Multiple sequence alignment - TraesCS3A01G149900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G149900 chr3A 100.000 3802 0 0 1 3802 136430906 136427105 0.000000e+00 7022.0
1 TraesCS3A01G149900 chr3A 97.248 109 3 0 3694 3802 146148892 146148784 6.490000e-43 185.0
2 TraesCS3A01G149900 chr3D 93.182 1584 59 15 1841 3402 126235550 126233994 0.000000e+00 2281.0
3 TraesCS3A01G149900 chr3D 92.642 530 20 11 1079 1599 126236365 126235846 0.000000e+00 745.0
4 TraesCS3A01G149900 chr3D 93.162 468 20 2 581 1048 126237026 126236571 0.000000e+00 676.0
5 TraesCS3A01G149900 chr3D 92.070 227 8 6 25 244 126237244 126237021 1.030000e-80 311.0
6 TraesCS3A01G149900 chr3D 93.902 164 8 1 1662 1823 126235701 126235538 2.930000e-61 246.0
7 TraesCS3A01G149900 chr3D 90.909 99 7 2 3429 3527 126232665 126232569 8.570000e-27 132.0
8 TraesCS3A01G149900 chr3B 95.212 1107 41 8 1933 3034 180451974 180450875 0.000000e+00 1740.0
9 TraesCS3A01G149900 chr3B 92.947 1035 41 19 578 1599 180453650 180452635 0.000000e+00 1478.0
10 TraesCS3A01G149900 chr3B 93.651 441 18 4 3036 3472 180450828 180450394 0.000000e+00 651.0
11 TraesCS3A01G149900 chr3B 88.235 102 2 2 153 244 180453743 180453642 3.100000e-21 113.0
12 TraesCS3A01G149900 chr3B 92.537 67 5 0 3455 3521 180450367 180450301 3.130000e-16 97.1
13 TraesCS3A01G149900 chr3B 97.917 48 1 0 1662 1709 180452490 180452443 2.430000e-12 84.2
14 TraesCS3A01G149900 chr3B 89.362 47 1 4 3594 3638 448580067 448580111 5.310000e-04 56.5
15 TraesCS3A01G149900 chr1A 92.899 338 19 2 245 577 435765750 435765413 1.590000e-133 486.0
16 TraesCS3A01G149900 chr1A 94.872 117 6 0 3686 3802 418220936 418221052 2.330000e-42 183.0
17 TraesCS3A01G149900 chr1A 86.154 65 8 1 3594 3657 484294248 484294312 6.810000e-08 69.4
18 TraesCS3A01G149900 chr2B 92.420 343 20 3 245 581 2458671 2459013 5.710000e-133 484.0
19 TraesCS3A01G149900 chr7B 92.330 339 19 4 245 577 711845845 711845508 3.440000e-130 475.0
20 TraesCS3A01G149900 chr7B 92.012 338 22 2 245 577 98752148 98752485 1.600000e-128 470.0
21 TraesCS3A01G149900 chr7B 92.035 339 20 4 245 577 711880199 711879862 1.600000e-128 470.0
22 TraesCS3A01G149900 chr7B 91.740 339 21 4 245 577 711813028 711812691 7.440000e-127 464.0
23 TraesCS3A01G149900 chr7B 87.692 65 7 1 3594 3657 648096449 648096513 1.460000e-09 75.0
24 TraesCS3A01G149900 chr7B 93.750 48 3 0 3594 3641 526853967 526853920 5.270000e-09 73.1
25 TraesCS3A01G149900 chr7B 93.617 47 3 0 3594 3640 178391876 178391830 1.890000e-08 71.3
26 TraesCS3A01G149900 chr1B 91.789 341 23 2 245 580 85399323 85399663 1.600000e-128 470.0
27 TraesCS3A01G149900 chr5B 91.471 340 24 2 243 577 109115281 109114942 2.680000e-126 462.0
28 TraesCS3A01G149900 chr5B 91.304 46 4 0 3594 3639 58399765 58399810 3.170000e-06 63.9
29 TraesCS3A01G149900 chr5B 91.304 46 4 0 3594 3639 649005795 649005840 3.170000e-06 63.9
30 TraesCS3A01G149900 chr2A 91.202 341 25 2 245 580 478910495 478910155 3.460000e-125 459.0
31 TraesCS3A01G149900 chr2A 90.226 133 12 1 3671 3802 291782651 291782519 5.050000e-39 172.0
32 TraesCS3A01G149900 chr7A 94.915 118 6 0 3685 3802 509731141 509731258 6.490000e-43 185.0
33 TraesCS3A01G149900 chr7A 91.111 45 4 0 3594 3638 79818389 79818433 1.140000e-05 62.1
34 TraesCS3A01G149900 chr2D 94.915 118 6 0 3685 3802 598652397 598652514 6.490000e-43 185.0
35 TraesCS3A01G149900 chr2D 93.443 122 8 0 3681 3802 538596247 538596126 8.390000e-42 182.0
36 TraesCS3A01G149900 chr6B 94.167 120 6 1 3683 3801 5039500 5039619 8.390000e-42 182.0
37 TraesCS3A01G149900 chr6B 91.538 130 9 2 3674 3802 7402763 7402635 1.090000e-40 178.0
38 TraesCS3A01G149900 chr6A 93.443 122 8 0 3681 3802 158063315 158063194 8.390000e-42 182.0
39 TraesCS3A01G149900 chr7D 89.362 47 3 2 3594 3638 75890683 75890729 1.480000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G149900 chr3A 136427105 136430906 3801 True 7022.000000 7022 100.0000 1 3802 1 chr3A.!!$R1 3801
1 TraesCS3A01G149900 chr3D 126232569 126237244 4675 True 731.833333 2281 92.6445 25 3527 6 chr3D.!!$R1 3502
2 TraesCS3A01G149900 chr3B 180450301 180453743 3442 True 693.883333 1740 93.4165 153 3521 6 chr3B.!!$R1 3368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 402 0.034198 TTACAGTTAGGCGCTGCACA 59.966 50.0 7.64 0.0 37.47 4.57 F
886 899 0.034476 GTCCGTTTTCCTCGGTTCCT 59.966 55.0 4.36 0.0 46.86 3.36 F
1625 1855 0.390124 AGGACGGCGTCACTTTACAA 59.610 50.0 37.13 0.0 33.68 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1829 2115 0.038166 AGGCAGCATCTTCCCGAAAA 59.962 50.0 0.00 0.0 0.00 2.29 R
1833 2119 0.107703 TGTTAGGCAGCATCTTCCCG 60.108 55.0 0.00 0.0 0.00 5.14 R
3574 5599 0.109272 TCAGCGTCCACGAACTGATC 60.109 55.0 2.58 0.0 43.02 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.398318 AACCCAAGACCCTTCTTTGTT 57.602 42.857 0.00 0.00 40.34 2.83
21 22 4.529716 AACCCAAGACCCTTCTTTGTTA 57.470 40.909 0.00 0.00 40.34 2.41
22 23 4.741928 ACCCAAGACCCTTCTTTGTTAT 57.258 40.909 0.00 0.00 40.34 1.89
23 24 5.074746 ACCCAAGACCCTTCTTTGTTATT 57.925 39.130 0.00 0.00 40.34 1.40
24 25 5.464069 ACCCAAGACCCTTCTTTGTTATTT 58.536 37.500 0.00 0.00 40.34 1.40
25 26 6.616577 ACCCAAGACCCTTCTTTGTTATTTA 58.383 36.000 0.00 0.00 40.34 1.40
26 27 7.070629 ACCCAAGACCCTTCTTTGTTATTTAA 58.929 34.615 0.00 0.00 40.34 1.52
27 28 7.733047 ACCCAAGACCCTTCTTTGTTATTTAAT 59.267 33.333 0.00 0.00 40.34 1.40
28 29 8.034804 CCCAAGACCCTTCTTTGTTATTTAATG 58.965 37.037 0.00 0.00 40.34 1.90
29 30 8.585018 CCAAGACCCTTCTTTGTTATTTAATGT 58.415 33.333 0.00 0.00 40.34 2.71
30 31 9.981114 CAAGACCCTTCTTTGTTATTTAATGTT 57.019 29.630 0.00 0.00 40.34 2.71
31 32 9.981114 AAGACCCTTCTTTGTTATTTAATGTTG 57.019 29.630 0.00 0.00 39.17 3.33
32 33 9.143155 AGACCCTTCTTTGTTATTTAATGTTGT 57.857 29.630 0.00 0.00 0.00 3.32
108 111 7.444558 TTTTTGTTGTGCTTTAGTTCGAATC 57.555 32.000 0.00 0.00 0.00 2.52
114 117 5.000591 TGTGCTTTAGTTCGAATCATGGAA 58.999 37.500 0.00 0.00 0.00 3.53
123 126 2.159099 TCGAATCATGGAACGAAGGGAG 60.159 50.000 0.00 0.00 0.00 4.30
127 130 3.095912 TCATGGAACGAAGGGAGTAGA 57.904 47.619 0.00 0.00 0.00 2.59
128 131 3.437213 TCATGGAACGAAGGGAGTAGAA 58.563 45.455 0.00 0.00 0.00 2.10
129 132 4.030913 TCATGGAACGAAGGGAGTAGAAT 58.969 43.478 0.00 0.00 0.00 2.40
130 133 3.887621 TGGAACGAAGGGAGTAGAATG 57.112 47.619 0.00 0.00 0.00 2.67
131 134 3.437213 TGGAACGAAGGGAGTAGAATGA 58.563 45.455 0.00 0.00 0.00 2.57
165 168 2.287009 GCTACATTCTAAATGGGCGTGC 60.287 50.000 4.82 0.00 0.00 5.34
198 206 0.746563 CATGGGGCAAATACGACGGT 60.747 55.000 0.00 0.00 0.00 4.83
199 207 0.034863 ATGGGGCAAATACGACGGTT 60.035 50.000 0.00 0.00 0.00 4.44
242 255 3.010420 GCAAATACTCCACTCCACTTCC 58.990 50.000 0.00 0.00 0.00 3.46
243 256 3.559171 GCAAATACTCCACTCCACTTCCA 60.559 47.826 0.00 0.00 0.00 3.53
244 257 4.256920 CAAATACTCCACTCCACTTCCAG 58.743 47.826 0.00 0.00 0.00 3.86
245 258 1.938585 TACTCCACTCCACTTCCAGG 58.061 55.000 0.00 0.00 0.00 4.45
246 259 1.298014 CTCCACTCCACTTCCAGGC 59.702 63.158 0.00 0.00 0.00 4.85
247 260 1.461268 TCCACTCCACTTCCAGGCA 60.461 57.895 0.00 0.00 0.00 4.75
248 261 1.002868 CCACTCCACTTCCAGGCAG 60.003 63.158 0.00 0.00 0.00 4.85
249 262 1.483595 CCACTCCACTTCCAGGCAGA 61.484 60.000 0.00 0.00 0.00 4.26
250 263 0.397941 CACTCCACTTCCAGGCAGAA 59.602 55.000 0.00 0.00 0.00 3.02
251 264 1.004044 CACTCCACTTCCAGGCAGAAT 59.996 52.381 0.00 0.00 0.00 2.40
252 265 1.707427 ACTCCACTTCCAGGCAGAATT 59.293 47.619 0.00 0.00 0.00 2.17
253 266 2.089980 CTCCACTTCCAGGCAGAATTG 58.910 52.381 0.00 0.00 0.00 2.32
254 267 1.704628 TCCACTTCCAGGCAGAATTGA 59.295 47.619 8.55 0.00 30.24 2.57
255 268 1.815003 CCACTTCCAGGCAGAATTGAC 59.185 52.381 8.55 0.00 30.24 3.18
256 269 2.507484 CACTTCCAGGCAGAATTGACA 58.493 47.619 0.00 0.00 33.45 3.58
257 270 2.886523 CACTTCCAGGCAGAATTGACAA 59.113 45.455 0.00 0.00 33.45 3.18
258 271 3.318839 CACTTCCAGGCAGAATTGACAAA 59.681 43.478 0.00 0.00 33.45 2.83
259 272 4.021719 CACTTCCAGGCAGAATTGACAAAT 60.022 41.667 0.00 0.00 33.45 2.32
260 273 4.590222 ACTTCCAGGCAGAATTGACAAATT 59.410 37.500 0.00 0.00 38.74 1.82
261 274 5.070847 ACTTCCAGGCAGAATTGACAAATTT 59.929 36.000 0.00 0.00 36.10 1.82
262 275 4.885413 TCCAGGCAGAATTGACAAATTTG 58.115 39.130 16.67 16.67 36.10 2.32
263 276 4.588106 TCCAGGCAGAATTGACAAATTTGA 59.412 37.500 24.64 2.69 36.10 2.69
264 277 4.687483 CCAGGCAGAATTGACAAATTTGAC 59.313 41.667 24.64 18.43 36.10 3.18
265 278 4.687483 CAGGCAGAATTGACAAATTTGACC 59.313 41.667 24.64 15.06 36.10 4.02
266 279 4.590222 AGGCAGAATTGACAAATTTGACCT 59.410 37.500 24.64 12.15 36.10 3.85
267 280 5.070847 AGGCAGAATTGACAAATTTGACCTT 59.929 36.000 24.64 13.72 36.10 3.50
268 281 5.178067 GGCAGAATTGACAAATTTGACCTTG 59.822 40.000 24.64 12.83 36.10 3.61
269 282 5.984926 GCAGAATTGACAAATTTGACCTTGA 59.015 36.000 24.64 5.56 36.10 3.02
270 283 6.479660 GCAGAATTGACAAATTTGACCTTGAA 59.520 34.615 24.64 9.04 36.10 2.69
271 284 7.306983 GCAGAATTGACAAATTTGACCTTGAAG 60.307 37.037 24.64 9.45 36.10 3.02
272 285 7.707893 CAGAATTGACAAATTTGACCTTGAAGT 59.292 33.333 24.64 7.96 36.10 3.01
273 286 7.707893 AGAATTGACAAATTTGACCTTGAAGTG 59.292 33.333 24.64 0.00 36.10 3.16
274 287 6.522625 TTGACAAATTTGACCTTGAAGTGA 57.477 33.333 24.64 0.00 0.00 3.41
275 288 6.522625 TGACAAATTTGACCTTGAAGTGAA 57.477 33.333 24.64 0.00 0.00 3.18
276 289 6.929625 TGACAAATTTGACCTTGAAGTGAAA 58.070 32.000 24.64 0.00 0.00 2.69
277 290 7.035004 TGACAAATTTGACCTTGAAGTGAAAG 58.965 34.615 24.64 0.00 0.00 2.62
278 291 6.935167 ACAAATTTGACCTTGAAGTGAAAGT 58.065 32.000 24.64 0.00 0.00 2.66
279 292 8.062065 ACAAATTTGACCTTGAAGTGAAAGTA 57.938 30.769 24.64 0.00 0.00 2.24
280 293 8.695456 ACAAATTTGACCTTGAAGTGAAAGTAT 58.305 29.630 24.64 0.00 0.00 2.12
281 294 9.533253 CAAATTTGACCTTGAAGTGAAAGTATT 57.467 29.630 13.08 0.00 0.00 1.89
328 341 9.584839 GAAAATATTTCACATCACTTTTTGTGC 57.415 29.630 0.10 0.00 45.81 4.57
329 342 8.659925 AAATATTTCACATCACTTTTTGTGCA 57.340 26.923 0.00 0.00 45.81 4.57
330 343 7.878477 ATATTTCACATCACTTTTTGTGCAG 57.122 32.000 0.00 0.00 45.81 4.41
331 344 3.082698 TCACATCACTTTTTGTGCAGC 57.917 42.857 0.00 0.00 45.81 5.25
332 345 2.689471 TCACATCACTTTTTGTGCAGCT 59.311 40.909 0.00 0.00 45.81 4.24
