00 2.41
4998 5484 7.170320 TGTCGTGGAAGAATTAAGAGTTTGTAC 59.830 37.037 0.00 0.00 0.00 2.90
4999 5485 7.170320 GTCGTGGAAGAATTAAGAGTTTGTACA 59.830 37.037 0.00 0.00 0.00 2.90
5000 5486 7.711772 TCGTGGAAGAATTAAGAGTTTGTACAA 59.288 33.333 3.59 3.59 0.00 2.41
5001 5487 8.009974 CGTGGAAGAATTAAGAGTTTGTACAAG 58.990 37.037 8.56 0.00 0.00 3.16
5002 5488 8.290325 GTGGAAGAATTAAGAGTTTGTACAAGG 58.710 37.037 8.56 0.00 0.00 3.61
5003 5489 7.040686 TGGAAGAATTAAGAGTTTGTACAAGGC 60.041 37.037 8.56 6.29 0.00 4.35
5004 5490 7.040686 GGAAGAATTAAGAGTTTGTACAAGGCA 60.041 37.037 8.56 0.00 0.00 4.75
5005 5491 7.203255 AGAATTAAGAGTTTGTACAAGGCAC 57.797 36.000 8.56 4.62 0.00 5.01
5006 5492 5.607119 ATTAAGAGTTTGTACAAGGCACG 57.393 39.130 8.56 0.00 0.00 5.34
5007 5493 1.878953 AGAGTTTGTACAAGGCACGG 58.121 50.000 8.56 0.00 0.00 4.94
5008 5494 1.414919 AGAGTTTGTACAAGGCACGGA 59.585 47.619 8.56 0.00 0.00 4.69
5009 5495 1.798813 GAGTTTGTACAAGGCACGGAG 59.201 52.381 8.56 0.00 0.00 4.63
5010 5496 1.414919 AGTTTGTACAAGGCACGGAGA 59.585 47.619 8.56 0.00 0.00 3.71
5011 5497 2.038557 AGTTTGTACAAGGCACGGAGAT 59.961 45.455 8.56 0.00 0.00 2.75
5012 5498 2.380084 TTGTACAAGGCACGGAGATC 57.620 50.000 3.59 0.00 0.00 2.75
5013 5499 0.172578 TGTACAAGGCACGGAGATCG 59.827 55.000 0.00 0.00 45.88 3.69
5025 5511 2.325761 CGGAGATCGTCTTTTTCGTGT 58.674 47.619 0.00 0.00 0.00 4.49
5026 5512 2.090658 CGGAGATCGTCTTTTTCGTGTG 59.909 50.000 0.00 0.00 0.00 3.82
5027 5513 3.314553 GGAGATCGTCTTTTTCGTGTGA 58.685 45.455 0.00 0.00 0.00 3.58
5028 5514 3.365220 GGAGATCGTCTTTTTCGTGTGAG 59.635 47.826 0.00 0.00 0.00 3.51
5029 5515 4.227538 GAGATCGTCTTTTTCGTGTGAGA 58.772 43.478 0.00 0.00 0.00 3.27
5030 5516 3.982058 AGATCGTCTTTTTCGTGTGAGAC 59.018 43.478 0.00 0.00 36.14 3.36
5031 5517 2.466846 TCGTCTTTTTCGTGTGAGACC 58.533 47.619 0.00 0.00 36.12 3.85
5032 5518 2.159212 TCGTCTTTTTCGTGTGAGACCA 60.159 45.455 0.00 0.00 36.12 4.02
5033 5519 2.605818 CGTCTTTTTCGTGTGAGACCAA 59.394 45.455 0.00 0.00 36.12 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.153340 AGAGAGAGAGAGAGAGGAAACAAATG 59.847 42.308 0.00 0.00 0.00 2.32
2 3 5.640147 AGAGAGAGAGAGAGAGGAAACAAA 58.360 41.667 0.00 0.00 0.00 2.83
3 4 5.014123 AGAGAGAGAGAGAGAGAGGAAACAA 59.986 44.000 0.00 0.00 0.00 2.83
5 6 5.104259 AGAGAGAGAGAGAGAGAGGAAAC 57.896 47.826 0.00 0.00 0.00 2.78
6 7 5.032846 AGAGAGAGAGAGAGAGAGAGGAAA 58.967 45.833 0.00 0.00 0.00 3.13
9 10 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
10 11 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
11 12 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
41 42 2.739885 CCATCCTCGGCATTCTAGAG 57.260 55.000 0.00 0.00 0.00 2.43
87 88 0.330267 GGGGGAACGGAAATGAAGGA 59.670 55.000 0.00 0.00 0.00 3.36
109 115 7.060421 AGAAAGGATTTACCAGAACACTTTGA 58.940 34.615 0.00 0.00 39.27 2.69
111 117 6.490381 GGAGAAAGGATTTACCAGAACACTTT 59.510 38.462 0.00 0.00 39.27 2.66
141 148 0.463620 CAACCTCAGAGCCTAGAGCC 59.536 60.000 0.00 0.00 45.47 4.70
155 162 1.528309 CGCCCCAACTGAACAACCT 60.528 57.895 0.00 0.00 0.00 3.50
173 180 1.363744 CACACATTCTTCTCGGCCTC 58.636 55.000 0.00 0.00 0.00 4.70
200 225 0.377203 CGGCCTAAGAAATCGCAACC 59.623 55.000 0.00 0.00 0.00 3.77
226 251 8.136165 ACGGAAATACTCTAGCAAACTATACAG 58.864 37.037 0.00 0.00 0.00 2.74
227 252 7.919091 CACGGAAATACTCTAGCAAACTATACA 59.081 37.037 0.00 0.00 0.00 2.29
230 255 5.753921 GCACGGAAATACTCTAGCAAACTAT 59.246 40.000 0.00 0.00 0.00 2.12
231 256 5.107133 GCACGGAAATACTCTAGCAAACTA 58.893 41.667 0.00 0.00 0.00 2.24
232 257 3.933332 GCACGGAAATACTCTAGCAAACT 59.067 43.478 0.00 0.00 0.00 2.66
233 258 3.682858 TGCACGGAAATACTCTAGCAAAC 59.317 43.478 0.00 0.00 0.00 2.93
234 259 3.932710 CTGCACGGAAATACTCTAGCAAA 59.067 43.478 0.00 0.00 0.00 3.68
235 260 3.056107 ACTGCACGGAAATACTCTAGCAA 60.056 43.478 0.00 0.00 0.00 3.91
