Multiple sequence alignment - TraesCS3A01G144100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G144100 chr3A 100.000 3049 0 0 1 3049 125495025 125498073 0.000000e+00 5631.0
1 TraesCS3A01G144100 chr3A 79.885 348 56 7 2691 3025 500997611 500997957 3.040000e-60 243.0
2 TraesCS3A01G144100 chr3D 86.467 2505 133 92 292 2676 116407191 116409609 0.000000e+00 2558.0
3 TraesCS3A01G144100 chr3D 89.714 175 11 3 69 239 116407018 116407189 1.840000e-52 217.0
4 TraesCS3A01G144100 chr3B 87.910 1737 105 51 1018 2676 171600250 171601959 0.000000e+00 1947.0
5 TraesCS3A01G144100 chr3B 88.204 746 50 19 292 1019 171597448 171598173 0.000000e+00 856.0
6 TraesCS3A01G144100 chr3B 96.429 84 3 0 57 140 171597214 171597297 4.100000e-29 139.0
7 TraesCS3A01G144100 chr3B 87.500 80 10 0 154 233 171597361 171597440 3.240000e-15 93.5
8 TraesCS3A01G144100 chr7D 85.308 211 26 4 2817 3025 63971469 63971676 2.380000e-51 213.0
9 TraesCS3A01G144100 chr7B 77.457 346 62 11 2691 3025 106326399 106326739 3.100000e-45 193.0
10 TraesCS3A01G144100 chr4A 82.222 225 38 2 2802 3025 25041279 25041056 3.100000e-45 193.0
11 TraesCS3A01G144100 chr2A 77.711 332 58 10 2733 3049 381505079 381505409 4.010000e-44 189.0
12 TraesCS3A01G144100 chr2D 78.148 270 48 7 2762 3028 112913068 112912807 8.750000e-36 161.0
13 TraesCS3A01G144100 chr1D 78.244 262 46 6 2741 2991 139141463 139141202 1.130000e-34 158.0
14 TraesCS3A01G144100 chr5D 80.000 220 37 7 2709 2923 367647347 367647130 4.070000e-34 156.0
15 TraesCS3A01G144100 chr4B 86.885 122 15 1 2817 2937 500202153 500202274 5.300000e-28 135.0
16 TraesCS3A01G144100 chr2B 81.633 147 23 2 2824 2966 183663144 183663290 5.340000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G144100 chr3A 125495025 125498073 3048 False 5631.000 5631 100.00000 1 3049 1 chr3A.!!$F1 3048
1 TraesCS3A01G144100 chr3D 116407018 116409609 2591 False 1387.500 2558 88.09050 69 2676 2 chr3D.!!$F1 2607
2 TraesCS3A01G144100 chr3B 171597214 171601959 4745 False 758.875 1947 90.01075 57 2676 4 chr3B.!!$F1 2619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 225 0.040058 ACTGGGCATGGCAATTCTGA 59.96 50.0 22.06 0.0 0.00 3.27 F
242 294 0.040067 GCCAGCGCCAAATGCTATAC 60.04 55.0 2.29 0.0 41.72 1.47 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1672 3895 0.038526 TCCGTTCTCGCTGTTCTTCC 60.039 55.0 0.00 0.0 35.54 3.46 R
2171 4445 0.101399 TCGATCGCAAGCTTCCTCTC 59.899 55.0 11.09 0.0 37.18 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.431725 GCTTAAAGCAGGCGCGGT 61.432 61.111 8.83 0.00 45.49 5.68
18 19 2.480555 CTTAAAGCAGGCGCGGTG 59.519 61.111 8.83 2.01 45.49 4.94
19 20 3.667429 CTTAAAGCAGGCGCGGTGC 62.667 63.158 22.12 22.12 45.49 5.01
29 30 3.869272 CGCGGTGCAGCAAGGATC 61.869 66.667 17.33 0.00 36.85 3.36
30 31 2.747460 GCGGTGCAGCAAGGATCA 60.747 61.111 17.33 0.00 37.05 2.92
31 32 3.044059 GCGGTGCAGCAAGGATCAC 62.044 63.158 17.33 0.00 37.05 3.06
32 33 1.376424 CGGTGCAGCAAGGATCACT 60.376 57.895 17.33 0.00 0.00 3.41
33 34 1.642037 CGGTGCAGCAAGGATCACTG 61.642 60.000 17.33 0.00 34.48 3.66
34 35 1.310933 GGTGCAGCAAGGATCACTGG 61.311 60.000 11.86 0.00 31.94 4.00
35 36 0.607489 GTGCAGCAAGGATCACTGGT 60.607 55.000 0.00 0.00 31.94 4.00
36 37 0.983467 TGCAGCAAGGATCACTGGTA 59.017 50.000 0.00 0.00 31.94 3.25
37 38 1.350684 TGCAGCAAGGATCACTGGTAA 59.649 47.619 0.00 0.00 31.94 2.85
38 39 2.025981 TGCAGCAAGGATCACTGGTAAT 60.026 45.455 0.00 0.00 31.94 1.89
39 40 3.019564 GCAGCAAGGATCACTGGTAATT 58.980 45.455 0.00 0.00 31.94 1.40
40 41 3.445096 GCAGCAAGGATCACTGGTAATTT 59.555 43.478 0.00 0.00 31.94 1.82
41 42 4.082026 GCAGCAAGGATCACTGGTAATTTT 60.082 41.667 0.00 0.00 31.94 1.82
42 43 5.567423 GCAGCAAGGATCACTGGTAATTTTT 60.567 40.000 0.00 0.00 31.94 1.94
43 44 6.095377 CAGCAAGGATCACTGGTAATTTTTC 58.905 40.000 0.00 0.00 0.00 2.29
44 45 6.012745 AGCAAGGATCACTGGTAATTTTTCT 58.987 36.000 0.00 0.00 0.00 2.52
45 46 6.494835 AGCAAGGATCACTGGTAATTTTTCTT 59.505 34.615 0.00 0.00 0.00 2.52
46 47 6.808704 GCAAGGATCACTGGTAATTTTTCTTC 59.191 38.462 0.00 0.00 0.00 2.87
47 48 7.315890 CAAGGATCACTGGTAATTTTTCTTCC 58.684 38.462 0.00 0.00 0.00 3.46
48 49 6.794534 AGGATCACTGGTAATTTTTCTTCCT 58.205 36.000 0.00 0.00 0.00 3.36
49 50 7.241628 AGGATCACTGGTAATTTTTCTTCCTT 58.758 34.615 0.00 0.00 0.00 3.36
50 51 7.177392 AGGATCACTGGTAATTTTTCTTCCTTG 59.823 37.037 0.00 0.00 0.00 3.61
51 52 6.648879 TCACTGGTAATTTTTCTTCCTTGG 57.351 37.500 0.00 0.00 0.00 3.61
52 53 6.369629 TCACTGGTAATTTTTCTTCCTTGGA 58.630 36.000 0.00 0.00 0.00 3.53
53 54 6.836527 TCACTGGTAATTTTTCTTCCTTGGAA 59.163 34.615 1.86 1.86 0.00 3.53
54 55 7.343316 TCACTGGTAATTTTTCTTCCTTGGAAA 59.657 33.333 3.54 0.00 0.00 3.13
55 56 7.653311 CACTGGTAATTTTTCTTCCTTGGAAAG 59.347 37.037 3.54 0.00 45.69 2.62
56 57 6.521162 TGGTAATTTTTCTTCCTTGGAAAGC 58.479 36.000 3.54 0.00 44.44 3.51
57 58 6.326323 TGGTAATTTTTCTTCCTTGGAAAGCT 59.674 34.615 3.54 0.00 44.44 3.74
58 59 6.646653 GGTAATTTTTCTTCCTTGGAAAGCTG 59.353 38.462 3.54 0.00 44.44 4.24
59 60 3.733443 TTTTCTTCCTTGGAAAGCTGC 57.267 42.857 3.54 0.00 44.44 5.25
60 61 2.664402 TTCTTCCTTGGAAAGCTGCT 57.336 45.000 0.00 0.00 44.44 4.24
61 62 1.901591 TCTTCCTTGGAAAGCTGCTG 58.098 50.000 1.35 0.00 44.44 4.41
65 66 0.239347 CCTTGGAAAGCTGCTGTTCG 59.761 55.000 1.35 0.00 44.44 3.95
142 144 2.092319 AACTCGCAGCTGCAGACTGA 62.092 55.000 36.03 23.45 42.21 3.41
144 146 0.740164 CTCGCAGCTGCAGACTGATT 60.740 55.000 36.03 4.41 42.21 2.57
145 147 0.321034 TCGCAGCTGCAGACTGATTT 60.321 50.000 36.03 2.64 42.21 2.17
146 148 0.096628 CGCAGCTGCAGACTGATTTC 59.903 55.000 36.03 17.17 42.21 2.17
147 149 1.451067 GCAGCTGCAGACTGATTTCT 58.549 50.000 33.36 10.54 41.59 2.52
148 150 1.397692 GCAGCTGCAGACTGATTTCTC 59.602 52.381 33.36 14.82 41.59 2.87
150 152 1.627329 AGCTGCAGACTGATTTCTCCA 59.373 47.619 20.43 0.00 0.00 3.86
151 153 2.239150 AGCTGCAGACTGATTTCTCCAT 59.761 45.455 20.43 0.00 0.00 3.41
161 213 2.041485 TGATTTCTCCATCAACTGGGCA 59.959 45.455 0.00 0.00 45.98 5.36
171 223 0.899720 CAACTGGGCATGGCAATTCT 59.100 50.000 22.06 0.00 0.00 2.40
173 225 0.040058 ACTGGGCATGGCAATTCTGA 59.960 50.000 22.06 0.00 0.00 3.27
187 239 2.490328 TTCTGAAAGGCGCAAACTTG 57.510 45.000 10.83 0.00 0.00 3.16
191 243 1.680735 TGAAAGGCGCAAACTTGTCAT 59.319 42.857 10.83 0.00 0.00 3.06
195 247 0.179200 GGCGCAAACTTGTCATACCG 60.179 55.000 10.83 0.00 0.00 4.02
239 291 3.507924 CGCCAGCGCCAAATGCTA 61.508 61.111 2.29 0.00 41.72 3.49
240 292 2.837883 CGCCAGCGCCAAATGCTAT 61.838 57.895 2.29 0.00 41.72 2.97
241 293 1.506309 CGCCAGCGCCAAATGCTATA 61.506 55.000 2.29 0.00 41.72 1.31
242 294 0.040067 GCCAGCGCCAAATGCTATAC 60.040 55.000 2.29 0.00 41.72 1.47
243 295 0.235665 CCAGCGCCAAATGCTATACG 59.764 55.000 2.29 0.00 41.72 3.06
244 296 0.937304 CAGCGCCAAATGCTATACGT 59.063 50.000 2.29 0.00 41.72 3.57
245 297 2.131972 CAGCGCCAAATGCTATACGTA 58.868 47.619 2.29 0.00 41.72 3.57
246 298 2.736721 CAGCGCCAAATGCTATACGTAT 59.263 45.455 13.54 13.54 41.72 3.06
247 299 2.993899 AGCGCCAAATGCTATACGTATC 59.006 45.455 12.24 0.00 41.87 2.24
248 300 2.993899 GCGCCAAATGCTATACGTATCT 59.006 45.455 12.24 0.00 38.05 1.98
249 301 4.082408 AGCGCCAAATGCTATACGTATCTA 60.082 41.667 12.24 0.00 41.87 1.98
250 302 4.265556 GCGCCAAATGCTATACGTATCTAG 59.734 45.833 12.24 6.16 38.05 2.43
251 303 5.637809 CGCCAAATGCTATACGTATCTAGA 58.362 41.667 12.24 0.00 38.05 2.43
252 304 5.512082 CGCCAAATGCTATACGTATCTAGAC 59.488 44.000 12.24 2.65 38.05 2.59
253 305 6.387465 GCCAAATGCTATACGTATCTAGACA 58.613 40.000 12.24 7.90 36.87 3.41
254 306 6.866770 GCCAAATGCTATACGTATCTAGACAA 59.133 38.462 12.24 0.00 36.87 3.18
255 307 7.148787 GCCAAATGCTATACGTATCTAGACAAC 60.149 40.741 12.24 0.00 36.87 3.32
256 308 7.865889 CCAAATGCTATACGTATCTAGACAACA 59.134 37.037 12.24 0.00 0.00 3.33
257 309 9.244799 CAAATGCTATACGTATCTAGACAACAA 57.755 33.333 12.24 0.00 0.00 2.83
258 310 9.811995 AAATGCTATACGTATCTAGACAACAAA 57.188 29.630 12.24 0.00 0.00 2.83
259 311 9.982651 AATGCTATACGTATCTAGACAACAAAT 57.017 29.630 12.24 0.00 0.00 2.32
260 312 8.797266 TGCTATACGTATCTAGACAACAAATG 57.203 34.615 12.24 0.00 0.00 2.32
262 314 9.888878 GCTATACGTATCTAGACAACAAATGTA 57.111 33.333 12.24 0.00 44.12 2.29
266 318 8.684973 ACGTATCTAGACAACAAATGTAAGAC 57.315 34.615 0.00 0.00 44.12 3.01
267 319 8.301720 ACGTATCTAGACAACAAATGTAAGACA 58.698 33.333 0.00 0.00 44.12 3.41
268 320 9.135843 CGTATCTAGACAACAAATGTAAGACAA 57.864 33.333 0.00 0.00 44.12 3.18
281 333 9.318041 CAAATGTAAGACAAGTAATTTGAGACG 57.682 33.333 0.00 0.00 39.21 4.18
