>input_sequence_62219
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----------------------------------CGCGGCTGTGCCGTCCG-----------------------------
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--------------------------------------------------TTATATAGACGCCATGGCTGTCACCACCAG
GCGGCCATTGGCACTGCTCATCT-----------------CTCGCTC--TCTCTCTCTTTCCCCACCTCTGCTCACG---
---CACCCAAAGCACAGCCACAAGTTCACGAGCCGGCGCACGGCAAGCAGCAGAGAGACGAGAGT-AATGGGCAACGCTC
TGCCGTGCTTGGTCGACCAGGGCGTGAAGGCTCTGCCGGCGGCGGCGAAGCCCAGGCGGAGGATGTACTCGCTCCAGCTT
CTCATGAAGGTCCTCCACACGATGAAGAAGACGACGCGCGGCAGCAAGATTGGCGGCAAGTCCTCGCCGGAATCC-----
-GAAGTAGGTGGGGCGGGCGTGAAGAGCAT---------------CAAGGCCTCCCCGAGACGAGCGGC------GGCAG
GTCGTGGTGGCGGTGGCCAGAGGAAGGGCGTCGTGCGGGTGAAGGTGCTCCTGAGCAAGGAGGAGGCGGCGCGGCTGCTG
TCGCTGACCGTCGGGGGCCAGAAGACGGCGGCGCAGATCGTGGCCGAGATCAAGAGGATGGAGGCGCGCCGCGCCGCCGC
CAATGCCGCCGCGGCGGCCGGGTGGCGGCCCGCGCTGGCGAGCATCCCGGAGGAGTCGTCGTAGGT-------GCACCGT
GCACGTACGTGTGTTATCATGT---AGCGTCGTGTCCTT------GAGAAAGCGGGAAGAACAGCGAGAACGGAGGGAGA
TTTGGGCTGAGAGGCGAGCAGGCGACGCCGGAAGCTCCCCCTCCCATGCATCATCCGTATGCTGATGCTGATGTTGATGC
TGGTGTGTGTATATAGCAGCTTCCCTATTTTGAAGCTTCTCTTCTGCTCCC-CCATGCTGTTCATCCCGATCGCTTCTTG
TACTGCTCCCTCGATCACCATCCCAAAGAAATGGAATGAAATTTCGTTTTCTTCGTAGATCATTCGTGCTAATCCATGTG
TATTTC------TTTTGAGTTGGCTGTGCGTTTTCTTCTAGCAA-GATAATGACGAACATTATTTCAGAT----------
-----TAAGTATCTGGCCTTTCTTTCTCTGTCAGCACGCACTGACAGAACTGGC--------------------------
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--------------------------------------------------------------------
>chr3A_1_TraesCS3A01G144100
GCTTAAAGCAGGCGCGGTGCAGCAAGGATCACTGGTAATTTTTCTTCCTTGGAAAGCTGCTGTTCGTGCGCAGTGGAGCT
TTAAGCTGGTTGTTGTGTTGAGAGCTTCAAGTTCTG-AAGTCTGAACTCGCAGCTGCAGACTGATTTCTCCATC------
--------------------------------------------AACTGGGCATGGCAATTCTGAAAGGCGCAAACTTGT
CATACCGAATCGGCTCGTTCCCCCGGCCCTCTTCGCCAGCGCCAAATGCTATACGTATCTAGACAACAAATGTAAGACAA
GTAATTTGAGACGGATGTAATACTAATTTGGAGCCCGAAATGCTGCACACGTTCCGGTTACCACTCACGTGGTTAGGCAA
ATCAGCAACAGCACCCACCTCTGTCCGCATGCACCTGGATCCTAGCGGCCGGGCTCAAGCAGAGTAGCTGTGATCTACTT
GTTCCGCGACCCAGCCAGCCTGATCCTCCCCACTCTCCAGGGTCTCTG-----CTCCATTGGACTAGTTGGAATCCCGCA
CATGATGCAATGGACGGCCTACTCCGGTCCAGGCTCAAGTACAAGATTATTATCCTGGTCACGATAACCCGTATTTTCAG
TCGCCTTTCCACCCCACGGCGTCTCCTTTTCCCGC----------AGAAACGTAGTCATCCACGAACCCTATGCGCATGT
CACCGCCCACAAAACTCCATGCAACACCCACTTTGATCAAGTGCCATCACA----CACACATGTTCCTCTCCTTTCCGAA
TAAATAACAAGTGATGTAACAGTACAAATGCTGGCCAAGTTG---TATTGCGGTACGCAGCATGCATGTGCCGACTTTGC