333 346 3.047796 CACATCACTTTTTGTGCAGCTC 58.952 45.455 0.00 0.00 45.81 4.09
334 347 2.035066 ACATCACTTTTTGTGCAGCTCC 59.965 45.455 0.00 0.00 45.81 4.70
335 348 1.032014 TCACTTTTTGTGCAGCTCCC 58.968 50.000 0.00 0.00 45.81 4.30
336 349 0.746063 CACTTTTTGTGCAGCTCCCA 59.254 50.000 0.00 0.00 40.06 4.37
337 350 1.136695 CACTTTTTGTGCAGCTCCCAA 59.863 47.619 0.00 0.00 40.06 4.12
338 351 1.136891 ACTTTTTGTGCAGCTCCCAAC 59.863 47.619 0.00 0.00 0.00 3.77
339 352 1.136695 CTTTTTGTGCAGCTCCCAACA 59.863 47.619 0.00 0.00 0.00 3.33
340 353 0.746063 TTTTGTGCAGCTCCCAACAG 59.254 50.000 0.00 0.00 0.00 3.16
341 354 0.395586 TTTGTGCAGCTCCCAACAGT 60.396 50.000 0.00 0.00 0.00 3.55
342 355 0.472044 TTGTGCAGCTCCCAACAGTA 59.528 50.000 0.00 0.00 0.00 2.74
343 356 0.472044 TGTGCAGCTCCCAACAGTAA 59.528 50.000 0.00 0.00 0.00 2.24
344 357 1.160137 GTGCAGCTCCCAACAGTAAG 58.840 55.000 0.00 0.00 0.00 2.34
345 358 0.036732 TGCAGCTCCCAACAGTAAGG 59.963 55.000 0.00 0.00 0.00 2.69
346 359 1.308783 GCAGCTCCCAACAGTAAGGC 61.309 60.000 0.00 0.00 0.00 4.35
347 360 1.021390 CAGCTCCCAACAGTAAGGCG 61.021 60.000 0.00 0.00 0.00 5.52
348 361 2.399356 GCTCCCAACAGTAAGGCGC 61.399 63.158 0.00 0.00 0.00 6.53
349 362 1.296715 CTCCCAACAGTAAGGCGCT 59.703 57.895 7.64 0.00 0.00 5.92
350 363 1.003839 TCCCAACAGTAAGGCGCTG 60.004 57.895 7.64 0.00 39.67 5.18
351 364 2.690778 CCCAACAGTAAGGCGCTGC 61.691 63.158 7.64 0.00 37.47 5.25
352 365 1.965930 CCAACAGTAAGGCGCTGCA 60.966 57.895 7.64 0.00 37.47 4.41
353 366 1.207593 CAACAGTAAGGCGCTGCAC 59.792 57.895 7.64 2.20 37.47 4.57
354 367 1.071471 AACAGTAAGGCGCTGCACT 59.929 52.632 7.64 4.83 37.47 4.40
355 368 0.951040 AACAGTAAGGCGCTGCACTC 60.951 55.000 7.64 0.00 37.47 3.51
356 369 1.079543 CAGTAAGGCGCTGCACTCT 60.080 57.895 7.64 0.00 0.00 3.24
357 370 0.173481 CAGTAAGGCGCTGCACTCTA 59.827 55.000 7.64 0.00 0.00 2.43
358 371 0.173708 AGTAAGGCGCTGCACTCTAC 59.826 55.000 7.64 2.12 0.00 2.59
359 372 0.173708 GTAAGGCGCTGCACTCTACT 59.826 55.000 7.64 0.00 0.00 2.57
360 373 0.173481 TAAGGCGCTGCACTCTACTG 59.827 55.000 7.64 0.00 0.00 2.74
361 374 1.821061 AAGGCGCTGCACTCTACTGT 61.821 55.000 7.64 0.00 0.00 3.55
362 375 2.097038 GGCGCTGCACTCTACTGTG 61.097 63.158 7.64 0.00 40.62 3.66
371 384 3.393089 CACTCTACTGTGCAACTCCTT 57.607 47.619 0.00 0.00 38.04 3.36
372 385 4.521130 CACTCTACTGTGCAACTCCTTA 57.479 45.455 0.00 0.00 38.04 2.69
373 386 4.238514 CACTCTACTGTGCAACTCCTTAC 58.761 47.826 0.00 0.00 38.04 2.34
374 387 3.895656 ACTCTACTGTGCAACTCCTTACA 59.104 43.478 0.00 0.00 38.04 2.41
375 388 4.021894 ACTCTACTGTGCAACTCCTTACAG 60.022 45.833 0.00 0.00 44.52 2.74
380 393 3.997021 CTGTGCAACTCCTTACAGTTAGG 59.003 47.826 0.00 0.00 34.70 2.69
381 394 2.742589 GTGCAACTCCTTACAGTTAGGC 59.257 50.000 0.18 0.00 34.70 3.93
382 395 2.000447 GCAACTCCTTACAGTTAGGCG 59.000 52.381 0.18 0.00 34.70 5.52
383 396 2.000447 CAACTCCTTACAGTTAGGCGC 59.000 52.381 0.00 0.00 34.70 6.53
384 397 1.558233 ACTCCTTACAGTTAGGCGCT 58.442 50.000 7.64 0.00 32.59 5.92
385 398 1.204941 ACTCCTTACAGTTAGGCGCTG 59.795 52.381 7.64 0.00 39.67 5.18
386 399 0.108329 TCCTTACAGTTAGGCGCTGC 60.108 55.000 7.64 0.00 37.47 5.25
387 400 0.391130 CCTTACAGTTAGGCGCTGCA 60.391 55.000 7.64 0.00 37.47 4.41
388 401 0.721718 CTTACAGTTAGGCGCTGCAC 59.278 55.000 7.64 0.76 37.47 4.57
389 402 0.034198 TTACAGTTAGGCGCTGCACA 59.966 50.000 7.64 0.00 37.47 4.57
390 403 0.389817 TACAGTTAGGCGCTGCACAG 60.390 55.000 7.64 0.64 37.47 3.66
391 404 1.669115 CAGTTAGGCGCTGCACAGT 60.669 57.895 7.64 0.00 0.00 3.55
392 405 1.669115 AGTTAGGCGCTGCACAGTG 60.669 57.895 7.64 6.84 41.63 3.66
393 406 1.961277 GTTAGGCGCTGCACAGTGT 60.961 57.895 7.64 0.00 40.84 3.55
394 407 0.669318 GTTAGGCGCTGCACAGTGTA 60.669 55.000 7.64 0.00 40.84 2.90
395 408 0.389817 TTAGGCGCTGCACAGTGTAG 60.390 55.000 14.02 14.02 40.84 2.74
396 409 1.532604 TAGGCGCTGCACAGTGTAGT 61.533 55.000 18.74 3.00 40.84 2.73
397 410 2.671177 GGCGCTGCACAGTGTAGTG 61.671 63.158 23.67 23.67 42.30 2.74
404 417 2.832931 CACAGTGTAGTGCAGCTCC 58.167 57.895 0.00 0.00 32.04 4.70
405 418 0.319728 CACAGTGTAGTGCAGCTCCT 59.680 55.000 0.00 0.00 32.04 3.69
406 419 1.051812 ACAGTGTAGTGCAGCTCCTT 58.948 50.000 0.00 0.00 0.00 3.36
407 420 2.029020 CACAGTGTAGTGCAGCTCCTTA 60.029 50.000 0.00 0.00 32.04 2.69
408 421 2.028930 ACAGTGTAGTGCAGCTCCTTAC 60.029 50.000 0.00 0.00 0.00 2.34
409 422 2.029020 CAGTGTAGTGCAGCTCCTTACA 60.029 50.000 0.00 0.00 0.00 2.41
410 423 2.232452 AGTGTAGTGCAGCTCCTTACAG 59.768 50.000 0.00 0.00 0.00 2.74
411 424 1.066858 TGTAGTGCAGCTCCTTACAGC 60.067 52.381 0.00 0.00 39.99 4.40
417 430 4.740235 GCTCCTTACAGCTAGGCG 57.260 61.111 0.00 0.00 36.38 5.52
418 431 1.817209 GCTCCTTACAGCTAGGCGT 59.183 57.895 0.00 0.00 36.38 5.68
419 432 0.175989 GCTCCTTACAGCTAGGCGTT 59.824 55.000 0.00 0.00 36.38 4.84
420 433 1.927895 CTCCTTACAGCTAGGCGTTG 58.072 55.000 0.00 0.00 32.59 4.10
421 434 0.108329 TCCTTACAGCTAGGCGTTGC 60.108 55.000 4.63 4.63 32.59 4.17
422 435 0.391130 CCTTACAGCTAGGCGTTGCA 60.391 55.000 14.88 0.00 0.00 4.08
423 436 0.721718 CTTACAGCTAGGCGTTGCAC 59.278 55.000 14.88 0.00 0.00 4.57
424 437 0.034198 TTACAGCTAGGCGTTGCACA 59.966 50.000 14.88 0.00 0.00 4.57
425 438 0.389817 TACAGCTAGGCGTTGCACAG 60.390 55.000 14.88 6.94 0.00 3.66
426 439 1.669115 CAGCTAGGCGTTGCACAGT 60.669 57.895 14.88 0.00 0.00 3.55
427 440 0.389817 CAGCTAGGCGTTGCACAGTA 60.390 55.000 14.88 0.00 0.00 2.74
428 441 0.537188 AGCTAGGCGTTGCACAGTAT 59.463 50.000 14.88 0.00 0.00 2.12
429 442 0.652592 GCTAGGCGTTGCACAGTATG 59.347 55.000 7.96 0.00 46.00 2.39
430 443 1.290203 CTAGGCGTTGCACAGTATGG 58.710 55.000 0.00 0.00 43.62 2.74
431 444 0.742990 TAGGCGTTGCACAGTATGGC 60.743 55.000 0.00 0.00 43.62 4.40
432 445 2.098298 GCGTTGCACAGTATGGCG 59.902 61.111 0.00 0.00 43.62 5.69
433 446 2.098298 CGTTGCACAGTATGGCGC 59.902 61.111 0.00 0.00 43.62 6.53
434 447 2.676029 CGTTGCACAGTATGGCGCA 61.676 57.895 10.83 0.00 45.09 6.09
435 448 1.802636 GTTGCACAGTATGGCGCAT 59.197 52.632 10.83 3.40 45.84 4.73
436 449 0.523968 GTTGCACAGTATGGCGCATG 60.524 55.000 10.83 1.70 45.84 4.06
437 450 0.959867 TTGCACAGTATGGCGCATGT 60.960 50.000 10.83 2.41 45.84 3.21
438 451 1.063006 GCACAGTATGGCGCATGTG 59.937 57.895 10.83 15.99 43.62 3.21
439 452 1.723273 CACAGTATGGCGCATGTGG 59.277 57.895 10.83 0.00 43.62 4.17
440 453 1.451927 ACAGTATGGCGCATGTGGG 60.452 57.895 10.83 0.00 43.62 4.61
441 454 1.451927 CAGTATGGCGCATGTGGGT 60.452 57.895 10.83 0.00 0.00 4.51
442 455 1.031571 CAGTATGGCGCATGTGGGTT 61.032 55.000 10.83 0.00 0.00 4.11
443 456 0.544223 AGTATGGCGCATGTGGGTTA 59.456 50.000 10.83 0.00 0.00 2.85
444 457 0.944386 GTATGGCGCATGTGGGTTAG 59.056 55.000 10.83 0.00 0.00 2.34
445 458 0.179032 TATGGCGCATGTGGGTTAGG 60.179 55.000 10.83 0.00 0.00 2.69
446 459 3.518068 GGCGCATGTGGGTTAGGC 61.518 66.667 10.83 0.00 0.00 3.93
448 461 3.876198 CGCATGTGGGTTAGGCGC 61.876 66.667 0.00 0.00 41.27 6.53
449 462 2.438434 GCATGTGGGTTAGGCGCT 60.438 61.111 7.64 0.00 0.00 5.92
450 463 2.764314 GCATGTGGGTTAGGCGCTG 61.764 63.158 7.64 0.00 0.00 5.18
451 464 2.438434 ATGTGGGTTAGGCGCTGC 60.438 61.111 7.64 0.00 0.00 5.25
452 465 3.266686 ATGTGGGTTAGGCGCTGCA 62.267 57.895 7.64 0.00 0.00 4.41
453 466 3.431725 GTGGGTTAGGCGCTGCAC 61.432 66.667 7.64 0.55 0.00 4.57
467 480 3.909019 GCTGCACGATAAGAGTGTAAC 57.091 47.619 0.00 0.00 41.36 2.50
468 481 2.279136 GCTGCACGATAAGAGTGTAACG 59.721 50.000 0.00 0.00 45.86 3.18
469 482 2.256174 TGCACGATAAGAGTGTAACGC 58.744 47.619 0.00 0.00 45.86 4.84
479 492 2.639751 GAGTGTAACGCTTTGCTGTTG 58.360 47.619 8.93 0.00 45.86 3.33
480 493 1.333619 AGTGTAACGCTTTGCTGTTGG 59.666 47.619 8.93 0.00 45.86 3.77
481 494 0.665835 TGTAACGCTTTGCTGTTGGG 59.334 50.000 8.93 0.00 30.97 4.12
482 495 0.663269 GTAACGCTTTGCTGTTGGGC 60.663 55.000 8.93 0.00 30.97 5.36
485 498 3.982241 GCTTTGCTGTTGGGCGCT 61.982 61.111 7.64 0.00 34.52 5.92
486 499 2.049802 CTTTGCTGTTGGGCGCTG 60.050 61.111 7.64 0.00 34.52 5.18
487 500 4.283403 TTTGCTGTTGGGCGCTGC 62.283 61.111 7.64 3.29 34.52 5.25
491 504 3.367743 CTGTTGGGCGCTGCACAT 61.368 61.111 7.64 0.00 43.39 3.21
492 505 2.911509 TGTTGGGCGCTGCACATT 60.912 55.556 7.64 0.00 43.39 2.71
493 506 1.585267 CTGTTGGGCGCTGCACATTA 61.585 55.000 7.64 0.00 43.39 1.90
494 507 1.137404 GTTGGGCGCTGCACATTAG 59.863 57.895 7.64 0.00 43.39 1.73
495 508 1.002746 TTGGGCGCTGCACATTAGA 60.003 52.632 7.64 0.00 43.39 2.10
496 509 1.026182 TTGGGCGCTGCACATTAGAG 61.026 55.000 7.64 0.00 43.39 2.43
497 510 2.182842 GGGCGCTGCACATTAGAGG 61.183 63.158 7.64 0.00 0.00 3.69
498 511 1.450312 GGCGCTGCACATTAGAGGT 60.450 57.895 7.64 0.00 0.00 3.85
499 512 1.432270 GGCGCTGCACATTAGAGGTC 61.432 60.000 7.64 0.00 0.00 3.85
500 513 0.740868 GCGCTGCACATTAGAGGTCA 60.741 55.000 0.00 0.00 0.00 4.02
501 514 1.284657 CGCTGCACATTAGAGGTCAG 58.715 55.000 0.00 0.00 0.00 3.51
502 515 1.012841 GCTGCACATTAGAGGTCAGC 58.987 55.000 0.00 0.00 39.82 4.26
503 516 1.406614 GCTGCACATTAGAGGTCAGCT 60.407 52.381 4.95 0.00 42.41 4.24
504 517 2.277969 CTGCACATTAGAGGTCAGCTG 58.722 52.381 7.63 7.63 0.00 4.24
505 518 1.065926 TGCACATTAGAGGTCAGCTGG 60.066 52.381 15.13 0.00 0.00 4.85
506 519 1.208052 GCACATTAGAGGTCAGCTGGA 59.792 52.381 15.13 0.00 0.00 3.86
507 520 2.158842 GCACATTAGAGGTCAGCTGGAT 60.159 50.000 15.13 0.00 0.00 3.41
508 521 3.464907 CACATTAGAGGTCAGCTGGATG 58.535 50.000 15.13 9.23 0.00 3.51
509 522 3.133542 CACATTAGAGGTCAGCTGGATGA 59.866 47.826 15.13 0.00 0.00 2.92
510 523 3.776969 ACATTAGAGGTCAGCTGGATGAA 59.223 43.478 15.13 1.63 0.00 2.57
511 524 4.225942 ACATTAGAGGTCAGCTGGATGAAA 59.774 41.667 15.13 2.44 0.00 2.69
512 525 5.104193 ACATTAGAGGTCAGCTGGATGAAAT 60.104 40.000 15.13 4.74 0.00 2.17
513 526 6.100279 ACATTAGAGGTCAGCTGGATGAAATA 59.900 38.462 15.13 0.00 0.00 1.40
514 527 4.414337 AGAGGTCAGCTGGATGAAATAC 57.586 45.455 15.13 1.25 0.00 1.89
515 528 4.036518 AGAGGTCAGCTGGATGAAATACT 58.963 43.478 15.13 0.00 0.00 2.12
516 529 4.472833 AGAGGTCAGCTGGATGAAATACTT 59.527 41.667 15.13 0.00 0.00 2.24
517 530 5.045286 AGAGGTCAGCTGGATGAAATACTTT 60.045 40.000 15.13 0.00 0.00 2.66
518 531 5.189180 AGGTCAGCTGGATGAAATACTTTC 58.811 41.667 15.13 0.00 40.08 2.62