282 334 7.596749 ATGTAAGACAAGTAATTTGAGACGG 57.403 36.000 0.00 0.00 39.21 4.79
283 335 6.751157 TGTAAGACAAGTAATTTGAGACGGA 58.249 36.000 0.00 0.00 39.21 4.69
284 336 7.383687 TGTAAGACAAGTAATTTGAGACGGAT 58.616 34.615 0.00 0.00 39.21 4.18
285 337 6.727824 AAGACAAGTAATTTGAGACGGATG 57.272 37.500 0.00 0.00 39.21 3.51
286 338 5.794894 AGACAAGTAATTTGAGACGGATGT 58.205 37.500 0.00 0.00 39.21 3.06
287 339 6.931838 AGACAAGTAATTTGAGACGGATGTA 58.068 36.000 0.00 0.00 39.21 2.29
288 340 7.383687 AGACAAGTAATTTGAGACGGATGTAA 58.616 34.615 0.00 0.00 39.21 2.41
289 341 8.041323 AGACAAGTAATTTGAGACGGATGTAAT 58.959 33.333 0.00 0.00 39.21 1.89
290 342 9.309516 GACAAGTAATTTGAGACGGATGTAATA 57.690 33.333 0.00 0.00 39.21 0.98
319 371 2.176546 CCCGAAATGCTGCACACG 59.823 61.111 3.57 10.98 0.00 4.49
374 426 2.056906 AACAGCACCCACCTCTGTCC 62.057 60.000 0.00 0.00 39.86 4.02
388 440 2.124570 GTCCGCATGCACCTGGAT 60.125 61.111 19.57 0.00 32.18 3.41
390 442 2.903855 CCGCATGCACCTGGATCC 60.904 66.667 19.57 4.20 0.00 3.36
394 446 0.888285 GCATGCACCTGGATCCTAGC 60.888 60.000 14.21 11.76 0.00 3.42
399 451 3.996124 CCTGGATCCTAGCGGCCG 61.996 72.222 24.05 24.05 0.00 6.13
454 506 3.412624 GACCCAGCCAGCCTGATCC 62.413 68.421 0.00 0.00 44.64 3.36
455 507 3.095163 CCCAGCCAGCCTGATCCT 61.095 66.667 0.00 0.00 44.64 3.24
456 508 2.509916 CCAGCCAGCCTGATCCTC 59.490 66.667 0.00 0.00 44.64 3.71
457 509 2.509916 CAGCCAGCCTGATCCTCC 59.490 66.667 0.00 0.00 44.64 4.30
458 510 2.771762 AGCCAGCCTGATCCTCCC 60.772 66.667 0.00 0.00 0.00 4.30
459 511 3.883549 GCCAGCCTGATCCTCCCC 61.884 72.222 0.00 0.00 0.00 4.81
460 512 2.367377 CCAGCCTGATCCTCCCCA 60.367 66.667 0.00 0.00 0.00 4.96
471 523 2.452114 CTCCCCACTCTCCAGGGT 59.548 66.667 0.00 0.00 43.89 4.34
472 524 1.687493 CTCCCCACTCTCCAGGGTC 60.687 68.421 0.00 0.00 43.89 4.46
535 592 3.528370 CGGCCTACTCCGGTCCAG 61.528 72.222 0.00 0.00 45.38 3.86
551 608 3.307762 GGTCCAGGCTCAAGTACAAGATT 60.308 47.826 0.00 0.00 0.00 2.40
571 628 8.926710 CAAGATTATTATCCTGGTCACGATAAC 58.073 37.037 0.00 0.00 34.62 1.89
581 638 4.183101 TGGTCACGATAACCCGTATTTTC 58.817 43.478 0.00 0.00 41.29 2.29
612 669 4.016706 CCCCACGGCGTCTCCTTT 62.017 66.667 10.85 0.00 0.00 3.11
613 670 2.032071 CCCACGGCGTCTCCTTTT 59.968 61.111 10.85 0.00 0.00 2.27
617 674 2.813908 CGGCGTCTCCTTTTCCCG 60.814 66.667 0.00 0.00 0.00 5.14
691 758 2.353011 CCATGCAACACCCACTTTGATC 60.353 50.000 0.00 0.00 0.00 2.92
704 771 3.489355 ACTTTGATCAAGTGCCATCACA 58.511 40.909 8.41 0.00 44.70 3.58
721 792 2.146342 CACACACACATGTTCCTCTCC 58.854 52.381 0.00 0.00 36.72 3.71
726 797 3.077359 CACACATGTTCCTCTCCTTTCC 58.923 50.000 0.00 0.00 0.00 3.13
729 800 2.637872 ACATGTTCCTCTCCTTTCCGAA 59.362 45.455 0.00 0.00 0.00 4.30
745 816 8.673711 TCCTTTCCGAATAAATAACAAGTGATG 58.326 33.333 0.00 0.00 0.00 3.07
760 831 6.668323 ACAAGTGATGTAACAGTACAAATGC 58.332 36.000 0.00 0.00 43.41 3.56
849 924 7.395617 TGGTTTGTGCAGTGGTAGTAATAATA 58.604 34.615 0.00 0.00 0.00 0.98
883 958 1.792949 CGTGGACAAGTGCTAACTGTC 59.207 52.381 0.00 0.00 36.51 3.51
884 959 2.143925 GTGGACAAGTGCTAACTGTCC 58.856 52.381 12.51 12.51 45.37 4.02
888 963 2.222027 ACAAGTGCTAACTGTCCAAGC 58.778 47.619 3.58 3.58 36.51 4.01
889 964 1.537202 CAAGTGCTAACTGTCCAAGCC 59.463 52.381 7.13 1.01 36.51 4.35
903 978 1.229496 AAGCCCCATTTTGACCCCC 60.229 57.895 0.00 0.00 0.00 5.40
952 1027 0.321671 GCAGTGCAACCTACTCCTCA 59.678 55.000 11.09 0.00 37.80 3.86
965 1040 7.077050 ACCTACTCCTCACGTACTATATTCT 57.923 40.000 0.00 0.00 0.00 2.40
966 1041 8.200024 ACCTACTCCTCACGTACTATATTCTA 57.800 38.462 0.00 0.00 0.00 2.10
967 1042 8.093927 ACCTACTCCTCACGTACTATATTCTAC 58.906 40.741 0.00 0.00 0.00 2.59
968 1043 7.275341 CCTACTCCTCACGTACTATATTCTACG 59.725 44.444 9.28 9.28 41.24 3.51
1073 3244 0.108472 TTGGCACTGCTCATCTCTCG 60.108 55.000 0.00 0.00 0.00 4.04
1093 3266 1.480545 GCTCTCTCTCTCTTTCCCCAC 59.519 57.143 0.00 0.00 0.00 4.61
1108 3287 2.740055 CACCTCTGCTCACGCACC 60.740 66.667 0.00 0.00 42.25 5.01
1109 3288 4.008933 ACCTCTGCTCACGCACCC 62.009 66.667 0.00 0.00 42.25 4.61
1110 3289 4.007644 CCTCTGCTCACGCACCCA 62.008 66.667 0.00 0.00 42.25 4.51
1111 3290 2.031012 CTCTGCTCACGCACCCAA 59.969 61.111 0.00 0.00 42.25 4.12
1112 3291 1.597854 CTCTGCTCACGCACCCAAA 60.598 57.895 0.00 0.00 42.25 3.28
1113 3292 1.572085 CTCTGCTCACGCACCCAAAG 61.572 60.000 0.00 0.00 42.25 2.77
1114 3293 3.259425 CTGCTCACGCACCCAAAGC 62.259 63.158 0.00 0.00 42.25 3.51
1115 3294 3.286751 GCTCACGCACCCAAAGCA 61.287 61.111 0.00 0.00 35.78 3.91
1116 3295 2.639286 CTCACGCACCCAAAGCAC 59.361 61.111 0.00 0.00 0.00 4.40
1131 3310 1.009675 GCACAGCCACAAGTTCACG 60.010 57.895 0.00 0.00 0.00 4.35
1136 3315 2.954753 GCCACAAGTTCACGAGCCG 61.955 63.158 0.00 0.00 0.00 5.52
1139 3318 3.777925 CAAGTTCACGAGCCGGCG 61.778 66.667 23.20 10.77 37.29 6.46
1255 3435 1.655329 CGGAGGATGTACTCGCTCC 59.345 63.158 0.00 0.00 38.39 4.70
1280 3460 1.902508 TCTCATGAAGGTCCTCCACAC 59.097 52.381 0.00 0.00 35.89 3.82
1289 3469 1.275291 GGTCCTCCACACGATGAAGAA 59.725 52.381 0.00 0.00 0.00 2.52
1294 3474 1.883926 TCCACACGATGAAGAAGACGA 59.116 47.619 0.00 0.00 0.00 4.20
1429 3636 4.070552 AGAGGAAGGGCGTCGTGC 62.071 66.667 0.00 0.00 45.38 5.34
1446 3653 2.046892 CGGGTGAAGGTGCTCCTG 60.047 66.667 8.37 0.00 44.35 3.86
1485 3692 2.807045 CTGCTGTCGCTGACCGTC 60.807 66.667 6.30 0.00 37.28 4.79
1539 3746 1.000731 GAGATCAAGAGGATGGAGGCG 59.999 57.143 0.00 0.00 36.00 5.52
1661 3878 1.103803 ATCATGTAGCGTCGTGTCCT 58.896 50.000 0.00 0.00 0.00 3.85
1662 3879 0.885879 TCATGTAGCGTCGTGTCCTT 59.114 50.000 0.00 0.00 0.00 3.36
1667 3890 1.068748 GTAGCGTCGTGTCCTTGAGAA 60.069 52.381 0.00 0.00 0.00 2.87
1672 3895 0.319555 TCGTGTCCTTGAGAAAGCGG 60.320 55.000 0.00 0.00 0.00 5.52
1685 3908 0.951040 AAAGCGGGAAGAACAGCGAG 60.951 55.000 0.00 0.00 34.34 5.03
1771 3994 1.413812 TCCGTATGCTGATGCTGATGT 59.586 47.619 0.00 0.00 40.48 3.06
1774 3997 2.867975 CGTATGCTGATGCTGATGTTGA 59.132 45.455 0.00 0.00 40.48 3.18
1777 4000 1.404035 TGCTGATGCTGATGTTGATGC 59.596 47.619 0.00 0.00 40.48 3.91
1778 4001 1.676529 GCTGATGCTGATGTTGATGCT 59.323 47.619 0.00 0.00 36.03 3.79
1779 4002 2.541794 GCTGATGCTGATGTTGATGCTG 60.542 50.000 0.00 0.00 36.03 4.41
1853 4077 1.212616 CTGTTCATCCCGATCGCTTC 58.787 55.000 10.32 0.00 0.00 3.86
1854 4078 0.824109 TGTTCATCCCGATCGCTTCT 59.176 50.000 10.32 0.00 0.00 2.85
1855 4079 1.207089 TGTTCATCCCGATCGCTTCTT 59.793 47.619 10.32 0.00 0.00 2.52
1914 4138 7.801315 TGGAATGAAATTTCGTTTTCTTCGTAG 59.199 33.333 23.11 0.00 36.07 3.51
1938 4162 5.017294 TCATTCGTGCTAATCCATGTGTA 57.983 39.130 0.00 0.00 0.00 2.90
1942 4166 5.984233 TCGTGCTAATCCATGTGTATTTC 57.016 39.130 0.00 0.00 0.00 2.17
1947 4177 7.218773 CGTGCTAATCCATGTGTATTTCTTTTG 59.781 37.037 0.00 0.00 0.00 2.44
1954 4184 5.634859 CCATGTGTATTTCTTTTGAGTTGGC 59.365 40.000 0.00 0.00 0.00 4.52
1959 4189 2.869233 TTCTTTTGAGTTGGCTGTGC 57.131 45.000 0.00 0.00 0.00 4.57
2044 4290 0.875908 TCAGCACGCACTGACAGAAC 60.876 55.000 10.08 0.00 41.72 3.01
2059 4305 1.816835 CAGAACTGGCTACGTACTGGA 59.183 52.381 0.00 0.00 0.00 3.86
2074 4325 9.590088 CTACGTACTGGAAACATTTTTCTAAAC 57.410 33.333 4.44 0.11 40.98 2.01
2085 4336 7.553881 ACATTTTTCTAAACGGATGATCGAT 57.446 32.000 0.00 0.00 0.00 3.59
2091 4342 2.827800 AACGGATGATCGATGCAGAT 57.172 45.000 0.54 0.00 0.00 2.90
2100 4351 1.775385 TCGATGCAGATGGTGTCCTA 58.225 50.000 0.00 0.00 0.00 2.94
2102 4353 1.136891 CGATGCAGATGGTGTCCTACA 59.863 52.381 0.00 0.00 0.00 2.74
2115 4366 4.235360 GTGTCCTACACTACACATCACAC 58.765 47.826 2.97 0.00 45.27 3.82
2133 4390 4.050553 CACACCACATTTTGTTCACATCC 58.949 43.478 0.00 0.00 0.00 3.51
2134 4391 3.703556 ACACCACATTTTGTTCACATCCA 59.296 39.130 0.00 0.00 0.00 3.41
2136 4393 3.243367 ACCACATTTTGTTCACATCCACG 60.243 43.478 0.00 0.00 0.00 4.94
2137 4394 3.004210 CCACATTTTGTTCACATCCACGA 59.996 43.478 0.00 0.00 0.00 4.35
2138 4395 4.498850 CCACATTTTGTTCACATCCACGAA 60.499 41.667 0.00 0.00 0.00 3.85
2139 4396 4.676471 CACATTTTGTTCACATCCACGAAG 59.324 41.667 0.00 0.00 0.00 3.79
2141 4398 1.960417 TTGTTCACATCCACGAAGCA 58.040 45.000 0.00 0.00 0.00 3.91
2142 4399 2.183478 TGTTCACATCCACGAAGCAT 57.817 45.000 0.00 0.00 0.00 3.79
2143 4400 2.503331 TGTTCACATCCACGAAGCATT 58.497 42.857 0.00 0.00 0.00 3.56
2146 4403 3.326836 TCACATCCACGAAGCATTACA 57.673 42.857 0.00 0.00 0.00 2.41
2148 4405 2.741517 CACATCCACGAAGCATTACACA 59.258 45.455 0.00 0.00 0.00 3.72
2149 4406 3.002791 ACATCCACGAAGCATTACACAG 58.997 45.455 0.00 0.00 0.00 3.66