TTTGATGTGATTAGTTTTGGTTTGTGCAGTGGTAG-TAATAATATGTGTCAACTTGCCGTGGACAAGTGCTAACTGTCCA
AGCCCCATTTTGACCCCCAAGCTCTTGCAGCAAATGCTGTCCATTGGGCAGTGCAACCTACTCCTCACGTACTATATTCT
ACGTAGTTACGTTTCCTTCCTACCCTTGTCCTCGCGCGGCTGTGCCGTCCG-----------------------------
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--------------------------------------------------TTATATAGACGCCATGGCTGTCACCACCAG
GCGGCCATTGGCACTGCTCATCT-----------------CTCGCTC--TCTCTCTCTTTCCCCACCTCTGCTCACG---
---CACCCAAAGCACAGCCACAAGTTCACGAGCCGGCGCACGGCAAGCAGCAGAGAGACGAGAGT-AATGGGCAACGCTC
TGCCGTGCTTGGTCGACCAGGGCGTGAAGGCTCTGCCGGCGGCGGCGAAGCCCAGGCGGAGGATGTACTCGCTCCAGCTT
CTCATGAAGGTCCTCCACACGATGAAGAAGACGACGCGCGGCAGCAAGATTGGCGGCAAGTCCTCGCCGGAATCC-----
-GAAGTAGGTGGGGCGGGCGTGAAGAGCAT---------------CAAGGCCTCCCCGAGACGAGCGGC------GGCAG
GTCGTGGTGGCGGTGGCCAGAGGAAGGGCGTCGTGCGGGTGAAGGTGCTCCTGAGCAAGGAGGAGGCGGCGCGGCTGCTG
TCGCTGACCGTCGGGGGCCAGAAGACGGCGGCGCAGATCGTGGCCGAGATCAAGAGGATGGAGGCGCGCCGCGCCGCCGC
CAATGCCGCCGCGGCGGCCGGGTGGCGGCCCGCGCTGGCGAGCATCCCGGAGGAGTCGTCGTAGGT-------GCACCGT
GCACGTACGTGTGTTATCATGT---AGCGTCGTGTCCTT------GAGAAAGCGGGAAGAACAGCGAGAACGGAGGGAGA
TTTGGGCTGAGAGGCGAGCAGGCGACGCCGGAAGCTCCCCCTCCCATGCATCATCCGTATGCTGATGCTGATGTTGATGC
TGGTGTGTGTATATAGCAGCTTCCCTATTTTGAAGCTTCTCTTCTGCTCCC-CCATGCTGTTCATCCCGATCGCTTCTTG
TACTGCTCCCTCGATCACCATCCCAAAGAAATGGAATGAAATTTCGTTTTCTTCGTAGATCATTCGTGCTAATCCATGTG
TATTTC------TTTTGAGTTGGCTGTGCGTTTTCTTCTAGCAA-GATAATGACGAACATTATTTCAGAT----------
-----TAAGTATCTGGCCTTTCTTTCTCTGTCAGCACGCACTGACAGAACTGGCTACGTACTGGA----AA-CATTTTTC
TAAACGGATGATCGATGCAGATGGTGTCCTACACTACACATCACAC------CACATTTTGTTCACATCCACGAAGCATT
ACACAGCATA-----------------TTTTGCAGAAAACAATGGAGAGGAAGCTTGCGATCGA----------GGTTGC
TGCTCCGAAGGTGGATCATTTGTTGGTTACGATATGGCAAACTTAATAATGCAGCGGCCGGATGGGTTTTTGTCCTGGAA
CGCAACTCGTGCGACGGATTGGTTGG----GGAGCTTGATTGGCGGGCG-CCCCATGTGCAGTGGTTGCTGTTCTCTCTC
TCTCTCTCTCTCTCTCTCTGCTAGGCCTAGGCGGTACGTAGTGGGTTTGGATGACTGAATCGGTTGCATATATAAACCCC
AACAAATCCC----TTTTT---AGAAAAATATGAAATAAACAACCACTCCTTTCTTCTTCTTCTTCTTCTTCTTCCAAAT
TGGAATAAACAAGTGCAGGGCGCTCGCGTTAGTGTTGTGGTTGAGTTGTGGTGGACGGCGGTCGCCTCGCGAAAATGTTG
TTTATTGAGAGATATTTTTCCACGTTTTGTGTTTTTAGCTGGAAGATATTGA----GCAAAATGAATGTGCGTCGCACAT
TTCGGTGCAAGATCTTGTAGATTGGTTGGTTAAAGTATCTACGGCCAGACTTCGCAAATCCAGCTCTTTATACGCCTCGG
GCGCGTCCGCAGACAGCCCCCGCGATCCCTCATATGGGCTGCTACACATTCATATGTTTTAAATGCGGAGCCTCAAATCT
ATACATGTCAATCATACGATACAAATTGTCCGAATTCAATAGTTAAAAAAAAGCAAATAAAATCATAGTTCAACAATCCC
