Multiple sequence alignment - TraesCS3A01G140600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G140600 chr3A 100.000 3852 0 0 1 3852 119692993 119696844 0.000000e+00 7114.0
1 TraesCS3A01G140600 chr3B 88.073 2725 205 62 1006 3667 161636728 161634061 0.000000e+00 3121.0
2 TraesCS3A01G140600 chr3B 93.193 617 33 5 1 609 161637644 161637029 0.000000e+00 898.0
3 TraesCS3A01G140600 chr3D 92.019 1942 120 21 1045 2969 110396997 110395074 0.000000e+00 2695.0
4 TraesCS3A01G140600 chr3D 92.822 613 25 5 1 609 110397883 110397286 0.000000e+00 870.0
5 TraesCS3A01G140600 chr3D 87.674 576 45 13 2967 3525 110395043 110394477 0.000000e+00 647.0
6 TraesCS3A01G140600 chr3D 83.448 145 16 3 3530 3667 110394405 110394262 1.120000e-25 128.0
7 TraesCS3A01G140600 chr6A 100.000 28 0 0 1148 1175 92544523 92544550 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G140600 chr3A 119692993 119696844 3851 False 7114.0 7114 100.00000 1 3852 1 chr3A.!!$F1 3851
1 TraesCS3A01G140600 chr3B 161634061 161637644 3583 True 2009.5 3121 90.63300 1 3667 2 chr3B.!!$R1 3666
2 TraesCS3A01G140600 chr3D 110394262 110397883 3621 True 1085.0 2695 88.99075 1 3667 4 chr3D.!!$R1 3666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.107116 ACAACAAAGTGCACCCCGTA 60.107 50.0 14.63 0.0 0.0 4.02 F
1032 1062 0.106918 TTGACCTGGCCTTTGTCGTT 60.107 50.0 3.32 0.0 0.0 3.85 F
1827 1922 0.109342 AGCTTGGGTTCAGGTGAGTG 59.891 55.0 0.00 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1510 1596 0.241213 CGACGAAGAGAGCAACAGGA 59.759 55.000 0.00 0.0 0.00 3.86 R
1860 1955 1.590238 GTGGACAGAGATTTCGCATCG 59.410 52.381 0.00 0.0 0.00 3.84 R
3755 3996 0.243636 TGCTCGATCACGCAAGAGAA 59.756 50.000 3.64 0.0 41.21 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.107116 ACAACAAAGTGCACCCCGTA 60.107 50.000 14.63 0.00 0.00 4.02
59 60 3.664551 TCTAGCCCTAACTGCAGTCTA 57.335 47.619 21.95 15.16 0.00 2.59
70 71 8.976353 CCCTAACTGCAGTCTATAGAATGATAT 58.024 37.037 29.29 15.70 42.16 1.63
108 109 8.548025 TCTAAAATGATGAACCTAACATCTCCA 58.452 33.333 0.00 0.00 42.89 3.86
117 118 4.911390 ACCTAACATCTCCAGTTTCCTTG 58.089 43.478 0.00 0.00 0.00 3.61
247 253 3.054655 TCATGTAGGGAAGCCTAACAACC 60.055 47.826 0.00 0.00 0.00 3.77
258 264 0.239347 CTAACAACCACTGCTGCTGC 59.761 55.000 8.89 8.89 40.20 5.25
351 360 9.104965 TCTGTACCATTATTTGCAGTTATGTAC 57.895 33.333 0.00 0.00 0.00 2.90
558 567 9.601217 AACTAGCTAGTCTGTAATTTATGTTGG 57.399 33.333 26.21 0.00 34.99 3.77
569 578 6.768861 TGTAATTTATGTTGGGTCGGAATAGG 59.231 38.462 0.00 0.00 0.00 2.57
570 579 3.849563 TTATGTTGGGTCGGAATAGGG 57.150 47.619 0.00 0.00 0.00 3.53
571 580 0.182775 ATGTTGGGTCGGAATAGGGC 59.817 55.000 0.00 0.00 0.00 5.19
583 592 3.871594 CGGAATAGGGCGGATAATTCATC 59.128 47.826 0.00 0.00 31.38 2.92
586 595 5.946377 GGAATAGGGCGGATAATTCATCTTT 59.054 40.000 0.00 0.00 33.78 2.52
599 608 4.305539 TTCATCTTTCCCATTGCTCTGA 57.694 40.909 0.00 0.00 0.00 3.27
603 612 4.038271 TCTTTCCCATTGCTCTGATTGT 57.962 40.909 0.00 0.00 0.00 2.71
609 618 5.569355 TCCCATTGCTCTGATTGTTCTAAA 58.431 37.500 0.00 0.00 0.00 1.85
610 619 5.649395 TCCCATTGCTCTGATTGTTCTAAAG 59.351 40.000 0.00 0.00 0.00 1.85
611 620 5.649395 CCCATTGCTCTGATTGTTCTAAAGA 59.351 40.000 0.00 0.00 0.00 2.52
612 621 6.320672 CCCATTGCTCTGATTGTTCTAAAGAT 59.679 38.462 0.00 0.00 0.00 2.40
613 622 7.416022 CCATTGCTCTGATTGTTCTAAAGATC 58.584 38.462 0.00 0.00 0.00 2.75
614 623 7.282675 CCATTGCTCTGATTGTTCTAAAGATCT 59.717 37.037 0.00 0.00 0.00 2.75
615 624 7.840342 TTGCTCTGATTGTTCTAAAGATCTC 57.160 36.000 0.00 0.00 0.00 2.75
616 625 7.180322 TGCTCTGATTGTTCTAAAGATCTCT 57.820 36.000 0.00 0.00 0.00 3.10
617 626 8.298729 TGCTCTGATTGTTCTAAAGATCTCTA 57.701 34.615 0.00 0.00 0.00 2.43
618 627 8.194104 TGCTCTGATTGTTCTAAAGATCTCTAC 58.806 37.037 0.00 0.00 0.00 2.59
619 628 8.194104 GCTCTGATTGTTCTAAAGATCTCTACA 58.806 37.037 0.00 0.00 0.00 2.74
620 629 9.515020 CTCTGATTGTTCTAAAGATCTCTACAC 57.485 37.037 0.00 0.00 0.00 2.90
621 630 8.184848 TCTGATTGTTCTAAAGATCTCTACACG 58.815 37.037 0.00 0.00 0.00 4.49
622 631 6.752351 TGATTGTTCTAAAGATCTCTACACGC 59.248 38.462 0.00 0.00 0.00 5.34
624 633 5.881447 TGTTCTAAAGATCTCTACACGCTC 58.119 41.667 0.00 0.00 0.00 5.03
625 634 4.797693 TCTAAAGATCTCTACACGCTCG 57.202 45.455 0.00 0.00 0.00 5.03
629 638 3.138205 AGATCTCTACACGCTCGTTTG 57.862 47.619 0.00 0.00 0.00 2.93
630 639 2.747989 AGATCTCTACACGCTCGTTTGA 59.252 45.455 0.00 0.00 0.00 2.69
631 640 2.613730 TCTCTACACGCTCGTTTGAG 57.386 50.000 0.00 1.59 45.49 3.02
646 655 6.606234 TCGTTTGAGCTGTAACATTAAACA 57.394 33.333 0.00 0.00 0.00 2.83
648 657 7.644490 TCGTTTGAGCTGTAACATTAAACATT 58.356 30.769 0.00 0.00 0.00 2.71
676 690 3.825014 CCTCAATAATGGAGGCAATCTGG 59.175 47.826 0.00 0.00 44.95 3.86
677 691 4.446745 CCTCAATAATGGAGGCAATCTGGA 60.447 45.833 0.00 0.00 44.95 3.86
678 692 4.722220 TCAATAATGGAGGCAATCTGGAG 58.278 43.478 0.00 0.00 0.00 3.86
679 693 3.803186 ATAATGGAGGCAATCTGGAGG 57.197 47.619 0.00 0.00 0.00 4.30
680 694 1.302907 AATGGAGGCAATCTGGAGGT 58.697 50.000 0.00 0.00 0.00 3.85
681 695 1.302907 ATGGAGGCAATCTGGAGGTT 58.697 50.000 0.00 0.00 0.00 3.50
682 696 0.620556 TGGAGGCAATCTGGAGGTTC 59.379 55.000 0.00 0.00 0.00 3.62
683 697 0.620556 GGAGGCAATCTGGAGGTTCA 59.379 55.000 0.00 0.00 0.00 3.18
684 698 1.680249 GGAGGCAATCTGGAGGTTCAC 60.680 57.143 0.00 0.00 0.00 3.18
685 699 1.280421 GAGGCAATCTGGAGGTTCACT 59.720 52.381 0.00 0.00 0.00 3.41
686 700 1.707427 AGGCAATCTGGAGGTTCACTT 59.293 47.619 0.00 0.00 0.00 3.16
694 708 1.771854 TGGAGGTTCACTTGGCAGTAA 59.228 47.619 0.00 0.00 0.00 2.24
724 738 8.304607 GTACTCGTAATTAGTACAGTCGTTTC 57.695 38.462 10.75 0.00 45.64 2.78
725 739 6.902341 ACTCGTAATTAGTACAGTCGTTTCA 58.098 36.000 0.00 0.00 32.45 2.69
729 743 7.535258 TCGTAATTAGTACAGTCGTTTCACTTC 59.465 37.037 0.00 0.00 32.45 3.01
732 746 4.913335 AGTACAGTCGTTTCACTTCTCA 57.087 40.909 0.00 0.00 0.00 3.27
734 748 3.802948 ACAGTCGTTTCACTTCTCAGT 57.197 42.857 0.00 0.00 0.00 3.41
735 749 4.124851 ACAGTCGTTTCACTTCTCAGTT 57.875 40.909 0.00 0.00 0.00 3.16
736 750 4.113354 ACAGTCGTTTCACTTCTCAGTTC 58.887 43.478 0.00 0.00 0.00 3.01