2150 4407 1.438651 TCCACGAAGCATTACACAGC 58.561 50.000 0.00 0.00 0.00 4.40
2151 4408 1.155889 CCACGAAGCATTACACAGCA 58.844 50.000 0.00 0.00 0.00 4.41
2152 4409 1.739466 CCACGAAGCATTACACAGCAT 59.261 47.619 0.00 0.00 0.00 3.79
2153 4410 2.935849 CCACGAAGCATTACACAGCATA 59.064 45.455 0.00 0.00 0.00 3.14
2158 4432 6.021232 CACGAAGCATTACACAGCATATTTTG 60.021 38.462 0.00 0.00 0.00 2.44
2182 4456 4.522022 CAGAAAACAATGGAGAGGAAGCTT 59.478 41.667 0.00 0.00 0.00 3.74
2188 4462 0.176680 TGGAGAGGAAGCTTGCGATC 59.823 55.000 12.66 13.62 0.00 3.69
2189 4463 0.873743 GGAGAGGAAGCTTGCGATCG 60.874 60.000 11.69 11.69 0.00 3.69
2190 4464 0.101399 GAGAGGAAGCTTGCGATCGA 59.899 55.000 21.57 0.59 0.00 3.59
2234 4518 5.493133 TCATTTGTTGGTTACGATATGGC 57.507 39.130 0.00 0.00 0.00 4.40
2279 4563 0.031585 GGGTTTTTGTCCTGGAACGC 59.968 55.000 0.00 0.00 0.00 4.84
2359 4648 3.609853 TGCTGTTCTCTCTCTCTCTCTC 58.390 50.000 0.00 0.00 0.00 3.20
2360 4649 3.264193 TGCTGTTCTCTCTCTCTCTCTCT 59.736 47.826 0.00 0.00 0.00 3.10
2361 4650 3.873952 GCTGTTCTCTCTCTCTCTCTCTC 59.126 52.174 0.00 0.00 0.00 3.20
2422 4711 4.067896 GGATGACTGAATCGGTTGCATAT 58.932 43.478 0.00 0.00 0.00 1.78
2423 4712 5.221621 TGGATGACTGAATCGGTTGCATATA 60.222 40.000 0.00 0.00 0.00 0.86
2428 4717 8.083462 TGACTGAATCGGTTGCATATATAAAC 57.917 34.615 0.00 3.03 0.00 2.01
2441 4730 6.268847 TGCATATATAAACCCCAACAAATCCC 59.731 38.462 0.00 0.00 0.00 3.85
2450 4746 5.220521 ACCCCAACAAATCCCTTTTTAGAA 58.779 37.500 0.00 0.00 0.00 2.10
2487 4783 5.126779 ACAACCACTCCTTTCTTCTTCTTC 58.873 41.667 0.00 0.00 0.00 2.87
2488 4784 5.104318 ACAACCACTCCTTTCTTCTTCTTCT 60.104 40.000 0.00 0.00 0.00 2.85
2489 4785 5.638530 ACCACTCCTTTCTTCTTCTTCTT 57.361 39.130 0.00 0.00 0.00 2.52
2507 4803 7.516198 TCTTCTTCTTCTTCTTCCAAATTGG 57.484 36.000 5.48 5.48 39.43 3.16
2555 4851 2.091541 AGTGTTGTGGTTGAGTTGTGG 58.908 47.619 0.00 0.00 0.00 4.17
2591 4887 4.201485 GCCTCGCGAAAATGTTGTTTATTG 60.201 41.667 11.33 0.00 0.00 1.90
2629 4925 5.004345 CACGTTTTGTGTTTTTAGCTGGAAG 59.996 40.000 0.00 0.00 43.88 3.46
2630 4926 5.106078 ACGTTTTGTGTTTTTAGCTGGAAGA 60.106 36.000 0.00 0.00 34.07 2.87
2631 4927 5.977129 CGTTTTGTGTTTTTAGCTGGAAGAT 59.023 36.000 0.00 0.00 34.07 2.40
2632 4928 7.136119 CGTTTTGTGTTTTTAGCTGGAAGATA 58.864 34.615 0.00 0.00 34.07 1.98
2643 4943 7.886629 TTAGCTGGAAGATATTGAGCAAAAT 57.113 32.000 0.00 0.00 33.19 1.82
2652 4952 5.975344 AGATATTGAGCAAAATGAATGTGCG 59.025 36.000 0.00 0.00 43.16 5.34
2676 4976 3.837213 CACATTTCGGTGCAAGATCTT 57.163 42.857 0.88 0.88 31.10 2.40
2677 4977 3.495193 CACATTTCGGTGCAAGATCTTG 58.505 45.455 27.82 27.82 43.14 3.02
2678 4978 3.058016 CACATTTCGGTGCAAGATCTTGT 60.058 43.478 30.88 10.63 42.31 3.16
2679 4979 4.154015 CACATTTCGGTGCAAGATCTTGTA 59.846 41.667 30.88 26.15 42.31 2.41
2680 4980 4.393062 ACATTTCGGTGCAAGATCTTGTAG 59.607 41.667 30.88 18.62 42.31 2.74
2681 4981 3.953712 TTCGGTGCAAGATCTTGTAGA 57.046 42.857 30.88 20.33 42.31 2.59
2682 4982 4.471904 TTCGGTGCAAGATCTTGTAGAT 57.528 40.909 30.88 0.00 42.31 1.98
2683 4983 4.471904 TCGGTGCAAGATCTTGTAGATT 57.528 40.909 30.88 0.00 42.31 2.40
2684 4984 4.183865 TCGGTGCAAGATCTTGTAGATTG 58.816 43.478 30.88 18.24 42.31 2.67
2685 4985 3.310774 CGGTGCAAGATCTTGTAGATTGG 59.689 47.826 30.88 13.68 42.31 3.16
2686 4986 4.265073 GGTGCAAGATCTTGTAGATTGGT 58.735 43.478 30.88 0.00 42.31 3.67
2687 4987 4.702131 GGTGCAAGATCTTGTAGATTGGTT 59.298 41.667 30.88 0.00 42.31 3.67
2688 4988 5.392380 GGTGCAAGATCTTGTAGATTGGTTG 60.392 44.000 30.88 7.67 42.31 3.77
2689 4989 4.701651 TGCAAGATCTTGTAGATTGGTTGG 59.298 41.667 30.88 6.75 42.31 3.77
2690 4990 4.702131 GCAAGATCTTGTAGATTGGTTGGT 59.298 41.667 30.88 0.00 42.31 3.67
2691 4991 5.183904 GCAAGATCTTGTAGATTGGTTGGTT 59.816 40.000 30.88 0.00 42.31 3.67
2692 4992 6.374333 GCAAGATCTTGTAGATTGGTTGGTTA 59.626 38.462 30.88 0.00 42.31 2.85
2693 4993 7.094377 GCAAGATCTTGTAGATTGGTTGGTTAA 60.094 37.037 30.88 0.00 42.31 2.01
2694 4994 8.792633 CAAGATCTTGTAGATTGGTTGGTTAAA 58.207 33.333 24.65 0.00 34.53 1.52
2695 4995 8.567285 AGATCTTGTAGATTGGTTGGTTAAAG 57.433 34.615 0.00 0.00 34.53 1.85
2696 4996 8.164070 AGATCTTGTAGATTGGTTGGTTAAAGT 58.836 33.333 0.00 0.00 34.53 2.66
2697 4997 9.444600 GATCTTGTAGATTGGTTGGTTAAAGTA 57.555 33.333 0.00 0.00 34.53 2.24
2698 4998 9.975218 ATCTTGTAGATTGGTTGGTTAAAGTAT 57.025 29.630 0.00 0.00 28.69 2.12
2699 4999 9.444600 TCTTGTAGATTGGTTGGTTAAAGTATC 57.555 33.333 0.00 0.00 0.00 2.24
2700 5000 9.449719 CTTGTAGATTGGTTGGTTAAAGTATCT 57.550 33.333 0.00 0.00 0.00 1.98
2702 5002 9.880157 TGTAGATTGGTTGGTTAAAGTATCTAC 57.120 33.333 0.00 0.00 38.00 2.59
2703 5003 9.028185 GTAGATTGGTTGGTTAAAGTATCTACG 57.972 37.037 0.00 0.00 31.23 3.51
2704 5004 7.046033 AGATTGGTTGGTTAAAGTATCTACGG 58.954 38.462 0.00 0.00 0.00 4.02
2705 5005 4.506758 TGGTTGGTTAAAGTATCTACGGC 58.493 43.478 0.00 0.00 0.00 5.68
2706 5006 3.873361 GGTTGGTTAAAGTATCTACGGCC 59.127 47.826 0.00 0.00 0.00 6.13
2707 5007 4.506758 GTTGGTTAAAGTATCTACGGCCA 58.493 43.478 2.24 0.00 0.00 5.36
2708 5008 4.395959 TGGTTAAAGTATCTACGGCCAG 57.604 45.455 2.24 0.00 0.00 4.85
2709 5009 4.025360 TGGTTAAAGTATCTACGGCCAGA 58.975 43.478 2.24 0.00 0.00 3.86
2710 5010 4.142093 TGGTTAAAGTATCTACGGCCAGAC 60.142 45.833 2.24 0.00 0.00 3.51
2711 5011 4.099113 GGTTAAAGTATCTACGGCCAGACT 59.901 45.833 2.24 0.00 0.00 3.24
2712 5012 5.394993 GGTTAAAGTATCTACGGCCAGACTT 60.395 44.000 2.24 0.00 0.00 3.01
2713 5013 4.388378 AAAGTATCTACGGCCAGACTTC 57.612 45.455 2.24 0.00 0.00 3.01
2714 5014 1.948145 AGTATCTACGGCCAGACTTCG 59.052 52.381 2.24 0.00 0.00 3.79
2715 5015 0.666913 TATCTACGGCCAGACTTCGC 59.333 55.000 2.24 0.00 0.00 4.70
2716 5016 1.320344 ATCTACGGCCAGACTTCGCA 61.320 55.000 2.24 0.00 0.00 5.10
2717 5017 1.080093 CTACGGCCAGACTTCGCAA 60.080 57.895 2.24 0.00 0.00 4.85
2718 5018 0.669318 CTACGGCCAGACTTCGCAAA 60.669 55.000 2.24 0.00 0.00 3.68
2719 5019 0.036765 TACGGCCAGACTTCGCAAAT 60.037 50.000 2.24 0.00 0.00 2.32
2720 5020 1.298859 ACGGCCAGACTTCGCAAATC 61.299 55.000 2.24 0.00 0.00 2.17
2721 5021 1.803289 GGCCAGACTTCGCAAATCC 59.197 57.895 0.00 0.00 0.00 3.01
2722 5022 0.960364 GGCCAGACTTCGCAAATCCA 60.960 55.000 0.00 0.00 0.00 3.41
2723 5023 0.449388 GCCAGACTTCGCAAATCCAG 59.551 55.000 0.00 0.00 0.00 3.86
2724 5024 0.449388 CCAGACTTCGCAAATCCAGC 59.551 55.000 0.00 0.00 0.00 4.85
2725 5025 1.446907 CAGACTTCGCAAATCCAGCT 58.553 50.000 0.00 0.00 0.00 4.24
2726 5026 1.396301 CAGACTTCGCAAATCCAGCTC 59.604 52.381 0.00 0.00 0.00 4.09
2727 5027 1.277557 AGACTTCGCAAATCCAGCTCT 59.722 47.619 0.00 0.00 0.00 4.09
2728 5028 2.079925 GACTTCGCAAATCCAGCTCTT 58.920 47.619 0.00 0.00 0.00 2.85
2729 5029 2.485814 GACTTCGCAAATCCAGCTCTTT 59.514 45.455 0.00 0.00 0.00 2.52
2730 5030 3.674997 ACTTCGCAAATCCAGCTCTTTA 58.325 40.909 0.00 0.00 0.00 1.85
2731 5031 4.265073 ACTTCGCAAATCCAGCTCTTTAT 58.735 39.130 0.00 0.00 0.00 1.40
2732 5032 5.428253 ACTTCGCAAATCCAGCTCTTTATA 58.572 37.500 0.00 0.00 0.00 0.98
2733 5033 5.294552 ACTTCGCAAATCCAGCTCTTTATAC 59.705 40.000 0.00 0.00 0.00 1.47
2734 5034 3.802139 TCGCAAATCCAGCTCTTTATACG 59.198 43.478 0.00 0.00 0.00 3.06
2735 5035 3.604772 CGCAAATCCAGCTCTTTATACGC 60.605 47.826 0.00 0.00 0.00 4.42
2736 5036 3.304057 GCAAATCCAGCTCTTTATACGCC 60.304 47.826 0.00 0.00 0.00 5.68
2737 5037 4.130118 CAAATCCAGCTCTTTATACGCCT 58.870 43.478 0.00 0.00 0.00 5.52
2738 5038 3.669251 ATCCAGCTCTTTATACGCCTC 57.331 47.619 0.00 0.00 0.00 4.70
2739 5039 1.337071 TCCAGCTCTTTATACGCCTCG 59.663 52.381 0.00 0.00 0.00 4.63
2740 5040 1.603172 CCAGCTCTTTATACGCCTCGG 60.603 57.143 0.00 0.00 0.00 4.63
2741 5041 0.674534 AGCTCTTTATACGCCTCGGG 59.325 55.000 0.00 0.00 0.00 5.14
2742 5042 0.944788 GCTCTTTATACGCCTCGGGC 60.945 60.000 4.96 4.96 46.75 6.13
2767 5067 4.899239 CAGACAGCCCCCGCGATC 62.899 72.222 8.23 0.00 41.18 3.69
2774 5074 2.603473 CCCCCGCGATCCCTCATA 60.603 66.667 8.23 0.00 0.00 2.15
2775 5075 1.990060 CCCCCGCGATCCCTCATAT 60.990 63.158 8.23 0.00 0.00 1.78
2776 5076 1.219124 CCCCGCGATCCCTCATATG 59.781 63.158 8.23 0.00 0.00 1.78
2777 5077 1.219124 CCCGCGATCCCTCATATGG 59.781 63.158 8.23 0.00 0.00 2.74
2779 5079 1.448540 CGCGATCCCTCATATGGGC 60.449 63.158 0.00 0.00 46.67 5.36
2780 5080 1.892819 CGCGATCCCTCATATGGGCT 61.893 60.000 0.00 0.00 46.67 5.19
2781 5081 0.392193 GCGATCCCTCATATGGGCTG 60.392 60.000 2.13 0.00 46.67 4.85
2782 5082 0.392193 CGATCCCTCATATGGGCTGC 60.392 60.000 2.13 0.00 46.67 5.25
2783 5083 0.990374 GATCCCTCATATGGGCTGCT 59.010 55.000 2.13 0.00 46.67 4.24
2784 5084 2.191400 GATCCCTCATATGGGCTGCTA 58.809 52.381 2.13 0.00 46.67 3.49