GACATGCCAAAATGAAATAAATATTTGATCATGATGAATGCCTCGCTTGCTAGCCGGATCACTCGTCGGACGCCCTCCAT
GCCACCTGCTTCGAGACCATCCTTGCTTGCTGCTCCGCCTGCATGCTCCACCTGCATCCTTGCCGCAT
>chr3B_57
CTGCCA--------------------------------------------------------TTCATGCGCAGTGGAGCT
TTAAGCTGGTTGTTGTGTTGAGAGCTTCAAGTTCTG-AAGTCTGAACTCGCAGCTGCAGACAATTCCGAAAGGCGCTGAA
GTCTGAACTGGGTTCTGAACTCTCAACTCTCCATCTGTGCTCTGAACTAGGCTTGGCAATTCCGGAAGATGCAAACTTAT
CACACCAAATCGGCTCGTTCCCCCGGCCCTCTTCGTCAGCGCCAGGTGCTG-----------------------------
----------------------CTAATCTGGAGCCCAAAATGCTGCACACATTCCGGTTACCACTCACGTGGTTAGGCAA
ATCAGCAACAGCACCCACCTCTGTCTGCATGCACCTGGAGCTTAGAGGCCAGGCTCA-GCAGAGTAGCTGTAATCTACTT
GTTCCGCGACCCAGCCAGCCTATTC-------CTCTCCAGGG--TCTG-----CTCCAATGGGCTAGTTGGAATCCCGCA
CATGATGCAATGGACGGCCTACTCCGGTCCAAGCTCAAGTACAAGATAATTATCCTGGTCACGATAAACTGTATTTTTAG
TCGCCTTTCCACCCCACGGTGTCTCCTTCCCCCCCGCTTTCCCGTAGAAACGTAGTCATCCACGAACCCTATGCGCATGT
CACCGCCCACAGAACTCCATGCGACACCCGCTTTGATGAAGTGCTATCAGCCTATCACACATGTTCCTCTCTTTTGTGAG
TAAATAACAAGTGATATGGTAGTACAAATGTTGGCCAAGTTG---TGTTACGGTACGCAGCATGTGCCGACT---TTTGC
TTTGATGTGATTAGTTTTGGTTTGTGCATGCAGTGGTATTAATCTGTGTCTACTTGCCGTGGACAAGTGCTAACTGTTGA
AGG-CCATTTTGACCCTTAAGCTGTAGCAGCAAATACTGTCCATTGGGCAGTGCAACCTACTCCTCGCGTACTATATTT-
---TAGTTAAGTTTCCTTCCGACCCTTGTCCTCGCGCGGCTGTGCCCGTTCGTTTGAGCATCTCCAACAGCCGCGCTAAA
CTAGCGCCGCGCCGCAAAATAGGCATTTTTAGCGCGCGCGTCAGGGCGCTCCAGCGGGCGCGCAAAAACGGCGCGCGCGC
TAAAACGGGTTGGGCGCGCGGGCAAAAACGCTTACCGCGCGGCGTATTTCGGGCGCCCACTACAGCGCGCGGCACACTCG
AGCGCTCGCGCCCGCTCTTCCTCTCGCGCTTCCACCCCCGACCGGCCGCGCCGCCGCCGCCGCCCGCGCACCCCCGGCGA
CCGTCTCAGGCTTCCCCGGCCTATCCCCGCGCGCCCGCGCTTCCGCCCATCCCCTCCTAGTACCGCCGACGCCCGCGCGC
CTCCGTCGTCCGAGGAACAGCGCCCGAGCGCTCGCCGCCGCGCCGCGCCCGCAAGGTGTTTGACAAAACGCCTACAAGGT
ATGTATTGCTCAAACTTCATGAATTTGGTGCATGTTTTGAATTGTAGTTTTTATAGTATAATATTGAACATTGTAGATGA
GTTCGTCGTATGATTCTTCCGAAGAAGAATTTGATATGGAAGAGTAGGAGGATCTTGCAATGATCGTAGCTATGCATATC
AATAAAAAACCGAAGCACGGTGTTTCGGTTATGGGTCGGGAGAAAATTTGGAGAGATAGGATTGATGCCCATAACAGATT
GATGAAGAACTATTTCGTGGAGAATCCCACGTACCCGGAGTCGTATTTTCGTCGCCGGTTTAGGATGAGCACCGAGTTGT
TCAGGCGCATTGCAGAGAAACTAGCGAGCCATGACCGGTTTTTCCAGCAAAGGAGGAATGCCGCCGGAGAGCTCGGGCAT
AGCACTTTTCTGAAGGTGACAGCCGCTTTGCGTATGTTGGCATACGGTATCCCGGCTGATCTAGTTGATGATCATTTGGC
TATGGGTGAGAGCCAAGCCATCATGTGTGTCAAGCGCTTTGCAGTGGGAATTGTGCAAGTGTTTGGCGAGGAGTATTTGA
GAGCTCCCACTGCTGAAGACGCCGCAAGGCTATTGGCGATGAACAAAGCGCGCGGCTTTCCTGGCATGCTTGGCTCAATA
GATTGCATGCATTGGAGTTGGAAGAATTGTCCAAAGGCATGGCATGGGCAATTCCACGGCCAAAAAAAGGGTTCCACTAT
AATCCTTGAAGCGGTGGCCGATCAGGAGACTTGGATTTGGCATGCATTCTTTGGAATGCCTGGATCTTTGAATGATATCA