737 751 4.142138 ACAGTCGTTTCACTTCTCAGTTCT 60.142 41.667 0.00 0.00 0.00 3.01
741 755 6.039493 AGTCGTTTCACTTCTCAGTTCTCTAA 59.961 38.462 0.00 0.00 0.00 2.10
744 758 6.697892 CGTTTCACTTCTCAGTTCTCTAAACT 59.302 38.462 0.00 0.00 0.00 2.66
748 762 7.203910 TCACTTCTCAGTTCTCTAAACTTCAC 58.796 38.462 0.00 0.00 0.00 3.18
752 766 7.531857 TCTCAGTTCTCTAAACTTCACTGAT 57.468 36.000 0.52 0.00 39.81 2.90
753 767 7.374272 TCTCAGTTCTCTAAACTTCACTGATG 58.626 38.462 0.52 0.00 39.81 3.07
754 768 5.928839 TCAGTTCTCTAAACTTCACTGATGC 59.071 40.000 0.00 0.00 36.57 3.91
755 769 5.931146 CAGTTCTCTAAACTTCACTGATGCT 59.069 40.000 0.00 0.00 34.74 3.79
756 770 7.039714 TCAGTTCTCTAAACTTCACTGATGCTA 60.040 37.037 0.00 0.00 36.57 3.49
757 771 7.275341 CAGTTCTCTAAACTTCACTGATGCTAG 59.725 40.741 0.00 0.00 34.74 3.42
758 772 6.842437 TCTCTAAACTTCACTGATGCTAGT 57.158 37.500 0.00 0.00 0.00 2.57
760 774 5.724328 TCTAAACTTCACTGATGCTAGTGG 58.276 41.667 13.67 4.61 46.26 4.00
761 775 4.357918 AAACTTCACTGATGCTAGTGGT 57.642 40.909 13.67 5.09 46.26 4.16
777 792 6.436218 TGCTAGTGGTCAAGTGATCTAGTAAA 59.564 38.462 13.97 4.70 31.76 2.01
786 801 9.871238 GTCAAGTGATCTAGTAAATGGTTCTTA 57.129 33.333 0.00 0.00 0.00 2.10
787 802 9.871238 TCAAGTGATCTAGTAAATGGTTCTTAC 57.129 33.333 0.00 0.00 0.00 2.34
788 803 9.877178 CAAGTGATCTAGTAAATGGTTCTTACT 57.123 33.333 0.00 1.31 41.40 2.24
796 811 9.827411 CTAGTAAATGGTTCTTACTTTTCTTGC 57.173 33.333 0.95 0.00 39.66 4.01
797 812 8.465273 AGTAAATGGTTCTTACTTTTCTTGCT 57.535 30.769 0.00 0.00 36.42 3.91
798 813 8.352942 AGTAAATGGTTCTTACTTTTCTTGCTG 58.647 33.333 0.00 0.00 36.42 4.41
799 814 5.712152 ATGGTTCTTACTTTTCTTGCTGG 57.288 39.130 0.00 0.00 0.00 4.85
800 815 4.532834 TGGTTCTTACTTTTCTTGCTGGT 58.467 39.130 0.00 0.00 0.00 4.00
801 816 4.338118 TGGTTCTTACTTTTCTTGCTGGTG 59.662 41.667 0.00 0.00 0.00 4.17
802 817 4.261614 GGTTCTTACTTTTCTTGCTGGTGG 60.262 45.833 0.00 0.00 0.00 4.61
803 818 4.164843 TCTTACTTTTCTTGCTGGTGGT 57.835 40.909 0.00 0.00 0.00 4.16
804 819 4.532834 TCTTACTTTTCTTGCTGGTGGTT 58.467 39.130 0.00 0.00 0.00 3.67
805 820 4.578928 TCTTACTTTTCTTGCTGGTGGTTC 59.421 41.667 0.00 0.00 0.00 3.62
806 821 3.018423 ACTTTTCTTGCTGGTGGTTCT 57.982 42.857 0.00 0.00 0.00 3.01
807 822 3.365472 ACTTTTCTTGCTGGTGGTTCTT 58.635 40.909 0.00 0.00 0.00 2.52
808 823 3.769300 ACTTTTCTTGCTGGTGGTTCTTT 59.231 39.130 0.00 0.00 0.00 2.52
809 824 3.799281 TTTCTTGCTGGTGGTTCTTTG 57.201 42.857 0.00 0.00 0.00 2.77
810 825 1.032014 TCTTGCTGGTGGTTCTTTGC 58.968 50.000 0.00 0.00 0.00 3.68
811 826 0.746063 CTTGCTGGTGGTTCTTTGCA 59.254 50.000 0.00 0.00 0.00 4.08
812 827 1.342174 CTTGCTGGTGGTTCTTTGCAT 59.658 47.619 0.00 0.00 0.00 3.96
813 828 0.961019 TGCTGGTGGTTCTTTGCATC 59.039 50.000 0.00 0.00 0.00 3.91
814 829 1.251251 GCTGGTGGTTCTTTGCATCT 58.749 50.000 0.00 0.00 0.00 2.90
815 830 1.200948 GCTGGTGGTTCTTTGCATCTC 59.799 52.381 0.00 0.00 0.00 2.75
816 831 2.787994 CTGGTGGTTCTTTGCATCTCT 58.212 47.619 0.00 0.00 0.00 3.10
817 832 3.869912 GCTGGTGGTTCTTTGCATCTCTA 60.870 47.826 0.00 0.00 0.00 2.43
818 833 4.521146 CTGGTGGTTCTTTGCATCTCTAT 58.479 43.478 0.00 0.00 0.00 1.98
828 843 7.122138 TCTTTGCATCTCTATCTCTCAACAT 57.878 36.000 0.00 0.00 0.00 2.71
831 846 8.654230 TTTGCATCTCTATCTCTCAACATTAC 57.346 34.615 0.00 0.00 0.00 1.89
836 851 5.892119 TCTCTATCTCTCAACATTACCCGTT 59.108 40.000 0.00 0.00 0.00 4.44
837 852 6.039493 TCTCTATCTCTCAACATTACCCGTTC 59.961 42.308 0.00 0.00 0.00 3.95
859 874 3.037549 AGGACCTGATCTCATGGTTCTC 58.962 50.000 0.00 0.00 34.81 2.87
861 876 3.390639 GGACCTGATCTCATGGTTCTCAT 59.609 47.826 0.00 0.00 36.31 2.90
864 879 5.191426 ACCTGATCTCATGGTTCTCATTTG 58.809 41.667 0.00 0.00 32.92 2.32
867 882 4.945543 TGATCTCATGGTTCTCATTTGGTG 59.054 41.667 0.00 0.00 32.92 4.17
868 883 4.639078 TCTCATGGTTCTCATTTGGTGA 57.361 40.909 0.00 0.00 32.92 4.02
869 884 5.183530 TCTCATGGTTCTCATTTGGTGAT 57.816 39.130 0.00 0.00 35.97 3.06
870 885 5.573219 TCTCATGGTTCTCATTTGGTGATT 58.427 37.500 0.00 0.00 35.97 2.57
871 886 5.416639 TCTCATGGTTCTCATTTGGTGATTG 59.583 40.000 0.00 0.00 35.97 2.67
872 887 5.078949 TCATGGTTCTCATTTGGTGATTGT 58.921 37.500 0.00 0.00 35.97 2.71
873 888 4.852134 TGGTTCTCATTTGGTGATTGTG 57.148 40.909 0.00 0.00 35.97 3.33
875 890 3.578688 GTTCTCATTTGGTGATTGTGCC 58.421 45.455 0.00 0.00 35.97 5.01
876 891 2.170166 TCTCATTTGGTGATTGTGCCC 58.830 47.619 0.00 0.00 35.97 5.36
877 892 1.894466 CTCATTTGGTGATTGTGCCCA 59.106 47.619 0.00 0.00 35.97 5.36
878 893 1.617850 TCATTTGGTGATTGTGCCCAC 59.382 47.619 0.00 0.00 0.00 4.61
879 894 1.343789 CATTTGGTGATTGTGCCCACA 59.656 47.619 0.00 0.00 39.98 4.17
880 895 6.868736 CTCATTTGGTGATTGTGCCCACAC 62.869 50.000 0.00 0.00 40.82 3.82
881 896 1.112315 TTGGTGATTGTGCCCACACC 61.112 55.000 0.00 0.00 46.86 4.16
882 897 2.625823 GGTGATTGTGCCCACACCG 61.626 63.158 0.00 0.00 46.86 4.94
883 898 1.896660 GTGATTGTGCCCACACCGT 60.897 57.895 0.00 0.00 46.86 4.83
884 899 0.604243 GTGATTGTGCCCACACCGTA 60.604 55.000 0.00 0.00 46.86 4.02
885 900 0.108774 TGATTGTGCCCACACCGTAA 59.891 50.000 0.00 0.00 46.86 3.18
886 901 1.240256 GATTGTGCCCACACCGTAAA 58.760 50.000 0.00 0.00 46.86 2.01
887 902 1.609555 GATTGTGCCCACACCGTAAAA 59.390 47.619 0.00 0.00 46.86 1.52
888 903 0.739561 TTGTGCCCACACCGTAAAAC 59.260 50.000 0.00 0.00 46.86 2.43
899 914 5.285651 CACACCGTAAAACATTCCAATTGT 58.714 37.500 4.43 0.00 0.00 2.71
903 918 7.334671 ACACCGTAAAACATTCCAATTGTTTTT 59.665 29.630 16.74 7.13 41.25 1.94
922 937 8.439993 TGTTTTTACTTTTATTTTTGAGGGGC 57.560 30.769 0.00 0.00 0.00 5.80
923 938 8.268605 TGTTTTTACTTTTATTTTTGAGGGGCT 58.731 29.630 0.00 0.00 0.00 5.19
924 939 9.116067 GTTTTTACTTTTATTTTTGAGGGGCTT 57.884 29.630 0.00 0.00 0.00 4.35
925 940 8.896320 TTTTACTTTTATTTTTGAGGGGCTTC 57.104 30.769 0.00 0.00 0.00 3.86
926 941 5.483685 ACTTTTATTTTTGAGGGGCTTCC 57.516 39.130 0.00 0.00 0.00 3.46
927 942 4.904853 ACTTTTATTTTTGAGGGGCTTCCA 59.095 37.500 0.00 0.00 38.24 3.53
928 943 5.547666 ACTTTTATTTTTGAGGGGCTTCCAT 59.452 36.000 0.00 0.00 38.24 3.41
929 944 6.044287 ACTTTTATTTTTGAGGGGCTTCCATT 59.956 34.615 0.00 0.00 38.24 3.16