2785 5085 1.352083 TCCCTCATATGGGCTGCTAC 58.648 55.000 2.13 0.00 46.67 3.58
2786 5086 1.059098 CCCTCATATGGGCTGCTACA 58.941 55.000 2.13 0.00 40.84 2.74
2787 5087 1.271054 CCCTCATATGGGCTGCTACAC 60.271 57.143 2.13 0.00 40.84 2.90
2788 5088 1.417517 CCTCATATGGGCTGCTACACA 59.582 52.381 2.13 0.00 0.00 3.72
2789 5089 2.039480 CCTCATATGGGCTGCTACACAT 59.961 50.000 2.13 2.57 0.00 3.21
2790 5090 3.497405 CCTCATATGGGCTGCTACACATT 60.497 47.826 2.13 0.00 0.00 2.71
2791 5091 3.743521 TCATATGGGCTGCTACACATTC 58.256 45.455 2.13 0.00 0.00 2.67
2792 5092 3.136260 TCATATGGGCTGCTACACATTCA 59.864 43.478 2.13 0.00 0.00 2.57
2793 5093 2.742428 ATGGGCTGCTACACATTCAT 57.258 45.000 0.00 0.00 0.00 2.57
2794 5094 3.862877 ATGGGCTGCTACACATTCATA 57.137 42.857 0.00 0.00 0.00 2.15
2795 5095 3.862877 TGGGCTGCTACACATTCATAT 57.137 42.857 0.00 0.00 0.00 1.78
2796 5096 3.479489 TGGGCTGCTACACATTCATATG 58.521 45.455 0.00 0.00 37.79 1.78
2797 5097 3.117926 TGGGCTGCTACACATTCATATGT 60.118 43.478 1.90 0.00 45.81 2.29
2798 5098 3.885297 GGGCTGCTACACATTCATATGTT 59.115 43.478 1.90 0.00 42.29 2.71
2799 5099 4.339247 GGGCTGCTACACATTCATATGTTT 59.661 41.667 1.90 0.00 42.29 2.83
2800 5100 5.163519 GGGCTGCTACACATTCATATGTTTT 60.164 40.000 1.90 0.00 42.29 2.43
2801 5101 6.039270 GGGCTGCTACACATTCATATGTTTTA 59.961 38.462 1.90 0.00 42.29 1.52
2802 5102 7.416213 GGGCTGCTACACATTCATATGTTTTAA 60.416 37.037 1.90 0.00 42.29 1.52
2803 5103 7.973388 GGCTGCTACACATTCATATGTTTTAAA 59.027 33.333 1.90 0.00 42.29 1.52
2804 5104 9.520204 GCTGCTACACATTCATATGTTTTAAAT 57.480 29.630 1.90 0.00 42.29 1.40
2806 5106 9.299963 TGCTACACATTCATATGTTTTAAATGC 57.700 29.630 11.88 7.04 42.29 3.56
2807 5107 8.471457 GCTACACATTCATATGTTTTAAATGCG 58.529 33.333 11.88 7.08 42.29 4.73
2808 5108 7.754069 ACACATTCATATGTTTTAAATGCGG 57.246 32.000 11.88 8.44 42.29 5.69
2809 5109 7.542890 ACACATTCATATGTTTTAAATGCGGA 58.457 30.769 11.88 0.00 42.29 5.54
2810 5110 7.701924 ACACATTCATATGTTTTAAATGCGGAG 59.298 33.333 11.88 5.20 42.29 4.63
2828 5128 4.887748 CGGAGCCTCAAATCTATACATGT 58.112 43.478 2.69 2.69 0.00 3.21
2829 5129 4.926238 CGGAGCCTCAAATCTATACATGTC 59.074 45.833 0.00 0.00 0.00 3.06
2830 5130 5.509670 CGGAGCCTCAAATCTATACATGTCA 60.510 44.000 0.00 0.00 0.00 3.58
2831 5131 6.291377 GGAGCCTCAAATCTATACATGTCAA 58.709 40.000 0.00 0.00 0.00 3.18
2832 5132 6.939163 GGAGCCTCAAATCTATACATGTCAAT 59.061 38.462 0.00 0.00 0.00 2.57
2833 5133 7.118971 GGAGCCTCAAATCTATACATGTCAATC 59.881 40.741 0.00 0.00 0.00 2.67
2834 5134 7.512130 AGCCTCAAATCTATACATGTCAATCA 58.488 34.615 0.00 0.00 0.00 2.57
2835 5135 8.162085 AGCCTCAAATCTATACATGTCAATCAT 58.838 33.333 0.00 0.00 37.22 2.45
2836 5136 9.440773 GCCTCAAATCTATACATGTCAATCATA 57.559 33.333 0.00 0.00 34.67 2.15
2849 5149 8.892723 ACATGTCAATCATACGATACAAATTGT 58.107 29.630 3.43 3.43 34.67 2.71
2850 5150 9.373750 CATGTCAATCATACGATACAAATTGTC 57.626 33.333 0.22 0.00 34.67 3.18
2851 5151 7.915508 TGTCAATCATACGATACAAATTGTCC 58.084 34.615 0.22 0.00 31.79 4.02
2852 5152 7.063456 GTCAATCATACGATACAAATTGTCCG 58.937 38.462 15.63 15.63 34.35 4.79
2853 5153 6.981559 TCAATCATACGATACAAATTGTCCGA 59.018 34.615 21.37 9.95 33.11 4.55
2854 5154 7.492994 TCAATCATACGATACAAATTGTCCGAA 59.507 33.333 21.37 0.00 33.11 4.30
2855 5155 7.962964 ATCATACGATACAAATTGTCCGAAT 57.037 32.000 21.37 3.76 33.11 3.34
2856 5156 7.780008 TCATACGATACAAATTGTCCGAATT 57.220 32.000 21.37 7.42 33.11 2.17
2857 5157 7.847487 TCATACGATACAAATTGTCCGAATTC 58.153 34.615 21.37 0.00 33.11 2.17
2858 5158 7.492994 TCATACGATACAAATTGTCCGAATTCA 59.507 33.333 21.37 0.00 33.11 2.57
2859 5159 6.489127 ACGATACAAATTGTCCGAATTCAA 57.511 33.333 21.37 0.00 33.11 2.69
2860 5160 7.083875 ACGATACAAATTGTCCGAATTCAAT 57.916 32.000 21.37 0.83 36.07 2.57
2861 5161 8.203937 ACGATACAAATTGTCCGAATTCAATA 57.796 30.769 21.37 0.00 34.45 1.90
2862 5162 8.335356 ACGATACAAATTGTCCGAATTCAATAG 58.665 33.333 21.37 3.91 34.45 1.73
2863 5163 8.335356 CGATACAAATTGTCCGAATTCAATAGT 58.665 33.333 0.22 4.17 34.45 2.12
2901 5201 9.801873 AAATAAAATCATAGTTCAACAATCCCG 57.198 29.630 0.00 0.00 0.00 5.14
2902 5202 8.746052 ATAAAATCATAGTTCAACAATCCCGA 57.254 30.769 0.00 0.00 0.00 5.14
2903 5203 6.436843 AAATCATAGTTCAACAATCCCGAC 57.563 37.500 0.00 0.00 0.00 4.79
2904 5204 4.545208 TCATAGTTCAACAATCCCGACA 57.455 40.909 0.00 0.00 0.00 4.35
2905 5205 5.097742 TCATAGTTCAACAATCCCGACAT 57.902 39.130 0.00 0.00 0.00 3.06
2906 5206 4.875536 TCATAGTTCAACAATCCCGACATG 59.124 41.667 0.00 0.00 0.00 3.21
2907 5207 1.812571 AGTTCAACAATCCCGACATGC 59.187 47.619 0.00 0.00 0.00 4.06
2908 5208 1.135402 GTTCAACAATCCCGACATGCC 60.135 52.381 0.00 0.00 0.00 4.40
2909 5209 0.037447 TCAACAATCCCGACATGCCA 59.963 50.000 0.00 0.00 0.00 4.92
2910 5210 0.887247 CAACAATCCCGACATGCCAA 59.113 50.000 0.00 0.00 0.00 4.52
2911 5211 1.271934 CAACAATCCCGACATGCCAAA 59.728 47.619 0.00 0.00 0.00 3.28
2912 5212 1.626686 ACAATCCCGACATGCCAAAA 58.373 45.000 0.00 0.00 0.00 2.44
2913 5213 2.178580 ACAATCCCGACATGCCAAAAT 58.821 42.857 0.00 0.00 0.00 1.82
2914 5214 2.094078 ACAATCCCGACATGCCAAAATG 60.094 45.455 0.00 0.00 0.00 2.32
2915 5215 2.142356 ATCCCGACATGCCAAAATGA 57.858 45.000 0.00 0.00 0.00 2.57
2916 5216 1.916506 TCCCGACATGCCAAAATGAA 58.083 45.000 0.00 0.00 0.00 2.57
2917 5217 2.242926 TCCCGACATGCCAAAATGAAA 58.757 42.857 0.00 0.00 0.00 2.69
2918 5218 2.830923 TCCCGACATGCCAAAATGAAAT 59.169 40.909 0.00 0.00 0.00 2.17
2919 5219 4.019858 TCCCGACATGCCAAAATGAAATA 58.980 39.130 0.00 0.00 0.00 1.40
2920 5220 4.464244 TCCCGACATGCCAAAATGAAATAA 59.536 37.500 0.00 0.00 0.00 1.40
2921 5221 5.047021 TCCCGACATGCCAAAATGAAATAAA 60.047 36.000 0.00 0.00 0.00 1.40
2922 5222 5.816777 CCCGACATGCCAAAATGAAATAAAT 59.183 36.000 0.00 0.00 0.00 1.40
2923 5223 6.983307 CCCGACATGCCAAAATGAAATAAATA 59.017 34.615 0.00 0.00 0.00 1.40
2924 5224 7.656948 CCCGACATGCCAAAATGAAATAAATAT 59.343 33.333 0.00 0.00 0.00 1.28
2925 5225 9.044150 CCGACATGCCAAAATGAAATAAATATT 57.956 29.630 0.00 0.00 0.00 1.28
2945 5245 4.823790 TTTGATCATGATGAATGCCTCG 57.176 40.909 14.30 0.00 36.11 4.63
2946 5246 2.148768 TGATCATGATGAATGCCTCGC 58.851 47.619 14.30 0.00 36.11 5.03
2947 5247 2.224450 TGATCATGATGAATGCCTCGCT 60.224 45.455 14.30 0.00 36.11 4.93
2948 5248 2.336945 TCATGATGAATGCCTCGCTT 57.663 45.000 0.00 0.00 36.11 4.68
2949 5249 1.944709 TCATGATGAATGCCTCGCTTG 59.055 47.619 0.00 0.00 36.11 4.01
2950 5250 0.666913 ATGATGAATGCCTCGCTTGC 59.333 50.000 0.00 0.00 0.00 4.01
2951 5251 0.393402 TGATGAATGCCTCGCTTGCT 60.393 50.000 0.00 0.00 0.00 3.91
2952 5252 1.134431 TGATGAATGCCTCGCTTGCTA 60.134 47.619 0.00 0.00 0.00 3.49
2953 5253 1.530293 GATGAATGCCTCGCTTGCTAG 59.470 52.381 0.00 0.00 0.00 3.42
2954 5254 1.091771 TGAATGCCTCGCTTGCTAGC 61.092 55.000 8.10 8.10 44.21 3.42
2955 5255 1.780025 GAATGCCTCGCTTGCTAGCC 61.780 60.000 13.29 0.98 44.86 3.93
2956 5256 4.819761 TGCCTCGCTTGCTAGCCG 62.820 66.667 13.29 8.98 44.86 5.52
2958 5258 3.838271 CCTCGCTTGCTAGCCGGA 61.838 66.667 13.29 6.11 44.86 5.14
2959 5259 2.419198 CTCGCTTGCTAGCCGGAT 59.581 61.111 13.29 0.00 44.86 4.18
2960 5260 1.663074 CTCGCTTGCTAGCCGGATC 60.663 63.158 13.29 0.00 44.86 3.36
2961 5261 2.106938 CGCTTGCTAGCCGGATCA 59.893 61.111 13.29 0.00 44.86 2.92
2962 5262 2.240500 CGCTTGCTAGCCGGATCAC 61.241 63.158 13.29 0.00 44.86 3.06
2963 5263 1.144936 GCTTGCTAGCCGGATCACT 59.855 57.895 13.29 0.00 41.74 3.41
2964 5264 0.878086 GCTTGCTAGCCGGATCACTC 60.878 60.000 13.29 0.00 41.74 3.51
2965 5265 0.596083 CTTGCTAGCCGGATCACTCG 60.596 60.000 13.29 0.00 0.00 4.18
2966 5266 1.320344 TTGCTAGCCGGATCACTCGT 61.320 55.000 13.29 0.00 0.00 4.18
2967 5267 1.008309 GCTAGCCGGATCACTCGTC 60.008 63.158 5.05 0.00 0.00 4.20
2968 5268 1.280142 CTAGCCGGATCACTCGTCG 59.720 63.158 5.05 0.00 0.00 5.12
2969 5269 2.119147 CTAGCCGGATCACTCGTCGG 62.119 65.000 5.05 0.00 44.70 4.79
2970 5270 2.598098 TAGCCGGATCACTCGTCGGA 62.598 60.000 5.05 0.00 44.69 4.55
2971 5271 2.408022 CCGGATCACTCGTCGGAC 59.592 66.667 0.00 0.00 44.69 4.79
2972 5272 2.022902 CGGATCACTCGTCGGACG 59.977 66.667 23.73 23.73 44.19 4.79
2973 5273 2.278013 GGATCACTCGTCGGACGC 60.278 66.667 24.76 10.04 42.21 5.19
2974 5274 2.278013 GATCACTCGTCGGACGCC 60.278 66.667 24.76 6.43 42.21 5.68
2975 5275 3.753070 GATCACTCGTCGGACGCCC 62.753 68.421 24.76 6.75 42.21 6.13
2977 5277 4.477975 CACTCGTCGGACGCCCTC 62.478 72.222 24.76 0.00 42.21 4.30
2981 5281 4.873129 CGTCGGACGCCCTCCATG 62.873 72.222 18.36 0.00 39.39 3.66
2990 5290 3.736224 CCCTCCATGCCACCTGCT 61.736 66.667 0.00 0.00 42.00 4.24