ATGTTCTCAACCGGTCACCACTGATGAATAAAATTGCAAACGGTGAGTTGCCACCTGTGCAGTTTGTAGCAAATGGCCAT
ACGTACAACTATGGCTATTATCTAGCGGATGGCATCTATCCAAAGTGGCAAACCTTCGTGAAGTCGTTGAAAAAACCGGA
AGGTAAGAAAAATCTTGATTTCCACAATGCTCAGGCGGCGGCTAGAAAAGATGTGGAGAGAGCATTTGGGATTTTGCAAG
CCCAATTTGCTATTGTGAGAGAACGGCAAGATTTTGGGATCAACAAATGCTTTGGTACATCATGCACAACATGATCATCG
AGAATGAGCGTGACCAAGATTTAGACTACTCACAGTATGAGCTCTTGGGACATCCCGTGCGAGTGCGGCGGAGGGCTGAA
AGGGTAGCCCGTTTTGTTGCCTCCTATCATGCCATTCGGCGTCCCGCAACGCACAATAAACTTCAGAAAGATCTAATTAA
AGAGTGGTGGGCATGGCATGGACGGCAAAGAGCATGAACTTCATGAACTATTTGTTGTGTTGTAACAATTTATTTGAACT
ATTTGTTGTTGTACTGAACGATAAACTATTTGTTTGTGTTGTAATGATTTATTTTAAACTATTTGTTATTGATTTTTATT
TTGTTTGTTTGATCATTTTTGCTCATCTTCTTGCAAATGTATATATGGTTTGTGCGGCGCGCGCTGTATTTTTGCGCCCT
GCTGGAGCGGCGCGCGCTGCATTATAGCGCCGCTGCTGGAGCCAGCGCAGGCGGGCGCGCAAAACCAGCCGCAGCGCGCG
CTAACGGGTTTTTTACGTGCGGCGCTATAGCGCGACTGTTGGAGATCCTCTTATATAGACGCCATGGCTGTCACCACCAG
GCCGCCATCGGCACTGCTCATCTATTCTAG--------CCCTCTCTCCATCTCTCTCTTTCCCCAGCTCTGCTCACG---
---CAC---------AGCCACAAGTTCACAAGCCAGCACACGGCAAGCAGCACAGAGACGAGAGAAAATGGGCAACGCTC
TGCCGTGCTTGGTCGACCACGGCGTGAAGGCTCTGCCGGCGGCGGTGAGGCCCAGGCGGAGGATGTACTCGCTCAAGCTT
CTCATGAAGGTCCTCCACAGGATGAAGAGGACGCCGCGCGGCAACAAGATTGGCGGCAAGTCCTCGCCGGAATCC-----
-GAAGTAGGTGGGGCGGGTGTGAAGAGCAT---------------CAAGGCTTCCCCGAGACGAGCGGCAGCGGCGGCGG
GTCGTGGTGGCGGTGGCCAGAGGAAGGGCGTCGTGAGGGTGAAGGTGCTCCTCAGCAAGGAGGAGGCGGCGCGGCTGCTG
TCGCTGACCGTGGGAGGCCAGAAGACGGCGGCGCAGATCGTGGCCGAGATCAAGAGGATGGAGGCCCGCCGCGCCGCCGC
CAATGCCGCGGCGGCGGCCGGGTGGCGGCCCGCGCTGGCGAGTATCCCCGAGGAGTCGTCGTAGGT-------GCGCCGT
GCACGTACGTGTGTTATCATGTAGTAGCGTCGTGTCCGAGAGATGGAGAGAGCGAGAAGAACAGCGATAACGGAGGGAGA
TTTGGGCTGAGAGGCGAGCAGGCGACGCCGGAAGCTCCCCCTCCCATGCATCATCCGTATGCTGATGCTGATGCTGGTGT
GTGTGTGTGTGTATAGCAGCTTCCCTATTTTGAAGCTTCTCTTCTGCTCCC-CCCTGCTGTTCATCCCGATCGCTT---G
TACTCCTCCACCGATCACCAACCCAAAGAAATGGAATGAAATTTCGTTTTCTTCGTAAATCATTCGTGCTAATCCATGTG
TGTTTTCTGGAGTCG--------------GTTTCTTTCTTGCAA-GATAATGACGAACATTATTTCAGATAACCAGGTAG
CAAATTAACTATCTGGCCTTTCTTTCTCTGTCAGCACGCACTGACAGAATTGGCTACGTACTGGG----AACCATTTTTC
TAAATGGATGATCGACGCAGACGGTGTCCTGCTCCACGCATCACAACACATACACATTTTGTTCACATCTGCACCCCCGA
ACTCCCATCGCTCGCTCTACGTGATATTTTTCAGAAAAACAATGTAGAGGAAGCTGGCGATATCGATGGAGGTTGGTTGC
TGCTCCGAAGGTGGATCATTTGTTGGTTACGATATGGAAAACTTAATAATGCAGCGGCCGGATGGGTTTTTGTCCTGGAA
CGTAACTCGTGCGACGGATTGGTTGG----AGAGCTTGATTGGCGGGCGCCCCCATGTGCAGTGGTTGTCGTCCTCTCTC
TCTCTCTACTAGGCCTAGCTAG----CTAGGCGGTACGTAGTGGGTTTGGATGACTGAATCGGTTGCATA--TAAAACCC