930 945 6.446909 TTTATTTTTGAGGGGCTTCCATTT 57.553 33.333 0.00 0.00 38.24 2.32
931 946 4.999469 ATTTTTGAGGGGCTTCCATTTT 57.001 36.364 0.00 0.00 38.24 1.82
932 947 4.787135 TTTTTGAGGGGCTTCCATTTTT 57.213 36.364 0.00 0.00 38.24 1.94
957 972 6.554334 TTCTACTTTGTGTGGTGAATAAGC 57.446 37.500 0.00 0.00 0.00 3.09
973 988 1.619654 AAGCTGTGCTATGCAAACCA 58.380 45.000 0.00 0.00 41.47 3.67
974 989 1.619654 AGCTGTGCTATGCAAACCAA 58.380 45.000 0.00 0.00 41.47 3.67
985 1002 8.341903 GTGCTATGCAAACCAATTTTTAGTTTT 58.658 29.630 0.00 0.00 41.47 2.43
987 1004 9.381027 GCTATGCAAACCAATTTTTAGTTTTTC 57.619 29.630 0.00 0.00 31.54 2.29
999 1016 8.800370 ATTTTTAGTTTTTCTCCCTGCAAAAA 57.200 26.923 0.00 0.00 0.00 1.94
1029 1059 0.961753 CCTTTGACCTGGCCTTTGTC 59.038 55.000 3.32 8.61 0.00 3.18
1032 1062 0.106918 TTGACCTGGCCTTTGTCGTT 60.107 50.000 3.32 0.00 0.00 3.85
1038 1068 0.953471 TGGCCTTTGTCGTTCATCCG 60.953 55.000 3.32 0.00 0.00 4.18
1057 1126 2.351835 CCGTCTCATTATCCTAGCCGTG 60.352 54.545 0.00 0.00 0.00 4.94
1068 1137 2.240162 CTAGCCGTGAACCTCCCACC 62.240 65.000 0.00 0.00 0.00 4.61
1075 1152 3.182996 AACCTCCCACCCCACACC 61.183 66.667 0.00 0.00 0.00 4.16
1076 1153 3.749947 AACCTCCCACCCCACACCT 62.750 63.158 0.00 0.00 0.00 4.00
1088 1165 0.397941 CCACACCTCTCCAAAGCTCA 59.602 55.000 0.00 0.00 0.00 4.26
1099 1176 1.335324 CCAAAGCTCAAAACTGCTCCG 60.335 52.381 0.00 0.00 38.75 4.63
1120 1197 2.710902 GGCCAAATGGTCCCGCTTC 61.711 63.158 0.00 0.00 37.57 3.86
1499 1585 1.153449 CCCTCGCGGTAAATGCTCA 60.153 57.895 6.13 0.00 0.00 4.26
1500 1586 0.532862 CCCTCGCGGTAAATGCTCAT 60.533 55.000 6.13 0.00 0.00 2.90
1501 1587 0.861837 CCTCGCGGTAAATGCTCATC 59.138 55.000 6.13 0.00 0.00 2.92
1503 1589 0.176910 TCGCGGTAAATGCTCATCCA 59.823 50.000 6.13 0.00 0.00 3.41
1504 1590 0.304705 CGCGGTAAATGCTCATCCAC 59.695 55.000 0.00 0.00 0.00 4.02
1506 1592 2.016604 GCGGTAAATGCTCATCCACCA 61.017 52.381 11.17 0.00 0.00 4.17
1508 1594 2.549754 CGGTAAATGCTCATCCACCATC 59.450 50.000 11.17 0.00 0.00 3.51
1509 1595 2.887152 GGTAAATGCTCATCCACCATCC 59.113 50.000 7.54 0.00 0.00 3.51
1510 1596 3.435601 GGTAAATGCTCATCCACCATCCT 60.436 47.826 7.54 0.00 0.00 3.24
1511 1597 2.653234 AATGCTCATCCACCATCCTC 57.347 50.000 0.00 0.00 0.00 3.71
1512 1598 0.769873 ATGCTCATCCACCATCCTCC 59.230 55.000 0.00 0.00 0.00 4.30
1538 1624 1.923204 CTCTCTTCGTCGAGGCATTTG 59.077 52.381 0.00 0.00 0.00 2.32
1551 1637 1.474077 GGCATTTGATCGAGCAGGTTT 59.526 47.619 2.57 0.00 0.00 3.27
1554 1640 0.881118 TTTGATCGAGCAGGTTTGGC 59.119 50.000 2.57 0.00 0.00 4.52
1659 1745 4.312231 CACAACCTGGCGCACGTG 62.312 66.667 12.28 12.28 0.00 4.49
1683 1769 1.031571 TCAATGCCATCGACCTTGCC 61.032 55.000 0.00 0.00 0.00 4.52
1738 1833 1.083706 ACCCTGGGAGATGGCTTCT 59.916 57.895 22.23 2.05 37.41 2.85
1739 1834 0.551131 ACCCTGGGAGATGGCTTCTT 60.551 55.000 22.23 0.00 33.74 2.52
1740 1835 0.627986 CCCTGGGAGATGGCTTCTTT 59.372 55.000 7.01 0.00 33.74 2.52
1741 1836 1.684248 CCCTGGGAGATGGCTTCTTTG 60.684 57.143 7.01 0.00 33.74 2.77
1742 1837 1.101331 CTGGGAGATGGCTTCTTTGC 58.899 55.000 4.23 0.00 33.74 3.68
1761 1856 2.804931 GATTTTGCGCGTGTGGCC 60.805 61.111 8.43 0.00 38.94 5.36
1827 1922 0.109342 AGCTTGGGTTCAGGTGAGTG 59.891 55.000 0.00 0.00 0.00 3.51
1850 1945 0.387622 CAAAGAATGCGGCAGTGTGG 60.388 55.000 8.01 0.00 0.00 4.17
1853 1948 1.028330 AGAATGCGGCAGTGTGGATG 61.028 55.000 8.01 0.00 0.00 3.51
1860 1955 1.131126 CGGCAGTGTGGATGTTGAATC 59.869 52.381 0.00 0.00 0.00 2.52
1883 1978 1.338105 TGCGAAATCTCTGTCCACTGG 60.338 52.381 0.00 0.00 0.00 4.00
1885 1980 2.872038 GCGAAATCTCTGTCCACTGGTT 60.872 50.000 0.00 0.00 0.00 3.67
1901 2004 1.340502 TGGTTGTTCTGCCTGTTGTCA 60.341 47.619 0.00 0.00 0.00 3.58
1912 2015 3.563808 TGCCTGTTGTCAACTTGTCATAC 59.436 43.478 16.45 0.00 0.00 2.39
1913 2016 3.563808 GCCTGTTGTCAACTTGTCATACA 59.436 43.478 16.45 0.00 0.00 2.29
1915 2018 5.278463 GCCTGTTGTCAACTTGTCATACATT 60.278 40.000 16.45 0.00 0.00 2.71
1916 2019 6.144854 CCTGTTGTCAACTTGTCATACATTG 58.855 40.000 16.45 0.00 0.00 2.82
1917 2020 6.070897 TGTTGTCAACTTGTCATACATTGG 57.929 37.500 16.45 0.00 0.00 3.16
1918 2021 4.764679 TGTCAACTTGTCATACATTGGC 57.235 40.909 0.00 0.00 0.00 4.52
1920 2023 2.746904 TCAACTTGTCATACATTGGCGG 59.253 45.455 0.00 0.00 30.28 6.13
1922 2025 2.083774 ACTTGTCATACATTGGCGGTG 58.916 47.619 0.00 0.00 30.28 4.94
1923 2026 2.290008 ACTTGTCATACATTGGCGGTGA 60.290 45.455 0.00 0.00 30.28 4.02
1924 2027 2.708216 TGTCATACATTGGCGGTGAT 57.292 45.000 0.00 0.00 30.28 3.06
1925 2028 3.828875 TGTCATACATTGGCGGTGATA 57.171 42.857 0.00 0.00 30.28 2.15
1927 2030 3.133901 TGTCATACATTGGCGGTGATAGT 59.866 43.478 0.00 0.00 30.28 2.12
1928 2031 4.127171 GTCATACATTGGCGGTGATAGTT 58.873 43.478 0.00 0.00 0.00 2.24
1929 2032 4.574828 GTCATACATTGGCGGTGATAGTTT 59.425 41.667 0.00 0.00 0.00 2.66
1930 2033 4.814234 TCATACATTGGCGGTGATAGTTTC 59.186 41.667 0.00 0.00 0.00 2.78
1931 2034 2.365582 ACATTGGCGGTGATAGTTTCC 58.634 47.619 0.00 0.00 0.00 3.13
1932 2035 2.026262 ACATTGGCGGTGATAGTTTCCT 60.026 45.455 0.00 0.00 0.00 3.36
1933 2036 2.871096 TTGGCGGTGATAGTTTCCTT 57.129 45.000 0.00 0.00 0.00 3.36
1939 2042 4.272748 GGCGGTGATAGTTTCCTTTATGAC 59.727 45.833 0.00 0.00 0.00 3.06
1961 2064 7.450074 TGACCTATGTCAGATTGTTGTAAGTT 58.550 34.615 0.00 0.00 46.40 2.66
2061 2165 0.322816 ATGTTTCTGCACGGATGGCT 60.323 50.000 0.00 0.00 0.00 4.75
2103 2208 3.132925 GCCAGATCATCTTCTTCTCTGC 58.867 50.000 0.00 0.00 33.58 4.26
2104 2209 3.382855 CCAGATCATCTTCTTCTCTGCG 58.617 50.000 0.00 0.00 33.58 5.18
2106 2211 4.262121 CCAGATCATCTTCTTCTCTGCGAT 60.262 45.833 0.00 0.00 33.58 4.58
2112 2217 5.823045 TCATCTTCTTCTCTGCGATACTGTA 59.177 40.000 0.00 0.00 0.00 2.74
2139 2244 5.991328 ATACATTGTTTATGACCTGCTCG 57.009 39.130 0.00 0.00 37.69 5.03
2140 2245 3.009723 ACATTGTTTATGACCTGCTCGG 58.990 45.455 0.00 0.00 37.69 4.63
2189 2294 8.918202 TTTTTAGATGACAGTAGTTGGTGAAT 57.082 30.769 0.00 0.00 0.00 2.57
2195 2300 9.520515 AGATGACAGTAGTTGGTGAATAATTTT 57.479 29.630 0.00 0.00 0.00 1.82
2301 2408 3.763897 AGAAGTTAATTGGCTTTGCGGAT 59.236 39.130 0.00 0.00 0.00 4.18
2313 2420 2.462456 TTGCGGATCATAGATCTGCC 57.538 50.000 28.33 16.19 46.85 4.85