551 564 8.340443 AGTTTAGTTTGTGAAATAGTTTCGTCC 58.660 33.333 0.00 0.00 42.55 4.79
552 565 8.340443 GTTTAGTTTGTGAAATAGTTTCGTCCT 58.660 33.333 0.00 0.00 42.55 3.85
553 566 6.300354 AGTTTGTGAAATAGTTTCGTCCTG 57.700 37.500 0.00 0.00 42.55 3.86
554 567 6.053005 AGTTTGTGAAATAGTTTCGTCCTGA 58.947 36.000 0.00 0.00 42.55 3.86
555 568 6.540914 AGTTTGTGAAATAGTTTCGTCCTGAA 59.459 34.615 0.00 0.00 42.55 3.02
556 569 6.539649 TTGTGAAATAGTTTCGTCCTGAAG 57.460 37.500 0.00 0.00 42.55 3.02
557 570 5.607477 TGTGAAATAGTTTCGTCCTGAAGT 58.393 37.500 0.00 0.00 42.55 3.01
558 571 5.694910 TGTGAAATAGTTTCGTCCTGAAGTC 59.305 40.000 0.00 0.00 42.55 3.01
559 572 5.694910 GTGAAATAGTTTCGTCCTGAAGTCA 59.305 40.000 0.00 0.00 42.55 3.41
560 573 6.202188 GTGAAATAGTTTCGTCCTGAAGTCAA 59.798 38.462 0.00 0.00 42.55 3.18
561 574 6.764085 TGAAATAGTTTCGTCCTGAAGTCAAA 59.236 34.615 0.00 0.00 42.55 2.69
562 575 7.444183 TGAAATAGTTTCGTCCTGAAGTCAAAT 59.556 33.333 0.00 0.00 42.55 2.32
563 576 7.745620 AATAGTTTCGTCCTGAAGTCAAATT 57.254 32.000 0.00 0.00 37.99 1.82
564 577 7.745620 ATAGTTTCGTCCTGAAGTCAAATTT 57.254 32.000 0.00 0.00 37.99 1.82
565 578 8.842358 ATAGTTTCGTCCTGAAGTCAAATTTA 57.158 30.769 0.00 0.00 37.99 1.40
566 579 7.745620 AGTTTCGTCCTGAAGTCAAATTTAT 57.254 32.000 0.00 0.00 37.99 1.40
567 580 7.584987 AGTTTCGTCCTGAAGTCAAATTTATG 58.415 34.615 0.00 0.00 37.99 1.90
568 581 7.228706 AGTTTCGTCCTGAAGTCAAATTTATGT 59.771 33.333 0.00 0.00 37.99 2.29
569 582 7.504924 TTCGTCCTGAAGTCAAATTTATGTT 57.495 32.000 0.00 0.00 31.44 2.71
570 583 7.504924 TCGTCCTGAAGTCAAATTTATGTTT 57.495 32.000 0.00 0.00 0.00 2.83
571 584 7.936584 TCGTCCTGAAGTCAAATTTATGTTTT 58.063 30.769 0.00 0.00 0.00 2.43
572 585 8.410141 TCGTCCTGAAGTCAAATTTATGTTTTT 58.590 29.630 0.00 0.00 0.00 1.94
599 612 3.244422 CCACTTCCACTACACTAGGCAAA 60.244 47.826 0.00 0.00 0.00 3.68
600 613 3.997021 CACTTCCACTACACTAGGCAAAG 59.003 47.826 0.00 0.00 0.00 2.77
601 614 2.762535 TCCACTACACTAGGCAAAGC 57.237 50.000 0.00 0.00 0.00 3.51
603 616 2.571653 TCCACTACACTAGGCAAAGCAT 59.428 45.455 0.00 0.00 0.00 3.79
672 685 1.959226 GAGCGCTTGTCCGTTTCCA 60.959 57.895 13.26 0.00 0.00 3.53
674 687 1.154225 GCGCTTGTCCGTTTCCATG 60.154 57.895 0.00 0.00 0.00 3.66
729 742 1.749334 GCCATCCCTCTCCCAGTACG 61.749 65.000 0.00 0.00 0.00 3.67
757 770 3.823873 TCACTTCTCTTCTCGCTCTTCTT 59.176 43.478 0.00 0.00 0.00 2.52
758 771 4.083003 TCACTTCTCTTCTCGCTCTTCTTC 60.083 45.833 0.00 0.00 0.00 2.87
759 772 4.079253 ACTTCTCTTCTCGCTCTTCTTCT 58.921 43.478 0.00 0.00 0.00 2.85
760 773 4.522789 ACTTCTCTTCTCGCTCTTCTTCTT 59.477 41.667 0.00 0.00 0.00 2.52
761 774 4.695217 TCTCTTCTCGCTCTTCTTCTTC 57.305 45.455 0.00 0.00 0.00 2.87
762 775 4.331968 TCTCTTCTCGCTCTTCTTCTTCT 58.668 43.478 0.00 0.00 0.00 2.85
886 899 0.034476 GTCCGTTTTCCTCGGTTCCT 59.966 55.000 4.36 0.00 46.86 3.36
899 912 2.364317 TTCCTCCCCTGCTCTCCG 60.364 66.667 0.00 0.00 0.00 4.63
901 914 2.364317 CCTCCCCTGCTCTCCGAA 60.364 66.667 0.00 0.00 0.00 4.30
933 946 2.431057 GGATAGAGAGTCCTTTTCCGCA 59.569 50.000 0.00 0.00 32.85 5.69
1021 1034 4.576053 CGGTATATACGATCCGGTCCATTA 59.424 45.833 0.00 0.00 39.41 1.90
1175 1363 2.819595 CATGAGTTCGTGGCGGGG 60.820 66.667 0.00 0.00 0.00 5.73
1404 1592 2.596851 GCCTTCCAGGTGAGCCAGA 61.597 63.158 0.00 0.00 37.80 3.86
1482 1674 2.688507 TGAGATCGTGAGTTCTTTGGC 58.311 47.619 0.00 0.00 40.09 4.52
1502 1694 2.296190 GCCACGTCTTCCTTTTTCCAAT 59.704 45.455 0.00 0.00 0.00 3.16
1503 1695 3.243737 GCCACGTCTTCCTTTTTCCAATT 60.244 43.478 0.00 0.00 0.00 2.32
1504 1696 4.022676 GCCACGTCTTCCTTTTTCCAATTA 60.023 41.667 0.00 0.00 0.00 1.40
1506 1698 6.127842 GCCACGTCTTCCTTTTTCCAATTATA 60.128 38.462 0.00 0.00 0.00 0.98
1507 1699 7.576098 GCCACGTCTTCCTTTTTCCAATTATAA 60.576 37.037 0.00 0.00 0.00 0.98
1508 1700 8.301002 CCACGTCTTCCTTTTTCCAATTATAAA 58.699 33.333 0.00 0.00 0.00 1.40
1509 1701 9.341899 CACGTCTTCCTTTTTCCAATTATAAAG 57.658 33.333 0.00 0.00 0.00 1.85
1510 1702 9.074576 ACGTCTTCCTTTTTCCAATTATAAAGT 57.925 29.630 0.00 0.00 0.00 2.66
1511 1703 9.908152 CGTCTTCCTTTTTCCAATTATAAAGTT 57.092 29.630 0.00 0.00 0.00 2.66
1532 1724 4.330740 TTGCTTTAGGTATCGTTTTCGC 57.669 40.909 0.00 0.00 43.73 4.70
1564 1765 5.398176 TTGTTCAAACAGATACACGACAC 57.602 39.130 0.00 0.00 40.50 3.67
1568 1769 4.361420 TCAAACAGATACACGACACGAAA 58.639 39.130 0.00 0.00 0.00 3.46
1595 1796 8.277490 TCTATGACACGACTAAGTAAATGAGT 57.723 34.615 0.00 0.00 0.00 3.41
1599 1800 6.805271 TGACACGACTAAGTAAATGAGTTAGC 59.195 38.462 0.00 0.00 42.68 3.09
1600 1801 6.098017 ACACGACTAAGTAAATGAGTTAGCC 58.902 40.000 0.00 0.00 42.68 3.93
1601 1802 6.097356 CACGACTAAGTAAATGAGTTAGCCA 58.903 40.000 0.00 0.00 42.68 4.75
1604 1805 7.277981 ACGACTAAGTAAATGAGTTAGCCATTG 59.722 37.037 0.00 0.00 42.68 2.82
1624 1854 1.068333 GTAGGACGGCGTCACTTTACA 60.068 52.381 37.13 16.14 33.68 2.41
1625 1855 0.390124 AGGACGGCGTCACTTTACAA 59.610 50.000 37.13 0.00 33.68 2.41
1626 1856 1.202557 AGGACGGCGTCACTTTACAAA 60.203 47.619 37.13 0.00 33.68 2.83
1627 1857 1.598601 GGACGGCGTCACTTTACAAAA 59.401 47.619 37.13 0.00 33.68 2.44
1628 1858 2.031930 GGACGGCGTCACTTTACAAAAA 59.968 45.455 37.13 0.00 33.68 1.94
1731 2015 2.620251 TCTGGTCTGTGAAGTTGTGG 57.380 50.000 0.00 0.00 0.00 4.17
1763 2047 1.464219 TGCTGTAACGTACGACGATGA 59.536 47.619 24.41 0.00 46.05 2.92
1767 2051 3.225548 TGTAACGTACGACGATGAACAC 58.774 45.455 24.41 6.19 46.05 3.32
1801 2087 1.348594 GTGATTAGGCTTGCGTCGC 59.651 57.895 11.10 11.10 0.00 5.19
1813 2099 2.312061 CGTCGCAACGTACGATGC 59.688 61.111 32.89 32.89 43.94 3.91
1814 2100 2.150218 CGTCGCAACGTACGATGCT 61.150 57.895 36.54 9.48 43.94 3.79
1815 2101 1.340465 GTCGCAACGTACGATGCTG 59.660 57.895 36.54 30.22 42.26 4.41
1816 2102 2.020016 CGCAACGTACGATGCTGC 59.980 61.111 36.54 27.35 40.95 5.25
1817 2103 2.725699 CGCAACGTACGATGCTGCA 61.726 57.895 36.54 4.13 40.95 4.41
1818 2104 1.715585 GCAACGTACGATGCTGCAT 59.284 52.632 34.51 16.20 40.15 3.96
1819 2105 0.927537 GCAACGTACGATGCTGCATA 59.072 50.000 34.51 0.00 40.15 3.14
1820 2106 1.326245 GCAACGTACGATGCTGCATAA 59.674 47.619 34.51 1.26 40.15 1.90
1821 2107 2.845764 GCAACGTACGATGCTGCATAAC 60.846 50.000 34.51 12.74 40.15 1.89
1822 2108 2.287393 ACGTACGATGCTGCATAACA 57.713 45.000 24.41 0.09 0.00 2.41
1823 2109 2.612604 ACGTACGATGCTGCATAACAA 58.387 42.857 24.41 0.00 0.00 2.83
1824 2110 3.194861 ACGTACGATGCTGCATAACAAT 58.805 40.909 24.41 2.24 0.00 2.71
1825 2111 3.621268 ACGTACGATGCTGCATAACAATT 59.379 39.130 24.41 0.00 0.00 2.32
1826 2112 4.094294 ACGTACGATGCTGCATAACAATTT 59.906 37.500 24.41 0.00 0.00 1.82
1827 2113 5.027737 CGTACGATGCTGCATAACAATTTT 58.972 37.500 16.23 0.00 0.00 1.82
1828 2114 5.511377 CGTACGATGCTGCATAACAATTTTT 59.489 36.000 16.23 0.00 0.00 1.94
1882 2201 1.081094 GGCCAATGACATTTGCAAGC 58.919 50.000 21.78 9.86 32.98 4.01
1922 2529 0.454957 GTGCCTGTGCTGTATTTGCG 60.455 55.000 0.00 0.00 38.71 4.85
1928 2535 3.000041 CTGTGCTGTATTTGCGGTAGAA 59.000 45.455 0.00 0.00 0.00 2.10
1929 2536 3.403968 TGTGCTGTATTTGCGGTAGAAA 58.596 40.909 0.00 0.00 0.00 2.52
1930 2537 3.815962 TGTGCTGTATTTGCGGTAGAAAA 59.184 39.130 0.00 0.00 0.00 2.29
1931 2538 4.156182 GTGCTGTATTTGCGGTAGAAAAC 58.844 43.478 0.00 0.00 0.00 2.43
1932 2539 4.069304 TGCTGTATTTGCGGTAGAAAACT 58.931 39.130 0.00 0.00 0.00 2.66
1933 2540 5.121142 GTGCTGTATTTGCGGTAGAAAACTA 59.879 40.000 0.00 0.00 0.00 2.24
1934 2541 5.350365 TGCTGTATTTGCGGTAGAAAACTAG 59.650 40.000 0.00 0.00 0.00 2.57
1935 2542 5.579511 GCTGTATTTGCGGTAGAAAACTAGA 59.420 40.000 0.00 0.00 0.00 2.43
1936 2543 6.091713 GCTGTATTTGCGGTAGAAAACTAGAA 59.908 38.462 0.00 0.00 0.00 2.10
1955 2562 7.675062 ACTAGAAATCATGTCAGAAACTGAGT 58.325 34.615 0.00 0.00 41.46 3.41
2046 2653 3.083997 ATGTCCACCTCCGAGCCC 61.084 66.667 0.00 0.00 0.00 5.19
2425 3032 1.658114 CTGGACGTGGTGAAGTCGA 59.342 57.895 0.00 0.00 38.20 4.20
2677 3284 0.666913 GTGCCATGATCACTGATGCC 59.333 55.000 0.00 0.00 0.00 4.40
2682 3289 2.956333 CCATGATCACTGATGCCAATGT 59.044 45.455 0.00 0.00 0.00 2.71
2777 3384 1.152649 ATCCATGGGACTGGGAATCC 58.847 55.000 13.02 0.00 36.89 3.01
2781 3388 0.620410 ATGGGACTGGGAATCCGTCA 60.620 55.000 9.07 0.00 37.89 4.35
2804 3411 7.498900 GTCATGGAGATCATACCATTTACAACA 59.501 37.037 13.76 0.00 43.30 3.33
2858 3467 5.429957 AGTTGCTTCAGAATTCACAGAAC 57.570 39.130 8.44 3.08 0.00 3.01
2871 3480 5.738619 TTCACAGAACTTGGCACTATAGA 57.261 39.130 6.78 0.00 0.00 1.98
2936 3545 8.634444 GGGGAGATGCTATTACATGTATAGTAG 58.366 40.741 6.36 10.42 0.00 2.57
2937 3546 9.191479 GGGAGATGCTATTACATGTATAGTAGT 57.809 37.037 6.36 3.12 0.00 2.73
3031 3640 4.098044 TCTTGTCTGACGGGAGATAATGTC 59.902 45.833 2.98 0.00 0.00 3.06
3034 3689 2.362397 TCTGACGGGAGATAATGTCTGC 59.638 50.000 0.00 0.00 43.94 4.26
3053 3708 0.318022 CATGCTTTGCTCACGTTGCA 60.318 50.000 8.69 8.69 38.80 4.08
3071 3726 3.621225 TGGATGGCTCCAGAGTCG 58.379 61.111 2.10 0.00 46.95 4.18
3082 3737 2.234908 CTCCAGAGTCGTGAATTCCCTT 59.765 50.000 2.27 0.00 0.00 3.95
3163 3818 1.405105 TCAGTGGCAAGTTTTCACAGC 59.595 47.619 0.00 0.00 34.17 4.40
3181 3836 0.318699 GCAAGAGGGCAAAAACGGAC 60.319 55.000 0.00 0.00 0.00 4.79
3226 3883 4.096231 TGGACGATACAGAATTGCCATTTG 59.904 41.667 0.00 0.00 0.00 2.32
3280 3937 1.574428 GTGCGTTTACCACAGCCAG 59.426 57.895 0.00 0.00 33.50 4.85
3309 3966 2.412591 AGATTCCGATTCCAGATGGGT 58.587 47.619 0.00 0.00 38.11 4.51
3324 3981 1.522668 TGGGTTCACGCTGATTTGAG 58.477 50.000 0.00 0.00 0.00 3.02
3325 3982 1.202758 TGGGTTCACGCTGATTTGAGT 60.203 47.619 0.00 0.00 0.00 3.41
3368 4029 2.038975 TGGGAGAGGAGAACCCCG 59.961 66.667 0.00 0.00 42.65 5.73
3422 5401 4.080582 TCAAAAGTTGTGTGGAGAGGAAGA 60.081 41.667 0.00 0.00 0.00 2.87
3423 5402 3.760580 AAGTTGTGTGGAGAGGAAGAG 57.239 47.619 0.00 0.00 0.00 2.85
3424 5403 2.964209 AGTTGTGTGGAGAGGAAGAGA 58.036 47.619 0.00 0.00 0.00 3.10
3425 5404 2.630580 AGTTGTGTGGAGAGGAAGAGAC 59.369 50.000 0.00 0.00 0.00 3.36
3426 5405 2.365617 GTTGTGTGGAGAGGAAGAGACA 59.634 50.000 0.00 0.00 0.00 3.41
3429 5410 1.190643 GTGGAGAGGAAGAGACAGGG 58.809 60.000 0.00 0.00 0.00 4.45
3460 5441 4.355287 AGGAGAAAGGGGAATTCAGACTTT 59.645 41.667 16.30 16.30 34.38 2.66
3527 5552 2.047844 CGTGTGTGCCTCCTCCTG 60.048 66.667 0.00 0.00 0.00 3.86