2991 5291 2.357836 CCTCCATGCCACCTGCTT 59.642 61.111 0.00 0.00 42.00 3.91
2992 5292 1.751927 CCTCCATGCCACCTGCTTC 60.752 63.158 0.00 0.00 42.00 3.86
2993 5293 2.046023 TCCATGCCACCTGCTTCG 60.046 61.111 0.00 0.00 42.00 3.79
2994 5294 2.046023 CCATGCCACCTGCTTCGA 60.046 61.111 0.00 0.00 42.00 3.71
2995 5295 2.110967 CCATGCCACCTGCTTCGAG 61.111 63.158 0.00 0.00 42.00 4.04
2996 5296 1.078918 CATGCCACCTGCTTCGAGA 60.079 57.895 0.00 0.00 42.00 4.04
2997 5297 1.078848 ATGCCACCTGCTTCGAGAC 60.079 57.895 0.00 0.00 42.00 3.36
2998 5298 2.435059 GCCACCTGCTTCGAGACC 60.435 66.667 0.00 0.00 36.87 3.85
2999 5299 3.059982 CCACCTGCTTCGAGACCA 58.940 61.111 0.00 0.00 0.00 4.02
3000 5300 1.599047 CCACCTGCTTCGAGACCAT 59.401 57.895 0.00 0.00 0.00 3.55
3001 5301 0.460987 CCACCTGCTTCGAGACCATC 60.461 60.000 0.00 0.00 0.00 3.51
3002 5302 0.460987 CACCTGCTTCGAGACCATCC 60.461 60.000 0.00 0.00 0.00 3.51
3003 5303 0.616111 ACCTGCTTCGAGACCATCCT 60.616 55.000 0.00 0.00 0.00 3.24
3004 5304 0.539051 CCTGCTTCGAGACCATCCTT 59.461 55.000 0.00 0.00 0.00 3.36
3005 5305 1.649664 CTGCTTCGAGACCATCCTTG 58.350 55.000 0.00 0.00 0.00 3.61
3006 5306 0.391661 TGCTTCGAGACCATCCTTGC 60.392 55.000 0.00 0.00 0.00 4.01
3007 5307 0.107945 GCTTCGAGACCATCCTTGCT 60.108 55.000 0.00 0.00 0.00 3.91
3008 5308 1.677217 GCTTCGAGACCATCCTTGCTT 60.677 52.381 0.00 0.00 0.00 3.91
3009 5309 2.005451 CTTCGAGACCATCCTTGCTTG 58.995 52.381 0.00 0.00 0.00 4.01
3010 5310 0.391661 TCGAGACCATCCTTGCTTGC 60.392 55.000 0.00 0.00 0.00 4.01
3011 5311 0.392193 CGAGACCATCCTTGCTTGCT 60.392 55.000 0.00 0.00 0.00 3.91
3012 5312 1.093159 GAGACCATCCTTGCTTGCTG 58.907 55.000 0.00 0.00 0.00 4.41
3013 5313 0.964358 AGACCATCCTTGCTTGCTGC 60.964 55.000 0.00 0.00 43.25 5.25
3014 5314 0.964358 GACCATCCTTGCTTGCTGCT 60.964 55.000 0.00 0.00 43.37 4.24
3015 5315 0.964358 ACCATCCTTGCTTGCTGCTC 60.964 55.000 0.00 0.00 43.37 4.26
3016 5316 1.664321 CCATCCTTGCTTGCTGCTCC 61.664 60.000 0.00 0.00 43.37 4.70
3017 5317 1.748122 ATCCTTGCTTGCTGCTCCG 60.748 57.895 0.00 0.00 43.37 4.63
3018 5318 4.112341 CCTTGCTTGCTGCTCCGC 62.112 66.667 0.00 1.27 43.37 5.54
3019 5319 4.112341 CTTGCTTGCTGCTCCGCC 62.112 66.667 0.00 0.00 43.37 6.13
3020 5320 4.648626 TTGCTTGCTGCTCCGCCT 62.649 61.111 0.00 0.00 43.37 5.52
3024 5324 4.728110 TTGCTGCTCCGCCTGCAT 62.728 61.111 0.00 0.00 39.86 3.96
3030 5330 4.478371 CTCCGCCTGCATGCTCCA 62.478 66.667 20.33 0.00 0.00 3.86
3031 5331 4.783621 TCCGCCTGCATGCTCCAC 62.784 66.667 20.33 4.91 0.00 4.02
3033 5333 4.790962 CGCCTGCATGCTCCACCT 62.791 66.667 20.33 0.00 0.00 4.00
3034 5334 3.138798 GCCTGCATGCTCCACCTG 61.139 66.667 20.33 0.58 0.00 4.00
3035 5335 3.138798 CCTGCATGCTCCACCTGC 61.139 66.667 20.33 0.00 36.45 4.85
3036 5336 2.360726 CTGCATGCTCCACCTGCA 60.361 61.111 20.33 0.00 43.20 4.41
3038 5338 1.725557 CTGCATGCTCCACCTGCATC 61.726 60.000 20.33 0.00 46.80 3.91
3039 5339 2.487532 GCATGCTCCACCTGCATCC 61.488 63.158 11.37 0.00 46.80 3.51
3040 5340 1.226542 CATGCTCCACCTGCATCCT 59.773 57.895 0.00 0.00 46.80 3.24
3041 5341 0.395311 CATGCTCCACCTGCATCCTT 60.395 55.000 0.00 0.00 46.80 3.36
3042 5342 0.395311 ATGCTCCACCTGCATCCTTG 60.395 55.000 0.00 0.00 46.80 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.431725 ACCGCGCCTGCTTTAAGC 61.432 61.111 10.38 10.38 42.82 3.09
1 2 2.480555 CACCGCGCCTGCTTTAAG 59.519 61.111 0.00 0.00 39.65 1.85
2 3 3.732892 GCACCGCGCCTGCTTTAA 61.733 61.111 17.10 0.00 39.65 1.52
3 4 4.998400 TGCACCGCGCCTGCTTTA 62.998 61.111 22.64 5.29 41.33 1.85
12 13 3.869272 GATCCTTGCTGCACCGCG 61.869 66.667 0.00 0.00 0.00 6.46
13 14 2.747460 TGATCCTTGCTGCACCGC 60.747 61.111 0.00 0.00 0.00 5.68
14 15 1.376424 AGTGATCCTTGCTGCACCG 60.376 57.895 0.00 0.00 31.85 4.94
15 16 1.310933 CCAGTGATCCTTGCTGCACC 61.311 60.000 0.00 0.00 31.85 5.01
16 17 0.607489 ACCAGTGATCCTTGCTGCAC 60.607 55.000 0.00 0.00 0.00 4.57
17 18 0.983467 TACCAGTGATCCTTGCTGCA 59.017 50.000 0.00 0.00 0.00 4.41
18 19 2.113860 TTACCAGTGATCCTTGCTGC 57.886 50.000 0.00 0.00 0.00 5.25
19 20 5.649782 AAAATTACCAGTGATCCTTGCTG 57.350 39.130 0.00 0.00 0.00 4.41
20 21 6.012745 AGAAAAATTACCAGTGATCCTTGCT 58.987 36.000 0.00 0.00 0.00 3.91
21 22 6.272822 AGAAAAATTACCAGTGATCCTTGC 57.727 37.500 0.00 0.00 0.00 4.01
22 23 7.177392 AGGAAGAAAAATTACCAGTGATCCTTG 59.823 37.037 0.00 0.00 0.00 3.61
23 24 7.241628 AGGAAGAAAAATTACCAGTGATCCTT 58.758 34.615 0.00 0.00 0.00 3.36
24 25 6.794534 AGGAAGAAAAATTACCAGTGATCCT 58.205 36.000 0.00 0.00 0.00 3.24
25 26 7.315890 CAAGGAAGAAAAATTACCAGTGATCC 58.684 38.462 0.00 0.00 0.00 3.36
26 27 7.176690 TCCAAGGAAGAAAAATTACCAGTGATC 59.823 37.037 0.00 0.00 0.00 2.92
27 28 7.010160 TCCAAGGAAGAAAAATTACCAGTGAT 58.990 34.615 0.00 0.00 0.00 3.06
28 29 6.369629 TCCAAGGAAGAAAAATTACCAGTGA 58.630 36.000 0.00 0.00 0.00 3.41
29 30 6.648879 TCCAAGGAAGAAAAATTACCAGTG 57.351 37.500 0.00 0.00 0.00 3.66
30 31 7.669089 TTTCCAAGGAAGAAAAATTACCAGT 57.331 32.000 1.32 0.00 35.38 4.00
31 32 6.646653 GCTTTCCAAGGAAGAAAAATTACCAG 59.353 38.462 1.32 0.00 35.38 4.00
32 33 6.326323 AGCTTTCCAAGGAAGAAAAATTACCA 59.674 34.615 1.32 0.00 35.38 3.25
33 34 6.646653 CAGCTTTCCAAGGAAGAAAAATTACC 59.353 38.462 1.32 0.00 35.38 2.85
34 35 6.146184 GCAGCTTTCCAAGGAAGAAAAATTAC 59.854 38.462 1.32 0.00 35.38 1.89
35 36 6.041979 AGCAGCTTTCCAAGGAAGAAAAATTA 59.958 34.615 1.32 0.00 35.38 1.40
36 37 5.059161 GCAGCTTTCCAAGGAAGAAAAATT 58.941 37.500 1.32 0.00 35.38 1.82
37 38 4.346127 AGCAGCTTTCCAAGGAAGAAAAAT 59.654 37.500 1.32 0.00 35.38 1.82
38 39 3.706086 AGCAGCTTTCCAAGGAAGAAAAA 59.294 39.130 1.32 0.00 35.38 1.94
39 40 3.068590 CAGCAGCTTTCCAAGGAAGAAAA 59.931 43.478 0.00 0.00 35.38 2.29
40 41 2.624838 CAGCAGCTTTCCAAGGAAGAAA 59.375 45.455 0.00 0.00 35.38 2.52
41 42 2.233271 CAGCAGCTTTCCAAGGAAGAA 58.767 47.619 0.00 0.00 35.38 2.52
42 43 1.143684 ACAGCAGCTTTCCAAGGAAGA 59.856 47.619 0.00 0.00 35.38 2.87
43 44 1.613836 ACAGCAGCTTTCCAAGGAAG 58.386 50.000 0.00 0.00 35.38 3.46
44 45 1.956477 GAACAGCAGCTTTCCAAGGAA 59.044 47.619 0.00 0.00 0.00 3.36
45 46 1.609208 GAACAGCAGCTTTCCAAGGA 58.391 50.000 0.00 0.00 0.00 3.36
46 47 0.239347 CGAACAGCAGCTTTCCAAGG 59.761 55.000 0.00 0.00 0.00 3.61
47 48 0.947244 ACGAACAGCAGCTTTCCAAG 59.053 50.000 0.00 0.00 0.00 3.61
48 49 0.662619 CACGAACAGCAGCTTTCCAA 59.337 50.000 0.00 0.00 0.00 3.53
49 50 1.785041 GCACGAACAGCAGCTTTCCA 61.785 55.000 0.00 0.00 0.00 3.53
50 51 1.081840 GCACGAACAGCAGCTTTCC 60.082 57.895 0.00 0.00 0.00 3.13
51 52 1.439365 CGCACGAACAGCAGCTTTC 60.439 57.895 0.00 0.00 0.00 2.62
52 53 2.633657 CGCACGAACAGCAGCTTT 59.366 55.556 0.00 0.00 0.00 3.51
53 54 4.017877 GCGCACGAACAGCAGCTT 62.018 61.111 0.30 0.00 0.00 3.74
57 58 3.639008 CACTGCGCACGAACAGCA 61.639 61.111 5.66 0.00 37.42 4.41
58 59 4.374702 CCACTGCGCACGAACAGC 62.375 66.667 5.66 0.00 37.42 4.40
59 60 2.661537 TCCACTGCGCACGAACAG 60.662 61.111 5.66 0.00 39.86 3.16
60 61 2.661537 CTCCACTGCGCACGAACA 60.662 61.111 5.66 0.00 0.00 3.18
61 62 4.077188 GCTCCACTGCGCACGAAC 62.077 66.667 5.66 0.00 0.00 3.95
65 66 0.166814 CTTAAAGCTCCACTGCGCAC 59.833 55.000 5.66 0.00 38.13 5.34
150 152 1.483415 GAATTGCCATGCCCAGTTGAT 59.517 47.619 0.00 0.00 0.00 2.57
151 153 0.896923 GAATTGCCATGCCCAGTTGA 59.103 50.000 0.00 0.00 0.00 3.18
161 213 0.174162 GCGCCTTTCAGAATTGCCAT 59.826 50.000 0.00 0.00 0.00 4.40
171 223 1.098869 TGACAAGTTTGCGCCTTTCA 58.901 45.000 4.18 5.47 0.00 2.69
173 225 2.030274 GGTATGACAAGTTTGCGCCTTT 60.030 45.455 4.18 0.00 0.00 3.11
195 247 2.203029 GGGGGAACGAGCCGATTC 60.203 66.667 1.50 2.61 0.00 2.52
233 285 9.982651 ATTTGTTGTCTAGATACGTATAGCATT 57.017 29.630 8.34 0.00 0.00 3.56
240 292 9.778993 GTCTTACATTTGTTGTCTAGATACGTA 57.221 33.333 0.00 0.00 39.87 3.57
241 293 8.301720 TGTCTTACATTTGTTGTCTAGATACGT 58.698 33.333 0.00 0.00 39.87 3.57
242 294 8.683550 TGTCTTACATTTGTTGTCTAGATACG 57.316 34.615 0.00 0.00 39.87 3.06
255 307 9.318041 CGTCTCAAATTACTTGTCTTACATTTG 57.682 33.333 0.00 0.00 36.34 2.32
256 308 8.504005 CCGTCTCAAATTACTTGTCTTACATTT 58.496 33.333 0.00 0.00 36.34 2.32
257 309 7.876068 TCCGTCTCAAATTACTTGTCTTACATT 59.124 33.333 0.00 0.00 36.34 2.71
258 310 7.383687 TCCGTCTCAAATTACTTGTCTTACAT 58.616 34.615 0.00 0.00 36.34 2.29
259 311 6.751157 TCCGTCTCAAATTACTTGTCTTACA 58.249 36.000 0.00 0.00 36.34 2.41
260 312 7.331193 ACATCCGTCTCAAATTACTTGTCTTAC 59.669 37.037 0.00 0.00 36.34 2.34
261 313 7.383687 ACATCCGTCTCAAATTACTTGTCTTA 58.616 34.615 0.00 0.00 36.34 2.10
262 314 6.231211 ACATCCGTCTCAAATTACTTGTCTT 58.769 36.000 0.00 0.00 36.34 3.01