2432 2539 2.420372 GTGCTGCTTTTAGAGGTTAGGC 59.580 50.000 0.00 0.00 0.00 3.93
2510 2618 6.861065 TTGTTTCTCTGTAACATTCCAGAC 57.139 37.500 0.00 0.00 35.60 3.51
2511 2619 6.174720 TGTTTCTCTGTAACATTCCAGACT 57.825 37.500 0.00 0.00 34.20 3.24
2552 2660 6.498538 TGTTGTAATGAGGGGTCCATTTAAT 58.501 36.000 0.00 0.00 35.94 1.40
2555 2663 8.410912 GTTGTAATGAGGGGTCCATTTAATTAC 58.589 37.037 0.00 0.00 35.94 1.89
2558 2666 5.538082 TGAGGGGTCCATTTAATTACCAA 57.462 39.130 8.08 0.00 33.46 3.67
2605 2713 6.222038 TCGAGAATGGTAAGCTTTGACTAT 57.778 37.500 3.20 0.00 0.00 2.12
2614 2722 6.210784 TGGTAAGCTTTGACTATACTGTGACT 59.789 38.462 3.20 0.00 0.00 3.41
2615 2723 7.395206 TGGTAAGCTTTGACTATACTGTGACTA 59.605 37.037 3.20 0.00 0.00 2.59
2679 2787 6.494893 TTGTTGATGCTGTTATTCAGGTAC 57.505 37.500 0.00 0.00 43.78 3.34
2731 2839 1.650528 CCTTTCAGAGGTGAGGGACT 58.349 55.000 0.00 0.00 41.11 3.85
2734 2842 3.386402 CCTTTCAGAGGTGAGGGACTATC 59.614 52.174 0.00 0.00 39.10 2.08
2747 2855 7.016268 GGTGAGGGACTATCTATTGTTTATCCA 59.984 40.741 0.00 0.00 41.55 3.41
2775 2883 6.801862 GTGTTTTGATGTATCTAACTTGTGGC 59.198 38.462 9.88 0.00 0.00 5.01
2776 2884 5.794687 TTTGATGTATCTAACTTGTGGCG 57.205 39.130 0.00 0.00 0.00 5.69
2826 2934 3.126514 GCATGTGTTGTTGAGATGGAGAG 59.873 47.826 0.00 0.00 0.00 3.20
2852 2960 6.541641 AGAGAATGCTAGTTTGAATGGCTAAG 59.458 38.462 0.00 0.00 0.00 2.18
2859 2968 4.973168 AGTTTGAATGGCTAAGTCTCACA 58.027 39.130 0.00 0.00 0.00 3.58
2870 2979 5.340803 GCTAAGTCTCACATGACGAATACA 58.659 41.667 0.00 0.00 41.47 2.29
2885 2994 5.892568 ACGAATACATGAGAGACTTGGTAC 58.107 41.667 0.00 0.00 0.00 3.34
2890 2999 3.126514 ACATGAGAGACTTGGTACGTACG 59.873 47.826 18.98 15.01 0.00 3.67
2917 3026 6.569418 CGCAGATATTCTAGCACACTGATACT 60.569 42.308 0.00 0.00 0.00 2.12
2954 3063 0.397675 TGATGCCAACCACCACCAAA 60.398 50.000 0.00 0.00 0.00 3.28
2961 3070 1.206849 CAACCACCACCAAACTGCTTT 59.793 47.619 0.00 0.00 0.00 3.51
2969 3078 2.629617 CACCAAACTGCTTTCATCCCTT 59.370 45.455 0.00 0.00 0.00 3.95
3031 3174 9.578439 CATACATGATCACATCTATTATGTCGT 57.422 33.333 0.00 0.00 35.75 4.34
3091 3247 4.313282 TGCTAGTATGCATCAGCTGATTC 58.687 43.478 26.70 22.18 42.74 2.52
3108 3264 6.225703 CTGATTCAGCTATATGTGCACTTC 57.774 41.667 19.41 0.00 0.00 3.01
3125 3281 5.122239 TGCACTTCGAATGATTGTAGGAAAG 59.878 40.000 0.00 0.00 0.00 2.62
3130 3286 8.846211 ACTTCGAATGATTGTAGGAAAGAAAAA 58.154 29.630 0.00 0.00 0.00 1.94
3131 3287 9.118236 CTTCGAATGATTGTAGGAAAGAAAAAC 57.882 33.333 0.00 0.00 0.00 2.43
3132 3288 8.160521 TCGAATGATTGTAGGAAAGAAAAACA 57.839 30.769 0.00 0.00 0.00 2.83
3133 3289 8.073768 TCGAATGATTGTAGGAAAGAAAAACAC 58.926 33.333 0.00 0.00 0.00 3.32
3135 3291 6.067263 TGATTGTAGGAAAGAAAAACACCG 57.933 37.500 0.00 0.00 0.00 4.94
3175 3332 4.416738 GGGTCCTGCCTGCCAGTC 62.417 72.222 0.00 0.00 40.06 3.51
3239 3396 2.224257 GCCTCAAAGTTTTTGATGGGCA 60.224 45.455 20.78 0.00 38.72 5.36
3241 3398 4.060205 CCTCAAAGTTTTTGATGGGCAAG 58.940 43.478 4.85 0.00 37.87 4.01
3242 3400 3.465871 TCAAAGTTTTTGATGGGCAAGC 58.534 40.909 0.36 0.00 37.87 4.01
3277 3435 1.977009 GCAAGTTGGGCAGGGGTAC 60.977 63.158 4.75 0.00 0.00 3.34
3315 3480 8.780249 TCCTAGTTATTTTGCTTCACAACTAAC 58.220 33.333 0.00 0.00 38.23 2.34
3318 3483 6.910433 AGTTATTTTGCTTCACAACTAACACG 59.090 34.615 10.34 0.00 38.21 4.49
3323 3488 3.244078 TGCTTCACAACTAACACGAGGAT 60.244 43.478 0.00 0.00 0.00 3.24
3388 3553 7.944061 TGAAATGGATGGATGTATTGATTGAC 58.056 34.615 0.00 0.00 0.00 3.18
3393 3558 3.897239 TGGATGTATTGATTGACCCACC 58.103 45.455 0.00 0.00 0.00 4.61
3395 3560 3.885297 GGATGTATTGATTGACCCACCTG 59.115 47.826 0.00 0.00 0.00 4.00
3400 3565 0.697658 TGATTGACCCACCTGCATCA 59.302 50.000 0.00 0.00 0.00 3.07
3416 3582 2.223665 GCATCACTTTGCCAGAATAGCC 60.224 50.000 0.00 0.00 36.60 3.93
3424 3590 2.060275 TGCCAGAATAGCCATCCTGAT 58.940 47.619 0.00 0.00 0.00 2.90
3428 3594 5.222192 TGCCAGAATAGCCATCCTGATAAAT 60.222 40.000 0.00 0.00 0.00 1.40
3439 3605 8.153550 AGCCATCCTGATAAATTTACAGTCTAG 58.846 37.037 18.33 9.29 0.00 2.43
3456 3622 8.713708 ACAGTCTAGTATATACCTGCTCAAAT 57.286 34.615 9.32 0.00 0.00 2.32
3461 3627 9.314133 TCTAGTATATACCTGCTCAAATGTCAT 57.686 33.333 9.32 0.00 0.00 3.06
3463 3629 7.966812 AGTATATACCTGCTCAAATGTCATGA 58.033 34.615 9.32 0.00 0.00 3.07
3470 3636 5.754406 CCTGCTCAAATGTCATGAACAAAAA 59.246 36.000 0.00 0.00 42.37 1.94
3472 3638 5.754406 TGCTCAAATGTCATGAACAAAAAGG 59.246 36.000 0.00 0.00 42.37 3.11
3478 3644 4.531854 TGTCATGAACAAAAAGGACCTGA 58.468 39.130 0.00 0.00 34.03 3.86
3480 3646 5.163561 TGTCATGAACAAAAAGGACCTGAAC 60.164 40.000 0.00 0.00 34.03 3.18
3525 3693 2.916111 GTGTATTCCACAACACGCAAG 58.084 47.619 0.00 0.00 43.92 4.01
3526 3694 1.876799 TGTATTCCACAACACGCAAGG 59.123 47.619 0.00 0.00 36.17 3.61
3527 3695 0.878416 TATTCCACAACACGCAAGGC 59.122 50.000 0.00 0.00 46.39 4.35
3528 3696 1.805428 ATTCCACAACACGCAAGGCC 61.805 55.000 0.00 0.00 46.39 5.19
3529 3697 2.902423 TTCCACAACACGCAAGGCCT 62.902 55.000 0.00 0.00 46.39 5.19
3530 3698 2.639286 CACAACACGCAAGGCCTC 59.361 61.111 5.23 0.00 46.39 4.70
3531 3699 2.186160 CACAACACGCAAGGCCTCA 61.186 57.895 5.23 0.00 46.39 3.86
3532 3700 1.228245 ACAACACGCAAGGCCTCAT 60.228 52.632 5.23 0.00 46.39 2.90
3533 3701 1.210931 CAACACGCAAGGCCTCATG 59.789 57.895 5.23 1.88 46.39 3.07
3534 3702 1.228245 AACACGCAAGGCCTCATGT 60.228 52.632 5.23 5.44 46.39 3.21
3535 3703 0.036164 AACACGCAAGGCCTCATGTA 59.964 50.000 5.23 0.00 46.39 2.29
3545 3779 1.340017 GGCCTCATGTAGTTGGCTTCA 60.340 52.381 0.00 0.00 44.36 3.02
3561 3795 2.478539 GCTTCATTCTCAAATGGGACGC 60.479 50.000 0.00 0.00 42.19 5.19
3564 3798 0.392998 ATTCTCAAATGGGACGCGCT 60.393 50.000 5.73 0.00 0.00 5.92
3568 3802 1.135315 CAAATGGGACGCGCTTCTG 59.865 57.895 14.02 0.00 0.00 3.02
3569 3803 2.040544 AAATGGGACGCGCTTCTGG 61.041 57.895 14.02 0.00 0.00 3.86
3582 3822 1.887956 GCTTCTGGTGCCCTTTGATCA 60.888 52.381 0.00 0.00 0.00 2.92
3615 3855 5.316987 AGTAAGAAAGCATTTGCAGTAGGT 58.683 37.500 5.20 0.00 39.27 3.08
3617 3857 5.886960 AAGAAAGCATTTGCAGTAGGTAG 57.113 39.130 5.20 0.00 39.27 3.18
3619 3859 2.044123 AGCATTTGCAGTAGGTAGCC 57.956 50.000 5.20 0.00 45.16 3.93