3528 5553 2.359230 GTGTGTGCCTCCTCCTGC 60.359 66.667 0.00 0.00 0.00 4.85
3529 5554 2.527624 TGTGTGCCTCCTCCTGCT 60.528 61.111 0.00 0.00 0.00 4.24
3530 5555 1.229177 TGTGTGCCTCCTCCTGCTA 60.229 57.895 0.00 0.00 0.00 3.49
3531 5556 1.219393 GTGTGCCTCCTCCTGCTAC 59.781 63.158 0.00 0.00 0.00 3.58
3532 5557 2.351244 TGTGCCTCCTCCTGCTACG 61.351 63.158 0.00 0.00 0.00 3.51
3533 5558 2.759973 TGCCTCCTCCTGCTACGG 60.760 66.667 0.00 0.00 0.00 4.02
3534 5559 4.228567 GCCTCCTCCTGCTACGGC 62.229 72.222 0.00 0.00 39.26 5.68
3535 5560 3.905678 CCTCCTCCTGCTACGGCG 61.906 72.222 4.80 4.80 42.25 6.46
3536 5561 2.829003 CTCCTCCTGCTACGGCGA 60.829 66.667 16.62 0.00 42.25 5.54
3537 5562 3.127352 CTCCTCCTGCTACGGCGAC 62.127 68.421 16.62 2.68 42.25 5.19
3538 5563 4.208686 CCTCCTGCTACGGCGACC 62.209 72.222 16.62 1.01 42.25 4.79
3539 5564 3.141488 CTCCTGCTACGGCGACCT 61.141 66.667 16.62 0.00 42.25 3.85
3540 5565 3.417275 CTCCTGCTACGGCGACCTG 62.417 68.421 16.62 5.05 42.25 4.00
3563 5588 5.567138 CAAATTTGCTCCGGGATATATCC 57.433 43.478 21.82 21.82 46.41 2.59
3573 5598 2.853731 GGATATATCCGCGGACAGAG 57.146 55.000 33.75 0.00 37.19 3.35
3574 5599 1.405821 GGATATATCCGCGGACAGAGG 59.594 57.143 33.75 0.00 41.59 3.69
3578 5603 2.044352 TCCGCGGACAGAGGATCA 60.044 61.111 27.28 0.00 44.12 2.92
3579 5604 2.121538 TCCGCGGACAGAGGATCAG 61.122 63.158 27.28 0.00 44.12 2.90
3580 5605 2.418910 CCGCGGACAGAGGATCAGT 61.419 63.158 24.07 0.00 43.02 3.41
3581 5606 1.513158 CGCGGACAGAGGATCAGTT 59.487 57.895 0.00 0.00 33.82 3.16
3582 5607 0.526524 CGCGGACAGAGGATCAGTTC 60.527 60.000 0.00 0.00 33.82 3.01
3584 5609 0.811915 CGGACAGAGGATCAGTTCGT 59.188 55.000 0.00 0.00 46.95 3.85
3585 5610 1.468224 CGGACAGAGGATCAGTTCGTG 60.468 57.143 0.00 0.00 46.95 4.35
3586 5611 1.134965 GGACAGAGGATCAGTTCGTGG 60.135 57.143 0.00 0.00 33.82 4.94
3587 5612 1.819288 GACAGAGGATCAGTTCGTGGA 59.181 52.381 0.00 0.00 33.82 4.02
3588 5613 1.546476 ACAGAGGATCAGTTCGTGGAC 59.454 52.381 0.00 0.00 37.82 4.02
3589 5614 0.811915 AGAGGATCAGTTCGTGGACG 59.188 55.000 0.00 0.00 37.82 4.79
3590 5615 0.802607 GAGGATCAGTTCGTGGACGC 60.803 60.000 0.00 0.00 35.27 5.19
3591 5616 1.215647 GGATCAGTTCGTGGACGCT 59.784 57.895 0.00 0.00 39.60 5.07
3592 5617 1.078759 GGATCAGTTCGTGGACGCTG 61.079 60.000 0.00 0.00 39.60 5.18
3593 5618 0.109272 GATCAGTTCGTGGACGCTGA 60.109 55.000 10.58 10.58 40.68 4.26
3594 5619 0.532573 ATCAGTTCGTGGACGCTGAT 59.467 50.000 13.35 13.35 41.19 2.90
3595 5620 0.317160 TCAGTTCGTGGACGCTGATT 59.683 50.000 5.68 0.00 34.95 2.57
3596 5621 1.148310 CAGTTCGTGGACGCTGATTT 58.852 50.000 1.84 0.00 39.60 2.17
3597 5622 1.126846 CAGTTCGTGGACGCTGATTTC 59.873 52.381 1.84 0.00 39.60 2.17
3598 5623 1.144969 GTTCGTGGACGCTGATTTCA 58.855 50.000 0.00 0.00 39.60 2.69
3599 5624 1.529438 GTTCGTGGACGCTGATTTCAA 59.471 47.619 0.00 0.00 39.60 2.69
3600 5625 1.872388 TCGTGGACGCTGATTTCAAA 58.128 45.000 0.00 0.00 39.60 2.69
3601 5626 1.529438 TCGTGGACGCTGATTTCAAAC 59.471 47.619 0.00 0.00 39.60 2.93
3602 5627 1.262950 CGTGGACGCTGATTTCAAACA 59.737 47.619 0.00 0.00 0.00 2.83
3603 5628 2.650608 GTGGACGCTGATTTCAAACAC 58.349 47.619 0.00 0.00 0.00 3.32
3604 5629 2.290641 GTGGACGCTGATTTCAAACACT 59.709 45.455 0.00 0.00 0.00 3.55
3605 5630 2.548057 TGGACGCTGATTTCAAACACTC 59.452 45.455 0.00 0.00 0.00 3.51
3606 5631 2.808543 GGACGCTGATTTCAAACACTCT 59.191 45.455 0.00 0.00 0.00 3.24
3607 5632 3.251004 GGACGCTGATTTCAAACACTCTT 59.749 43.478 0.00 0.00 0.00 2.85
3608 5633 4.261197 GGACGCTGATTTCAAACACTCTTT 60.261 41.667 0.00 0.00 0.00 2.52
3609 5634 5.248870 ACGCTGATTTCAAACACTCTTTT 57.751 34.783 0.00 0.00 0.00 2.27
3610 5635 6.371809 ACGCTGATTTCAAACACTCTTTTA 57.628 33.333 0.00 0.00 0.00 1.52
3611 5636 6.791303 ACGCTGATTTCAAACACTCTTTTAA 58.209 32.000 0.00 0.00 0.00 1.52
3612 5637 6.691388 ACGCTGATTTCAAACACTCTTTTAAC 59.309 34.615 0.00 0.00 0.00 2.01
3613 5638 6.690957 CGCTGATTTCAAACACTCTTTTAACA 59.309 34.615 0.00 0.00 0.00 2.41
3614 5639 7.219917 CGCTGATTTCAAACACTCTTTTAACAA 59.780 33.333 0.00 0.00 0.00 2.83
3615 5640 8.868916 GCTGATTTCAAACACTCTTTTAACAAA 58.131 29.630 0.00 0.00 0.00 2.83
3617 5642 9.145865 TGATTTCAAACACTCTTTTAACAAACC 57.854 29.630 0.00 0.00 0.00 3.27
3618 5643 7.569677 TTTCAAACACTCTTTTAACAAACCG 57.430 32.000 0.00 0.00 0.00 4.44
3619 5644 6.497785 TCAAACACTCTTTTAACAAACCGA 57.502 33.333 0.00 0.00 0.00 4.69
3620 5645 6.910995 TCAAACACTCTTTTAACAAACCGAA 58.089 32.000 0.00 0.00 0.00 4.30
3621 5646 7.540299 TCAAACACTCTTTTAACAAACCGAAT 58.460 30.769 0.00 0.00 0.00 3.34
3622 5647 7.486551 TCAAACACTCTTTTAACAAACCGAATG 59.513 33.333 0.00 0.00 0.00 2.67
3623 5648 6.687081 ACACTCTTTTAACAAACCGAATGA 57.313 33.333 0.00 0.00 0.00 2.57
3624 5649 7.090953 ACACTCTTTTAACAAACCGAATGAA 57.909 32.000 0.00 0.00 0.00 2.57
3625 5650 7.540299 ACACTCTTTTAACAAACCGAATGAAA 58.460 30.769 0.00 0.00 0.00 2.69
3626 5651 8.194769 ACACTCTTTTAACAAACCGAATGAAAT 58.805 29.630 0.00 0.00 0.00 2.17
3627 5652 9.030301 CACTCTTTTAACAAACCGAATGAAATT 57.970 29.630 0.00 0.00 40.93 1.82
3642 5667 6.922247 AATGAAATTCATGCAAACACAACA 57.078 29.167 9.47 0.00 37.15 3.33
3643 5668 5.970140 TGAAATTCATGCAAACACAACAG 57.030 34.783 0.00 0.00 0.00 3.16
3644 5669 5.658468 TGAAATTCATGCAAACACAACAGA 58.342 33.333 0.00 0.00 0.00 3.41
3645 5670 6.282167 TGAAATTCATGCAAACACAACAGAT 58.718 32.000 0.00 0.00 0.00 2.90
3646 5671 7.432059 TGAAATTCATGCAAACACAACAGATA 58.568 30.769 0.00 0.00 0.00 1.98
3647 5672 8.089597 TGAAATTCATGCAAACACAACAGATAT 58.910 29.630 0.00 0.00 0.00 1.63
3648 5673 8.470040 AAATTCATGCAAACACAACAGATATC 57.530 30.769 0.00 0.00 0.00 1.63
3649 5674 6.572167 TTCATGCAAACACAACAGATATCA 57.428 33.333 5.32 0.00 0.00 2.15
3650 5675 6.762702 TCATGCAAACACAACAGATATCAT 57.237 33.333 5.32 0.00 0.00 2.45
3651 5676 7.862512 TCATGCAAACACAACAGATATCATA 57.137 32.000 5.32 0.00 0.00 2.15
3652 5677 7.696755 TCATGCAAACACAACAGATATCATAC 58.303 34.615 5.32 0.00 0.00 2.39
3653 5678 7.553760 TCATGCAAACACAACAGATATCATACT 59.446 33.333 5.32 0.00 0.00 2.12
3654 5679 8.829612 CATGCAAACACAACAGATATCATACTA 58.170 33.333 5.32 0.00 0.00 1.82
3655 5680 8.785329 TGCAAACACAACAGATATCATACTAA 57.215 30.769 5.32 0.00 0.00 2.24
3656 5681 8.664798 TGCAAACACAACAGATATCATACTAAC 58.335 33.333 5.32 0.00 0.00 2.34
3657 5682 8.122952 GCAAACACAACAGATATCATACTAACC 58.877 37.037 5.32 0.00 0.00 2.85
3658 5683 8.328146 CAAACACAACAGATATCATACTAACCG 58.672 37.037 5.32 0.00 0.00 4.44
3659 5684 7.342769 ACACAACAGATATCATACTAACCGA 57.657 36.000 5.32 0.00 0.00 4.69
3660 5685 7.778083 ACACAACAGATATCATACTAACCGAA 58.222 34.615 5.32 0.00 0.00 4.30
3661 5686 7.705325 ACACAACAGATATCATACTAACCGAAC 59.295 37.037 5.32 0.00 0.00 3.95
3662 5687 7.704899 CACAACAGATATCATACTAACCGAACA 59.295 37.037 5.32 0.00 0.00 3.18
3663 5688 8.255206 ACAACAGATATCATACTAACCGAACAA 58.745 33.333 5.32 0.00 0.00 2.83
3664 5689 9.093970 CAACAGATATCATACTAACCGAACAAA 57.906 33.333 5.32 0.00 0.00 2.83
3665 5690 9.661563 AACAGATATCATACTAACCGAACAAAA 57.338 29.630 5.32 0.00 0.00 2.44
3666 5691 9.095065 ACAGATATCATACTAACCGAACAAAAC 57.905 33.333 5.32 0.00 0.00 2.43
3667 5692 8.266682 CAGATATCATACTAACCGAACAAAACG 58.733 37.037 5.32 0.00 0.00 3.60
3668 5693 7.977853 AGATATCATACTAACCGAACAAAACGT 59.022 33.333 5.32 0.00 0.00 3.99
3669 5694 6.790285 ATCATACTAACCGAACAAAACGTT 57.210 33.333 0.00 0.00 41.86 3.99
3670 5695 6.601741 TCATACTAACCGAACAAAACGTTT 57.398 33.333 7.96 7.96 38.19 3.60
3671 5696 7.706281 TCATACTAACCGAACAAAACGTTTA 57.294 32.000 15.03 0.00 38.19 2.01
3672 5697 8.309163 TCATACTAACCGAACAAAACGTTTAT 57.691 30.769 15.03 2.69 38.19 1.40
3673 5698 9.416794 TCATACTAACCGAACAAAACGTTTATA 57.583 29.630 15.03 0.00 38.19 0.98
3677 5702 9.949174 ACTAACCGAACAAAACGTTTATATTTT 57.051 25.926 15.03 3.29 38.19 1.82
3681 5706 9.597999 ACCGAACAAAACGTTTATATTTTAGAC 57.402 29.630 15.03 0.00 38.19 2.59
3682 5707 9.596677 CCGAACAAAACGTTTATATTTTAGACA 57.403 29.630 15.03 0.00 38.19 3.41
3722 5747 9.884636 ACCTAATAATAAAGCAAATTGGGTTTC 57.115 29.630 13.18 0.00 39.36 2.78
3727 5752 7.420184 AATAAAGCAAATTGGGTTTCTTTCG 57.580 32.000 13.18 0.00 39.10 3.46
3728 5753 4.400529 AAGCAAATTGGGTTTCTTTCGT 57.599 36.364 0.00 0.00 0.00 3.85
3729 5754 3.977427 AGCAAATTGGGTTTCTTTCGTC 58.023 40.909 0.00 0.00 0.00 4.20
3730 5755 3.057019 GCAAATTGGGTTTCTTTCGTCC 58.943 45.455 0.00 0.00 0.00 4.79
3731 5756 3.305110 CAAATTGGGTTTCTTTCGTCCG 58.695 45.455 0.00 0.00 0.00 4.79
3732 5757 2.265589 ATTGGGTTTCTTTCGTCCGT 57.734 45.000 0.00 0.00 0.00 4.69
3733 5758 1.585297 TTGGGTTTCTTTCGTCCGTC 58.415 50.000 0.00 0.00 0.00 4.79
3734 5759 0.464870 TGGGTTTCTTTCGTCCGTCA 59.535 50.000 0.00 0.00 0.00 4.35
3735 5760 1.071071 TGGGTTTCTTTCGTCCGTCAT 59.929 47.619 0.00 0.00 0.00 3.06
3736 5761 1.463444 GGGTTTCTTTCGTCCGTCATG 59.537 52.381 0.00 0.00 0.00 3.07
3737 5762 2.409975 GGTTTCTTTCGTCCGTCATGA 58.590 47.619 0.00 0.00 0.00 3.07
3738 5763 2.157085 GGTTTCTTTCGTCCGTCATGAC 59.843 50.000 16.21 16.21 0.00 3.06
3739 5764 2.798283 GTTTCTTTCGTCCGTCATGACA 59.202 45.455 24.93 4.12 34.88 3.58
3740 5765 3.313012 TTCTTTCGTCCGTCATGACAT 57.687 42.857 24.93 0.00 34.88 3.06
3741 5766 3.313012 TCTTTCGTCCGTCATGACATT 57.687 42.857 24.93 0.00 34.88 2.71
3742 5767 3.659786 TCTTTCGTCCGTCATGACATTT 58.340 40.909 24.93 0.00 34.88 2.32
3743 5768 4.062293 TCTTTCGTCCGTCATGACATTTT 58.938 39.130 24.93 0.00 34.88 1.82
3744 5769 4.513692 TCTTTCGTCCGTCATGACATTTTT 59.486 37.500 24.93 0.00 34.88 1.94
3745 5770 4.398549 TTCGTCCGTCATGACATTTTTC 57.601 40.909 24.93 8.17 34.88 2.29
3746 5771 3.394719 TCGTCCGTCATGACATTTTTCA 58.605 40.909 24.93 0.11 34.88 2.69
3747 5772 3.431912 TCGTCCGTCATGACATTTTTCAG 59.568 43.478 24.93 6.41 34.88 3.02
3748 5773 3.431912 CGTCCGTCATGACATTTTTCAGA 59.568 43.478 24.93 5.84 34.88 3.27
3749 5774 4.084066 CGTCCGTCATGACATTTTTCAGAA 60.084 41.667 24.93 0.00 34.88 3.02
3750 5775 5.559991 CGTCCGTCATGACATTTTTCAGAAA 60.560 40.000 24.93 0.00 34.88 2.52
3751 5776 6.205784 GTCCGTCATGACATTTTTCAGAAAA 58.794 36.000 24.93 4.06 38.96 2.29
3752 5777 6.360681 GTCCGTCATGACATTTTTCAGAAAAG 59.639 38.462 24.93 3.90 38.09 2.27
3753 5778 6.039270 TCCGTCATGACATTTTTCAGAAAAGT 59.961 34.615 24.93 3.20 38.09 2.66