263 315 5.794894 ACATCCGTCTCAAATTACTTGTCT 58.205 37.500 0.00 0.00 36.34 3.41
264 316 7.591006 TTACATCCGTCTCAAATTACTTGTC 57.409 36.000 0.00 0.00 36.34 3.18
265 317 9.095065 GTATTACATCCGTCTCAAATTACTTGT 57.905 33.333 0.00 0.00 36.34 3.16
266 318 9.314321 AGTATTACATCCGTCTCAAATTACTTG 57.686 33.333 0.00 0.00 36.25 3.16
273 325 9.104965 CCAAATTAGTATTACATCCGTCTCAAA 57.895 33.333 0.00 0.00 0.00 2.69
274 326 8.479689 TCCAAATTAGTATTACATCCGTCTCAA 58.520 33.333 0.00 0.00 0.00 3.02
275 327 8.014070 TCCAAATTAGTATTACATCCGTCTCA 57.986 34.615 0.00 0.00 0.00 3.27
276 328 7.116519 GCTCCAAATTAGTATTACATCCGTCTC 59.883 40.741 0.00 0.00 0.00 3.36
277 329 6.929606 GCTCCAAATTAGTATTACATCCGTCT 59.070 38.462 0.00 0.00 0.00 4.18
278 330 6.147328 GGCTCCAAATTAGTATTACATCCGTC 59.853 42.308 0.00 0.00 0.00 4.79
279 331 5.995897 GGCTCCAAATTAGTATTACATCCGT 59.004 40.000 0.00 0.00 0.00 4.69
280 332 5.411669 GGGCTCCAAATTAGTATTACATCCG 59.588 44.000 0.00 0.00 0.00 4.18
281 333 5.411669 CGGGCTCCAAATTAGTATTACATCC 59.588 44.000 0.00 0.00 0.00 3.51
282 334 6.228258 TCGGGCTCCAAATTAGTATTACATC 58.772 40.000 0.00 0.00 0.00 3.06
283 335 6.182507 TCGGGCTCCAAATTAGTATTACAT 57.817 37.500 0.00 0.00 0.00 2.29
284 336 5.617528 TCGGGCTCCAAATTAGTATTACA 57.382 39.130 0.00 0.00 0.00 2.41
285 337 6.930667 TTTCGGGCTCCAAATTAGTATTAC 57.069 37.500 0.00 0.00 0.00 1.89
286 338 6.016610 GCATTTCGGGCTCCAAATTAGTATTA 60.017 38.462 0.00 0.00 0.00 0.98
287 339 5.221244 GCATTTCGGGCTCCAAATTAGTATT 60.221 40.000 0.00 0.00 0.00 1.89
288 340 4.278419 GCATTTCGGGCTCCAAATTAGTAT 59.722 41.667 0.00 0.00 0.00 2.12
289 341 3.630312 GCATTTCGGGCTCCAAATTAGTA 59.370 43.478 0.00 0.00 0.00 1.82
290 342 2.427095 GCATTTCGGGCTCCAAATTAGT 59.573 45.455 0.00 0.00 0.00 2.24
296 348 2.342650 GCAGCATTTCGGGCTCCAA 61.343 57.895 0.00 0.00 40.23 3.53
319 371 0.032540 ACGTGAGTGGTAACCGGAAC 59.967 55.000 9.46 5.69 46.97 3.62
374 426 0.602106 CTAGGATCCAGGTGCATGCG 60.602 60.000 15.82 0.00 0.00 4.73
390 442 4.899239 CTTGAGCCCGGCCGCTAG 62.899 72.222 22.85 12.00 39.87 3.42
399 451 0.461693 CAGCTACTCTGCTTGAGCCC 60.462 60.000 0.00 0.00 46.41 5.19
406 458 3.897239 AGTAGATCACAGCTACTCTGCT 58.103 45.455 0.00 0.00 43.73 4.24
450 502 0.762461 CCTGGAGAGTGGGGAGGATC 60.762 65.000 0.00 0.00 0.00 3.36
458 510 1.612395 GCAGAGACCCTGGAGAGTGG 61.612 65.000 0.00 0.00 43.13 4.00
459 511 0.614415 AGCAGAGACCCTGGAGAGTG 60.614 60.000 0.00 0.00 43.13 3.51
460 512 0.324275 GAGCAGAGACCCTGGAGAGT 60.324 60.000 0.00 0.00 43.13 3.24
471 523 3.107402 ACTAGTCCAATGGAGCAGAGA 57.893 47.619 14.88 0.00 29.39 3.10
472 524 3.529533 CAACTAGTCCAATGGAGCAGAG 58.470 50.000 14.88 7.39 29.39 3.35
535 592 7.389053 CCAGGATAATAATCTTGTACTTGAGCC 59.611 40.741 0.00 0.00 37.48 4.70
551 608 4.219070 CGGGTTATCGTGACCAGGATAATA 59.781 45.833 20.84 4.88 44.67 0.98
571 628 1.734163 AAGGCGACTGAAAATACGGG 58.266 50.000 0.00 0.00 42.68 5.28
581 638 2.359975 GGGGTGGAAAGGCGACTG 60.360 66.667 0.00 0.00 42.68 3.51
612 669 0.675083 TGACTACGTTTCTGCGGGAA 59.325 50.000 0.00 0.00 35.98 3.97
613 670 0.892755 ATGACTACGTTTCTGCGGGA 59.107 50.000 0.00 0.00 35.98 5.14
617 674 1.654105 CGTGGATGACTACGTTTCTGC 59.346 52.381 0.00 0.00 43.92 4.26
691 758 1.023502 TGTGTGTGTGATGGCACTTG 58.976 50.000 0.00 0.00 45.36 3.16
703 770 2.847327 AGGAGAGGAACATGTGTGTG 57.153 50.000 0.00 0.00 38.92 3.82
704 771 3.496870 GGAAAGGAGAGGAACATGTGTGT 60.497 47.826 0.00 0.00 41.28 3.72
745 816 2.817258 TGGCCAGCATTTGTACTGTTAC 59.183 45.455 0.00 0.00 31.76 2.50
748 819 1.888512 CTTGGCCAGCATTTGTACTGT 59.111 47.619 5.11 0.00 31.76 3.55
749 820 1.888512 ACTTGGCCAGCATTTGTACTG 59.111 47.619 5.11 0.00 0.00 2.74
760 831 0.171007 CCGCAATACAACTTGGCCAG 59.829 55.000 5.11 2.72 0.00 4.85
849 924 0.179032 TCCACGGCAAGTTGACACAT 60.179 50.000 9.92 0.00 0.00 3.21
883 958 1.552799 GGGGTCAAAATGGGGCTTGG 61.553 60.000 0.00 0.00 0.00 3.61
884 959 1.552799 GGGGGTCAAAATGGGGCTTG 61.553 60.000 0.00 0.00 0.00 4.01
888 963 1.552799 GCTTGGGGGTCAAAATGGGG 61.553 60.000 0.00 0.00 34.56 4.96
889 964 0.545071 AGCTTGGGGGTCAAAATGGG 60.545 55.000 0.00 0.00 34.56 4.00
968 1043 4.464244 AGGGTAGGAAGGAAACGTAACTAC 59.536 45.833 0.00 0.00 34.18 2.73
986 1061 4.124351 CGCGCGAGGACAAGGGTA 62.124 66.667 28.94 0.00 0.00 3.69
1012 1087 3.508762 CCATGGCGTCTATATAACGGAC 58.491 50.000 0.00 5.48 40.41 4.79
1013 1088 2.094390 GCCATGGCGTCTATATAACGGA 60.094 50.000 23.48 0.00 40.41 4.69
1073 3244 1.480545 GTGGGGAAAGAGAGAGAGAGC 59.519 57.143 0.00 0.00 0.00 4.09
1108 3287 0.461135 AACTTGTGGCTGTGCTTTGG 59.539 50.000 0.00 0.00 0.00 3.28
1109 3288 1.134753 TGAACTTGTGGCTGTGCTTTG 59.865 47.619 0.00 0.00 0.00 2.77
1110 3289 1.134946 GTGAACTTGTGGCTGTGCTTT 59.865 47.619 0.00 0.00 0.00 3.51
1111 3290 0.740737 GTGAACTTGTGGCTGTGCTT 59.259 50.000 0.00 0.00 0.00 3.91
1112 3291 1.439353 CGTGAACTTGTGGCTGTGCT 61.439 55.000 0.00 0.00 0.00 4.40
1113 3292 1.009675 CGTGAACTTGTGGCTGTGC 60.010 57.895 0.00 0.00 0.00 4.57
1114 3293 0.583438 CTCGTGAACTTGTGGCTGTG 59.417 55.000 0.00 0.00 0.00 3.66
1115 3294 1.160329 GCTCGTGAACTTGTGGCTGT 61.160 55.000 0.00 0.00 0.00 4.40
1116 3295 1.571460 GCTCGTGAACTTGTGGCTG 59.429 57.895 0.00 0.00 0.00 4.85
1139 3318 4.099170 CTCTGCTGCTTGCCGTGC 62.099 66.667 0.00 0.00 42.00 5.34
1166 3345 3.903783 GCAGAGCGTTGCCCATTA 58.096 55.556 4.36 0.00 38.13 1.90
1280 3460 1.903929 CGCGTCGTCTTCTTCATCG 59.096 57.895 0.00 0.00 0.00 3.84
1304 3484 1.153958 GACTTGCCGCCAATCTTGC 60.154 57.895 0.00 0.00 0.00 4.01
1429 3636 2.046892 CAGGAGCACCTTCACCCG 60.047 66.667 0.00 0.00 45.36 5.28
1446 3653 4.847444 GCCGCCTCCTCCTTGCTC 62.847 72.222 0.00 0.00 0.00 4.26
1602 3809 1.991099 GCACCTACGACGACTCCTCC 61.991 65.000 0.00 0.00 0.00 4.30
1661 3878 2.494059 CTGTTCTTCCCGCTTTCTCAA 58.506 47.619 0.00 0.00 0.00 3.02
1662 3879 1.878102 GCTGTTCTTCCCGCTTTCTCA 60.878 52.381 0.00 0.00 0.00 3.27
1667 3890 1.374758 CTCGCTGTTCTTCCCGCTT 60.375 57.895 0.00 0.00 0.00 4.68
1672 3895 0.038526 TCCGTTCTCGCTGTTCTTCC 60.039 55.000 0.00 0.00 35.54 3.46
1685 3908 0.748367 GCCCAAATCTCCCTCCGTTC 60.748 60.000 0.00 0.00 0.00 3.95
1771 3994 5.056480 GCTATATACACACACCAGCATCAA 58.944 41.667 0.00 0.00 0.00 2.57
1774 3997 4.635223 CTGCTATATACACACACCAGCAT 58.365 43.478 0.00 0.00 36.98 3.79
1777 4000 4.327982 AGCTGCTATATACACACACCAG 57.672 45.455 0.00 0.00 0.00 4.00
1778 4001 4.442893 GGAAGCTGCTATATACACACACCA 60.443 45.833 0.90 0.00 0.00 4.17
1779 4002 4.058817 GGAAGCTGCTATATACACACACC 58.941 47.826 0.90 0.00 0.00 4.16
1853 4077 1.751351 TGATCGAGGGAGCAGTACAAG 59.249 52.381 0.00 0.00 32.73 3.16
1854 4078 1.476891 GTGATCGAGGGAGCAGTACAA 59.523 52.381 0.00 0.00 39.65 2.41
1855 4079 1.103803 GTGATCGAGGGAGCAGTACA 58.896 55.000 0.00 0.00 39.65 2.90
1914 4138 4.512944 ACACATGGATTAGCACGAATGATC 59.487 41.667 0.00 0.00 0.00 2.92
1938 4162 3.721035 GCACAGCCAACTCAAAAGAAAT 58.279 40.909 0.00 0.00 0.00 2.17
1942 4166 0.381801 ACGCACAGCCAACTCAAAAG 59.618 50.000 0.00 0.00 0.00 2.27
1947 4177 0.663153 AGAAAACGCACAGCCAACTC 59.337 50.000 0.00 0.00 0.00 3.01
1952 4182 1.135944 GCTAGAAGAAAACGCACAGCC 60.136 52.381 0.00 0.00 0.00 4.85
1954 4184 3.494626 TCTTGCTAGAAGAAAACGCACAG 59.505 43.478 0.00 0.00 0.00 3.66
1959 4189 7.009265 TCGTCATTATCTTGCTAGAAGAAAACG 59.991 37.037 17.56 17.56 33.20 3.60
2003 4249 4.837972 ACAGAGAAAGAAAGGCCAGATAC 58.162 43.478 5.01 0.00 0.00 2.24
2044 4290 2.736144 TGTTTCCAGTACGTAGCCAG 57.264 50.000 0.00 0.00 0.00 4.85
2059 4305 7.812648 TCGATCATCCGTTTAGAAAAATGTTT 58.187 30.769 0.00 0.00 30.85 2.83
2074 4325 1.337541 ACCATCTGCATCGATCATCCG 60.338 52.381 0.00 0.00 0.00 4.18
2100 4351 3.769739 ATGTGGTGTGATGTGTAGTGT 57.230 42.857 0.00 0.00 0.00 3.55
2102 4353 4.887071 ACAAAATGTGGTGTGATGTGTAGT 59.113 37.500 0.00 0.00 0.00 2.73
2107 4358 4.159321 TGTGAACAAAATGTGGTGTGATGT 59.841 37.500 0.00 0.00 0.00 3.06
2115 4366 3.004210 TCGTGGATGTGAACAAAATGTGG 59.996 43.478 0.00 0.00 0.00 4.17
2133 4390 4.801147 ATATGCTGTGTAATGCTTCGTG 57.199 40.909 0.00 0.00 0.00 4.35
2134 4391 5.818136 AAATATGCTGTGTAATGCTTCGT 57.182 34.783 0.00 0.00 0.00 3.85
2150 4407 7.277098 CCTCTCCATTGTTTTCTGCAAAATATG 59.723 37.037 0.00 0.00 33.98 1.78
2151 4408 7.178983 TCCTCTCCATTGTTTTCTGCAAAATAT 59.821 33.333 0.00 0.00 33.98 1.28
2152 4409 6.493115 TCCTCTCCATTGTTTTCTGCAAAATA 59.507 34.615 0.00 0.00 33.98 1.40
2153 4410 5.305128 TCCTCTCCATTGTTTTCTGCAAAAT 59.695 36.000 0.00 0.00 33.98 1.82
2158 4432 3.366781 GCTTCCTCTCCATTGTTTTCTGC 60.367 47.826 0.00 0.00 0.00 4.26