3623 3863 1.952621 TTTGCAGTAGGTAGCCCTCT 58.047 50.000 0.00 0.00 41.45 3.69
3624 3864 2.840640 TTGCAGTAGGTAGCCCTCTA 57.159 50.000 0.00 0.00 41.45 2.43
3625 3865 3.330126 TTGCAGTAGGTAGCCCTCTAT 57.670 47.619 0.00 0.00 41.45 1.98
3626 3866 3.330126 TGCAGTAGGTAGCCCTCTATT 57.670 47.619 0.00 0.00 41.45 1.73
3653 3894 6.445357 TTCGGGGTAAAAATAGAAAGCATC 57.555 37.500 0.00 0.00 0.00 3.91
3654 3895 4.573201 TCGGGGTAAAAATAGAAAGCATCG 59.427 41.667 0.00 0.00 0.00 3.84
3669 3910 2.860062 GCATCGGCTCAATATCATTGC 58.140 47.619 0.00 0.00 36.96 3.56
3670 3911 2.227149 GCATCGGCTCAATATCATTGCA 59.773 45.455 0.00 0.00 36.96 4.08
3671 3912 3.669824 GCATCGGCTCAATATCATTGCAG 60.670 47.826 0.00 0.00 36.96 4.41
3672 3913 3.198409 TCGGCTCAATATCATTGCAGT 57.802 42.857 0.00 0.00 0.00 4.40
3673 3914 2.874086 TCGGCTCAATATCATTGCAGTG 59.126 45.455 2.16 2.16 0.00 3.66
3674 3915 2.031420 CGGCTCAATATCATTGCAGTGG 60.031 50.000 9.56 0.00 0.00 4.00
3675 3916 2.954318 GGCTCAATATCATTGCAGTGGT 59.046 45.455 9.56 4.57 0.00 4.16
3676 3917 3.243301 GGCTCAATATCATTGCAGTGGTG 60.243 47.826 9.56 3.51 0.00 4.17
3677 3918 3.379372 GCTCAATATCATTGCAGTGGTGT 59.621 43.478 9.56 0.00 0.00 4.16
3678 3919 4.576053 GCTCAATATCATTGCAGTGGTGTA 59.424 41.667 9.56 1.40 0.00 2.90
3679 3920 5.066375 GCTCAATATCATTGCAGTGGTGTAA 59.934 40.000 9.56 0.00 32.32 2.41
3680 3921 6.404623 GCTCAATATCATTGCAGTGGTGTAAA 60.405 38.462 9.56 0.00 31.46 2.01
3681 3922 7.643569 TCAATATCATTGCAGTGGTGTAAAT 57.356 32.000 9.56 0.00 31.46 1.40
3682 3923 8.065473 TCAATATCATTGCAGTGGTGTAAATT 57.935 30.769 9.56 0.00 31.46 1.82
3683 3924 7.975058 TCAATATCATTGCAGTGGTGTAAATTG 59.025 33.333 9.56 8.99 31.46 2.32
3684 3925 4.517952 TCATTGCAGTGGTGTAAATTGG 57.482 40.909 9.56 0.00 31.46 3.16
3685 3926 3.894427 TCATTGCAGTGGTGTAAATTGGT 59.106 39.130 9.56 0.00 31.46 3.67
3686 3927 3.724508 TTGCAGTGGTGTAAATTGGTG 57.275 42.857 0.00 0.00 0.00 4.17
3687 3928 2.937519 TGCAGTGGTGTAAATTGGTGA 58.062 42.857 0.00 0.00 0.00 4.02
3688 3929 3.291584 TGCAGTGGTGTAAATTGGTGAA 58.708 40.909 0.00 0.00 0.00 3.18
3689 3930 3.894427 TGCAGTGGTGTAAATTGGTGAAT 59.106 39.130 0.00 0.00 0.00 2.57
3690 3931 5.073428 TGCAGTGGTGTAAATTGGTGAATA 58.927 37.500 0.00 0.00 0.00 1.75
3691 3932 5.048364 TGCAGTGGTGTAAATTGGTGAATAC 60.048 40.000 0.00 0.00 0.00 1.89
3706 3947 5.690865 GGTGAATACCATCCAATGTAAGGA 58.309 41.667 0.00 0.00 46.71 3.36
3707 3948 6.306987 GGTGAATACCATCCAATGTAAGGAT 58.693 40.000 0.00 0.00 46.61 3.24
3714 3955 3.668141 TCCAATGTAAGGATGGCATGT 57.332 42.857 3.81 0.00 34.13 3.21
3715 3956 3.289836 TCCAATGTAAGGATGGCATGTG 58.710 45.455 3.81 0.00 34.13 3.21
3716 3957 2.363038 CCAATGTAAGGATGGCATGTGG 59.637 50.000 3.81 0.00 0.00 4.17
3717 3958 2.363038 CAATGTAAGGATGGCATGTGGG 59.637 50.000 3.81 0.00 0.00 4.61
3718 3959 0.258484 TGTAAGGATGGCATGTGGGG 59.742 55.000 3.81 0.00 0.00 4.96
3719 3960 1.109323 GTAAGGATGGCATGTGGGGC 61.109 60.000 3.81 0.00 0.00 5.80
3736 3977 2.785868 GCCTGAGGCCACATGTTAG 58.214 57.895 13.77 0.00 44.06 2.34
3737 3978 0.035056 GCCTGAGGCCACATGTTAGT 60.035 55.000 13.77 0.00 44.06 2.24
3738 3979 1.742761 CCTGAGGCCACATGTTAGTG 58.257 55.000 5.01 0.00 39.21 2.74
3739 3980 1.003580 CCTGAGGCCACATGTTAGTGT 59.996 52.381 5.01 0.00 37.82 3.55
3740 3981 2.350522 CTGAGGCCACATGTTAGTGTC 58.649 52.381 5.01 0.00 37.82 3.67
3741 3982 1.696884 TGAGGCCACATGTTAGTGTCA 59.303 47.619 5.01 0.00 37.82 3.58
3742 3983 2.105649 TGAGGCCACATGTTAGTGTCAA 59.894 45.455 5.01 0.00 37.82 3.18
3743 3984 3.244875 TGAGGCCACATGTTAGTGTCAAT 60.245 43.478 5.01 0.00 37.82 2.57
3744 3985 3.347216 AGGCCACATGTTAGTGTCAATC 58.653 45.455 5.01 0.00 37.82 2.67
3745 3986 2.423538 GGCCACATGTTAGTGTCAATCC 59.576 50.000 0.00 0.00 37.82 3.01
3746 3987 3.347216 GCCACATGTTAGTGTCAATCCT 58.653 45.455 0.00 0.00 37.82 3.24
3747 3988 3.127548 GCCACATGTTAGTGTCAATCCTG 59.872 47.826 0.00 0.00 37.82 3.86
3748 3989 3.691118 CCACATGTTAGTGTCAATCCTGG 59.309 47.826 0.00 0.00 37.82 4.45
3749 3990 4.565444 CCACATGTTAGTGTCAATCCTGGA 60.565 45.833 0.00 0.00 37.82 3.86
3750 3991 4.393062 CACATGTTAGTGTCAATCCTGGAC 59.607 45.833 0.00 0.00 34.83 4.02
3751 3992 3.313012 TGTTAGTGTCAATCCTGGACG 57.687 47.619 0.00 0.00 38.10 4.79
3752 3993 2.000447 GTTAGTGTCAATCCTGGACGC 59.000 52.381 0.00 0.00 44.11 5.19
3755 3996 2.604046 GTGTCAATCCTGGACGCTAT 57.396 50.000 0.00 0.00 41.37 2.97
3756 3997 2.906354 GTGTCAATCCTGGACGCTATT 58.094 47.619 0.00 0.00 41.37 1.73
3757 3998 2.866762 GTGTCAATCCTGGACGCTATTC 59.133 50.000 0.00 0.00 41.37 1.75
3758 3999 2.766263 TGTCAATCCTGGACGCTATTCT 59.234 45.455 0.00 0.00 38.10 2.40
3759 4000 3.181475 TGTCAATCCTGGACGCTATTCTC 60.181 47.826 0.00 0.00 38.10 2.87
3760 4001 3.068873 GTCAATCCTGGACGCTATTCTCT 59.931 47.826 0.00 0.00 0.00 3.10
3761 4002 3.706594 TCAATCCTGGACGCTATTCTCTT 59.293 43.478 0.00 0.00 0.00 2.85
3762 4003 3.742433 ATCCTGGACGCTATTCTCTTG 57.258 47.619 0.00 0.00 0.00 3.02
3763 4004 1.137086 TCCTGGACGCTATTCTCTTGC 59.863 52.381 0.00 0.00 0.00 4.01
3770 4011 1.449789 CGCTATTCTCTTGCGTGATCG 59.550 52.381 0.00 0.00 42.89 3.69
3771 4012 2.732366 GCTATTCTCTTGCGTGATCGA 58.268 47.619 0.00 0.00 39.71 3.59
3772 4013 2.723658 GCTATTCTCTTGCGTGATCGAG 59.276 50.000 0.00 0.00 39.71 4.04
3773 4014 1.565305 ATTCTCTTGCGTGATCGAGC 58.435 50.000 0.00 0.00 39.71 5.03
3774 4015 0.243636 TTCTCTTGCGTGATCGAGCA 59.756 50.000 0.00 0.00 42.15 4.26
3780 4021 3.590720 TTGCGTGATCGAGCAATATTG 57.409 42.857 19.47 11.27 46.83 1.90
3781 4022 1.261354 TGCGTGATCGAGCAATATTGC 59.739 47.619 29.21 29.21 44.83 3.56
3782 4023 1.398960 GCGTGATCGAGCAATATTGCC 60.399 52.381 31.77 22.70 45.22 4.52
3783 4024 4.558145 GCGTGATCGAGCAATATTGCCC 62.558 54.545 31.77 22.41 45.22 5.36
3798 4039 8.634475 CAATATTGCCCTTTAAAGTAAGCTTC 57.366 34.615 14.03 0.00 33.01 3.86
3799 4040 8.470002 CAATATTGCCCTTTAAAGTAAGCTTCT 58.530 33.333 14.03 0.00 33.01 2.85
3800 4041 5.705609 TTGCCCTTTAAAGTAAGCTTCTG 57.294 39.130 14.03 0.00 33.01 3.02
3801 4042 4.079253 TGCCCTTTAAAGTAAGCTTCTGG 58.921 43.478 14.03 5.85 33.01 3.86
3802 4043 4.079970 GCCCTTTAAAGTAAGCTTCTGGT 58.920 43.478 14.03 0.00 33.01 4.00