3754 5779 6.360681 CCGTCATGACATTTTTCAGAAAAGTC 59.639 38.462 24.93 16.10 38.09 3.01
3755 5780 7.134815 CGTCATGACATTTTTCAGAAAAGTCT 58.865 34.615 24.93 4.65 38.09 3.24
3756 5781 7.322222 CGTCATGACATTTTTCAGAAAAGTCTC 59.678 37.037 24.93 12.02 38.09 3.36
3757 5782 8.348507 GTCATGACATTTTTCAGAAAAGTCTCT 58.651 33.333 21.07 10.92 38.09 3.10
3758 5783 8.562892 TCATGACATTTTTCAGAAAAGTCTCTC 58.437 33.333 20.52 9.59 38.09 3.20
3759 5784 8.566260 CATGACATTTTTCAGAAAAGTCTCTCT 58.434 33.333 20.52 7.66 38.09 3.10
3760 5785 9.784531 ATGACATTTTTCAGAAAAGTCTCTCTA 57.215 29.630 20.52 7.84 38.09 2.43
3761 5786 9.784531 TGACATTTTTCAGAAAAGTCTCTCTAT 57.215 29.630 20.52 5.05 38.09 1.98
3783 5808 8.826765 TCTATTTCAGAGAATTTAACCTGGAGT 58.173 33.333 0.00 0.00 0.00 3.85
3784 5809 7.929941 ATTTCAGAGAATTTAACCTGGAGTC 57.070 36.000 0.00 0.00 0.00 3.36
3785 5810 5.422214 TCAGAGAATTTAACCTGGAGTCC 57.578 43.478 0.73 0.73 0.00 3.85
3786 5811 5.094387 TCAGAGAATTTAACCTGGAGTCCT 58.906 41.667 11.33 0.00 0.00 3.85
3787 5812 5.046304 TCAGAGAATTTAACCTGGAGTCCTG 60.046 44.000 11.33 10.11 0.00 3.86
3788 5813 4.846940 AGAGAATTTAACCTGGAGTCCTGT 59.153 41.667 11.33 4.87 0.00 4.00
3789 5814 5.310857 AGAGAATTTAACCTGGAGTCCTGTT 59.689 40.000 17.91 17.91 0.00 3.16
3790 5815 5.953571 AGAATTTAACCTGGAGTCCTGTTT 58.046 37.500 18.70 12.26 0.00 2.83
3791 5816 6.373759 AGAATTTAACCTGGAGTCCTGTTTT 58.626 36.000 18.70 12.13 0.00 2.43
3792 5817 7.523415 AGAATTTAACCTGGAGTCCTGTTTTA 58.477 34.615 18.70 11.33 0.00 1.52
3793 5818 8.002459 AGAATTTAACCTGGAGTCCTGTTTTAA 58.998 33.333 18.70 15.34 0.00 1.52
3794 5819 7.761038 ATTTAACCTGGAGTCCTGTTTTAAG 57.239 36.000 18.70 3.68 0.00 1.85
3795 5820 4.790718 AACCTGGAGTCCTGTTTTAAGT 57.209 40.909 11.33 0.00 0.00 2.24
3796 5821 4.790718 ACCTGGAGTCCTGTTTTAAGTT 57.209 40.909 11.33 0.00 0.00 2.66
3797 5822 5.899631 ACCTGGAGTCCTGTTTTAAGTTA 57.100 39.130 11.33 0.00 0.00 2.24
3798 5823 6.256643 ACCTGGAGTCCTGTTTTAAGTTAA 57.743 37.500 11.33 0.00 0.00 2.01
3799 5824 6.665695 ACCTGGAGTCCTGTTTTAAGTTAAA 58.334 36.000 11.33 3.88 0.00 1.52
3800 5825 7.120716 ACCTGGAGTCCTGTTTTAAGTTAAAA 58.879 34.615 15.29 15.29 35.45 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.398318 AACAAAGAAGGGTCTTGGGTT 57.602 42.857 0.00 0.00 43.59 4.11
2 3 7.533289 TTAAATAACAAAGAAGGGTCTTGGG 57.467 36.000 0.00 0.00 43.59 4.12
3 4 8.585018 ACATTAAATAACAAAGAAGGGTCTTGG 58.415 33.333 0.00 0.00 43.59 3.61
4 5 9.981114 AACATTAAATAACAAAGAAGGGTCTTG 57.019 29.630 0.00 0.00 43.59 3.02
5 6 9.981114 CAACATTAAATAACAAAGAAGGGTCTT 57.019 29.630 0.00 0.00 46.47 3.01
6 7 9.143155 ACAACATTAAATAACAAAGAAGGGTCT 57.857 29.630 0.00 0.00 34.72 3.85
8 9 9.758651 GAACAACATTAAATAACAAAGAAGGGT 57.241 29.630 0.00 0.00 0.00 4.34
9 10 9.757227 TGAACAACATTAAATAACAAAGAAGGG 57.243 29.630 0.00 0.00 0.00 3.95
27 28 9.190858 GCATTTTGTTGATAGTATTGAACAACA 57.809 29.630 15.73 12.95 45.36 3.33
28 29 9.190858 TGCATTTTGTTGATAGTATTGAACAAC 57.809 29.630 15.73 11.10 37.88 3.32
29 30 9.755804 TTGCATTTTGTTGATAGTATTGAACAA 57.244 25.926 13.50 13.50 36.71 2.83
30 31 9.755804 TTTGCATTTTGTTGATAGTATTGAACA 57.244 25.926 0.00 5.12 0.00 3.18
32 33 9.755804 TGTTTGCATTTTGTTGATAGTATTGAA 57.244 25.926 0.00 0.00 0.00 2.69
108 111 3.887621 TTCTACTCCCTTCGTTCCATG 57.112 47.619 0.00 0.00 0.00 3.66
114 117 4.884668 TGTTTCATTCTACTCCCTTCGT 57.115 40.909 0.00 0.00 0.00 3.85
123 126 5.532557 AGCCTGCTTTTTGTTTCATTCTAC 58.467 37.500 0.00 0.00 0.00 2.59
127 130 5.275067 TGTAGCCTGCTTTTTGTTTCATT 57.725 34.783 0.00 0.00 0.00 2.57
128 131 4.935352 TGTAGCCTGCTTTTTGTTTCAT 57.065 36.364 0.00 0.00 0.00 2.57
129 132 4.935352 ATGTAGCCTGCTTTTTGTTTCA 57.065 36.364 0.00 0.00 0.00 2.69
130 133 5.532557 AGAATGTAGCCTGCTTTTTGTTTC 58.467 37.500 0.00 0.00 0.00 2.78
131 134 5.535753 AGAATGTAGCCTGCTTTTTGTTT 57.464 34.783 0.00 0.00 0.00 2.83
165 168 0.740868 CCCATGACGTGCCAGTGTAG 60.741 60.000 0.00 0.00 0.00 2.74
198 206 1.748879 GCTTGCGTATGGGGCAGAA 60.749 57.895 0.00 0.00 42.12 3.02
199 207 2.124736 GCTTGCGTATGGGGCAGA 60.125 61.111 0.00 0.00 42.12 4.26
242 255 4.687483 GGTCAAATTTGTCAATTCTGCCTG 59.313 41.667 17.47 0.00 30.80 4.85
243 256 4.590222 AGGTCAAATTTGTCAATTCTGCCT 59.410 37.500 17.47 9.19 30.80 4.75
244 257 4.886579 AGGTCAAATTTGTCAATTCTGCC 58.113 39.130 17.47 7.45 30.80 4.85
245 258 5.984926 TCAAGGTCAAATTTGTCAATTCTGC 59.015 36.000 17.47 0.00 30.80 4.26
246 259 7.707893 ACTTCAAGGTCAAATTTGTCAATTCTG 59.292 33.333 17.47 7.72 30.80 3.02
247 260 7.707893 CACTTCAAGGTCAAATTTGTCAATTCT 59.292 33.333 17.47 2.63 30.80 2.40
248 261 7.706179 TCACTTCAAGGTCAAATTTGTCAATTC 59.294 33.333 17.47 0.41 30.80 2.17
249 262 7.555087 TCACTTCAAGGTCAAATTTGTCAATT 58.445 30.769 17.47 8.32 33.72 2.32
250 263 7.111247 TCACTTCAAGGTCAAATTTGTCAAT 57.889 32.000 17.47 2.76 0.00 2.57
251 264 6.522625 TCACTTCAAGGTCAAATTTGTCAA 57.477 33.333 17.47 2.58 0.00 3.18
252 265 6.522625 TTCACTTCAAGGTCAAATTTGTCA 57.477 33.333 17.47 0.00 0.00 3.58
253 266 7.035612 ACTTTCACTTCAAGGTCAAATTTGTC 58.964 34.615 17.47 12.07 0.00 3.18
254 267 6.935167 ACTTTCACTTCAAGGTCAAATTTGT 58.065 32.000 17.47 0.00 0.00 2.83
255 268 9.533253 AATACTTTCACTTCAAGGTCAAATTTG 57.467 29.630 12.15 12.15 0.00 2.32
257 270 9.750125 GAAATACTTTCACTTCAAGGTCAAATT 57.250 29.630 0.00 0.00 39.45 1.82
258 271 8.912988 TGAAATACTTTCACTTCAAGGTCAAAT 58.087 29.630 0.00 0.00 44.21 2.32
259 272 8.287439 TGAAATACTTTCACTTCAAGGTCAAA 57.713 30.769 0.00 0.00 44.21 2.69
260 273 7.873719 TGAAATACTTTCACTTCAAGGTCAA 57.126 32.000 0.00 0.00 44.21 3.18
318 331 1.136891 GTTGGGAGCTGCACAAAAAGT 59.863 47.619 7.79 0.00 42.62 2.66
319 332 1.136695 TGTTGGGAGCTGCACAAAAAG 59.863 47.619 7.79 0.00 42.62 2.27
320 333 1.136695 CTGTTGGGAGCTGCACAAAAA 59.863 47.619 7.79 1.06 42.62 1.94
321 334 0.746063 CTGTTGGGAGCTGCACAAAA 59.254 50.000 7.79 3.47 42.62 2.44
322 335 0.395586 ACTGTTGGGAGCTGCACAAA 60.396 50.000 7.79 0.00 42.62 2.83
323 336 0.472044 TACTGTTGGGAGCTGCACAA 59.528 50.000 7.79 6.30 37.63 3.33
324 337 0.472044 TTACTGTTGGGAGCTGCACA 59.528 50.000 7.79 2.60 0.00 4.57
325 338 1.160137 CTTACTGTTGGGAGCTGCAC 58.840 55.000 7.79 0.00 0.00 4.57
326 339 0.036732 CCTTACTGTTGGGAGCTGCA 59.963 55.000 7.79 0.00 0.00 4.41
327 340 1.308783 GCCTTACTGTTGGGAGCTGC 61.309 60.000 0.00 0.00 0.00 5.25
328 341 1.021390 CGCCTTACTGTTGGGAGCTG 61.021 60.000 0.00 0.00 0.00 4.24
329 342 1.296715 CGCCTTACTGTTGGGAGCT 59.703 57.895 0.00 0.00 0.00 4.09
330 343 2.399356 GCGCCTTACTGTTGGGAGC 61.399 63.158 0.00 10.35 38.57 4.70
331 344 1.021390 CAGCGCCTTACTGTTGGGAG 61.021 60.000 2.29 1.61 0.00 4.30
332 345 1.003839 CAGCGCCTTACTGTTGGGA 60.004 57.895 2.29 0.00 0.00 4.37
333 346 2.690778 GCAGCGCCTTACTGTTGGG 61.691 63.158 2.29 0.00 37.47 4.12
334 347 1.965930 TGCAGCGCCTTACTGTTGG 60.966 57.895 2.29 0.00 37.47 3.77
335 348 1.207593 GTGCAGCGCCTTACTGTTG 59.792 57.895 2.29 0.00 37.47 3.33
336 349 0.951040 GAGTGCAGCGCCTTACTGTT 60.951 55.000 2.29 0.00 37.47 3.16
337 350 1.374758 GAGTGCAGCGCCTTACTGT 60.375 57.895 2.29 0.00 37.47 3.55
338 351 0.173481 TAGAGTGCAGCGCCTTACTG 59.827 55.000 2.29 0.00 38.22 2.74
339 352 0.173708 GTAGAGTGCAGCGCCTTACT 59.826 55.000 2.29 5.65 0.00 2.24
340 353 0.173708 AGTAGAGTGCAGCGCCTTAC 59.826 55.000 2.29 5.89 0.00 2.34
341 354 0.173481 CAGTAGAGTGCAGCGCCTTA 59.827 55.000 2.29 0.00 0.00 2.69
342 355 1.079543 CAGTAGAGTGCAGCGCCTT 60.080 57.895 2.29 0.00 0.00 4.35
343 356 2.279069 ACAGTAGAGTGCAGCGCCT 61.279 57.895 2.29 2.26 0.00 5.52
344 357 2.097038 CACAGTAGAGTGCAGCGCC 61.097 63.158 2.29 0.00 32.04 6.53
345 358 3.468007 CACAGTAGAGTGCAGCGC 58.532 61.111 0.00 0.00 32.04 5.92
351 364 3.393089 AAGGAGTTGCACAGTAGAGTG 57.607 47.619 0.00 0.00 42.37 3.51
352 365 3.895656 TGTAAGGAGTTGCACAGTAGAGT 59.104 43.478 0.00 0.00 0.00 3.24
353 366 4.489810 CTGTAAGGAGTTGCACAGTAGAG 58.510 47.826 0.00 0.00 34.91 2.43
354 367 4.521130 CTGTAAGGAGTTGCACAGTAGA 57.479 45.455 0.00 0.00 34.91 2.59
358 371 3.997021 CCTAACTGTAAGGAGTTGCACAG 59.003 47.826 0.00 0.00 43.21 3.66
359 372 3.805807 GCCTAACTGTAAGGAGTTGCACA 60.806 47.826 0.00 0.00 39.30 4.57
360 373 2.742589 GCCTAACTGTAAGGAGTTGCAC 59.257 50.000 0.00 0.00 39.30 4.57
361 374 2.611971 CGCCTAACTGTAAGGAGTTGCA 60.612 50.000 0.00 0.00 39.30 4.08
362 375 2.000447 CGCCTAACTGTAAGGAGTTGC 59.000 52.381 0.00 0.00 39.30 4.17
363 376 2.000447 GCGCCTAACTGTAAGGAGTTG 59.000 52.381 0.00 0.00 39.30 3.16
364 377 1.900486 AGCGCCTAACTGTAAGGAGTT 59.100 47.619 2.29 0.00 39.30 3.01
365 378 1.204941 CAGCGCCTAACTGTAAGGAGT 59.795 52.381 2.29 0.00 39.30 3.85
366 379 1.927895 CAGCGCCTAACTGTAAGGAG 58.072 55.000 2.29 0.00 39.30 3.69
367 380 0.108329 GCAGCGCCTAACTGTAAGGA 60.108 55.000 2.29 0.00 39.30 3.36
368 381 0.391130 TGCAGCGCCTAACTGTAAGG 60.391 55.000 2.29 0.00 39.30 2.69
369 382 0.721718 GTGCAGCGCCTAACTGTAAG 59.278 55.000 2.29 0.00 37.47 2.34
370 383 0.034198 TGTGCAGCGCCTAACTGTAA 59.966 50.000 2.29 0.00 37.47 2.41
371 384 0.389817 CTGTGCAGCGCCTAACTGTA 60.390 55.000 2.29 0.00 37.47 2.74
372 385 1.669115 CTGTGCAGCGCCTAACTGT 60.669 57.895 2.29 0.00 37.47 3.55
373 386 1.669115 ACTGTGCAGCGCCTAACTG 60.669 57.895 2.29 6.54 38.22 3.16
374 387 1.669115 CACTGTGCAGCGCCTAACT 60.669 57.895 2.29 0.00 0.00 2.24
375 388 0.669318 TACACTGTGCAGCGCCTAAC 60.669 55.000 2.29 0.00 0.00 2.34
376 389 0.389817 CTACACTGTGCAGCGCCTAA 60.390 55.000 2.29 0.00 0.00 2.69
377 390 1.215382 CTACACTGTGCAGCGCCTA 59.785 57.895 2.29 0.00 0.00 3.93
378 391 2.047844 CTACACTGTGCAGCGCCT 60.048 61.111 2.29 0.00 0.00 5.52
379 392 2.357517 ACTACACTGTGCAGCGCC 60.358 61.111 2.29 0.00 0.00 6.53
380 393 2.856032 CACTACACTGTGCAGCGC 59.144 61.111 7.90 0.00 0.00 5.92
386 399 0.319728 AGGAGCTGCACTACACTGTG 59.680 55.000 8.35 6.19 40.62 3.66
387 400 1.051812 AAGGAGCTGCACTACACTGT 58.948 50.000 8.35 0.00 0.00 3.55
388 401 2.029020 TGTAAGGAGCTGCACTACACTG 60.029 50.000 8.35 0.00 0.00 3.66
389 402 2.232452 CTGTAAGGAGCTGCACTACACT 59.768 50.000 8.35 0.00 0.00 3.55
390 403 2.611518 CTGTAAGGAGCTGCACTACAC 58.388 52.381 8.35 2.76 0.00 2.90
391 404 1.066858 GCTGTAAGGAGCTGCACTACA 60.067 52.381 8.35 13.24 35.95 2.74
392 405 1.646189 GCTGTAAGGAGCTGCACTAC 58.354 55.000 8.35 9.15 35.95 2.73
400 413 0.175989 AACGCCTAGCTGTAAGGAGC 59.824 55.000 5.13 0.00 37.43 4.70