236 261 2.496070 ACTGCACGGAAATACTCTAGCA 59.504 45.455 0.00 0.00 0.00 3.49
264 298 7.104043 ACGCACCGAATTAGCCTATAATATA 57.896 36.000 0.00 0.00 0.00 0.86
266 300 5.395682 ACGCACCGAATTAGCCTATAATA 57.604 39.130 0.00 0.00 0.00 0.98
275 318 1.731098 GCCCAAAACGCACCGAATTAG 60.731 52.381 0.00 0.00 0.00 1.73
276 319 0.241481 GCCCAAAACGCACCGAATTA 59.759 50.000 0.00 0.00 0.00 1.40
286 329 2.736192 CAAAATAAGCCAGCCCAAAACG 59.264 45.455 0.00 0.00 0.00 3.60
287 330 4.001618 TCAAAATAAGCCAGCCCAAAAC 57.998 40.909 0.00 0.00 0.00 2.43
288 331 4.906747 ATCAAAATAAGCCAGCCCAAAA 57.093 36.364 0.00 0.00 0.00 2.44
289 332 4.041444 ACAATCAAAATAAGCCAGCCCAAA 59.959 37.500 0.00 0.00 0.00 3.28
290 333 3.582208 ACAATCAAAATAAGCCAGCCCAA 59.418 39.130 0.00 0.00 0.00 4.12
291 334 3.172339 ACAATCAAAATAAGCCAGCCCA 58.828 40.909 0.00 0.00 0.00 5.36
292 335 3.893326 ACAATCAAAATAAGCCAGCCC 57.107 42.857 0.00 0.00 0.00 5.19
293 336 7.848223 AATAAACAATCAAAATAAGCCAGCC 57.152 32.000 0.00 0.00 0.00 4.85
309 352 9.995003 TCGAAAACCCTAGTAGTAAATAAACAA 57.005 29.630 0.00 0.00 0.00 2.83
315 358 8.075761 ACAGATCGAAAACCCTAGTAGTAAAT 57.924 34.615 0.00 0.00 0.00 1.40
316 359 7.472334 ACAGATCGAAAACCCTAGTAGTAAA 57.528 36.000 0.00 0.00 0.00 2.01
317 360 7.177216 TGAACAGATCGAAAACCCTAGTAGTAA 59.823 37.037 0.00 0.00 0.00 2.24
318 361 6.660521 TGAACAGATCGAAAACCCTAGTAGTA 59.339 38.462 0.00 0.00 0.00 1.82
319 362 5.479375 TGAACAGATCGAAAACCCTAGTAGT 59.521 40.000 0.00 0.00 0.00 2.73
320 363 5.805994 GTGAACAGATCGAAAACCCTAGTAG 59.194 44.000 0.00 0.00 0.00 2.57
321 364 5.479375 AGTGAACAGATCGAAAACCCTAGTA 59.521 40.000 0.00 0.00 0.00 1.82
322 365 4.283722 AGTGAACAGATCGAAAACCCTAGT 59.716 41.667 0.00 0.00 0.00 2.57
332 375 3.320826 TGAGGTCAAAGTGAACAGATCGA 59.679 43.478 0.00 0.00 36.30 3.59
337 380 2.498167 CCCTGAGGTCAAAGTGAACAG 58.502 52.381 0.00 0.00 36.30 3.16
344 387 2.859165 TAACTGCCCTGAGGTCAAAG 57.141 50.000 0.00 0.00 34.57 2.77
364 407 9.974980 GTAGTTGGAATAAAAAGGTCATTTTGA 57.025 29.630 0.00 0.00 40.27 2.69
365 408 9.203421 GGTAGTTGGAATAAAAAGGTCATTTTG 57.797 33.333 0.00 0.00 40.27 2.44
463 518 5.048782 GTCAGCAACAGGTAATTCATCACAA 60.049 40.000 0.00 0.00 0.00 3.33
573 632 4.288626 TGGTTACAGAAGAAAGCTATGGGT 59.711 41.667 0.00 0.00 0.00 4.51
652 712 2.290641 TCTTCCAAGTTTCTCGCTTTGC 59.709 45.455 0.00 0.00 0.00 3.68
653 713 4.756084 ATCTTCCAAGTTTCTCGCTTTG 57.244 40.909 0.00 0.00 0.00 2.77
777 875 1.336332 CCTGTCTTGACTGTGGACTCG 60.336 57.143 2.35 0.00 0.00 4.18
785 883 1.067283 ACTCGATGCCTGTCTTGACTG 60.067 52.381 2.35 1.85 0.00 3.51
797 903 7.541122 ACTTATTTTCTTTAGGACTCGATGC 57.459 36.000 0.00 0.00 0.00 3.91
837 945 8.988060 TGACTCTTCCCTATAACATATGAAACA 58.012 33.333 10.38 0.00 0.00 2.83
838 946 9.832445 TTGACTCTTCCCTATAACATATGAAAC 57.168 33.333 10.38 0.00 0.00 2.78
840 948 9.434275 TCTTGACTCTTCCCTATAACATATGAA 57.566 33.333 10.38 0.00 0.00 2.57
841 949 9.607333 ATCTTGACTCTTCCCTATAACATATGA 57.393 33.333 10.38 0.00 0.00 2.15
876 988 7.201821 CCTGGTCAAAAGAAAGAAAGAAAGCTA 60.202 37.037 0.00 0.00 0.00 3.32
880 992 7.475137 TTCCTGGTCAAAAGAAAGAAAGAAA 57.525 32.000 0.00 0.00 0.00 2.52
891 1003 6.147656 GGCAAACATAATTTCCTGGTCAAAAG 59.852 38.462 0.00 0.00 0.00 2.27
983 1095 5.593909 TGAGGCATTCTGTTTTTCTGAAAGA 59.406 36.000 2.75 0.00 44.68 2.52
984 1096 5.835257 TGAGGCATTCTGTTTTTCTGAAAG 58.165 37.500 2.75 0.00 37.50 2.62
1086 1200 4.320057 GCATCACACTGAGTTCTTTCAAGG 60.320 45.833 0.00 0.00 0.00 3.61
1088 1202 3.565482 GGCATCACACTGAGTTCTTTCAA 59.435 43.478 0.00 0.00 0.00 2.69
1095 1209 0.773644 AAGGGGCATCACACTGAGTT 59.226 50.000 0.00 0.00 0.00 3.01
1182 1296 1.309006 GGACCTCTCCTCCCGGTTA 59.691 63.158 0.00 0.00 33.07 2.85
1206 1320 3.000322 CCATCACGTAATCTCTTTGCGAC 60.000 47.826 2.95 0.00 45.00 5.19
1266 1380 1.403687 GGAGGTCCATAGCGCCTCTT 61.404 60.000 2.29 0.00 45.91 2.85