3803 4044 5.221966 TGCCCTTTAAAGTAAGCTTCTGGTA 60.222 40.000 14.03 1.87 33.01 3.25
3804 4045 5.123502 GCCCTTTAAAGTAAGCTTCTGGTAC 59.876 44.000 14.03 0.00 33.01 3.34
3805 4046 5.646793 CCCTTTAAAGTAAGCTTCTGGTACC 59.353 44.000 14.03 4.43 33.01 3.34
3806 4047 6.235664 CCTTTAAAGTAAGCTTCTGGTACCA 58.764 40.000 15.39 15.39 33.01 3.25
3807 4048 6.371825 CCTTTAAAGTAAGCTTCTGGTACCAG 59.628 42.308 32.61 32.61 44.86 4.00
3808 4049 3.983044 AAGTAAGCTTCTGGTACCAGG 57.017 47.619 35.94 24.13 43.75 4.45
3809 4050 3.185880 AGTAAGCTTCTGGTACCAGGA 57.814 47.619 35.94 29.58 43.75 3.86
3810 4051 3.725634 AGTAAGCTTCTGGTACCAGGAT 58.274 45.455 35.94 20.56 43.75 3.24
3811 4052 3.452627 AGTAAGCTTCTGGTACCAGGATG 59.547 47.826 35.94 26.32 43.75 3.51
3812 4053 2.254152 AGCTTCTGGTACCAGGATGA 57.746 50.000 35.94 18.48 43.75 2.92
3813 4054 2.551270 AGCTTCTGGTACCAGGATGAA 58.449 47.619 35.94 23.66 43.75 2.57
3814 4055 2.237392 AGCTTCTGGTACCAGGATGAAC 59.763 50.000 35.94 19.81 43.75 3.18
3815 4056 2.027192 GCTTCTGGTACCAGGATGAACA 60.027 50.000 35.94 16.50 43.75 3.18
3816 4057 3.600388 CTTCTGGTACCAGGATGAACAC 58.400 50.000 35.94 0.00 43.75 3.32
3817 4058 2.615391 TCTGGTACCAGGATGAACACA 58.385 47.619 35.94 15.08 43.75 3.72
3818 4059 2.976185 TCTGGTACCAGGATGAACACAA 59.024 45.455 35.94 14.37 43.75 3.33
3819 4060 3.392947 TCTGGTACCAGGATGAACACAAA 59.607 43.478 35.94 13.87 43.75 2.83
3820 4061 4.042809 TCTGGTACCAGGATGAACACAAAT 59.957 41.667 35.94 0.00 43.75 2.32
3821 4062 4.331968 TGGTACCAGGATGAACACAAATC 58.668 43.478 11.60 0.00 39.69 2.17
3822 4063 3.694566 GGTACCAGGATGAACACAAATCC 59.305 47.826 7.15 0.00 42.39 3.01
3823 4064 2.436417 ACCAGGATGAACACAAATCCG 58.564 47.619 0.00 0.00 45.94 4.18
3824 4065 1.745087 CCAGGATGAACACAAATCCGG 59.255 52.381 0.00 0.00 45.94 5.14
3825 4066 2.436417 CAGGATGAACACAAATCCGGT 58.564 47.619 0.00 0.00 45.94 5.28
3826 4067 2.819608 CAGGATGAACACAAATCCGGTT 59.180 45.455 0.00 0.00 45.94 4.44
3827 4068 3.255642 CAGGATGAACACAAATCCGGTTT 59.744 43.478 0.00 0.00 45.94 3.27
3828 4069 4.851907 CAGGATGAACACAAATCCGGTTTG 60.852 45.833 20.80 20.80 45.94 2.93
3837 4078 4.053469 CAAATCCGGTTTGTTGTTTCCT 57.947 40.909 16.63 0.00 41.80 3.36
3838 4079 4.438148 CAAATCCGGTTTGTTGTTTCCTT 58.562 39.130 16.63 0.00 41.80 3.36
3839 4080 3.726291 ATCCGGTTTGTTGTTTCCTTG 57.274 42.857 0.00 0.00 0.00 3.61
3840 4081 2.448453 TCCGGTTTGTTGTTTCCTTGT 58.552 42.857 0.00 0.00 0.00 3.16
3841 4082 2.424246 TCCGGTTTGTTGTTTCCTTGTC 59.576 45.455 0.00 0.00 0.00 3.18
3842 4083 2.164624 CCGGTTTGTTGTTTCCTTGTCA 59.835 45.455 0.00 0.00 0.00 3.58
3843 4084 3.175929 CGGTTTGTTGTTTCCTTGTCAC 58.824 45.455 0.00 0.00 0.00 3.67
3844 4085 3.175929 GGTTTGTTGTTTCCTTGTCACG 58.824 45.455 0.00 0.00 0.00 4.35
3845 4086 3.366577 GGTTTGTTGTTTCCTTGTCACGT 60.367 43.478 0.00 0.00 0.00 4.49
3846 4087 4.142643 GGTTTGTTGTTTCCTTGTCACGTA 60.143 41.667 0.00 0.00 0.00 3.57
3847 4088 4.603231 TTGTTGTTTCCTTGTCACGTAC 57.397 40.909 0.00 0.00 0.00 3.67
3848 4089 3.597255 TGTTGTTTCCTTGTCACGTACA 58.403 40.909 0.00 0.00 35.88 2.90
3849 4090 3.371591 TGTTGTTTCCTTGTCACGTACAC 59.628 43.478 0.00 0.00 38.00 2.90
3850 4091 3.530265 TGTTTCCTTGTCACGTACACT 57.470 42.857 0.00 0.00 38.00 3.55
3851 4092 3.864243 TGTTTCCTTGTCACGTACACTT 58.136 40.909 0.00 0.00 38.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.720769 AGATACATTTTAGATAACAATACGGGG 57.279 33.333 0.00 0.00 0.00 5.73
84 85 8.328758 ACTGGAGATGTTAGGTTCATCATTTTA 58.671 33.333 8.30 0.00 42.63 1.52
117 118 4.447724 TCTGACGTTAAGATCTGCAAACAC 59.552 41.667 0.00 0.60 0.00 3.32
258 264 0.034896 AGACCTAACAGCAACACGGG 59.965 55.000 0.00 0.00 0.00 5.28
351 360 2.586258 ACGCAGCACTCTACAATAGG 57.414 50.000 0.00 0.00 0.00 2.57
558 567 0.971386 TTATCCGCCCTATTCCGACC 59.029 55.000 0.00 0.00 0.00 4.79
569 578 3.486383 TGGGAAAGATGAATTATCCGCC 58.514 45.455 0.00 0.00 36.40 6.13
570 579 5.464168 CAATGGGAAAGATGAATTATCCGC 58.536 41.667 0.00 0.00 36.40 5.54
571 580 5.242393 AGCAATGGGAAAGATGAATTATCCG 59.758 40.000 0.00 0.00 36.40 4.18
583 592 4.461781 AGAACAATCAGAGCAATGGGAAAG 59.538 41.667 0.00 0.00 0.00 2.62
586 595 3.726557 AGAACAATCAGAGCAATGGGA 57.273 42.857 0.00 0.00 0.00 4.37
599 608 6.868622 AGCGTGTAGAGATCTTTAGAACAAT 58.131 36.000 0.00 0.00 0.00 2.71
603 612 4.634883 ACGAGCGTGTAGAGATCTTTAGAA 59.365 41.667 0.00 0.00 0.00 2.10
609 618 2.747989 TCAAACGAGCGTGTAGAGATCT 59.252 45.455 0.00 0.00 0.00 2.75
610 619 3.102276 CTCAAACGAGCGTGTAGAGATC 58.898 50.000 11.63 0.00 0.00 2.75
611 620 2.732597 GCTCAAACGAGCGTGTAGAGAT 60.733 50.000 17.73 0.00 46.06 2.75
612 621 1.401148 GCTCAAACGAGCGTGTAGAGA 60.401 52.381 17.73 4.34 46.06 3.10
613 622 0.985549 GCTCAAACGAGCGTGTAGAG 59.014 55.000 12.33 12.33 46.06 2.43
614 623 3.102515 GCTCAAACGAGCGTGTAGA 57.897 52.632 0.00 0.00 46.06 2.59
622 631 6.655062 TGTTTAATGTTACAGCTCAAACGAG 58.345 36.000 0.00 0.00 0.00 4.18
624 633 7.851822 AATGTTTAATGTTACAGCTCAAACG 57.148 32.000 0.00 0.00 0.00 3.60
661 675 1.302907 ACCTCCAGATTGCCTCCATT 58.697 50.000 0.00 0.00 0.00 3.16
662 676 1.213926 GAACCTCCAGATTGCCTCCAT 59.786 52.381 0.00 0.00 0.00 3.41
663 677 0.620556 GAACCTCCAGATTGCCTCCA 59.379 55.000 0.00 0.00 0.00 3.86
666 680 1.366319 AGTGAACCTCCAGATTGCCT 58.634 50.000 0.00 0.00 0.00 4.75
667 681 1.815003 CAAGTGAACCTCCAGATTGCC 59.185 52.381 0.00 0.00 0.00 4.52
668 682 1.815003 CCAAGTGAACCTCCAGATTGC 59.185 52.381 0.00 0.00 0.00 3.56
669 683 1.815003 GCCAAGTGAACCTCCAGATTG 59.185 52.381 0.00 0.00 0.00 2.67
670 684 1.425066 TGCCAAGTGAACCTCCAGATT 59.575 47.619 0.00 0.00 0.00 2.40
671 685 1.004044 CTGCCAAGTGAACCTCCAGAT 59.996 52.381 0.00 0.00 0.00 2.90
672 686 0.397941 CTGCCAAGTGAACCTCCAGA 59.602 55.000 0.00 0.00 0.00 3.86
673 687 0.109342 ACTGCCAAGTGAACCTCCAG 59.891 55.000 0.00 0.00 34.48 3.86
674 688 1.429930 TACTGCCAAGTGAACCTCCA 58.570 50.000 0.00 0.00 37.19 3.86
675 689 2.561478 TTACTGCCAAGTGAACCTCC 57.439 50.000 0.00 0.00 37.19 4.30
676 690 4.911514 TTTTTACTGCCAAGTGAACCTC 57.088 40.909 0.00 0.00 37.19 3.85
694 708 9.334693 CGACTGTACTAATTACGAGTACTTTTT 57.665 33.333 14.92 1.52 46.30 1.94