2171 4445 0.101399 TCGATCGCAAGCTTCCTCTC 59.899 55.000 11.09 0.00 37.18 3.20
2182 4456 2.815211 GCAGCAACCTCGATCGCA 60.815 61.111 11.09 0.00 0.00 5.10
2188 4462 2.048222 TTCGGAGCAGCAACCTCG 60.048 61.111 0.00 0.00 0.00 4.63
2189 4463 1.743252 CCTTCGGAGCAGCAACCTC 60.743 63.158 0.00 0.00 0.00 3.85
2190 4464 2.348998 CCTTCGGAGCAGCAACCT 59.651 61.111 0.00 0.00 0.00 3.50
2234 4518 3.115554 GGCCGCTGCATTATTAAGTTTG 58.884 45.455 1.55 0.00 40.13 2.93
2279 4563 1.416049 CAATCCGTCGCACGAGTTG 59.584 57.895 9.75 9.62 46.05 3.16
2340 4629 5.128499 AGAGAGAGAGAGAGAGAGAGAACAG 59.872 48.000 0.00 0.00 0.00 3.16
2344 4633 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2359 4648 1.143684 AGGCCTAGCAGAGAGAGAGAG 59.856 57.143 1.29 0.00 0.00 3.20
2360 4649 1.221635 AGGCCTAGCAGAGAGAGAGA 58.778 55.000 1.29 0.00 0.00 3.10
2361 4650 2.553028 CCTAGGCCTAGCAGAGAGAGAG 60.553 59.091 31.33 11.94 31.95 3.20
2422 4711 7.634526 AAAAAGGGATTTGTTGGGGTTTATA 57.365 32.000 0.00 0.00 0.00 0.98
2423 4712 6.523035 AAAAAGGGATTTGTTGGGGTTTAT 57.477 33.333 0.00 0.00 0.00 1.40
2428 4717 5.816955 TTCTAAAAAGGGATTTGTTGGGG 57.183 39.130 0.00 0.00 0.00 4.96
2507 4803 1.732405 GCGCCCTGCACTTGTTTATTC 60.732 52.381 0.00 0.00 45.45 1.75
2533 4829 3.692101 CCACAACTCAACCACAACACTAA 59.308 43.478 0.00 0.00 0.00 2.24
2571 4867 5.991568 TCTCAATAAACAACATTTTCGCGA 58.008 33.333 3.71 3.71 0.00 5.87
2591 4887 7.781763 CACAAAACGTGGAAAAATATCTCTC 57.218 36.000 0.00 0.00 42.34 3.20
2629 4925 5.745294 ACGCACATTCATTTTGCTCAATATC 59.255 36.000 0.00 0.00 33.90 1.63
2630 4926 5.653507 ACGCACATTCATTTTGCTCAATAT 58.346 33.333 0.00 0.00 33.90 1.28
2631 4927 5.058149 ACGCACATTCATTTTGCTCAATA 57.942 34.783 0.00 0.00 33.90 1.90
2632 4928 3.916761 ACGCACATTCATTTTGCTCAAT 58.083 36.364 0.00 0.00 33.90 2.57
2676 4976 9.880157 GTAGATACTTTAACCAACCAATCTACA 57.120 33.333 12.09 0.00 41.79 2.74
2677 4977 9.028185 CGTAGATACTTTAACCAACCAATCTAC 57.972 37.037 0.00 0.00 40.12 2.59
2678 4978 8.199449 CCGTAGATACTTTAACCAACCAATCTA 58.801 37.037 0.00 0.00 0.00 1.98
2679 4979 7.046033 CCGTAGATACTTTAACCAACCAATCT 58.954 38.462 0.00 0.00 0.00 2.40
2680 4980 6.238293 GCCGTAGATACTTTAACCAACCAATC 60.238 42.308 0.00 0.00 0.00 2.67
2681 4981 5.587443 GCCGTAGATACTTTAACCAACCAAT 59.413 40.000 0.00 0.00 0.00 3.16
2682 4982 4.937015 GCCGTAGATACTTTAACCAACCAA 59.063 41.667 0.00 0.00 0.00 3.67
2683 4983 4.506758 GCCGTAGATACTTTAACCAACCA 58.493 43.478 0.00 0.00 0.00 3.67
2684 4984 3.873361 GGCCGTAGATACTTTAACCAACC 59.127 47.826 0.00 0.00 0.00 3.77
2685 4985 4.506758 TGGCCGTAGATACTTTAACCAAC 58.493 43.478 0.00 0.00 0.00 3.77
2686 4986 4.467082 TCTGGCCGTAGATACTTTAACCAA 59.533 41.667 0.00 0.00 0.00 3.67
2687 4987 4.025360 TCTGGCCGTAGATACTTTAACCA 58.975 43.478 0.00 0.00 0.00 3.67
2688 4988 4.099113 AGTCTGGCCGTAGATACTTTAACC 59.901 45.833 0.00 0.00 0.00 2.85
2689 4989 5.259832 AGTCTGGCCGTAGATACTTTAAC 57.740 43.478 0.00 0.00 0.00 2.01
2690 4990 5.449588 CGAAGTCTGGCCGTAGATACTTTAA 60.450 44.000 0.00 0.00 0.00 1.52
2691 4991 4.036027 CGAAGTCTGGCCGTAGATACTTTA 59.964 45.833 0.00 0.00 0.00 1.85
2692 4992 3.181489 CGAAGTCTGGCCGTAGATACTTT 60.181 47.826 0.00 0.00 0.00 2.66
2693 4993 2.358267 CGAAGTCTGGCCGTAGATACTT 59.642 50.000 0.00 0.93 0.00 2.24
2694 4994 1.948145 CGAAGTCTGGCCGTAGATACT 59.052 52.381 0.00 0.00 0.00 2.12
2695 4995 1.599916 GCGAAGTCTGGCCGTAGATAC 60.600 57.143 0.00 0.00 0.00 2.24
2696 4996 0.666913 GCGAAGTCTGGCCGTAGATA 59.333 55.000 0.00 0.00 0.00 1.98
2697 4997 1.320344 TGCGAAGTCTGGCCGTAGAT 61.320 55.000 0.00 0.00 0.00 1.98
2698 4998 1.529152 TTGCGAAGTCTGGCCGTAGA 61.529 55.000 0.00 0.00 0.00 2.59
2699 4999 0.669318 TTTGCGAAGTCTGGCCGTAG 60.669 55.000 0.00 0.00 0.00 3.51
2700 5000 0.036765 ATTTGCGAAGTCTGGCCGTA 60.037 50.000 0.00 0.00 0.00 4.02
2701 5001 1.298859 GATTTGCGAAGTCTGGCCGT 61.299 55.000 0.00 0.00 0.00 5.68
2702 5002 1.425428 GATTTGCGAAGTCTGGCCG 59.575 57.895 0.00 0.00 0.00 6.13
2703 5003 0.960364 TGGATTTGCGAAGTCTGGCC 60.960 55.000 0.00 0.00 0.00 5.36
2704 5004 0.449388 CTGGATTTGCGAAGTCTGGC 59.551 55.000 0.00 0.00 0.00 4.85
2705 5005 0.449388 GCTGGATTTGCGAAGTCTGG 59.551 55.000 0.00 0.00 0.00 3.86
2706 5006 1.396301 GAGCTGGATTTGCGAAGTCTG 59.604 52.381 0.00 0.00 35.28 3.51
2707 5007 1.277557 AGAGCTGGATTTGCGAAGTCT 59.722 47.619 0.00 0.00 35.28 3.24
2708 5008 1.731720 AGAGCTGGATTTGCGAAGTC 58.268 50.000 0.00 0.00 35.28 3.01
2709 5009 2.191128 AAGAGCTGGATTTGCGAAGT 57.809 45.000 0.00 0.00 35.28 3.01
2710 5010 4.889832 ATAAAGAGCTGGATTTGCGAAG 57.110 40.909 0.00 0.00 35.28 3.79
2711 5011 4.270084 CGTATAAAGAGCTGGATTTGCGAA 59.730 41.667 0.00 0.00 35.28 4.70
2712 5012 3.802139 CGTATAAAGAGCTGGATTTGCGA 59.198 43.478 0.00 0.00 35.28 5.10
2713 5013 3.604772 GCGTATAAAGAGCTGGATTTGCG 60.605 47.826 0.00 0.00 35.28 4.85
2714 5014 3.304057 GGCGTATAAAGAGCTGGATTTGC 60.304 47.826 0.00 0.00 0.00 3.68
2715 5015 4.130118 AGGCGTATAAAGAGCTGGATTTG 58.870 43.478 0.00 0.00 0.00 2.32
2716 5016 4.381411 GAGGCGTATAAAGAGCTGGATTT 58.619 43.478 0.00 0.00 0.00 2.17
2717 5017 3.553096 CGAGGCGTATAAAGAGCTGGATT 60.553 47.826 0.00 0.00 0.00 3.01
2718 5018 2.029828 CGAGGCGTATAAAGAGCTGGAT 60.030 50.000 0.00 0.00 0.00 3.41
2719 5019 1.337071 CGAGGCGTATAAAGAGCTGGA 59.663 52.381 0.00 0.00 0.00 3.86
2720 5020 1.603172 CCGAGGCGTATAAAGAGCTGG 60.603 57.143 0.00 0.00 0.00 4.85
2721 5021 1.603172 CCCGAGGCGTATAAAGAGCTG 60.603 57.143 0.00 0.00 0.00 4.24
2722 5022 0.674534 CCCGAGGCGTATAAAGAGCT 59.325 55.000 0.00 0.00 0.00 4.09
2723 5023 0.944788 GCCCGAGGCGTATAAAGAGC 60.945 60.000 0.00 0.00 39.62 4.09
2724 5024 3.196613 GCCCGAGGCGTATAAAGAG 57.803 57.895 0.00 0.00 39.62 2.85
2750 5050 4.899239 GATCGCGGGGGCTGTCTG 62.899 72.222 6.13 0.00 0.00 3.51
2757 5057 1.990060 ATATGAGGGATCGCGGGGG 60.990 63.158 6.13 0.00 0.00 5.40
2758 5058 1.219124 CATATGAGGGATCGCGGGG 59.781 63.158 6.13 0.00 0.00 5.73
2759 5059 1.219124 CCATATGAGGGATCGCGGG 59.781 63.158 6.13 0.00 0.00 6.13
2760 5060 4.919653 CCATATGAGGGATCGCGG 57.080 61.111 6.13 0.00 0.00 6.46
2761 5061 1.892819 AGCCCATATGAGGGATCGCG 61.893 60.000 3.65 0.00 46.77 5.87
2762 5062 0.392193 CAGCCCATATGAGGGATCGC 60.392 60.000 3.65 0.54 46.77 4.58
2763 5063 0.392193 GCAGCCCATATGAGGGATCG 60.392 60.000 3.65 0.00 46.77 3.69
2764 5064 0.990374 AGCAGCCCATATGAGGGATC 59.010 55.000 3.65 0.00 46.77 3.36
2768 5068 1.417517 TGTGTAGCAGCCCATATGAGG 59.582 52.381 3.65 5.08 0.00 3.86
2769 5069 2.916702 TGTGTAGCAGCCCATATGAG 57.083 50.000 3.65 0.00 0.00 2.90
2770 5070 3.136260 TGAATGTGTAGCAGCCCATATGA 59.864 43.478 3.65 0.00 0.00 2.15
2771 5071 3.479489 TGAATGTGTAGCAGCCCATATG 58.521 45.455 0.00 0.00 0.00 1.78
2772 5072 3.862877 TGAATGTGTAGCAGCCCATAT 57.137 42.857 0.00 0.00 0.00 1.78
2773 5073 3.862877 ATGAATGTGTAGCAGCCCATA 57.137 42.857 0.00 0.00 0.00 2.74
2774 5074 2.742428 ATGAATGTGTAGCAGCCCAT 57.258 45.000 0.00 0.00 0.00 4.00
2775 5075 3.117926 ACATATGAATGTGTAGCAGCCCA 60.118 43.478 10.38 0.00 44.79 5.36
2776 5076 3.480470 ACATATGAATGTGTAGCAGCCC 58.520 45.455 10.38 0.00 44.79 5.19
2777 5077 5.505173 AAACATATGAATGTGTAGCAGCC 57.495 39.130 10.38 0.00 45.79 4.85
2778 5078 8.909708 TTTAAAACATATGAATGTGTAGCAGC 57.090 30.769 10.38 0.00 45.79 5.25
2780 5080 9.299963 GCATTTAAAACATATGAATGTGTAGCA 57.700 29.630 10.38 0.00 45.79 3.49
2781 5081 8.471457 CGCATTTAAAACATATGAATGTGTAGC 58.529 33.333 10.38 4.49 45.79 3.58
2782 5082 8.957028 CCGCATTTAAAACATATGAATGTGTAG 58.043 33.333 10.38 0.71 45.79 2.74
2783 5083 8.678199 TCCGCATTTAAAACATATGAATGTGTA 58.322 29.630 10.38 0.00 45.79 2.90
2784 5084 7.542890 TCCGCATTTAAAACATATGAATGTGT 58.457 30.769 10.38 0.00 45.79 3.72
2785 5085 7.306167 GCTCCGCATTTAAAACATATGAATGTG 60.306 37.037 10.38 13.77 45.79 3.21
2787 5087 6.144402 GGCTCCGCATTTAAAACATATGAATG 59.856 38.462 10.38 9.43 39.17 2.67
2788 5088 6.040842 AGGCTCCGCATTTAAAACATATGAAT 59.959 34.615 10.38 0.00 0.00 2.57
2789 5089 5.359576 AGGCTCCGCATTTAAAACATATGAA 59.640 36.000 10.38 0.00 0.00 2.57
2790 5090 4.887071 AGGCTCCGCATTTAAAACATATGA 59.113 37.500 10.38 0.00 0.00 2.15
2791 5091 5.186996 AGGCTCCGCATTTAAAACATATG 57.813 39.130 0.00 0.00 0.00 1.78
2792 5092 4.887071 TGAGGCTCCGCATTTAAAACATAT 59.113 37.500 12.86 0.00 0.00 1.78
2793 5093 4.265893 TGAGGCTCCGCATTTAAAACATA 58.734 39.130 12.86 0.00 0.00 2.29
2794 5094 3.088532 TGAGGCTCCGCATTTAAAACAT 58.911 40.909 12.86 0.00 0.00 2.71
2795 5095 2.509569 TGAGGCTCCGCATTTAAAACA 58.490 42.857 12.86 0.00 0.00 2.83
2796 5096 3.569250 TTGAGGCTCCGCATTTAAAAC 57.431 42.857 12.86 0.00 0.00 2.43
2797 5097 4.462483 AGATTTGAGGCTCCGCATTTAAAA 59.538 37.500 12.86 3.46 0.00 1.52