1368 1482 1.200483 CGTCCAATGATTCCTCGTCG 58.800 55.000 0.00 0.00 0.00 5.12
1370 1484 1.548719 TGACGTCCAATGATTCCTCGT 59.451 47.619 14.12 0.00 0.00 4.18
1389 1503 0.798776 GTGCTTCACGGATTCCAGTG 59.201 55.000 16.63 16.63 39.55 3.66
1392 1506 0.976641 AGAGTGCTTCACGGATTCCA 59.023 50.000 3.09 0.00 39.64 3.53
1464 1578 4.591321 AGAATTCCTTAGTTGCCCATCA 57.409 40.909 0.65 0.00 0.00 3.07
1546 1660 2.413142 GCTGCTCACCATTGGAGGC 61.413 63.158 10.37 10.50 32.96 4.70
1718 1832 0.321653 CCTTGCTACCAAACTCGGCT 60.322 55.000 0.00 0.00 0.00 5.52
1719 1833 1.923227 GCCTTGCTACCAAACTCGGC 61.923 60.000 0.00 0.00 33.29 5.54
1824 1938 6.886459 ACTTAGGCATGTCAATATCAAACTGT 59.114 34.615 0.00 0.00 0.00 3.55
1863 1977 0.528017 GCCTTGGTAGCTTTTCTGCC 59.472 55.000 0.00 0.00 46.48 4.85
1911 2025 2.858476 TCTTGCCCTGCCTTCCCA 60.858 61.111 0.00 0.00 0.00 4.37
1982 2096 1.526686 CACTGCTGGACCTTGTGCA 60.527 57.895 0.00 0.00 32.07 4.57
1999 2113 6.349243 AGGAAAATTCATCTGAACATTGCA 57.651 33.333 11.11 0.00 36.80 4.08
2061 2175 0.107831 AACCAACTTCAGTAGCCGCA 59.892 50.000 0.00 0.00 0.00 5.69
2084 2198 6.583806 CCTTTGTTCTCTTTGGATTGATTTCG 59.416 38.462 0.00 0.00 0.00 3.46
2201 2315 5.883661 TCTGTTTATTGCTGCTTCTATTGC 58.116 37.500 0.00 0.00 0.00 3.56
2236 2350 3.645687 CTCCTTTCTCCCTTCCTATCAGG 59.354 52.174 0.00 0.00 36.46 3.86
2309 2429 6.861055 TGCAACCGATTTCTTATCAGTTTTTC 59.139 34.615 0.00 0.00 0.00 2.29
2313 2433 5.647658 TGATGCAACCGATTTCTTATCAGTT 59.352 36.000 0.00 0.00 0.00 3.16
2373 2493 8.003820 GAACTACCAGGTGTTCTTCGTAAGATT 61.004 40.741 19.74 0.00 39.57 2.40
2374 2494 6.571925 GAACTACCAGGTGTTCTTCGTAAGAT 60.572 42.308 19.74 0.00 39.57 2.40
2500 2621 5.254901 AGGTAGTTTCGTGTCTCAGATAGT 58.745 41.667 0.00 0.00 0.00 2.12
2514 2635 6.485648 TCTTTTACCAGCTTCAAGGTAGTTTC 59.514 38.462 0.00 0.00 41.13 2.78
2522 2643 5.241506 TGGTCATTCTTTTACCAGCTTCAAG 59.758 40.000 0.00 0.00 38.36 3.02
2627 2749 5.221244 ACGCCTGATTTAACTGAAAAGCTTT 60.221 36.000 5.69 5.69 0.00 3.51
2629 2751 3.821033 ACGCCTGATTTAACTGAAAAGCT 59.179 39.130 0.00 0.00 0.00 3.74
2632 2754 5.310451 AGGTACGCCTGATTTAACTGAAAA 58.690 37.500 0.00 0.00 45.05 2.29
2648 2770 4.165779 CAACCATTTCATTCAAGGTACGC 58.834 43.478 0.00 0.00 31.10 4.42
2743 2865 3.942829 TCTGTGGATGGACAATCAGTTC 58.057 45.455 0.00 0.00 36.98 3.01
2801 2923 1.545428 GGTTCTGTGTCCCAATCAGCA 60.545 52.381 0.00 0.00 0.00 4.41
2924 3067 5.847304 TCACATATCAGCAGTAGATTGGAC 58.153 41.667 0.00 0.00 0.00 4.02
3023 3166 4.377839 TCAGCAGTAGATGTAGCACTTC 57.622 45.455 0.00 0.00 31.77 3.01
3056 3199 7.841956 TGTGAAACCTTTTCTCAAAACCATAA 58.158 30.769 1.87 0.00 34.36 1.90
3071 3214 6.588719 TTGCTAATTGCTATGTGAAACCTT 57.411 33.333 0.00 0.00 43.37 3.50
3073 3216 7.832503 AATTTGCTAATTGCTATGTGAAACC 57.167 32.000 5.29 0.00 43.37 3.27
3142 3285 8.952278 ACCGTGCAGTCAAATATTCTTAAATTA 58.048 29.630 0.00 0.00 0.00 1.40
3192 3335 4.850193 CATGGCACTCCCTTGGTT 57.150 55.556 0.00 0.00 35.62 3.67
3195 3338 1.001181 CAAAACCATGGCACTCCCTTG 59.999 52.381 13.04 1.37 38.24 3.61
3267 3412 6.162777 TCCTTTTTAATAAATGGCTGTGTGC 58.837 36.000 0.00 0.00 38.07 4.57
3295 3440 5.605534 TGTAACCCACAAACAAAATCATGG 58.394 37.500 0.00 0.00 32.95 3.66
3365 3542 4.632153 TGTTAGTGCCAGAACTTCTTCTC 58.368 43.478 0.00 0.00 34.20 2.87
3366 3543 4.689612 TGTTAGTGCCAGAACTTCTTCT 57.310 40.909 0.00 0.00 37.19 2.85
3406 3585 2.023673 CCGCTAAAATCTTCATGGGCA 58.976 47.619 0.00 0.00 0.00 5.36
3409 3588 2.618709 GGACCCGCTAAAATCTTCATGG 59.381 50.000 0.00 0.00 0.00 3.66
3412 3591 2.304761 ACTGGACCCGCTAAAATCTTCA 59.695 45.455 0.00 0.00 0.00 3.02
3521 3700 3.769739 TGACTTGCTGCTTAGGAGAAA 57.230 42.857 4.57 0.00 0.00 2.52
3562 3741 0.531532 ATGCGTCAGTGCCTATGAGC 60.532 55.000 0.00 0.00 0.00 4.26
3573 3752 2.041966 GGTCGTAATCGTATGCGTCAG 58.958 52.381 2.37 0.00 39.49 3.51