401 414 1.927895 CAACGCCTAGCTGTAAGGAG 58.072 55.000 5.13 4.23 39.58 3.69
402 415 0.108329 GCAACGCCTAGCTGTAAGGA 60.108 55.000 5.13 0.00 36.08 3.36
403 416 0.391130 TGCAACGCCTAGCTGTAAGG 60.391 55.000 0.00 0.00 37.17 2.69
404 417 0.721718 GTGCAACGCCTAGCTGTAAG 59.278 55.000 0.00 0.00 0.00 2.34
405 418 0.034198 TGTGCAACGCCTAGCTGTAA 59.966 50.000 0.00 0.00 42.39 2.41
406 419 0.389817 CTGTGCAACGCCTAGCTGTA 60.390 55.000 0.00 0.00 42.39 2.74
407 420 1.669115 CTGTGCAACGCCTAGCTGT 60.669 57.895 0.00 0.00 42.39 4.40
408 421 0.389817 TACTGTGCAACGCCTAGCTG 60.390 55.000 0.00 0.00 42.39 4.24
409 422 0.537188 ATACTGTGCAACGCCTAGCT 59.463 50.000 0.00 0.00 42.39 3.32
410 423 0.652592 CATACTGTGCAACGCCTAGC 59.347 55.000 0.00 0.00 42.39 3.42
411 424 1.290203 CCATACTGTGCAACGCCTAG 58.710 55.000 0.00 0.00 42.39 3.02
412 425 0.742990 GCCATACTGTGCAACGCCTA 60.743 55.000 0.00 0.00 42.39 3.93
413 426 2.040544 GCCATACTGTGCAACGCCT 61.041 57.895 0.00 0.00 42.39 5.52
414 427 2.485122 GCCATACTGTGCAACGCC 59.515 61.111 0.00 0.00 42.39 5.68
415 428 2.098298 CGCCATACTGTGCAACGC 59.902 61.111 0.00 0.00 42.39 4.84
416 429 2.098298 GCGCCATACTGTGCAACG 59.902 61.111 0.00 0.00 42.39 4.10
420 433 1.063006 CACATGCGCCATACTGTGC 59.937 57.895 4.18 0.00 42.05 4.57
421 434 1.717791 CCCACATGCGCCATACTGTG 61.718 60.000 4.18 10.70 38.92 3.66
422 435 1.451927 CCCACATGCGCCATACTGT 60.452 57.895 4.18 0.00 0.00 3.55
423 436 1.031571 AACCCACATGCGCCATACTG 61.032 55.000 4.18 0.00 0.00 2.74
424 437 0.544223 TAACCCACATGCGCCATACT 59.456 50.000 4.18 0.00 0.00 2.12
425 438 0.944386 CTAACCCACATGCGCCATAC 59.056 55.000 4.18 0.00 0.00 2.39
426 439 0.179032 CCTAACCCACATGCGCCATA 60.179 55.000 4.18 0.00 0.00 2.74
427 440 1.453745 CCTAACCCACATGCGCCAT 60.454 57.895 4.18 0.00 0.00 4.40
428 441 2.045438 CCTAACCCACATGCGCCA 60.045 61.111 4.18 0.00 0.00 5.69
429 442 3.518068 GCCTAACCCACATGCGCC 61.518 66.667 4.18 0.00 0.00 6.53
430 443 3.876198 CGCCTAACCCACATGCGC 61.876 66.667 0.00 0.00 38.69 6.09
432 445 2.438434 AGCGCCTAACCCACATGC 60.438 61.111 2.29 0.00 0.00 4.06
433 446 2.764314 GCAGCGCCTAACCCACATG 61.764 63.158 2.29 0.00 0.00 3.21
434 447 2.438434 GCAGCGCCTAACCCACAT 60.438 61.111 2.29 0.00 0.00 3.21
435 448 3.947459 TGCAGCGCCTAACCCACA 61.947 61.111 2.29 0.00 0.00 4.17
436 449 3.431725 GTGCAGCGCCTAACCCAC 61.432 66.667 2.29 0.00 0.00 4.61
438 451 2.638330 TATCGTGCAGCGCCTAACCC 62.638 60.000 2.29 0.00 41.07 4.11
439 452 0.808453 TTATCGTGCAGCGCCTAACC 60.808 55.000 2.29 0.00 41.07 2.85
440 453 0.577269 CTTATCGTGCAGCGCCTAAC 59.423 55.000 2.29 0.00 41.07 2.34
441 454 0.458260 TCTTATCGTGCAGCGCCTAA 59.542 50.000 2.29 0.00 41.07 2.69
442 455 0.030773 CTCTTATCGTGCAGCGCCTA 59.969 55.000 2.29 0.00 41.07 3.93
443 456 1.227089 CTCTTATCGTGCAGCGCCT 60.227 57.895 2.29 0.00 41.07 5.52
444 457 1.519455 ACTCTTATCGTGCAGCGCC 60.519 57.895 2.29 0.00 41.07 6.53
445 458 1.078759 ACACTCTTATCGTGCAGCGC 61.079 55.000 0.00 0.00 41.07 5.92
446 459 2.188837 TACACTCTTATCGTGCAGCG 57.811 50.000 0.00 0.00 43.01 5.18
447 460 2.279136 CGTTACACTCTTATCGTGCAGC 59.721 50.000 0.00 0.00 35.84 5.25
448 461 2.279136 GCGTTACACTCTTATCGTGCAG 59.721 50.000 0.00 0.00 35.84 4.41
449 462 2.094906 AGCGTTACACTCTTATCGTGCA 60.095 45.455 0.00 0.00 35.84 4.57
450 463 2.527100 AGCGTTACACTCTTATCGTGC 58.473 47.619 0.00 0.00 35.84 5.34
451 464 4.721226 GCAAAGCGTTACACTCTTATCGTG 60.721 45.833 0.00 0.00 38.32 4.35
452 465 3.367025 GCAAAGCGTTACACTCTTATCGT 59.633 43.478 0.00 0.00 0.00 3.73
453 466 3.612860 AGCAAAGCGTTACACTCTTATCG 59.387 43.478 0.00 0.00 0.00 2.92
454 467 4.389077 ACAGCAAAGCGTTACACTCTTATC 59.611 41.667 0.00 0.00 0.00 1.75
455 468 4.315803 ACAGCAAAGCGTTACACTCTTAT 58.684 39.130 0.00 0.00 0.00 1.73
456 469 3.724374 ACAGCAAAGCGTTACACTCTTA 58.276 40.909 0.00 0.00 0.00 2.10
457 470 2.561569 ACAGCAAAGCGTTACACTCTT 58.438 42.857 0.00 0.00 0.00 2.85
458 471 2.240493 ACAGCAAAGCGTTACACTCT 57.760 45.000 0.00 0.00 0.00 3.24
459 472 2.602217 CCAACAGCAAAGCGTTACACTC 60.602 50.000 0.00 0.00 0.00 3.51
460 473 1.333619 CCAACAGCAAAGCGTTACACT 59.666 47.619 0.00 0.00 0.00 3.55
461 474 1.599419 CCCAACAGCAAAGCGTTACAC 60.599 52.381 0.00 0.00 0.00 2.90
462 475 0.665835 CCCAACAGCAAAGCGTTACA 59.334 50.000 0.00 0.00 0.00 2.41
463 476 0.663269 GCCCAACAGCAAAGCGTTAC 60.663 55.000 0.00 0.00 0.00 2.50
464 477 1.657556 GCCCAACAGCAAAGCGTTA 59.342 52.632 0.00 0.00 0.00 3.18
465 478 2.417097 GCCCAACAGCAAAGCGTT 59.583 55.556 0.00 0.00 0.00 4.84
466 479 3.964875 CGCCCAACAGCAAAGCGT 61.965 61.111 0.00 0.00 41.78 5.07
468 481 3.982241 AGCGCCCAACAGCAAAGC 61.982 61.111 2.29 0.00 35.48 3.51
469 482 2.049802 CAGCGCCCAACAGCAAAG 60.050 61.111 2.29 0.00 35.48 2.77
470 483 4.283403 GCAGCGCCCAACAGCAAA 62.283 61.111 2.29 0.00 35.48 3.68
474 487 1.585267 TAATGTGCAGCGCCCAACAG 61.585 55.000 2.29 0.00 0.00 3.16
475 488 1.585267 CTAATGTGCAGCGCCCAACA 61.585 55.000 2.29 6.42 0.00 3.33
476 489 1.137404 CTAATGTGCAGCGCCCAAC 59.863 57.895 2.29 0.00 0.00 3.77
477 490 1.002746 TCTAATGTGCAGCGCCCAA 60.003 52.632 2.29 0.00 0.00 4.12
478 491 1.450134 CTCTAATGTGCAGCGCCCA 60.450 57.895 2.29 0.00 0.00 5.36
479 492 2.182842 CCTCTAATGTGCAGCGCCC 61.183 63.158 2.29 0.00 0.00 6.13
480 493 1.432270 GACCTCTAATGTGCAGCGCC 61.432 60.000 2.29 0.00 0.00 6.53
481 494 0.740868 TGACCTCTAATGTGCAGCGC 60.741 55.000 0.00 0.00 0.00 5.92
482 495 1.284657 CTGACCTCTAATGTGCAGCG 58.715 55.000 0.00 0.00 0.00 5.18
483 496 1.012841 GCTGACCTCTAATGTGCAGC 58.987 55.000 0.00 0.00 41.38 5.25
484 497 2.277969 CAGCTGACCTCTAATGTGCAG 58.722 52.381 8.42 0.00 0.00 4.41
485 498 1.065926 CCAGCTGACCTCTAATGTGCA 60.066 52.381 17.39 0.00 0.00 4.57
486 499 1.208052 TCCAGCTGACCTCTAATGTGC 59.792 52.381 17.39 0.00 0.00 4.57
487 500 3.133542 TCATCCAGCTGACCTCTAATGTG 59.866 47.826 17.39 0.00 0.00 3.21
488 501 3.378512 TCATCCAGCTGACCTCTAATGT 58.621 45.455 17.39 0.00 0.00 2.71
489 502 4.412796 TTCATCCAGCTGACCTCTAATG 57.587 45.455 17.39 7.08 0.00 1.90
490 503 5.643421 ATTTCATCCAGCTGACCTCTAAT 57.357 39.130 17.39 4.81 0.00 1.73
491 504 5.663106 AGTATTTCATCCAGCTGACCTCTAA 59.337 40.000 17.39 2.47 0.00 2.10
492 505 5.211973 AGTATTTCATCCAGCTGACCTCTA 58.788 41.667 17.39 0.00 0.00 2.43
493 506 4.036518 AGTATTTCATCCAGCTGACCTCT 58.963 43.478 17.39 0.00 0.00 3.69
494 507 4.414337 AGTATTTCATCCAGCTGACCTC 57.586 45.455 17.39 0.00 0.00 3.85
495 508 4.851639 AAGTATTTCATCCAGCTGACCT 57.148 40.909 17.39 0.00 0.00 3.85
525 538 8.340443 GGACGAAACTATTTCACAAACTAAACT 58.660 33.333 0.00 0.00 39.63 2.66
526 539 8.340443 AGGACGAAACTATTTCACAAACTAAAC 58.660 33.333 0.00 0.00 39.63 2.01
527 540 8.339714 CAGGACGAAACTATTTCACAAACTAAA 58.660 33.333 0.00 0.00 39.63 1.85
528 541 7.711772 TCAGGACGAAACTATTTCACAAACTAA 59.288 33.333 0.00 0.00 39.63 2.24
529 542 7.211573 TCAGGACGAAACTATTTCACAAACTA 58.788 34.615 0.00 0.00 39.63 2.24
530 543 6.053005 TCAGGACGAAACTATTTCACAAACT 58.947 36.000 0.00 0.00 39.63 2.66
531 544 6.295039 TCAGGACGAAACTATTTCACAAAC 57.705 37.500 0.00 0.00 39.63 2.93
532 545 6.540914 ACTTCAGGACGAAACTATTTCACAAA 59.459 34.615 0.00 0.00 39.63 2.83
533 546 6.053005 ACTTCAGGACGAAACTATTTCACAA 58.947 36.000 0.00 0.00 39.63 3.33
534 547 5.607477 ACTTCAGGACGAAACTATTTCACA 58.393 37.500 0.00 0.00 39.63 3.58
535 548 5.694910 TGACTTCAGGACGAAACTATTTCAC 59.305 40.000 0.00 0.00 39.63 3.18
536 549 5.849510 TGACTTCAGGACGAAACTATTTCA 58.150 37.500 0.00 0.00 39.63 2.69
537 550 6.780706 TTGACTTCAGGACGAAACTATTTC 57.219 37.500 0.00 0.00 36.32 2.17
538 551 7.745620 ATTTGACTTCAGGACGAAACTATTT 57.254 32.000 0.00 0.00 31.71 1.40
539 552 7.745620 AATTTGACTTCAGGACGAAACTATT 57.254 32.000 0.00 0.00 31.71 1.73
540 553 7.745620 AAATTTGACTTCAGGACGAAACTAT 57.254 32.000 0.00 0.00 31.71 2.12
541 554 8.717821 CATAAATTTGACTTCAGGACGAAACTA 58.282 33.333 0.00 0.00 31.71 2.24
542 555 7.228706 ACATAAATTTGACTTCAGGACGAAACT 59.771 33.333 0.00 0.00 31.71 2.66
543 556 7.360361 ACATAAATTTGACTTCAGGACGAAAC 58.640 34.615 0.00 0.00 31.71 2.78
544 557 7.504924 ACATAAATTTGACTTCAGGACGAAA 57.495 32.000 0.00 0.00 31.71 3.46
545 558 7.504924 AACATAAATTTGACTTCAGGACGAA 57.495 32.000 0.00 0.00 0.00 3.85
546 559 7.504924 AAACATAAATTTGACTTCAGGACGA 57.495 32.000 0.00 0.00 0.00 4.20
547 560 8.574196 AAAAACATAAATTTGACTTCAGGACG 57.426 30.769 0.00 0.00 0.00 4.79
569 582 2.312390 GTAGTGGAAGTGGGGCAAAAA 58.688 47.619 0.00 0.00 0.00 1.94
570 583 1.215673 TGTAGTGGAAGTGGGGCAAAA 59.784 47.619 0.00 0.00 0.00 2.44
571 584 0.847373 TGTAGTGGAAGTGGGGCAAA 59.153 50.000 0.00 0.00 0.00 3.68
572 585 0.109723 GTGTAGTGGAAGTGGGGCAA 59.890 55.000 0.00 0.00 0.00 4.52
573 586 0.766674 AGTGTAGTGGAAGTGGGGCA 60.767 55.000 0.00 0.00 0.00 5.36
574 587 1.207329 CTAGTGTAGTGGAAGTGGGGC 59.793 57.143 0.00 0.00 0.00 5.80
575 588 1.831736 CCTAGTGTAGTGGAAGTGGGG 59.168 57.143 0.00 0.00 0.00 4.96
576 589 1.207329 GCCTAGTGTAGTGGAAGTGGG 59.793 57.143 0.00 0.00 0.00 4.61
577 590 1.899814 TGCCTAGTGTAGTGGAAGTGG 59.100 52.381 0.00 0.00 0.00 4.00
578 591 3.678056 TTGCCTAGTGTAGTGGAAGTG 57.322 47.619 0.00 0.00 0.00 3.16
579 592 3.557264 GCTTTGCCTAGTGTAGTGGAAGT 60.557 47.826 0.00 0.00 0.00 3.01
580 593 3.003480 GCTTTGCCTAGTGTAGTGGAAG 58.997 50.000 0.00 0.00 0.00 3.46
581 594 2.370519 TGCTTTGCCTAGTGTAGTGGAA 59.629 45.455 0.00 0.00 0.00 3.53
582 595 1.974957 TGCTTTGCCTAGTGTAGTGGA 59.025 47.619 0.00 0.00 0.00 4.02
583 596 2.472695 TGCTTTGCCTAGTGTAGTGG 57.527 50.000 0.00 0.00 0.00 4.00
599 612 0.105224 CTGCTCTGCTCTGCTATGCT 59.895 55.000 0.00 0.00 0.00 3.79
600 613 1.500512 GCTGCTCTGCTCTGCTATGC 61.501 60.000 0.00 0.00 0.00 3.14
601 614 0.179081 TGCTGCTCTGCTCTGCTATG 60.179 55.000 0.00 0.00 0.00 2.23
603 616 0.390866 GTTGCTGCTCTGCTCTGCTA 60.391 55.000 0.00 0.00 0.00 3.49
729 742 2.669950 GCGAGAAGAGAAGTGAGGACAC 60.670 54.545 0.00 0.00 46.24 3.67
757 770 1.615814 CGGGAGGAGGAGGAGAAGA 59.384 63.158 0.00 0.00 0.00 2.87
758 771 2.131067 GCGGGAGGAGGAGGAGAAG 61.131 68.421 0.00 0.00 0.00 2.85
759 772 2.042843 GCGGGAGGAGGAGGAGAA 60.043 66.667 0.00 0.00 0.00 2.87
760 773 4.144727 GGCGGGAGGAGGAGGAGA 62.145 72.222 0.00 0.00 0.00 3.71
823 836 3.119096 GCGGTGGAGGAAGCGAAC 61.119 66.667 0.00 0.00 43.52 3.95