2798 5098 4.016444 AGATTTGAGGCTCCGCATTTAAA 58.984 39.130 12.86 4.22 0.00 1.52
2799 5099 3.620488 AGATTTGAGGCTCCGCATTTAA 58.380 40.909 12.86 0.00 0.00 1.52
2800 5100 3.281727 AGATTTGAGGCTCCGCATTTA 57.718 42.857 12.86 0.00 0.00 1.40
2801 5101 2.134789 AGATTTGAGGCTCCGCATTT 57.865 45.000 12.86 0.00 0.00 2.32
2802 5102 3.498774 ATAGATTTGAGGCTCCGCATT 57.501 42.857 12.86 0.00 0.00 3.56
2803 5103 3.324846 TGTATAGATTTGAGGCTCCGCAT 59.675 43.478 12.86 0.66 0.00 4.73
2804 5104 2.698274 TGTATAGATTTGAGGCTCCGCA 59.302 45.455 12.86 0.00 0.00 5.69
2805 5105 3.386768 TGTATAGATTTGAGGCTCCGC 57.613 47.619 12.86 0.00 0.00 5.54
2806 5106 4.887748 ACATGTATAGATTTGAGGCTCCG 58.112 43.478 12.86 0.00 0.00 4.63
2807 5107 5.858381 TGACATGTATAGATTTGAGGCTCC 58.142 41.667 12.86 0.00 0.00 4.70
2808 5108 7.658982 TGATTGACATGTATAGATTTGAGGCTC 59.341 37.037 7.79 7.79 0.00 4.70
2809 5109 7.512130 TGATTGACATGTATAGATTTGAGGCT 58.488 34.615 0.00 0.00 0.00 4.58
2810 5110 7.734924 TGATTGACATGTATAGATTTGAGGC 57.265 36.000 0.00 0.00 0.00 4.70
2823 5123 8.892723 ACAATTTGTATCGTATGATTGACATGT 58.107 29.630 0.00 0.00 39.77 3.21
2824 5124 9.373750 GACAATTTGTATCGTATGATTGACATG 57.626 33.333 2.02 1.43 39.77 3.21
2825 5125 8.559536 GGACAATTTGTATCGTATGATTGACAT 58.440 33.333 2.02 0.00 42.39 3.06
2826 5126 7.254286 CGGACAATTTGTATCGTATGATTGACA 60.254 37.037 2.02 0.00 35.99 3.58
2827 5127 7.042992 TCGGACAATTTGTATCGTATGATTGAC 60.043 37.037 18.07 0.00 35.99 3.18
2828 5128 6.981559 TCGGACAATTTGTATCGTATGATTGA 59.018 34.615 18.07 0.00 35.99 2.57
2829 5129 7.172654 TCGGACAATTTGTATCGTATGATTG 57.827 36.000 18.07 0.00 35.99 2.67
2830 5130 7.780008 TTCGGACAATTTGTATCGTATGATT 57.220 32.000 18.07 0.00 35.99 2.57
2831 5131 7.962964 ATTCGGACAATTTGTATCGTATGAT 57.037 32.000 18.07 2.37 38.67 2.45
2832 5132 7.492994 TGAATTCGGACAATTTGTATCGTATGA 59.507 33.333 18.07 0.00 31.94 2.15
2833 5133 7.626446 TGAATTCGGACAATTTGTATCGTATG 58.374 34.615 18.07 1.01 31.94 2.39
2834 5134 7.780008 TGAATTCGGACAATTTGTATCGTAT 57.220 32.000 18.07 13.74 31.94 3.06
2835 5135 7.598189 TTGAATTCGGACAATTTGTATCGTA 57.402 32.000 18.07 12.52 31.94 3.43
2836 5136 6.489127 TTGAATTCGGACAATTTGTATCGT 57.511 33.333 18.07 5.76 31.94 3.73
2837 5137 8.335356 ACTATTGAATTCGGACAATTTGTATCG 58.665 33.333 14.68 14.68 37.75 2.92
2875 5175 9.801873 CGGGATTGTTGAACTATGATTTTATTT 57.198 29.630 0.00 0.00 0.00 1.40
2876 5176 9.184523 TCGGGATTGTTGAACTATGATTTTATT 57.815 29.630 0.00 0.00 0.00 1.40
2877 5177 8.621286 GTCGGGATTGTTGAACTATGATTTTAT 58.379 33.333 0.00 0.00 0.00 1.40
2878 5178 7.608376 TGTCGGGATTGTTGAACTATGATTTTA 59.392 33.333 0.00 0.00 0.00 1.52
2879 5179 6.432783 TGTCGGGATTGTTGAACTATGATTTT 59.567 34.615 0.00 0.00 0.00 1.82
2880 5180 5.943416 TGTCGGGATTGTTGAACTATGATTT 59.057 36.000 0.00 0.00 0.00 2.17
2881 5181 5.496556 TGTCGGGATTGTTGAACTATGATT 58.503 37.500 0.00 0.00 0.00 2.57
2882 5182 5.097742 TGTCGGGATTGTTGAACTATGAT 57.902 39.130 0.00 0.00 0.00 2.45
2883 5183 4.545208 TGTCGGGATTGTTGAACTATGA 57.455 40.909 0.00 0.00 0.00 2.15
2884 5184 4.496341 GCATGTCGGGATTGTTGAACTATG 60.496 45.833 0.00 0.00 0.00 2.23
2885 5185 3.627577 GCATGTCGGGATTGTTGAACTAT 59.372 43.478 0.00 0.00 0.00 2.12
2886 5186 3.006940 GCATGTCGGGATTGTTGAACTA 58.993 45.455 0.00 0.00 0.00 2.24
2887 5187 1.812571 GCATGTCGGGATTGTTGAACT 59.187 47.619 0.00 0.00 0.00 3.01
2888 5188 1.135402 GGCATGTCGGGATTGTTGAAC 60.135 52.381 0.00 0.00 0.00 3.18
2889 5189 1.173043 GGCATGTCGGGATTGTTGAA 58.827 50.000 0.00 0.00 0.00 2.69
2890 5190 0.037447 TGGCATGTCGGGATTGTTGA 59.963 50.000 0.00 0.00 0.00 3.18
2891 5191 0.887247 TTGGCATGTCGGGATTGTTG 59.113 50.000 0.00 0.00 0.00 3.33
2892 5192 1.626686 TTTGGCATGTCGGGATTGTT 58.373 45.000 0.00 0.00 0.00 2.83
2893 5193 1.626686 TTTTGGCATGTCGGGATTGT 58.373 45.000 0.00 0.00 0.00 2.71
2894 5194 2.166050 TCATTTTGGCATGTCGGGATTG 59.834 45.455 0.00 0.00 0.00 2.67
2895 5195 2.455557 TCATTTTGGCATGTCGGGATT 58.544 42.857 0.00 0.00 0.00 3.01
2896 5196 2.142356 TCATTTTGGCATGTCGGGAT 57.858 45.000 0.00 0.00 0.00 3.85
2897 5197 1.916506 TTCATTTTGGCATGTCGGGA 58.083 45.000 0.00 0.00 0.00 5.14
2898 5198 2.739885 TTTCATTTTGGCATGTCGGG 57.260 45.000 0.00 0.00 0.00 5.14
2899 5199 6.907206 ATTTATTTCATTTTGGCATGTCGG 57.093 33.333 0.00 0.00 0.00 4.79
2919 5219 8.027189 CGAGGCATTCATCATGATCAAATATTT 58.973 33.333 4.86 0.00 34.31 1.40
2920 5220 7.535997 CGAGGCATTCATCATGATCAAATATT 58.464 34.615 4.86 0.00 34.31 1.28
2921 5221 6.404403 GCGAGGCATTCATCATGATCAAATAT 60.404 38.462 4.86 0.00 34.31 1.28
2922 5222 5.106436 GCGAGGCATTCATCATGATCAAATA 60.106 40.000 4.86 0.00 34.31 1.40
2923 5223 4.321008 GCGAGGCATTCATCATGATCAAAT 60.321 41.667 4.86 6.15 34.31 2.32
2924 5224 3.004002 GCGAGGCATTCATCATGATCAAA 59.996 43.478 4.86 3.86 34.31 2.69
2925 5225 2.551032 GCGAGGCATTCATCATGATCAA 59.449 45.455 4.86 0.00 34.31 2.57
2926 5226 2.148768 GCGAGGCATTCATCATGATCA 58.851 47.619 4.86 0.00 34.31 2.92
2927 5227 2.424557 AGCGAGGCATTCATCATGATC 58.575 47.619 4.86 0.00 34.31 2.92
2928 5228 2.552743 CAAGCGAGGCATTCATCATGAT 59.447 45.455 1.18 1.18 34.31 2.45
2929 5229 1.944709 CAAGCGAGGCATTCATCATGA 59.055 47.619 0.00 0.00 34.31 3.07
2930 5230 1.599667 GCAAGCGAGGCATTCATCATG 60.600 52.381 0.00 0.00 35.73 3.07
2931 5231 0.666913 GCAAGCGAGGCATTCATCAT 59.333 50.000 0.00 0.00 0.00 2.45
2932 5232 0.393402 AGCAAGCGAGGCATTCATCA 60.393 50.000 0.00 0.00 0.00 3.07
2933 5233 1.530293 CTAGCAAGCGAGGCATTCATC 59.470 52.381 0.00 0.00 0.00 2.92
2934 5234 1.590932 CTAGCAAGCGAGGCATTCAT 58.409 50.000 0.00 0.00 0.00 2.57
2935 5235 1.091771 GCTAGCAAGCGAGGCATTCA 61.092 55.000 10.63 0.00 39.39 2.57
2936 5236 1.645997 GCTAGCAAGCGAGGCATTC 59.354 57.895 10.63 0.00 39.39 2.67
2937 5237 3.819188 GCTAGCAAGCGAGGCATT 58.181 55.556 10.63 0.00 39.39 3.56
2946 5246 0.596083 CGAGTGATCCGGCTAGCAAG 60.596 60.000 18.24 9.78 0.00 4.01
2947 5247 1.320344 ACGAGTGATCCGGCTAGCAA 61.320 55.000 18.24 1.14 0.00 3.91
2948 5248 1.725557 GACGAGTGATCCGGCTAGCA 61.726 60.000 18.24 0.00 31.20 3.49
2949 5249 1.008309 GACGAGTGATCCGGCTAGC 60.008 63.158 6.04 6.04 31.20 3.42
2950 5250 1.280142 CGACGAGTGATCCGGCTAG 59.720 63.158 0.00 0.00 31.81 3.42
2951 5251 2.184830 CCGACGAGTGATCCGGCTA 61.185 63.158 0.00 0.00 35.29 3.93
2952 5252 3.518998 CCGACGAGTGATCCGGCT 61.519 66.667 0.00 0.00 35.29 5.52
2953 5253 3.515286 TCCGACGAGTGATCCGGC 61.515 66.667 0.00 0.00 41.55 6.13
2954 5254 2.408022 GTCCGACGAGTGATCCGG 59.592 66.667 0.00 0.00 43.02 5.14
2955 5255 2.022902 CGTCCGACGAGTGATCCG 59.977 66.667 16.03 0.00 46.05 4.18
2956 5256 2.278013 GCGTCCGACGAGTGATCC 60.278 66.667 24.78 0.88 46.05 3.36
2957 5257 2.278013 GGCGTCCGACGAGTGATC 60.278 66.667 24.78 5.32 46.05 2.92
2958 5258 3.823330 GGGCGTCCGACGAGTGAT 61.823 66.667 24.78 0.00 46.05 3.06
2960 5260 4.477975 GAGGGCGTCCGACGAGTG 62.478 72.222 24.78 0.00 46.05 3.51
2981 5281 2.435059 GGTCTCGAAGCAGGTGGC 60.435 66.667 0.00 0.00 45.30 5.01
2982 5282 0.460987 GATGGTCTCGAAGCAGGTGG 60.461 60.000 5.88 0.00 39.11 4.61
2983 5283 0.460987 GGATGGTCTCGAAGCAGGTG 60.461 60.000 5.88 0.00 39.11 4.00
2984 5284 0.616111 AGGATGGTCTCGAAGCAGGT 60.616 55.000 5.88 0.00 39.11 4.00
2985 5285 0.539051 AAGGATGGTCTCGAAGCAGG 59.461 55.000 5.88 0.00 39.11 4.85
2986 5286 1.649664 CAAGGATGGTCTCGAAGCAG 58.350 55.000 5.88 0.00 39.11 4.24
2987 5287 0.391661 GCAAGGATGGTCTCGAAGCA 60.392 55.000 2.78 2.78 40.26 3.91
2988 5288 0.107945 AGCAAGGATGGTCTCGAAGC 60.108 55.000 0.00 0.00 29.35 3.86
2989 5289 2.005451 CAAGCAAGGATGGTCTCGAAG 58.995 52.381 0.00 0.00 35.91 3.79
2990 5290 1.945819 GCAAGCAAGGATGGTCTCGAA 60.946 52.381 0.00 0.00 35.91 3.71
2991 5291 0.391661 GCAAGCAAGGATGGTCTCGA 60.392 55.000 0.00 0.00 35.91 4.04
2992 5292 0.392193 AGCAAGCAAGGATGGTCTCG 60.392 55.000 0.00 0.00 35.91 4.04
2993 5293 1.093159 CAGCAAGCAAGGATGGTCTC 58.907 55.000 0.00 0.00 35.91 3.36
2994 5294 0.964358 GCAGCAAGCAAGGATGGTCT 60.964 55.000 0.00 0.00 44.79 3.85
2995 5295 1.509923 GCAGCAAGCAAGGATGGTC 59.490 57.895 0.00 0.00 44.79 4.02
2996 5296 3.690745 GCAGCAAGCAAGGATGGT 58.309 55.556 0.00 0.00 44.79 3.55
3013 5313 4.478371 TGGAGCATGCAGGCGGAG 62.478 66.667 21.98 0.00 39.27 4.63
3014 5314 4.783621 GTGGAGCATGCAGGCGGA 62.784 66.667 21.98 2.53 36.81 5.54
3016 5316 4.790962 AGGTGGAGCATGCAGGCG 62.791 66.667 21.98 0.00 36.81 5.52
3017 5317 3.138798 CAGGTGGAGCATGCAGGC 61.139 66.667 21.98 17.09 36.81 4.85
3025 5325 3.915575 CAAGGATGCAGGTGGAGC 58.084 61.111 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.