3583 3762 3.483734 CTCGATCAGATGGTCGTAATCG 58.516 50.000 14.60 4.53 38.85 3.34
3642 3821 3.699538 TGCTATGTCCACGTAGAGTTCAT 59.300 43.478 9.73 0.00 37.59 2.57
3653 3832 1.945394 CTGCTCCATTGCTATGTCCAC 59.055 52.381 7.37 0.00 0.00 4.02
3700 3879 6.437477 TCCTGTATCCAGTGTAATATAGGCTG 59.563 42.308 15.34 0.00 36.93 4.85
3706 3885 5.473273 TGGGTCCTGTATCCAGTGTAATAT 58.527 41.667 0.00 0.00 31.40 1.28
3720 3899 1.002134 CCGCATTTCTGGGTCCTGT 60.002 57.895 0.00 0.00 33.64 4.00
3782 3961 2.107141 CTTCCGAGTCCCATCGCC 59.893 66.667 0.00 0.00 41.37 5.54
3889 4068 1.215647 GCTGTTGATCGACGGGTCT 59.784 57.895 21.25 0.00 0.00 3.85
3910 4089 2.946084 TGCCACCCCATGTCCCAT 60.946 61.111 0.00 0.00 0.00 4.00
3993 4172 0.392193 AACAGCCTCCTCAATGAGCG 60.392 55.000 4.40 0.00 0.00 5.03
4008 4187 5.399301 CAGTTTACCAGCATTTCGAAAACAG 59.601 40.000 15.66 9.13 0.00 3.16
4011 4190 5.506649 GGTCAGTTTACCAGCATTTCGAAAA 60.507 40.000 15.66 0.00 39.50 2.29
4015 4194 2.811431 TGGTCAGTTTACCAGCATTTCG 59.189 45.455 0.00 0.00 44.68 3.46
4139 4318 3.550842 GGAAAACACATGTGAGCAACTCC 60.551 47.826 31.94 20.96 0.00 3.85
4146 4325 3.192001 CCCATCAGGAAAACACATGTGAG 59.808 47.826 31.94 7.29 38.24 3.51
4151 4330 1.077663 AGCCCCATCAGGAAAACACAT 59.922 47.619 0.00 0.00 38.24 3.21
4153 4332 1.632589 AAGCCCCATCAGGAAAACAC 58.367 50.000 0.00 0.00 38.24 3.32
4183 4366 9.708222 GTTATGCACAGATTACAATAGTTTCTG 57.292 33.333 0.00 0.00 40.15 3.02
4192 4375 7.552330 TGCTATGAAGTTATGCACAGATTACAA 59.448 33.333 0.00 0.00 0.00 2.41
4267 4450 5.939764 ATCTATGGCAGATAATTAGCGGA 57.060 39.130 5.00 0.00 42.49 5.54
4268 4451 7.436933 TGATATCTATGGCAGATAATTAGCGG 58.563 38.462 3.98 0.00 46.84 5.52
4269 4452 8.923683 CATGATATCTATGGCAGATAATTAGCG 58.076 37.037 3.98 0.00 46.84 4.26
4270 4453 9.993454 TCATGATATCTATGGCAGATAATTAGC 57.007 33.333 3.98 0.00 46.84 3.09
4287 4474 5.431765 AGGTTGTCCTGTTGTCATGATATC 58.568 41.667 0.00 0.00 43.33 1.63
4294 4481 4.974645 ATAGAAGGTTGTCCTGTTGTCA 57.025 40.909 0.00 0.00 44.35 3.58
4304 4491 8.762645 TCTCTTCATACATGAATAGAAGGTTGT 58.237 33.333 14.31 0.00 42.96 3.32
4357 4547 4.654915 TCATCTCTTTGGCATTGTCAAGA 58.345 39.130 3.61 0.00 0.00 3.02
4362 4552 4.264253 TCGATTCATCTCTTTGGCATTGT 58.736 39.130 0.00 0.00 0.00 2.71
4368 4558 5.990386 AGACATGATCGATTCATCTCTTTGG 59.010 40.000 0.00 0.00 43.40 3.28
4380 4570 9.636879 CATTATCTTCAGTTAGACATGATCGAT 57.363 33.333 0.00 0.00 0.00 3.59
4381 4571 8.633561 ACATTATCTTCAGTTAGACATGATCGA 58.366 33.333 0.00 0.00 0.00 3.59
4457 4657 9.226345 GTATAAAAAGACATAGCATTTGACAGC 57.774 33.333 0.00 0.00 0.00 4.40
4467 4667 8.370493 TGCTCATGAGTATAAAAAGACATAGC 57.630 34.615 23.38 4.76 0.00 2.97
4483 4683 5.618236 TCTCAAGGGATTAATGCTCATGAG 58.382 41.667 18.84 18.84 34.54 2.90
4491 4691 9.573166 TGTAATTACCATCTCAAGGGATTAATG 57.427 33.333 13.01 0.00 0.00 1.90
4499 4699 9.838339 AACTTATCTGTAATTACCATCTCAAGG 57.162 33.333 13.01 0.00 0.00 3.61
4516 4718 7.095857 GCGGAGATGAACATAGAAACTTATCTG 60.096 40.741 0.00 0.00 0.00 2.90
4532 4734 1.511850 CAATATGCCGCGGAGATGAA 58.488 50.000 33.48 7.48 0.00 2.57
4552 4754 2.386661 ACACATGCTCCCGAAAGTAG 57.613 50.000 0.00 0.00 0.00 2.57
4563 5037 5.796424 AATTCAGAAAGGAAACACATGCT 57.204 34.783 0.00 0.00 0.00 3.79
4608 5082 6.158023 ACAATCCTTTGGTACTACCGATAG 57.842 41.667 0.62 0.00 42.58 2.08
4611 5085 4.529377 AGAACAATCCTTTGGTACTACCGA 59.471 41.667 0.62 0.00 42.58 4.69
4651 5125 1.039856 TTGCTCTGGAAAAGGCAACC 58.960 50.000 0.00 0.00 37.24 3.77
4655 5129 2.888834 TTGTTTGCTCTGGAAAAGGC 57.111 45.000 0.00 0.00 0.00 4.35
4662 5136 4.685924 AGACAACATTTTGTTTGCTCTGG 58.314 39.130 0.00 0.00 46.43 3.86
4672 5146 5.907391 GTCCGTTTACAGAGACAACATTTTG 59.093 40.000 0.00 0.00 38.83 2.44
4683 5160 3.119779 GGTGAGAGAGTCCGTTTACAGAG 60.120 52.174 0.00 0.00 0.00 3.35
4692 5169 0.727970 CTACGTGGTGAGAGAGTCCG 59.272 60.000 0.00 0.00 0.00 4.79