AACAAATCAT----TTTTTTAGAGAGAAATATGAAATAAATAACCACTCCTTTCTTCTTCTT---CTTCTTCCTCCAAAT
TGCAATAAACAATGGCAGGGCGCTCGCGCTAGTGTTGTGGTTGAGTTGTGCTGGACGGCGGTCGCCCCGCGAAAATGTTG
TTTATTCAGAGATATTTT-CCAAGTTCTGTATTTTTAGCTGATTT---TTTTTTGTGCAAAACGAATGTGCATCGCACAT
TTCGGTGCAAGATCT-----------------------------------------------------------------
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>chr3D_69
--------------------------------------------------------------------CGCAGTGGAGCT
CTAAGCTGGTTGTTGGGTTGAGAGCTTCAAGTTCTGAAAGTCTGAACTCGCAGCTGCAGACTGCCGATGTCTCCAT----
----------------------------------------------CTGGGCTTGGCAATTCCGGAAGGCGCAAACTTAT
CACACCAAATCGGCTCGTTCCCCCGGTCCTCTTCGCCAGCGCCAGATGCTG-----------------------------
----------------------CTAATCTGGAGCCCGAAATGCTGCACACATTCCGGTTACCACTCACGTGGTTAGGCAA
ATCAGCAATAGCACCCACCTCTGTCTGCATGCACCTGGAGCTTAGAGGCCAGGCTCA-GAAGAGTAGCTGTGATCTACTT
GTTCCGCGACCCAGCCAGCCTAATC-------CTCTCCATGG--TCTCTGCTACTCCATTGGACTAGTAGGAATCCCGCA
CATGATGCAATGGACGGCCTACTCCGGTCCAAGCTCAAGTACAAGATAATGATCCTGGTCATGATAAACCGTATTTTTAG
TCGCCTTTCCACCCCACGGCGTCTCCTC-----------TCCCGTAGAAACGTAGTCATCCACGAACCCTATGCGCATGT
CACCGCCCACAAAACTCCATGCAACACCCACTTTGATGAAGTGCC--------ATCACACATGCTCCTCTCTTTTCTTTC
TGAATAACAAGTGATATAGTAGTACAAATGTTGGCCAAGTTGTAGTATTGCGGTACGCA----GCATGTGCCGACTTTGC
TTTGATGTGATTAGTTTTGGTCTGTGCAGTGGTAA-TAATAATCTGTGTCAACTTG-------CAAGTGCTAACTGTTGA
AGG-CCATTTTGACCCCTAAGCTCTTGTAGCAAATGCTGTCCATTGGGCAGTGCAACCTACTCCTCGCGTACTATATTC-
---TAGTTACGTTTCCTTCCAACCCTTGTCCTTGCGCGGCTGGCTGTGCCG-----------------------------
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--------------------------------------------------TTATATAGACGCCATGGCTGTCCCCACCAG
GCGGCCATTGGCACTGCTCATCTATTCTAGGTTTCTAGCCCTCTCTC--GCTCTCTCTTTCCCCAGCTCTGCTCACGGCA
AAGCAC---------AGCCACAAGTTCGCAAGCCAGCACACGGCAAGCAGCAGAGAGACGAGAGAAAATGGGCAACGCTC
TGCCGTGCTTGGTCGACCAGGGCGTGAAGGCTCTGCCGGCGGCGGCGAAGCCCAGGCGGAGGATGTACTCGCTCAAGCTT
CTCATGAGGGTCCTCCACAGGATGAAGAGGACGCCGCGCGGCAACAAGATTGGCGGCAAGTCCTCTCCGGAATCTGATTC
TGAAGTAGGTGGAGCTGGCGTGAAGAGTGTCAAGGCCAGCCACGGCAAGGCCTCCCCGAGACGAGCGGC------GGCGG
GTGGTGGTGGC---GGCCAGAGGAAGGGCGTCGTGAGGGTGAAGGTGCTCCTCAGCAAGGAGGAGGCGGCGCGGCTGCTG
TCGCTGACCGTGGGGGGCCAGAAGACGGCGGCGCAGATCGTGGCCGAGATCAAGAGGATGGAGGCCCGCCGCGCCGCCGC
CAATGCTGCCGCGGCGGCCGGGTGGCGGCCCGCGCTGGCGAGCATCCCCGAGGAGTTGTCGTAGGTGCACCGGGCACCGT
GCACGTACGTGTGTTATGTAGCTTCGCGTGTCCGA--GAGAGAGGGAGAGAGCGAGAAGGGA---------GGAGGGAGA
TTTGGGTTGAGAGGCGAGCAGGCGACACCGGCAGCTCCCCCTCCCATGCATCATCCGTACGCTGATGCTG----------