873 886 1.160145 AGGGGAGGAACCGAGGAAA 59.840 57.895 0.00 0.00 40.11 3.13
886 899 1.380515 CTCTTCGGAGAGCAGGGGA 60.381 63.158 8.06 0.00 42.72 4.81
1404 1592 8.460428 TGAAACATTTTACGTTCCTAAAACTGT 58.540 29.630 0.00 0.00 30.26 3.55
1482 1674 4.584327 AATTGGAAAAAGGAAGACGTGG 57.416 40.909 0.00 0.00 0.00 4.94
1504 1696 9.836076 GAAAACGATACCTAAAGCAAACTTTAT 57.164 29.630 0.00 0.00 45.12 1.40
1507 1699 6.368213 CGAAAACGATACCTAAAGCAAACTT 58.632 36.000 0.00 0.00 37.90 2.66
1508 1700 5.616204 GCGAAAACGATACCTAAAGCAAACT 60.616 40.000 0.00 0.00 0.00 2.66
1509 1701 4.552276 GCGAAAACGATACCTAAAGCAAAC 59.448 41.667 0.00 0.00 0.00 2.93
1510 1702 4.667161 CGCGAAAACGATACCTAAAGCAAA 60.667 41.667 0.00 0.00 34.06 3.68
1511 1703 3.181528 CGCGAAAACGATACCTAAAGCAA 60.182 43.478 0.00 0.00 34.06 3.91
1512 1704 2.346244 CGCGAAAACGATACCTAAAGCA 59.654 45.455 0.00 0.00 34.06 3.91
1513 1705 2.599973 TCGCGAAAACGATACCTAAAGC 59.400 45.455 6.20 0.00 37.09 3.51
1514 1706 4.560035 TCTTCGCGAAAACGATACCTAAAG 59.440 41.667 23.54 5.66 42.54 1.85
1515 1707 4.484236 TCTTCGCGAAAACGATACCTAAA 58.516 39.130 23.54 0.00 42.54 1.85
1516 1708 4.095410 TCTTCGCGAAAACGATACCTAA 57.905 40.909 23.54 0.00 42.54 2.69
1517 1709 3.763097 TCTTCGCGAAAACGATACCTA 57.237 42.857 23.54 0.00 42.54 3.08
1518 1710 2.642139 TCTTCGCGAAAACGATACCT 57.358 45.000 23.54 0.00 42.54 3.08
1519 1711 3.122445 ACTTTCTTCGCGAAAACGATACC 59.878 43.478 23.54 0.00 42.54 2.73
1520 1712 4.303586 ACTTTCTTCGCGAAAACGATAC 57.696 40.909 23.54 0.00 42.54 2.24
1542 1734 4.026393 CGTGTCGTGTATCTGTTTGAACAA 60.026 41.667 0.00 0.00 38.66 2.83
1543 1735 3.487942 CGTGTCGTGTATCTGTTTGAACA 59.512 43.478 0.00 0.00 37.37 3.18
1564 1765 8.610855 TTACTTAGTCGTGTCATAGATTTTCG 57.389 34.615 0.00 0.00 0.00 3.46
1568 1769 9.737427 CTCATTTACTTAGTCGTGTCATAGATT 57.263 33.333 0.00 0.00 0.00 2.40
1595 1796 3.772619 GCCGTCCTACAATGGCTAA 57.227 52.632 0.00 0.00 46.06 3.09
1599 1800 1.082117 GTGACGCCGTCCTACAATGG 61.082 60.000 15.60 0.00 0.00 3.16
1600 1801 0.108804 AGTGACGCCGTCCTACAATG 60.109 55.000 15.60 0.00 0.00 2.82
1601 1802 0.606604 AAGTGACGCCGTCCTACAAT 59.393 50.000 15.60 0.00 0.00 2.71
1604 1805 1.068333 TGTAAAGTGACGCCGTCCTAC 60.068 52.381 15.60 7.21 0.00 3.18
1648 1894 4.707563 CAACGATACAAGTTCAAATGCGA 58.292 39.130 0.00 0.00 0.00 5.10
1659 1905 1.014825 CGCGACGCAACGATACAAG 60.015 57.895 21.35 0.00 35.09 3.16
1731 2015 5.199424 ACGTTACAGCATTTATTGTCGAC 57.801 39.130 9.11 9.11 0.00 4.20
1763 2047 2.096819 ACGAGCAAACATGAAACGTGTT 59.903 40.909 0.00 3.89 41.28 3.32
1767 2051 2.661504 TCACGAGCAAACATGAAACG 57.338 45.000 0.00 0.00 0.00 3.60
1801 2087 2.347150 TGTTATGCAGCATCGTACGTTG 59.653 45.455 19.55 19.55 0.00 4.10
1828 2114 0.887933 GGCAGCATCTTCCCGAAAAA 59.112 50.000 0.00 0.00 0.00 1.94
1829 2115 0.038166 AGGCAGCATCTTCCCGAAAA 59.962 50.000 0.00 0.00 0.00 2.29
1830 2116 0.908910 TAGGCAGCATCTTCCCGAAA 59.091 50.000 0.00 0.00 0.00 3.46
1831 2117 0.908910 TTAGGCAGCATCTTCCCGAA 59.091 50.000 0.00 0.00 0.00 4.30
1832 2118 0.178068 GTTAGGCAGCATCTTCCCGA 59.822 55.000 0.00 0.00 0.00 5.14
1833 2119 0.107703 TGTTAGGCAGCATCTTCCCG 60.108 55.000 0.00 0.00 0.00 5.14
1834 2120 2.355010 ATGTTAGGCAGCATCTTCCC 57.645 50.000 0.00 0.00 0.00 3.97
1835 2121 2.360165 CCAATGTTAGGCAGCATCTTCC 59.640 50.000 0.00 0.00 0.00 3.46
1836 2122 3.705043 CCAATGTTAGGCAGCATCTTC 57.295 47.619 0.00 0.00 0.00 2.87
1882 2201 3.565482 ACTGTTATGTGTTCAAGTGCAGG 59.435 43.478 0.00 0.00 0.00 4.85
1922 2529 9.436957 TTCTGACATGATTTCTAGTTTTCTACC 57.563 33.333 0.00 0.00 0.00 3.18
1928 2535 8.908786 TCAGTTTCTGACATGATTTCTAGTTT 57.091 30.769 0.00 0.00 35.39 2.66
1929 2536 8.153550 ACTCAGTTTCTGACATGATTTCTAGTT 58.846 33.333 0.00 0.00 35.39 2.24
1930 2537 7.675062 ACTCAGTTTCTGACATGATTTCTAGT 58.325 34.615 0.00 0.00 35.39 2.57
1931 2538 8.545229 AACTCAGTTTCTGACATGATTTCTAG 57.455 34.615 0.00 0.00 35.39 2.43
1932 2539 8.150296 TGAACTCAGTTTCTGACATGATTTCTA 58.850 33.333 0.00 3.36 35.39 2.10
1933 2540 6.994496 TGAACTCAGTTTCTGACATGATTTCT 59.006 34.615 0.00 0.00 35.39 2.52
1934 2541 7.194607 TGAACTCAGTTTCTGACATGATTTC 57.805 36.000 0.00 8.11 35.39 2.17
1935 2542 7.572523 TTGAACTCAGTTTCTGACATGATTT 57.427 32.000 0.00 0.00 35.39 2.17
1936 2543 7.572523 TTTGAACTCAGTTTCTGACATGATT 57.427 32.000 0.00 0.00 35.39 2.57
1955 2562 7.048000 GCATTCTGCGACATAAAATTTTGAA 57.952 32.000 13.76 6.16 31.71 2.69
2046 2653 1.079127 CACGCTTGTGTAGGAGGGG 60.079 63.158 0.00 0.00 38.84 4.79
2337 2944 3.474570 ATGGTGGCGAGGCTCTCC 61.475 66.667 16.64 16.64 0.00 3.71
2643 3250 1.487976 TGGCACTTCATCTCCTCCATC 59.512 52.381 0.00 0.00 0.00 3.51
2677 3284 3.181397 GCAAACGGATGGATTCACATTG 58.819 45.455 0.00 0.00 0.00 2.82
2682 3289 0.810648 GCTGCAAACGGATGGATTCA 59.189 50.000 0.00 0.00 0.00 2.57
2777 3384 6.223120 TGTAAATGGTATGATCTCCATGACG 58.777 40.000 14.78 0.00 42.73 4.35
2781 3388 8.821686 TTTGTTGTAAATGGTATGATCTCCAT 57.178 30.769 10.35 10.35 45.06 3.41
2804 3411 1.676006 CGCTCTGAAAACCACACCTTT 59.324 47.619 0.00 0.00 0.00 3.11
2871 3480 0.859232 GTCGTCGTCAACAAGCACAT 59.141 50.000 0.00 0.00 0.00 3.21
2946 3555 8.747538 TTGACTCATGATCTTCATTGATTGAT 57.252 30.769 0.00 3.33 34.28 2.57
2947 3556 8.621286 CATTGACTCATGATCTTCATTGATTGA 58.379 33.333 13.57 0.00 34.28 2.57
2948 3557 8.621286 TCATTGACTCATGATCTTCATTGATTG 58.379 33.333 15.70 6.49 34.28 2.67
3034 3689 0.318022 TGCAACGTGAGCAAAGCATG 60.318 50.000 12.89 0.00 39.39 4.06
3071 3726 4.612939 GCTCGTGTTTACAAGGGAATTCAC 60.613 45.833 7.93 3.01 0.00 3.18
3082 3737 1.272784 CTGTCGCGCTCGTGTTTACA 61.273 55.000 5.56 0.00 36.96 2.41
3132 3787 1.153469 GCCACTGAGAGCTACCAGC 60.153 63.158 13.09 0.00 42.84 4.85
3163 3818 1.318576 AGTCCGTTTTTGCCCTCTTG 58.681 50.000 0.00 0.00 0.00 3.02
3181 3836 3.182967 CAAGTGCTCCGTAGAAAGCTAG 58.817 50.000 0.00 0.00 37.10 3.42
3226 3883 2.359850 TGGCGCAGGATTCCACAC 60.360 61.111 10.83 0.00 0.00 3.82
3280 3937 3.132289 TGGAATCGGAATCTACACCTGTC 59.868 47.826 0.00 0.00 0.00 3.51
3309 3966 3.250762 CCTCAAACTCAAATCAGCGTGAA 59.749 43.478 0.00 0.00 0.00 3.18
3324 3981 1.295746 GGAGACCGGGACCTCAAAC 59.704 63.158 18.28 2.75 0.00 2.93
3325 3982 1.916777 GGGAGACCGGGACCTCAAA 60.917 63.158 18.28 0.00 43.64 2.69
3368 4029 2.573941 AACTGCGTCGTTCTATACCC 57.426 50.000 0.00 0.00 0.00 3.69
3422 5401 1.713647 TCTCCTTCTCTGTCCCTGTCT 59.286 52.381 0.00 0.00 0.00 3.41
3423 5402 2.223803 TCTCCTTCTCTGTCCCTGTC 57.776 55.000 0.00 0.00 0.00 3.51
3424 5403 2.704190 TTCTCCTTCTCTGTCCCTGT 57.296 50.000 0.00 0.00 0.00 4.00
3425 5404 2.235898 CCTTTCTCCTTCTCTGTCCCTG 59.764 54.545 0.00 0.00 0.00 4.45
3426 5405 2.545810 CCTTTCTCCTTCTCTGTCCCT 58.454 52.381 0.00 0.00 0.00 4.20
3429 5410 2.541466 TCCCCTTTCTCCTTCTCTGTC 58.459 52.381 0.00 0.00 0.00 3.51
3460 5441 7.254522 GGTGTTTCAACAGTGAACGAAATACTA 60.255 37.037 20.71 6.35 43.52 1.82
3527 5552 1.644786 AATTTGCAGGTCGCCGTAGC 61.645 55.000 0.00 0.00 41.33 3.58
3528 5553 0.802494 AAATTTGCAGGTCGCCGTAG 59.198 50.000 0.00 0.00 41.33 3.51
3529 5554 0.519519 CAAATTTGCAGGTCGCCGTA 59.480 50.000 5.01 0.00 41.33 4.02
3530 5555 1.285641 CAAATTTGCAGGTCGCCGT 59.714 52.632 5.01 0.00 41.33 5.68
3531 5556 4.151417 CAAATTTGCAGGTCGCCG 57.849 55.556 5.01 0.00 41.33 6.46
3540 5565 4.142381 GGATATATCCCGGAGCAAATTTGC 60.142 45.833 31.36 31.36 46.50 3.68
3541 5566 4.094887 CGGATATATCCCGGAGCAAATTTG 59.905 45.833 23.44 14.03 44.24 2.32
3542 5567 4.261801 CGGATATATCCCGGAGCAAATTT 58.738 43.478 23.44 0.00 44.24 1.82
3543 5568 3.873910 CGGATATATCCCGGAGCAAATT 58.126 45.455 23.44 0.00 44.24 1.82
3544 5569 2.420129 GCGGATATATCCCGGAGCAAAT 60.420 50.000 23.44 0.00 46.55 2.32
3545 5570 1.066430 GCGGATATATCCCGGAGCAAA 60.066 52.381 23.44 0.00 46.55 3.68
3546 5571 0.535335 GCGGATATATCCCGGAGCAA 59.465 55.000 23.44 0.00 46.55 3.91
3547 5572 1.663379 CGCGGATATATCCCGGAGCA 61.663 60.000 23.44 0.00 46.55 4.26
3548 5573 1.065928 CGCGGATATATCCCGGAGC 59.934 63.158 23.44 19.17 46.55 4.70
3553 5578 1.405821 CTCTGTCCGCGGATATATCCC 59.594 57.143 33.58 17.12 44.24 3.85
3554 5579 1.405821 CCTCTGTCCGCGGATATATCC 59.594 57.143 33.58 20.32 43.65 2.59
3555 5580 2.366533 TCCTCTGTCCGCGGATATATC 58.633 52.381 33.58 18.74 0.00 1.63
3556 5581 2.509166 TCCTCTGTCCGCGGATATAT 57.491 50.000 33.58 0.00 0.00 0.86
3557 5582 2.290705 TGATCCTCTGTCCGCGGATATA 60.291 50.000 33.58 20.53 37.66 0.86
3558 5583 1.178276 GATCCTCTGTCCGCGGATAT 58.822 55.000 33.58 13.50 37.66 1.63
3559 5584 0.179001 TGATCCTCTGTCCGCGGATA 60.179 55.000 33.58 28.44 37.66 2.59
3560 5585 1.455773 TGATCCTCTGTCCGCGGAT 60.456 57.895 33.58 13.94 40.13 4.18
3561 5586 2.044352 TGATCCTCTGTCCGCGGA 60.044 61.111 27.28 27.28 0.00 5.54
3562 5587 1.949847 AACTGATCCTCTGTCCGCGG 61.950 60.000 22.12 22.12 0.00 6.46
3563 5588 0.526524 GAACTGATCCTCTGTCCGCG 60.527 60.000 0.00 0.00 0.00 6.46
3564 5589 0.526524 CGAACTGATCCTCTGTCCGC 60.527 60.000 0.00 0.00 0.00 5.54
3565 5590 0.811915 ACGAACTGATCCTCTGTCCG 59.188 55.000 0.00 0.00 32.83 4.79
3566 5591 1.134965 CCACGAACTGATCCTCTGTCC 60.135 57.143 0.00 0.00 0.00 4.02
3567 5592 1.819288 TCCACGAACTGATCCTCTGTC 59.181 52.381 0.00 0.00 0.00 3.51
3568 5593 1.546476 GTCCACGAACTGATCCTCTGT 59.454 52.381 0.00 0.00 0.00 3.41
3569 5594 1.468224 CGTCCACGAACTGATCCTCTG 60.468 57.143 0.00 0.00 43.02 3.35
3570 5595 0.811915 CGTCCACGAACTGATCCTCT 59.188 55.000 0.00 0.00 43.02 3.69
3571 5596 0.802607 GCGTCCACGAACTGATCCTC 60.803 60.000 2.58 0.00 43.02 3.71
3572 5597 1.215647 GCGTCCACGAACTGATCCT 59.784 57.895 2.58 0.00 43.02 3.24
3573 5598 1.078759 CAGCGTCCACGAACTGATCC 61.079 60.000 2.58 0.00 43.02 3.36
3574 5599 0.109272 TCAGCGTCCACGAACTGATC 60.109 55.000 2.58 0.00 43.02 2.92
3575 5600 0.532573 ATCAGCGTCCACGAACTGAT 59.467 50.000 13.36 13.36 41.19 2.90
3576 5601 0.317160 AATCAGCGTCCACGAACTGA 59.683 50.000 2.58 7.52 40.68 3.41
3577 5602 1.126846 GAAATCAGCGTCCACGAACTG 59.873 52.381 2.58 1.97 43.02 3.16
3578 5603 1.270094 TGAAATCAGCGTCCACGAACT 60.270 47.619 2.58 0.00 43.02 3.01
3579 5604 1.144969 TGAAATCAGCGTCCACGAAC 58.855 50.000 2.58 0.00 43.02 3.95
3580 5605 1.872388 TTGAAATCAGCGTCCACGAA 58.128 45.000 2.58 0.00 43.02 3.85
3581 5606 1.529438 GTTTGAAATCAGCGTCCACGA 59.471 47.619 2.58 0.00 43.02 4.35