4702 5179 3.363970 GCTCACAACAATTCTACGTGGTG 60.364 47.826 0.00 0.00 38.24 4.17
4704 5181 3.067106 AGCTCACAACAATTCTACGTGG 58.933 45.455 0.00 0.00 0.00 4.94
4706 5183 7.435068 AAATTAGCTCACAACAATTCTACGT 57.565 32.000 0.00 0.00 0.00 3.57
4707 5184 8.629986 CAAAAATTAGCTCACAACAATTCTACG 58.370 33.333 0.00 0.00 0.00 3.51
4709 5186 9.897744 CTCAAAAATTAGCTCACAACAATTCTA 57.102 29.630 0.00 0.00 0.00 2.10
4732 5209 9.539825 GCTCTCTATGATCTAAAATTTCACTCA 57.460 33.333 0.00 0.00 0.00 3.41
4735 5212 9.539825 TCTGCTCTCTATGATCTAAAATTTCAC 57.460 33.333 0.00 0.00 0.00 3.18
4738 5215 9.336171 GGTTCTGCTCTCTATGATCTAAAATTT 57.664 33.333 0.00 0.00 0.00 1.82
4739 5216 8.713036 AGGTTCTGCTCTCTATGATCTAAAATT 58.287 33.333 0.00 0.00 0.00 1.82
4740 5217 8.261349 AGGTTCTGCTCTCTATGATCTAAAAT 57.739 34.615 0.00 0.00 0.00 1.82
4741 5218 7.667575 AGGTTCTGCTCTCTATGATCTAAAA 57.332 36.000 0.00 0.00 0.00 1.52
4742 5219 7.124901 ACAAGGTTCTGCTCTCTATGATCTAAA 59.875 37.037 0.00 0.00 0.00 1.85
4743 5220 6.609212 ACAAGGTTCTGCTCTCTATGATCTAA 59.391 38.462 0.00 0.00 0.00 2.10
4745 5222 4.961730 ACAAGGTTCTGCTCTCTATGATCT 59.038 41.667 0.00 0.00 0.00 2.75
4746 5223 5.275067 ACAAGGTTCTGCTCTCTATGATC 57.725 43.478 0.00 0.00 0.00 2.92
4747 5224 6.992664 ATACAAGGTTCTGCTCTCTATGAT 57.007 37.500 0.00 0.00 0.00 2.45
4749 5226 9.553064 AAAATATACAAGGTTCTGCTCTCTATG 57.447 33.333 0.00 0.00 0.00 2.23
4750 5227 9.553064 CAAAATATACAAGGTTCTGCTCTCTAT 57.447 33.333 0.00 0.00 0.00 1.98
4757 5243 6.036470 GCCTTCAAAATATACAAGGTTCTGC 58.964 40.000 0.00 0.00 38.17 4.26
4785 5271 0.033109 GGTTCAAGAATGGGAGGGGG 60.033 60.000 0.00 0.00 0.00 5.40
4791 5277 5.393461 GCACAAAGATAGGTTCAAGAATGGG 60.393 44.000 0.00 0.00 0.00 4.00
4794 5280 6.240894 TGAGCACAAAGATAGGTTCAAGAAT 58.759 36.000 0.00 0.00 0.00 2.40
4797 5283 4.999950 ACTGAGCACAAAGATAGGTTCAAG 59.000 41.667 0.00 0.00 0.00 3.02
4798 5284 4.973168 ACTGAGCACAAAGATAGGTTCAA 58.027 39.130 0.00 0.00 0.00 2.69
4800 5286 4.826556 AGACTGAGCACAAAGATAGGTTC 58.173 43.478 0.00 0.00 0.00 3.62
4801 5287 4.619394 CGAGACTGAGCACAAAGATAGGTT 60.619 45.833 0.00 0.00 0.00 3.50
4802 5288 3.119316 CGAGACTGAGCACAAAGATAGGT 60.119 47.826 0.00 0.00 0.00 3.08
4803 5289 3.443037 CGAGACTGAGCACAAAGATAGG 58.557 50.000 0.00 0.00 0.00 2.57
4804 5290 2.857152 GCGAGACTGAGCACAAAGATAG 59.143 50.000 0.00 0.00 0.00 2.08
4805 5291 2.493675 AGCGAGACTGAGCACAAAGATA 59.506 45.455 0.00 0.00 35.48 1.98
4806 5292 1.274728 AGCGAGACTGAGCACAAAGAT 59.725 47.619 0.00 0.00 35.48 2.40
4807 5293 0.676184 AGCGAGACTGAGCACAAAGA 59.324 50.000 0.00 0.00 35.48 2.52
4808 5294 1.066914 GAGCGAGACTGAGCACAAAG 58.933 55.000 0.00 0.00 35.48 2.77
4809 5295 0.676184 AGAGCGAGACTGAGCACAAA 59.324 50.000 0.00 0.00 35.48 2.83
4810 5296 0.038801 CAGAGCGAGACTGAGCACAA 60.039 55.000 0.00 0.00 37.54 3.33
4811 5297 1.583477 CAGAGCGAGACTGAGCACA 59.417 57.895 0.00 0.00 37.54 4.57
4812 5298 1.805134 GCAGAGCGAGACTGAGCAC 60.805 63.158 0.00 0.00 37.54 4.40
4813 5299 1.530876 AAGCAGAGCGAGACTGAGCA 61.531 55.000 0.00 0.00 37.54 4.26
4814 5300 0.801836 GAAGCAGAGCGAGACTGAGC 60.802 60.000 0.00 0.00 37.54 4.26
4815 5301 0.525311 TGAAGCAGAGCGAGACTGAG 59.475 55.000 0.00 0.00 37.54 3.35
4816 5302 0.961753 TTGAAGCAGAGCGAGACTGA 59.038 50.000 0.00 0.00 37.54 3.41
4817 5303 1.348276 CTTGAAGCAGAGCGAGACTG 58.652 55.000 0.00 0.00 38.27 3.51
4818 5304 0.389687 GCTTGAAGCAGAGCGAGACT 60.390 55.000 13.09 0.00 41.89 3.24
4819 5305 0.389687 AGCTTGAAGCAGAGCGAGAC 60.390 55.000 20.45 0.00 45.56 3.36
4820 5306 0.319728 AAGCTTGAAGCAGAGCGAGA 59.680 50.000 20.45 0.00 45.56 4.04
4821 5307 2.001812 TAAGCTTGAAGCAGAGCGAG 57.998 50.000 20.45 0.00 45.56 5.03
4822 5308 2.167281 AGATAAGCTTGAAGCAGAGCGA 59.833 45.455 20.45 0.00 45.56 4.93
4823 5309 2.548875 AGATAAGCTTGAAGCAGAGCG 58.451 47.619 20.45 0.00 45.56 5.03