702 716 7.020010 AGTGAAACGACTGTACTAATTACGAG 58.980 38.462 0.00 0.00 45.86 4.18
703 717 6.902341 AGTGAAACGACTGTACTAATTACGA 58.098 36.000 0.00 0.00 45.86 3.43
704 718 7.536622 AGAAGTGAAACGACTGTACTAATTACG 59.463 37.037 0.00 0.00 45.86 3.18
705 719 8.739649 AGAAGTGAAACGACTGTACTAATTAC 57.260 34.615 0.00 0.00 45.86 1.89
706 720 8.570488 TGAGAAGTGAAACGACTGTACTAATTA 58.430 33.333 0.00 0.00 45.86 1.40
707 721 7.431249 TGAGAAGTGAAACGACTGTACTAATT 58.569 34.615 0.00 0.00 45.86 1.40
708 722 6.978338 TGAGAAGTGAAACGACTGTACTAAT 58.022 36.000 0.00 0.00 45.86 1.73
709 723 6.039047 ACTGAGAAGTGAAACGACTGTACTAA 59.961 38.462 0.00 0.00 45.86 2.24
710 724 5.530171 ACTGAGAAGTGAAACGACTGTACTA 59.470 40.000 0.00 0.00 45.86 1.82
711 725 4.338682 ACTGAGAAGTGAAACGACTGTACT 59.661 41.667 0.00 0.00 45.86 2.73
712 726 4.608951 ACTGAGAAGTGAAACGACTGTAC 58.391 43.478 0.00 0.00 45.86 2.90
713 727 4.913335 ACTGAGAAGTGAAACGACTGTA 57.087 40.909 0.00 0.00 45.86 2.74
724 738 7.168972 CAGTGAAGTTTAGAGAACTGAGAAGTG 59.831 40.741 0.00 0.00 37.76 3.16
725 739 7.068839 TCAGTGAAGTTTAGAGAACTGAGAAGT 59.931 37.037 0.00 0.00 39.17 3.01
729 743 6.090628 GCATCAGTGAAGTTTAGAGAACTGAG 59.909 42.308 0.00 3.63 45.04 3.35
732 746 6.107901 AGCATCAGTGAAGTTTAGAGAACT 57.892 37.500 0.00 0.00 0.00 3.01
734 748 7.233389 ACTAGCATCAGTGAAGTTTAGAGAA 57.767 36.000 0.00 0.00 0.00 2.87
735 749 6.842437 ACTAGCATCAGTGAAGTTTAGAGA 57.158 37.500 0.00 0.00 0.00 3.10
748 762 3.599730 TCACTTGACCACTAGCATCAG 57.400 47.619 0.00 0.00 0.00 2.90
752 766 4.344978 ACTAGATCACTTGACCACTAGCA 58.655 43.478 0.00 0.00 33.33 3.49
753 767 4.993029 ACTAGATCACTTGACCACTAGC 57.007 45.455 0.00 0.00 33.33 3.42
754 768 7.923344 CCATTTACTAGATCACTTGACCACTAG 59.077 40.741 0.00 0.00 34.72 2.57
755 769 7.399191 ACCATTTACTAGATCACTTGACCACTA 59.601 37.037 0.00 0.00 0.00 2.74
756 770 6.213600 ACCATTTACTAGATCACTTGACCACT 59.786 38.462 0.00 0.00 0.00 4.00
757 771 6.407202 ACCATTTACTAGATCACTTGACCAC 58.593 40.000 0.00 0.00 0.00 4.16
758 772 6.620877 ACCATTTACTAGATCACTTGACCA 57.379 37.500 0.00 0.00 0.00 4.02
759 773 7.331791 AGAACCATTTACTAGATCACTTGACC 58.668 38.462 0.00 0.00 0.00 4.02
760 774 8.779354 AAGAACCATTTACTAGATCACTTGAC 57.221 34.615 0.00 0.00 0.00 3.18
761 775 9.871238 GTAAGAACCATTTACTAGATCACTTGA 57.129 33.333 0.00 0.00 0.00 3.02
777 792 5.010012 CACCAGCAAGAAAAGTAAGAACCAT 59.990 40.000 0.00 0.00 0.00 3.55
786 801 3.018423 AGAACCACCAGCAAGAAAAGT 57.982 42.857 0.00 0.00 0.00 2.66
787 802 4.114794 CAAAGAACCACCAGCAAGAAAAG 58.885 43.478 0.00 0.00 0.00 2.27
788 803 3.678529 GCAAAGAACCACCAGCAAGAAAA 60.679 43.478 0.00 0.00 0.00 2.29
790 805 1.408702 GCAAAGAACCACCAGCAAGAA 59.591 47.619 0.00 0.00 0.00 2.52
792 807 0.746063 TGCAAAGAACCACCAGCAAG 59.254 50.000 0.00 0.00 0.00 4.01
793 808 1.340889 GATGCAAAGAACCACCAGCAA 59.659 47.619 0.00 0.00 35.45 3.91
794 809 0.961019 GATGCAAAGAACCACCAGCA 59.039 50.000 0.00 0.00 36.34 4.41
795 810 1.200948 GAGATGCAAAGAACCACCAGC 59.799 52.381 0.00 0.00 0.00 4.85
796 811 2.787994 AGAGATGCAAAGAACCACCAG 58.212 47.619 0.00 0.00 0.00 4.00
797 812 2.957402 AGAGATGCAAAGAACCACCA 57.043 45.000 0.00 0.00 0.00 4.17
798 813 4.775236 AGATAGAGATGCAAAGAACCACC 58.225 43.478 0.00 0.00 0.00 4.61
799 814 5.669477 AGAGATAGAGATGCAAAGAACCAC 58.331 41.667 0.00 0.00 0.00 4.16
800 815 5.423290 TGAGAGATAGAGATGCAAAGAACCA 59.577 40.000 0.00 0.00 0.00 3.67
801 816 5.911752 TGAGAGATAGAGATGCAAAGAACC 58.088 41.667 0.00 0.00 0.00 3.62
802 817 6.815641 TGTTGAGAGATAGAGATGCAAAGAAC 59.184 38.462 0.00 0.00 0.00 3.01
803 818 6.939622 TGTTGAGAGATAGAGATGCAAAGAA 58.060 36.000 0.00 0.00 0.00 2.52
804 819 6.535963 TGTTGAGAGATAGAGATGCAAAGA 57.464 37.500 0.00 0.00 0.00 2.52
805 820 7.789273 AATGTTGAGAGATAGAGATGCAAAG 57.211 36.000 0.00 0.00 0.00 2.77
806 821 7.712639 GGTAATGTTGAGAGATAGAGATGCAAA 59.287 37.037 0.00 0.00 0.00 3.68
807 822 7.212976 GGTAATGTTGAGAGATAGAGATGCAA 58.787 38.462 0.00 0.00 0.00 4.08
808 823 6.239430 GGGTAATGTTGAGAGATAGAGATGCA 60.239 42.308 0.00 0.00 0.00 3.96
809 824 6.162777 GGGTAATGTTGAGAGATAGAGATGC 58.837 44.000 0.00 0.00 0.00 3.91
810 825 6.015856 ACGGGTAATGTTGAGAGATAGAGATG 60.016 42.308 0.00 0.00 0.00 2.90
811 826 6.071984 ACGGGTAATGTTGAGAGATAGAGAT 58.928 40.000 0.00 0.00 0.00 2.75
812 827 5.446860 ACGGGTAATGTTGAGAGATAGAGA 58.553 41.667 0.00 0.00 0.00 3.10
813 828 5.776173 ACGGGTAATGTTGAGAGATAGAG 57.224 43.478 0.00 0.00 0.00 2.43
814 829 5.655090 TGAACGGGTAATGTTGAGAGATAGA 59.345 40.000 0.00 0.00 0.00 1.98
815 830 5.902681 TGAACGGGTAATGTTGAGAGATAG 58.097 41.667 0.00 0.00 0.00 2.08
816 831 5.163447 CCTGAACGGGTAATGTTGAGAGATA 60.163 44.000 0.00 0.00 33.13 1.98
817 832 4.383118 CCTGAACGGGTAATGTTGAGAGAT 60.383 45.833 0.00 0.00 33.13 2.75
818 833 3.056107 CCTGAACGGGTAATGTTGAGAGA 60.056 47.826 0.00 0.00 33.13 3.10
828 843 1.829222 GATCAGGTCCTGAACGGGTAA 59.171 52.381 25.37 0.00 44.04 2.85
831 846 0.461961 GAGATCAGGTCCTGAACGGG 59.538 60.000 25.37 0.00 44.04 5.28
836 851 2.557555 ACCATGAGATCAGGTCCTGA 57.442 50.000 23.92 23.92 44.99 3.86
837 852 2.770802 AGAACCATGAGATCAGGTCCTG 59.229 50.000 13.21 13.21 33.74 3.86
859 874 1.343789 TGTGGGCACAATCACCAAATG 59.656 47.619 0.00 0.00 38.56 2.32
861 876 0.749649 GTGTGGGCACAATCACCAAA 59.250 50.000 0.00 0.00 43.77 3.28
864 879 2.625823 CGGTGTGGGCACAATCACC 61.626 63.158 16.88 16.88 46.95 4.02
867 882 1.240256 TTTACGGTGTGGGCACAATC 58.760 50.000 0.00 0.00 46.95 2.67
868 883 1.338655 GTTTTACGGTGTGGGCACAAT 59.661 47.619 0.00 0.00 46.95 2.71
869 884 0.739561 GTTTTACGGTGTGGGCACAA 59.260 50.000 0.00 0.00 46.95 3.33
870 885 0.393944 TGTTTTACGGTGTGGGCACA 60.394 50.000 0.00 0.00 46.95 4.57
871 886 0.955905 ATGTTTTACGGTGTGGGCAC 59.044 50.000 0.00 0.00 44.53 5.01
872 887 1.609555 GAATGTTTTACGGTGTGGGCA 59.390 47.619 0.00 0.00 0.00 5.36
873 888 1.068125 GGAATGTTTTACGGTGTGGGC 60.068 52.381 0.00 0.00 0.00 5.36
875 890 3.992260 TTGGAATGTTTTACGGTGTGG 57.008 42.857 0.00 0.00 0.00 4.17
876 891 5.285651 ACAATTGGAATGTTTTACGGTGTG 58.714 37.500 10.83 0.00 0.00 3.82
877 892 5.523438 ACAATTGGAATGTTTTACGGTGT 57.477 34.783 10.83 0.00 0.00 4.16
878 893 6.836577 AAACAATTGGAATGTTTTACGGTG 57.163 33.333 10.83 0.00 45.97 4.94