3582 5607 1.262950 TGTTTGAAATCAGCGTCCACG 59.737 47.619 0.00 0.00 43.27 4.94
3583 5608 2.290641 AGTGTTTGAAATCAGCGTCCAC 59.709 45.455 0.00 0.00 0.00 4.02
3584 5609 2.548057 GAGTGTTTGAAATCAGCGTCCA 59.452 45.455 0.00 0.00 0.00 4.02
3585 5610 2.808543 AGAGTGTTTGAAATCAGCGTCC 59.191 45.455 0.00 0.00 0.00 4.79
3586 5611 4.474226 AAGAGTGTTTGAAATCAGCGTC 57.526 40.909 0.00 0.00 0.00 5.19
3587 5612 4.900635 AAAGAGTGTTTGAAATCAGCGT 57.099 36.364 0.00 0.00 0.00 5.07
3588 5613 6.690957 TGTTAAAAGAGTGTTTGAAATCAGCG 59.309 34.615 0.00 0.00 0.00 5.18
3589 5614 7.985634 TGTTAAAAGAGTGTTTGAAATCAGC 57.014 32.000 0.00 0.00 0.00 4.26
3591 5616 9.145865 GGTTTGTTAAAAGAGTGTTTGAAATCA 57.854 29.630 0.00 0.00 0.00 2.57
3592 5617 8.318167 CGGTTTGTTAAAAGAGTGTTTGAAATC 58.682 33.333 0.00 0.00 0.00 2.17
3593 5618 8.030106 TCGGTTTGTTAAAAGAGTGTTTGAAAT 58.970 29.630 0.00 0.00 0.00 2.17
3594 5619 7.368833 TCGGTTTGTTAAAAGAGTGTTTGAAA 58.631 30.769 0.00 0.00 0.00 2.69
3595 5620 6.910995 TCGGTTTGTTAAAAGAGTGTTTGAA 58.089 32.000 0.00 0.00 0.00 2.69
3596 5621 6.497785 TCGGTTTGTTAAAAGAGTGTTTGA 57.502 33.333 0.00 0.00 0.00 2.69
3597 5622 7.486551 TCATTCGGTTTGTTAAAAGAGTGTTTG 59.513 33.333 0.00 0.00 0.00 2.93
3598 5623 7.540299 TCATTCGGTTTGTTAAAAGAGTGTTT 58.460 30.769 0.00 0.00 0.00 2.83
3599 5624 7.090953 TCATTCGGTTTGTTAAAAGAGTGTT 57.909 32.000 0.00 0.00 0.00 3.32
3600 5625 6.687081 TCATTCGGTTTGTTAAAAGAGTGT 57.313 33.333 0.00 0.00 0.00 3.55
3601 5626 7.979115 TTTCATTCGGTTTGTTAAAAGAGTG 57.021 32.000 0.00 0.00 0.00 3.51
3602 5627 9.244799 GAATTTCATTCGGTTTGTTAAAAGAGT 57.755 29.630 0.00 0.00 0.00 3.24
3603 5628 9.243637 TGAATTTCATTCGGTTTGTTAAAAGAG 57.756 29.630 0.00 0.00 42.15 2.85
3604 5629 9.757227 ATGAATTTCATTCGGTTTGTTAAAAGA 57.243 25.926 6.06 0.00 42.15 2.52
3605 5630 9.796062 CATGAATTTCATTCGGTTTGTTAAAAG 57.204 29.630 9.19 0.00 42.15 2.27
3606 5631 8.279103 GCATGAATTTCATTCGGTTTGTTAAAA 58.721 29.630 9.19 0.00 42.15 1.52
3607 5632 7.439356 TGCATGAATTTCATTCGGTTTGTTAAA 59.561 29.630 9.19 0.00 42.15 1.52
3608 5633 6.925718 TGCATGAATTTCATTCGGTTTGTTAA 59.074 30.769 9.19 0.00 42.15 2.01
3609 5634 6.450545 TGCATGAATTTCATTCGGTTTGTTA 58.549 32.000 9.19 0.00 42.15 2.41
3610 5635 5.295950 TGCATGAATTTCATTCGGTTTGTT 58.704 33.333 9.19 0.00 42.15 2.83
3611 5636 4.880759 TGCATGAATTTCATTCGGTTTGT 58.119 34.783 9.19 0.00 42.15 2.83
3612 5637 5.842619 TTGCATGAATTTCATTCGGTTTG 57.157 34.783 9.19 0.00 42.15 2.93
3613 5638 5.757320 TGTTTGCATGAATTTCATTCGGTTT 59.243 32.000 9.19 0.00 42.15 3.27
3614 5639 5.177327 GTGTTTGCATGAATTTCATTCGGTT 59.823 36.000 9.19 0.00 42.15 4.44
3615 5640 4.685628 GTGTTTGCATGAATTTCATTCGGT 59.314 37.500 9.19 0.00 42.15 4.69
3616 5641 4.685165 TGTGTTTGCATGAATTTCATTCGG 59.315 37.500 9.19 0.52 42.15 4.30
3617 5642 5.825905 TGTGTTTGCATGAATTTCATTCG 57.174 34.783 9.19 1.21 42.15 3.34
3618 5643 6.946165 TGTTGTGTTTGCATGAATTTCATTC 58.054 32.000 9.19 5.66 34.28 2.67
3619 5644 6.762187 TCTGTTGTGTTTGCATGAATTTCATT 59.238 30.769 9.19 0.00 34.28 2.57
3620 5645 6.282167 TCTGTTGTGTTTGCATGAATTTCAT 58.718 32.000 6.06 6.06 37.65 2.57
3621 5646 5.658468 TCTGTTGTGTTTGCATGAATTTCA 58.342 33.333 0.75 0.75 0.00 2.69
3622 5647 6.774354 ATCTGTTGTGTTTGCATGAATTTC 57.226 33.333 0.00 0.00 0.00 2.17
3623 5648 8.089597 TGATATCTGTTGTGTTTGCATGAATTT 58.910 29.630 3.98 0.00 0.00 1.82
3624 5649 7.604549 TGATATCTGTTGTGTTTGCATGAATT 58.395 30.769 3.98 0.00 0.00 2.17
3625 5650 7.160547 TGATATCTGTTGTGTTTGCATGAAT 57.839 32.000 3.98 0.00 0.00 2.57
3626 5651 6.572167 TGATATCTGTTGTGTTTGCATGAA 57.428 33.333 3.98 0.00 0.00 2.57
3627 5652 6.762702 ATGATATCTGTTGTGTTTGCATGA 57.237 33.333 3.98 0.00 0.00 3.07
3628 5653 7.700505 AGTATGATATCTGTTGTGTTTGCATG 58.299 34.615 3.98 0.00 0.00 4.06
3629 5654 7.870509 AGTATGATATCTGTTGTGTTTGCAT 57.129 32.000 3.98 0.00 0.00 3.96
3630 5655 8.664798 GTTAGTATGATATCTGTTGTGTTTGCA 58.335 33.333 3.98 0.00 0.00 4.08
3631 5656 8.122952 GGTTAGTATGATATCTGTTGTGTTTGC 58.877 37.037 3.98 0.00 0.00 3.68
3632 5657 8.328146 CGGTTAGTATGATATCTGTTGTGTTTG 58.672 37.037 3.98 0.00 0.00 2.93
3633 5658 8.255206 TCGGTTAGTATGATATCTGTTGTGTTT 58.745 33.333 3.98 0.00 0.00 2.83
3634 5659 7.778083 TCGGTTAGTATGATATCTGTTGTGTT 58.222 34.615 3.98 0.00 0.00 3.32
3635 5660 7.342769 TCGGTTAGTATGATATCTGTTGTGT 57.657 36.000 3.98 0.00 0.00 3.72
3636 5661 7.704899 TGTTCGGTTAGTATGATATCTGTTGTG 59.295 37.037 3.98 0.00 0.00 3.33
3637 5662 7.778083 TGTTCGGTTAGTATGATATCTGTTGT 58.222 34.615 3.98 0.00 0.00 3.32
3638 5663 8.642908 TTGTTCGGTTAGTATGATATCTGTTG 57.357 34.615 3.98 0.00 0.00 3.33
3639 5664 9.661563 TTTTGTTCGGTTAGTATGATATCTGTT 57.338 29.630 3.98 0.00 0.00 3.16
3640 5665 9.095065 GTTTTGTTCGGTTAGTATGATATCTGT 57.905 33.333 3.98 0.00 0.00 3.41
3641 5666 8.266682 CGTTTTGTTCGGTTAGTATGATATCTG 58.733 37.037 3.98 0.00 0.00 2.90
3642 5667 7.977853 ACGTTTTGTTCGGTTAGTATGATATCT 59.022 33.333 3.98 0.00 0.00 1.98
3643 5668 8.123445 ACGTTTTGTTCGGTTAGTATGATATC 57.877 34.615 0.00 0.00 0.00 1.63
3644 5669 8.483307 AACGTTTTGTTCGGTTAGTATGATAT 57.517 30.769 0.00 0.00 35.27 1.63
3645 5670 7.887996 AACGTTTTGTTCGGTTAGTATGATA 57.112 32.000 0.00 0.00 35.27 2.15
3646 5671 6.790285 AACGTTTTGTTCGGTTAGTATGAT 57.210 33.333 0.00 0.00 35.27 2.45
3647 5672 6.601741 AAACGTTTTGTTCGGTTAGTATGA 57.398 33.333 7.96 0.00 40.84 2.15
3651 5676 9.949174 AAAATATAAACGTTTTGTTCGGTTAGT 57.051 25.926 20.19 0.00 42.28 2.24
3655 5680 9.597999 GTCTAAAATATAAACGTTTTGTTCGGT 57.402 29.630 20.19 2.71 40.84 4.69
3656 5681 9.596677 TGTCTAAAATATAAACGTTTTGTTCGG 57.403 29.630 20.19 3.91 40.84 4.30
3696 5721 9.884636 GAAACCCAATTTGCTTTATTATTAGGT 57.115 29.630 0.00 0.00 0.00 3.08
3701 5726 9.150348 CGAAAGAAACCCAATTTGCTTTATTAT 57.850 29.630 0.00 0.00 32.50 1.28
3702 5727 8.145122 ACGAAAGAAACCCAATTTGCTTTATTA 58.855 29.630 0.00 0.00 32.50 0.98
3703 5728 6.989759 ACGAAAGAAACCCAATTTGCTTTATT 59.010 30.769 0.00 0.00 32.50 1.40
3704 5729 6.521162 ACGAAAGAAACCCAATTTGCTTTAT 58.479 32.000 0.00 0.00 32.50 1.40
3705 5730 5.908341 ACGAAAGAAACCCAATTTGCTTTA 58.092 33.333 0.00 0.00 32.50 1.85
3706 5731 4.765273 ACGAAAGAAACCCAATTTGCTTT 58.235 34.783 0.00 0.00 33.79 3.51
3707 5732 4.368315 GACGAAAGAAACCCAATTTGCTT 58.632 39.130 0.00 0.00 0.00 3.91
3708 5733 3.243737 GGACGAAAGAAACCCAATTTGCT 60.244 43.478 0.00 0.00 0.00 3.91
3709 5734 3.057019 GGACGAAAGAAACCCAATTTGC 58.943 45.455 0.00 0.00 0.00 3.68
3710 5735 3.243267 ACGGACGAAAGAAACCCAATTTG 60.243 43.478 0.00 0.00 0.00 2.32
3711 5736 2.953648 ACGGACGAAAGAAACCCAATTT 59.046 40.909 0.00 0.00 0.00 1.82
3712 5737 2.551032 GACGGACGAAAGAAACCCAATT 59.449 45.455 0.00 0.00 0.00 2.32
3713 5738 2.148768 GACGGACGAAAGAAACCCAAT 58.851 47.619 0.00 0.00 0.00 3.16
3714 5739 1.134461 TGACGGACGAAAGAAACCCAA 60.134 47.619 0.00 0.00 0.00 4.12
3715 5740 0.464870 TGACGGACGAAAGAAACCCA 59.535 50.000 0.00 0.00 0.00 4.51
3716 5741 1.463444 CATGACGGACGAAAGAAACCC 59.537 52.381 0.00 0.00 0.00 4.11
3717 5742 2.157085 GTCATGACGGACGAAAGAAACC 59.843 50.000 10.69 0.00 0.00 3.27
3718 5743 2.798283 TGTCATGACGGACGAAAGAAAC 59.202 45.455 20.54 0.00 40.72 2.78
3719 5744 3.100658 TGTCATGACGGACGAAAGAAA 57.899 42.857 20.54 0.00 40.72 2.52
3720 5745 2.804697 TGTCATGACGGACGAAAGAA 57.195 45.000 20.54 0.00 40.72 2.52
3721 5746 3.313012 AATGTCATGACGGACGAAAGA 57.687 42.857 20.54 0.20 40.72 2.52
3722 5747 4.404507 AAAATGTCATGACGGACGAAAG 57.595 40.909 20.54 0.00 40.72 2.62
3723 5748 4.273724 TGAAAAATGTCATGACGGACGAAA 59.726 37.500 20.54 1.72 40.72 3.46
3724 5749 3.810386 TGAAAAATGTCATGACGGACGAA 59.190 39.130 20.54 2.48 40.72 3.85
3725 5750 3.394719 TGAAAAATGTCATGACGGACGA 58.605 40.909 20.54 3.25 40.72 4.20
3726 5751 3.431912 TCTGAAAAATGTCATGACGGACG 59.568 43.478 20.54 4.31 40.72 4.79
3727 5752 5.356882 TTCTGAAAAATGTCATGACGGAC 57.643 39.130 20.54 9.24 38.29 4.79
3728 5753 6.039270 ACTTTTCTGAAAAATGTCATGACGGA 59.961 34.615 20.54 4.80 34.00 4.69
3729 5754 6.208644 ACTTTTCTGAAAAATGTCATGACGG 58.791 36.000 20.54 0.63 34.00 4.79
3730 5755 7.134815 AGACTTTTCTGAAAAATGTCATGACG 58.865 34.615 24.78 11.46 36.29 4.35
3731 5756 8.348507 AGAGACTTTTCTGAAAAATGTCATGAC 58.651 33.333 24.78 19.27 36.29 3.06
3732 5757 8.455903 AGAGACTTTTCTGAAAAATGTCATGA 57.544 30.769 24.78 0.00 36.29 3.07
3733 5758 8.566260 AGAGAGACTTTTCTGAAAAATGTCATG 58.434 33.333 24.78 13.02 36.29 3.07
3734 5759 8.688747 AGAGAGACTTTTCTGAAAAATGTCAT 57.311 30.769 24.78 17.55 36.29 3.06
3735 5760 9.784531 ATAGAGAGACTTTTCTGAAAAATGTCA 57.215 29.630 24.78 12.56 36.29 3.58
3757 5782 8.826765 ACTCCAGGTTAAATTCTCTGAAATAGA 58.173 33.333 0.00 0.00 0.00 1.98
3758 5783 9.103861 GACTCCAGGTTAAATTCTCTGAAATAG 57.896 37.037 0.00 0.00 0.00 1.73
3759 5784 8.047310 GGACTCCAGGTTAAATTCTCTGAAATA 58.953 37.037 0.00 0.00 0.00 1.40
3760 5785 6.887002 GGACTCCAGGTTAAATTCTCTGAAAT 59.113 38.462 0.00 0.00 0.00 2.17
3761 5786 6.044404 AGGACTCCAGGTTAAATTCTCTGAAA 59.956 38.462 0.00 0.00 0.00 2.69
3762 5787 5.548056 AGGACTCCAGGTTAAATTCTCTGAA 59.452 40.000 0.00 0.00 0.00 3.02
3763 5788 5.046304 CAGGACTCCAGGTTAAATTCTCTGA 60.046 44.000 0.00 0.00 0.00 3.27
3764 5789 5.181748 CAGGACTCCAGGTTAAATTCTCTG 58.818 45.833 0.00 0.00 0.00 3.35
3765 5790 4.846940 ACAGGACTCCAGGTTAAATTCTCT 59.153 41.667 0.00 0.00 0.00 3.10
3766 5791 5.167303 ACAGGACTCCAGGTTAAATTCTC 57.833 43.478 0.00 0.00 0.00 2.87
3767 5792 5.584551 AACAGGACTCCAGGTTAAATTCT 57.415 39.130 0.00 0.00 0.00 2.40
3768 5793 6.650427 AAAACAGGACTCCAGGTTAAATTC 57.350 37.500 0.00 0.00 0.00 2.17
3769 5794 7.783119 ACTTAAAACAGGACTCCAGGTTAAATT 59.217 33.333 0.00 0.00 0.00 1.82
3770 5795 7.295340 ACTTAAAACAGGACTCCAGGTTAAAT 58.705 34.615 0.00 0.00 0.00 1.40
3771 5796 6.665695 ACTTAAAACAGGACTCCAGGTTAAA 58.334 36.000 0.00 0.56 0.00 1.52
3772 5797 6.256643 ACTTAAAACAGGACTCCAGGTTAA 57.743 37.500 0.00 0.00 0.00 2.01
3773 5798 5.899631 ACTTAAAACAGGACTCCAGGTTA 57.100 39.130 0.00 0.00 0.00 2.85
3774 5799 4.790718 ACTTAAAACAGGACTCCAGGTT 57.209 40.909 0.00 0.00 0.00 3.50
3775 5800 4.790718 AACTTAAAACAGGACTCCAGGT 57.209 40.909 0.00 0.00 0.00 4.00
3776 5801 7.576861 TTTTAACTTAAAACAGGACTCCAGG 57.423 36.000 3.04 0.00 33.08 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.