GTGTGTGTGTATATAGCAGCTTCCCTATTTTGAAGCTTCTCTTCTGCTCCCCCCATGCTGTTCATCCCGATCGCTT---G
TACTGCTCCCTCGATCACCATCCCAAAGAAATGGAATGAAATTTCGTTTTCTTCATAAATCATTCGTGCTAATCCATGTG
TCTTTTCTTCTTTTTTTAGTTAGTTGTGTGTTTTCTTCTAGCAAAGATAATAATGGACATTGTTTCAGATAACTAGCTAG
CAAATTAACTATCTGGC----CTTTCTCTGTCAGCACGCACTGACAGAATTGGCTACGTACGTACTGGAAACCATTTTTC
TAAATGGATGATCGACGCAGACGGTGTCCTGCTCTACGCATCACAACACATACACATTTTGTTCACATCTGCACTCCCGA
ACTCCCATCGCTCGCTCTACGTGATATTTTTTCAGAAAACAATGTAGAGGAAGCTGGCGATATCGATGGAGGTTG----C
TGCTCCGAAGGTGGATCATTTGTTGGTTGCGATATGGAAAACTTAATAATGCAGCGGCCGGATGGGTTTTTGTCCTGGAA
CGTAACTCGTGCGACGGATTGGTTGGGTGGGGAGCTTGATTGGCGGGCGCCCC-ATGTGCAGTGGTTGTTCT--------
----------TCTCTCTCTGCTAGGCCTAGGCGGTACGTGGTGGGTTTTGATGACTGAATCGGTTGCATA--GAAAACCC
AACAAATCCTCTCTTTTTT---TGAGAAAAATAAAACAATCAACCAATCCTTTCTTCTTCTT---CTC---CTTCCAAAT
TGCAATAAACAAGGGCAGGGCGCTCGCGCTAGTGTTGTGGTTGAGTTGTGCTGGACGGCGGTCGCCCCACGGAAATGTTG
TTTATTCAGCGATATTTTTCCACGTTTTGTGTTATTAGCTGGAAT---TTGA----GCAAAACGAATGTGCATCATACAT
TTCGGTGCAAGATCT-----------------------------------------------------------------
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>SNPs
SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------------
---------------------------------------------------------------S-SSSSS-SS-------
----------------------------------------------------S---------S-S-------------S-
--S---S-------------------------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-----S----------------------S-----------------------------
-------------------------S-------------S-S---S----S------S----------------------
---------------------S---SSSSSSS----------SS------------------------------------
-------------------------------S---------------S-------------------S---------S--
----------------------------SS---S----------------------------------------------
-------------------------------------S-----------SS--------------------S----S--S
---------------S--SS----------S-------------------------------------------------
-------------------------------------------S---------------------------------SS-
--SS-------------S------------------------------------------------S------------S
SSS-----------------S-------------------------SS--------------------------------
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-------------------------------------------S---------------------S--------------
------SSSSSSSSS--------------S----S--S--------------------------S---------------