4834 5320 4.357325 TCTCTCCCTCACAAGATAAGCTT 58.643 43.478 3.48 3.48 37.29 3.74
4835 5321 3.987745 TCTCTCCCTCACAAGATAAGCT 58.012 45.455 0.00 0.00 0.00 3.74
4836 5322 4.953940 ATCTCTCCCTCACAAGATAAGC 57.046 45.455 0.00 0.00 0.00 3.09
4837 5323 6.729690 AGAATCTCTCCCTCACAAGATAAG 57.270 41.667 0.00 0.00 0.00 1.73
4838 5324 8.007153 TCATAGAATCTCTCCCTCACAAGATAA 58.993 37.037 0.00 0.00 0.00 1.75
4839 5325 7.530435 TCATAGAATCTCTCCCTCACAAGATA 58.470 38.462 0.00 0.00 0.00 1.98
4840 5326 6.380414 TCATAGAATCTCTCCCTCACAAGAT 58.620 40.000 0.00 0.00 0.00 2.40
4841 5327 5.770919 TCATAGAATCTCTCCCTCACAAGA 58.229 41.667 0.00 0.00 0.00 3.02
4842 5328 5.598005 ACTCATAGAATCTCTCCCTCACAAG 59.402 44.000 0.00 0.00 0.00 3.16
4843 5329 5.523588 ACTCATAGAATCTCTCCCTCACAA 58.476 41.667 0.00 0.00 0.00 3.33
4844 5330 5.136068 ACTCATAGAATCTCTCCCTCACA 57.864 43.478 0.00 0.00 0.00 3.58
4845 5331 5.596361 TGAACTCATAGAATCTCTCCCTCAC 59.404 44.000 0.00 0.00 0.00 3.51
4846 5332 5.770919 TGAACTCATAGAATCTCTCCCTCA 58.229 41.667 0.00 0.00 0.00 3.86
4847 5333 6.295236 CCATGAACTCATAGAATCTCTCCCTC 60.295 46.154 0.00 0.00 34.26 4.30
4848 5334 5.543405 CCATGAACTCATAGAATCTCTCCCT 59.457 44.000 0.00 0.00 34.26 4.20
4849 5335 5.279910 CCCATGAACTCATAGAATCTCTCCC 60.280 48.000 0.00 0.00 34.26 4.30
4850 5336 5.541868 TCCCATGAACTCATAGAATCTCTCC 59.458 44.000 0.00 0.00 34.26 3.71
4851 5337 6.493115 TCTCCCATGAACTCATAGAATCTCTC 59.507 42.308 0.00 0.00 34.26 3.20
4852 5338 6.380414 TCTCCCATGAACTCATAGAATCTCT 58.620 40.000 0.00 0.00 34.26 3.10
4853 5339 6.267471 ACTCTCCCATGAACTCATAGAATCTC 59.733 42.308 0.00 0.00 34.26 2.75
4854 5340 6.142498 ACTCTCCCATGAACTCATAGAATCT 58.858 40.000 0.00 0.00 34.26 2.40
4855 5341 6.418057 ACTCTCCCATGAACTCATAGAATC 57.582 41.667 0.00 0.00 34.26 2.52
4856 5342 6.821616 AACTCTCCCATGAACTCATAGAAT 57.178 37.500 0.00 0.00 34.26 2.40
4857 5343 6.213397 TCAAACTCTCCCATGAACTCATAGAA 59.787 38.462 0.00 0.00 34.26 2.10
4858 5344 5.721480 TCAAACTCTCCCATGAACTCATAGA 59.279 40.000 0.00 0.00 34.26 1.98
4859 5345 5.982356 TCAAACTCTCCCATGAACTCATAG 58.018 41.667 0.00 0.00 34.26 2.23
4860 5346 6.566079 ATCAAACTCTCCCATGAACTCATA 57.434 37.500 0.00 0.00 34.26 2.15
4861 5347 4.916041 TCAAACTCTCCCATGAACTCAT 57.084 40.909 0.00 0.00 36.96 2.90
4862 5348 4.916041 ATCAAACTCTCCCATGAACTCA 57.084 40.909 0.00 0.00 0.00 3.41
4863 5349 5.248640 TCAATCAAACTCTCCCATGAACTC 58.751 41.667 0.00 0.00 0.00 3.01
4864 5350 5.246981 TCAATCAAACTCTCCCATGAACT 57.753 39.130 0.00 0.00 0.00 3.01
4865 5351 5.964958 TTCAATCAAACTCTCCCATGAAC 57.035 39.130 0.00 0.00 0.00 3.18
4866 5352 6.975196 TTTTCAATCAAACTCTCCCATGAA 57.025 33.333 0.00 0.00 0.00 2.57
4867 5353 6.950041 AGATTTTCAATCAAACTCTCCCATGA 59.050 34.615 0.00 0.00 30.06 3.07
4868 5354 7.166691 AGATTTTCAATCAAACTCTCCCATG 57.833 36.000 0.00 0.00 30.06 3.66
4869 5355 7.787623 AAGATTTTCAATCAAACTCTCCCAT 57.212 32.000 0.00 0.00 33.87 4.00
4870 5356 7.601705 AAAGATTTTCAATCAAACTCTCCCA 57.398 32.000 0.00 0.00 33.87 4.37
4871 5357 9.981114 TTAAAAGATTTTCAATCAAACTCTCCC 57.019 29.630 0.00 0.00 33.87 4.30
4887 5373 9.971922 CACAAGGATGAACTTCTTAAAAGATTT 57.028 29.630 0.00 0.00 34.49 2.17
4888 5374 9.354673 TCACAAGGATGAACTTCTTAAAAGATT 57.645 29.630 0.00 0.00 34.49 2.40
4889 5375 8.787852 GTCACAAGGATGAACTTCTTAAAAGAT 58.212 33.333 0.00 0.00 34.49 2.40
4890 5376 7.993183 AGTCACAAGGATGAACTTCTTAAAAGA 59.007 33.333 4.94 0.00 0.00 2.52
4891 5377 8.159344 AGTCACAAGGATGAACTTCTTAAAAG 57.841 34.615 0.00 0.00 0.00 2.27
4892 5378 8.519799 AAGTCACAAGGATGAACTTCTTAAAA 57.480 30.769 0.00 0.00 33.75 1.52
4893 5379 8.405531 CAAAGTCACAAGGATGAACTTCTTAAA 58.594 33.333 0.00 0.00 36.09 1.52
4894 5380 7.468631 GCAAAGTCACAAGGATGAACTTCTTAA 60.469 37.037 0.00 0.00 36.09 1.85
4895 5381 6.017109 GCAAAGTCACAAGGATGAACTTCTTA 60.017 38.462 0.00 0.00 36.09 2.10
4896 5382 5.221126 GCAAAGTCACAAGGATGAACTTCTT 60.221 40.000 0.00 0.00 36.09 2.52
4897 5383 4.276926 GCAAAGTCACAAGGATGAACTTCT 59.723 41.667 0.00 0.00 36.09 2.85
4898 5384 4.276926 AGCAAAGTCACAAGGATGAACTTC 59.723 41.667 0.00 0.00 36.09 3.01
4899 5385 4.210331 AGCAAAGTCACAAGGATGAACTT 58.790 39.130 0.00 0.00 37.54 2.66
4900 5386 3.825328 AGCAAAGTCACAAGGATGAACT 58.175 40.909 0.00 0.00 0.00 3.01
4901 5387 4.574599 AAGCAAAGTCACAAGGATGAAC 57.425 40.909 0.00 0.00 0.00 3.18
4902 5388 4.737352 GCAAAGCAAAGTCACAAGGATGAA 60.737 41.667 0.00 0.00 0.00 2.57
4903 5389 3.243501 GCAAAGCAAAGTCACAAGGATGA 60.244 43.478 0.00 0.00 0.00 2.92
4904 5390 3.054878 GCAAAGCAAAGTCACAAGGATG 58.945 45.455 0.00 0.00 0.00 3.51
4905 5391 2.961062 AGCAAAGCAAAGTCACAAGGAT 59.039 40.909 0.00 0.00 0.00 3.24
4906 5392 2.378038 AGCAAAGCAAAGTCACAAGGA 58.622 42.857 0.00 0.00 0.00 3.36
4907 5393 2.877043 AGCAAAGCAAAGTCACAAGG 57.123 45.000 0.00 0.00 0.00 3.61
4908 5394 4.037858 AGAAGCAAAGCAAAGTCACAAG 57.962 40.909 0.00 0.00 0.00 3.16
4909 5395 3.443329 TGAGAAGCAAAGCAAAGTCACAA 59.557 39.130 0.00 0.00 0.00 3.33
4910 5396 3.016031 TGAGAAGCAAAGCAAAGTCACA 58.984 40.909 0.00 0.00 0.00 3.58
4911 5397 3.065925 AGTGAGAAGCAAAGCAAAGTCAC 59.934 43.478 0.00 0.00 34.55 3.67
4912 5398 3.282021 AGTGAGAAGCAAAGCAAAGTCA 58.718 40.909 0.00 0.00 0.00 3.41
4913 5399 3.563390 AGAGTGAGAAGCAAAGCAAAGTC 59.437 43.478 0.00 0.00 0.00 3.01
4914 5400 3.549794 AGAGTGAGAAGCAAAGCAAAGT 58.450 40.909 0.00 0.00 0.00 2.66
4915 5401 4.288531 CAAGAGTGAGAAGCAAAGCAAAG 58.711 43.478 0.00 0.00 0.00 2.77
4916 5402 3.489738 GCAAGAGTGAGAAGCAAAGCAAA 60.490 43.478 0.00 0.00 0.00 3.68
4917 5403 2.033801 GCAAGAGTGAGAAGCAAAGCAA 59.966 45.455 0.00 0.00 0.00 3.91
4918 5404 1.605710 GCAAGAGTGAGAAGCAAAGCA 59.394 47.619 0.00 0.00 0.00 3.91
4919 5405 1.605710 TGCAAGAGTGAGAAGCAAAGC 59.394 47.619 0.00 0.00 31.42 3.51
4920 5406 2.225963 CCTGCAAGAGTGAGAAGCAAAG 59.774 50.000 0.00 0.00 34.07 2.77
4921 5407 2.224606 CCTGCAAGAGTGAGAAGCAAA 58.775 47.619 0.00 0.00 34.07 3.68
4922 5408 1.544093 CCCTGCAAGAGTGAGAAGCAA 60.544 52.381 0.00 0.00 34.07 3.91
4923 5409 0.035881 CCCTGCAAGAGTGAGAAGCA 59.964 55.000 0.00 0.00 34.07 3.91
4924 5410 0.036022 ACCCTGCAAGAGTGAGAAGC 59.964 55.000 0.00 0.00 34.07 3.86
4925 5411 1.071385 ACACCCTGCAAGAGTGAGAAG 59.929 52.381 15.19 0.00 34.07 2.85
4926 5412 1.131638 ACACCCTGCAAGAGTGAGAA 58.868 50.000 15.19 0.00 34.07 2.87
4927 5413 0.394192 CACACCCTGCAAGAGTGAGA 59.606 55.000 15.19 0.00 34.47 3.27
4928 5414 1.233285 GCACACCCTGCAAGAGTGAG 61.233 60.000 15.25 9.77 46.29 3.51
4929 5415 1.227943 GCACACCCTGCAAGAGTGA 60.228 57.895 15.25 0.00 46.29 3.41
4930 5416 3.348236 GCACACCCTGCAAGAGTG 58.652 61.111 8.91 8.91 46.29 3.51
4937 5423 3.605749 TTAGAGGCGCACACCCTGC 62.606 63.158 10.83 0.00 43.21 4.85
4938 5424 1.448540 CTTAGAGGCGCACACCCTG 60.449 63.158 10.83 0.00 31.41 4.45
4939 5425 2.982130 CTTAGAGGCGCACACCCT 59.018 61.111 10.83 0.00 34.77 4.34
4940 5426 2.820037 GCTTAGAGGCGCACACCC 60.820 66.667 10.83 0.00 0.00 4.61
4947 5433 5.828942 TGAAGGTTCATCGCTTAGAGGCG 62.829 52.174 0.00 0.00 43.40 5.52
4948 5434 2.205911 GAAGGTTCATCGCTTAGAGGC 58.794 52.381 0.00 0.00 0.00 4.70
4949 5435 3.526931 TGAAGGTTCATCGCTTAGAGG 57.473 47.619 0.00 0.00 31.01 3.69
4950 5436 4.328440 CACTTGAAGGTTCATCGCTTAGAG 59.672 45.833 0.00 0.00 37.00 2.43
4951 5437 4.245660 CACTTGAAGGTTCATCGCTTAGA 58.754 43.478 0.00 0.00 37.00 2.10
4952 5438 3.997021 ACACTTGAAGGTTCATCGCTTAG 59.003 43.478 0.00 0.00 37.00 2.18
4953 5439 3.994392 GACACTTGAAGGTTCATCGCTTA 59.006 43.478 0.00 0.00 37.00 3.09
4954 5440 2.808543 GACACTTGAAGGTTCATCGCTT 59.191 45.455 0.00 0.00 37.00 4.68
4955 5441 2.417719 GACACTTGAAGGTTCATCGCT 58.582 47.619 0.00 0.00 37.00 4.93
4956 5442 1.126846 CGACACTTGAAGGTTCATCGC 59.873 52.381 0.00 0.00 37.00 4.58