--------------------------------------------------------------------------S-----
-------------------S--------S----S---------S------------------------------------
------------------------------------------------------------------------------S-
-----------------------------------S----------------S---------------------------
-----------S-----------------------------------------------------S--------------
------------------------------------------------S-------------------------------
-------------------------------------SS----------S----S------------S------------
-------------------------------------------------------------------------S--S--S
SS--------------------------------------------------------------------------SSS-
---------------------------------------------------------S----------------------
-S---S----------S----S-S----S---------------------------------------------------
--------S----------------------------------------S--------------S---------------
----S----------S-----S--------S-S----S-------S-----------------------SS-SSSS-SSS
--S-SSSSSS---------------------S------------S----------S-----SSS----------------
-------------------------------------S------------------------------------------
--S-----------------------------------------------------------------S---S-------
-------SSS------------------------------------------------------------SS----S---
---------S---------------S------------------------------------SSS---------------
--S----------S--------------S---------------------S---------------S-------------
------S-------------------------------------SSSS--------------S--------S--------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_225
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---------------------------------------------ACTGGGCATGGCAATTCTGA---------------
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>reverse_3895
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------------------------------------------------------GGAAGAACAGCGAGAACGGA------
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>forward_294
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----------------------------------GCCAGCGCCAAATGCTATAC--------------------------
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>reverse_4445
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--------------------------------------------GAGAGGAAGCTTGCGATCGA----------------
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