4957 5443 2.155732 CACGACACTTGAAGGTTCATCG 59.844 50.000 10.43 10.43 40.11 3.84
4958 5444 2.480419 CCACGACACTTGAAGGTTCATC 59.520 50.000 0.00 0.00 37.00 2.92
4959 5445 2.104111 TCCACGACACTTGAAGGTTCAT 59.896 45.455 0.00 0.00 37.00 2.57
4960 5446 1.483004 TCCACGACACTTGAAGGTTCA 59.517 47.619 0.00 0.00 34.92 3.18
4961 5447 2.234300 TCCACGACACTTGAAGGTTC 57.766 50.000 0.00 0.00 0.00 3.62
4962 5448 2.169769 TCTTCCACGACACTTGAAGGTT 59.830 45.455 0.00 0.00 35.91 3.50
4963 5449 1.760613 TCTTCCACGACACTTGAAGGT 59.239 47.619 0.00 0.00 35.91 3.50
4964 5450 2.526304 TCTTCCACGACACTTGAAGG 57.474 50.000 0.00 0.00 35.91 3.46
4965 5451 6.423905 TCTTAATTCTTCCACGACACTTGAAG 59.576 38.462 0.00 0.00 36.42 3.02
4966 5452 6.285224 TCTTAATTCTTCCACGACACTTGAA 58.715 36.000 0.00 0.00 0.00 2.69
4967 5453 5.849510 TCTTAATTCTTCCACGACACTTGA 58.150 37.500 0.00 0.00 0.00 3.02
4968 5454 5.696724 ACTCTTAATTCTTCCACGACACTTG 59.303 40.000 0.00 0.00 0.00 3.16
4969 5455 5.855045 ACTCTTAATTCTTCCACGACACTT 58.145 37.500 0.00 0.00 0.00 3.16
4970 5456 5.470047 ACTCTTAATTCTTCCACGACACT 57.530 39.130 0.00 0.00 0.00 3.55
4971 5457 6.018180 ACAAACTCTTAATTCTTCCACGACAC 60.018 38.462 0.00 0.00 0.00 3.67
4972 5458 6.053005 ACAAACTCTTAATTCTTCCACGACA 58.947 36.000 0.00 0.00 0.00 4.35
4973 5459 6.541111 ACAAACTCTTAATTCTTCCACGAC 57.459 37.500 0.00 0.00 0.00 4.34
4974 5460 7.211573 TGTACAAACTCTTAATTCTTCCACGA 58.788 34.615 0.00 0.00 0.00 4.35
4975 5461 7.416154 TGTACAAACTCTTAATTCTTCCACG 57.584 36.000 0.00 0.00 0.00 4.94
4976 5462 8.290325 CCTTGTACAAACTCTTAATTCTTCCAC 58.710 37.037 10.03 0.00 0.00 4.02
4977 5463 7.040686 GCCTTGTACAAACTCTTAATTCTTCCA 60.041 37.037 10.03 0.00 0.00 3.53
4978 5464 7.040686 TGCCTTGTACAAACTCTTAATTCTTCC 60.041 37.037 10.03 0.00 0.00 3.46
4979 5465 7.803659 GTGCCTTGTACAAACTCTTAATTCTTC 59.196 37.037 10.03 0.00 0.00 2.87
4980 5466 7.519970 CGTGCCTTGTACAAACTCTTAATTCTT 60.520 37.037 10.03 0.00 0.00 2.52
4981 5467 6.073222 CGTGCCTTGTACAAACTCTTAATTCT 60.073 38.462 10.03 0.00 0.00 2.40
4982 5468 6.077838 CGTGCCTTGTACAAACTCTTAATTC 58.922 40.000 10.03 0.00 0.00 2.17
4983 5469 5.048991 CCGTGCCTTGTACAAACTCTTAATT 60.049 40.000 10.03 0.00 0.00 1.40
4984 5470 4.454504 CCGTGCCTTGTACAAACTCTTAAT 59.545 41.667 10.03 0.00 0.00 1.40
4985 5471 3.810941 CCGTGCCTTGTACAAACTCTTAA 59.189 43.478 10.03 0.00 0.00 1.85
4986 5472 3.069872 TCCGTGCCTTGTACAAACTCTTA 59.930 43.478 10.03 0.00 0.00 2.10
4987 5473 2.158871 TCCGTGCCTTGTACAAACTCTT 60.159 45.455 10.03 0.00 0.00 2.85
4988 5474 1.414919 TCCGTGCCTTGTACAAACTCT 59.585 47.619 10.03 0.00 0.00 3.24
4989 5475 1.798813 CTCCGTGCCTTGTACAAACTC 59.201 52.381 10.03 5.22 0.00 3.01
4990 5476 1.414919 TCTCCGTGCCTTGTACAAACT 59.585 47.619 10.03 0.00 0.00 2.66
4991 5477 1.873698 TCTCCGTGCCTTGTACAAAC 58.126 50.000 10.03 4.35 0.00 2.93
4992 5478 2.695359 GATCTCCGTGCCTTGTACAAA 58.305 47.619 10.03 0.00 0.00 2.83
4993 5479 1.403647 CGATCTCCGTGCCTTGTACAA 60.404 52.381 8.28 8.28 0.00 2.41
4994 5480 0.172578 CGATCTCCGTGCCTTGTACA 59.827 55.000 0.00 0.00 0.00 2.90
4995 5481 2.959275 CGATCTCCGTGCCTTGTAC 58.041 57.895 0.00 0.00 0.00 2.90
5005 5491 2.090658 CACACGAAAAAGACGATCTCCG 59.909 50.000 0.00 0.00 45.44 4.63
5006 5492 3.314553 TCACACGAAAAAGACGATCTCC 58.685 45.455 0.00 0.00 34.70 3.71
5007 5493 4.088781 GTCTCACACGAAAAAGACGATCTC 59.911 45.833 0.00 0.00 34.70 2.75
5008 5494 3.982058 GTCTCACACGAAAAAGACGATCT 59.018 43.478 0.00 0.00 34.70 2.75
5009 5495 3.121445 GGTCTCACACGAAAAAGACGATC 59.879 47.826 0.00 0.00 39.20 3.69
5010 5496 3.057734 GGTCTCACACGAAAAAGACGAT 58.942 45.455 0.00 0.00 39.20 3.73
5011 5497 2.159212 TGGTCTCACACGAAAAAGACGA 60.159 45.455 0.00 0.00 39.20 4.20
5012 5498 2.198406 TGGTCTCACACGAAAAAGACG 58.802 47.619 0.00 0.00 39.20 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.