899 914 9.332502 GAAGCCCCTCAAAAATAAAAGTAAAAA 57.667 29.630 0.00 0.00 0.00 1.94
903 918 6.078664 TGGAAGCCCCTCAAAAATAAAAGTA 58.921 36.000 0.00 0.00 35.38 2.24
909 924 6.446909 AAAAATGGAAGCCCCTCAAAAATA 57.553 33.333 0.00 0.00 35.38 1.40
910 925 4.999469 AAAATGGAAGCCCCTCAAAAAT 57.001 36.364 0.00 0.00 35.38 1.82
911 926 4.787135 AAAAATGGAAGCCCCTCAAAAA 57.213 36.364 0.00 0.00 35.38 1.94
931 946 7.918562 GCTTATTCACCACACAAAGTAGAAAAA 59.081 33.333 0.00 0.00 0.00 1.94
932 947 7.284489 AGCTTATTCACCACACAAAGTAGAAAA 59.716 33.333 0.00 0.00 0.00 2.29
933 948 6.770785 AGCTTATTCACCACACAAAGTAGAAA 59.229 34.615 0.00 0.00 0.00 2.52
934 949 6.204688 CAGCTTATTCACCACACAAAGTAGAA 59.795 38.462 0.00 0.00 0.00 2.10
935 950 5.700832 CAGCTTATTCACCACACAAAGTAGA 59.299 40.000 0.00 0.00 0.00 2.59
936 951 5.470098 ACAGCTTATTCACCACACAAAGTAG 59.530 40.000 0.00 0.00 0.00 2.57
937 952 5.238432 CACAGCTTATTCACCACACAAAGTA 59.762 40.000 0.00 0.00 0.00 2.24
943 958 2.154462 AGCACAGCTTATTCACCACAC 58.846 47.619 0.00 0.00 33.89 3.82
946 961 2.945008 GCATAGCACAGCTTATTCACCA 59.055 45.455 0.00 0.00 40.44 4.17
957 972 5.927954 AAAAATTGGTTTGCATAGCACAG 57.072 34.783 8.61 0.00 38.71 3.66
973 988 8.800370 TTTTGCAGGGAGAAAAACTAAAAATT 57.200 26.923 0.00 0.00 0.00 1.82
974 989 8.800370 TTTTTGCAGGGAGAAAAACTAAAAAT 57.200 26.923 0.00 0.00 0.00 1.82
1029 1059 4.244425 AGGATAATGAGACGGATGAACG 57.756 45.455 0.00 0.00 40.31 3.95
1032 1062 3.764434 GGCTAGGATAATGAGACGGATGA 59.236 47.826 0.00 0.00 0.00 2.92
1038 1068 4.299978 GTTCACGGCTAGGATAATGAGAC 58.700 47.826 0.00 0.00 0.00 3.36
1057 1126 2.434774 GTGTGGGGTGGGAGGTTC 59.565 66.667 0.00 0.00 0.00 3.62
1068 1137 0.322008 GAGCTTTGGAGAGGTGTGGG 60.322 60.000 0.00 0.00 0.00 4.61
1075 1152 2.883386 AGCAGTTTTGAGCTTTGGAGAG 59.117 45.455 0.00 0.00 38.01 3.20
1076 1153 2.880890 GAGCAGTTTTGAGCTTTGGAGA 59.119 45.455 0.00 0.00 42.04 3.71
1499 1585 0.257039 GCAACAGGAGGATGGTGGAT 59.743 55.000 0.00 0.00 38.38 3.41
1500 1586 0.842030 AGCAACAGGAGGATGGTGGA 60.842 55.000 0.00 0.00 38.38 4.02
1501 1587 0.393537 GAGCAACAGGAGGATGGTGG 60.394 60.000 0.00 0.00 38.38 4.61
1503 1589 0.908198 GAGAGCAACAGGAGGATGGT 59.092 55.000 0.00 0.00 0.00 3.55
1504 1590 1.202330 AGAGAGCAACAGGAGGATGG 58.798 55.000 0.00 0.00 0.00 3.51
1506 1592 1.480137 CGAAGAGAGCAACAGGAGGAT 59.520 52.381 0.00 0.00 0.00 3.24
1508 1594 0.605589 ACGAAGAGAGCAACAGGAGG 59.394 55.000 0.00 0.00 0.00 4.30
1509 1595 1.730772 CGACGAAGAGAGCAACAGGAG 60.731 57.143 0.00 0.00 0.00 3.69
1510 1596 0.241213 CGACGAAGAGAGCAACAGGA 59.759 55.000 0.00 0.00 0.00 3.86
1511 1597 0.241213 TCGACGAAGAGAGCAACAGG 59.759 55.000 0.00 0.00 0.00 4.00
1512 1598 1.612156 CTCGACGAAGAGAGCAACAG 58.388 55.000 0.00 0.00 40.57 3.16
1538 1624 0.674895 ACAGCCAAACCTGCTCGATC 60.675 55.000 0.00 0.00 36.81 3.69
1551 1637 1.526686 CAAGAGCACCACACAGCCA 60.527 57.895 0.00 0.00 0.00 4.75
1554 1640 1.947013 CAGCAAGAGCACCACACAG 59.053 57.895 0.00 0.00 45.49 3.66
1659 1745 1.162800 GGTCGATGGCATTGAGCTCC 61.163 60.000 30.55 19.41 44.79 4.70
1683 1769 1.153369 CCGCACCACAGTATCCCAG 60.153 63.158 0.00 0.00 0.00 4.45
1738 1833 2.013483 CACGCGCAAAATCGGCAAA 61.013 52.632 5.73 0.00 0.00 3.68
1739 1834 2.428236 CACGCGCAAAATCGGCAA 60.428 55.556 5.73 0.00 0.00 4.52
1740 1835 3.655031 ACACGCGCAAAATCGGCA 61.655 55.556 5.73 0.00 0.00 5.69
1741 1836 3.165318 CACACGCGCAAAATCGGC 61.165 61.111 5.73 0.00 0.00 5.54
1742 1837 2.501650 CCACACGCGCAAAATCGG 60.502 61.111 5.73 0.00 0.00 4.18
1743 1838 3.165318 GCCACACGCGCAAAATCG 61.165 61.111 5.73 0.00 0.00 3.34
1744 1839 2.804931 GGCCACACGCGCAAAATC 60.805 61.111 5.73 0.00 38.94 2.17
1745 1840 4.698651 CGGCCACACGCGCAAAAT 62.699 61.111 5.73 0.00 38.94 1.82
1767 1862 2.703409 CGAAAATGCCGGCTCTCG 59.297 61.111 29.70 23.76 38.88 4.04
1827 1922 1.444895 CTGCCGCATTCTTTGTGCC 60.445 57.895 0.00 0.00 39.39 5.01
1850 1945 5.050499 AGAGATTTCGCATCGATTCAACATC 60.050 40.000 0.00 0.00 35.23 3.06
1853 1948 4.033358 ACAGAGATTTCGCATCGATTCAAC 59.967 41.667 0.00 0.00 35.23 3.18
1860 1955 1.590238 GTGGACAGAGATTTCGCATCG 59.410 52.381 0.00 0.00 0.00 3.84
1883 1978 2.423538 AGTTGACAACAGGCAGAACAAC 59.576 45.455 20.08 0.00 37.14 3.32
1885 1980 2.418368 AGTTGACAACAGGCAGAACA 57.582 45.000 20.08 0.00 0.00 3.18
1901 2004 2.487762 CACCGCCAATGTATGACAAGTT 59.512 45.455 0.00 0.00 0.00 2.66
1912 2015 2.643551 AGGAAACTATCACCGCCAATG 58.356 47.619 0.00 0.00 40.61 2.82
1913 2016 3.366052 AAGGAAACTATCACCGCCAAT 57.634 42.857 0.00 0.00 42.68 3.16
1915 2018 2.871096 AAAGGAAACTATCACCGCCA 57.129 45.000 0.00 0.00 42.68 5.69
1916 2019 4.272748 GTCATAAAGGAAACTATCACCGCC 59.727 45.833 0.00 0.00 42.68 6.13
1917 2020 4.272748 GGTCATAAAGGAAACTATCACCGC 59.727 45.833 0.00 0.00 42.68 5.68
1918 2021 5.671493 AGGTCATAAAGGAAACTATCACCG 58.329 41.667 0.00 0.00 42.68 4.94
1920 2023 9.262358 GACATAGGTCATAAAGGAAACTATCAC 57.738 37.037 1.92 0.00 43.73 3.06
1939 2042 8.099364 ACAAACTTACAACAATCTGACATAGG 57.901 34.615 0.00 0.00 0.00 2.57
1959 2062 5.554822 TGTCCACAGAAACTGTTACAAAC 57.445 39.130 11.73 4.35 42.59 2.93
1989 2093 3.117491 AGATTGTGGACAGGCATATCG 57.883 47.619 0.00 0.00 0.00 2.92
2061 2165 4.891756 GGCACCTGTACTAGAGGTATAACA 59.108 45.833 4.59 0.00 42.25 2.41
2140 2245 6.515832 AGATTTGGAAACTCATGGTTCAAAC 58.484 36.000 12.10 8.83 35.75 2.93
2155 2260 9.793259 ACTACTGTCATCTAAAAAGATTTGGAA 57.207 29.630 0.00 0.00 39.15 3.53
2159 2264 9.574516 ACCAACTACTGTCATCTAAAAAGATTT 57.425 29.630 0.00 0.00 0.00 2.17
2189 2294 9.932207 TCGGTCAAGTCTAGTAAATCAAAATTA 57.068 29.630 0.00 0.00 0.00 1.40
2195 2300 8.234136 ACATATCGGTCAAGTCTAGTAAATCA 57.766 34.615 0.00 0.00 0.00 2.57
2202 2307 6.739112 TCATCAACATATCGGTCAAGTCTAG 58.261 40.000 0.00 0.00 0.00 2.43
2205 2312 6.851222 AATCATCAACATATCGGTCAAGTC 57.149 37.500 0.00 0.00 0.00 3.01
2280 2387 3.569250 TCCGCAAAGCCAATTAACTTC 57.431 42.857 0.00 0.00 0.00 3.01
2301 2408 3.493176 CCACAATGTCGGCAGATCTATGA 60.493 47.826 0.00 0.00 0.00 2.15
2313 2420 2.031245 TGCTACTTTTGCCACAATGTCG 60.031 45.455 0.00 0.00 0.00 4.35
2497 2605 7.201652 GCTCCTTTATCAAGTCTGGAATGTTAC 60.202 40.741 0.00 0.00 0.00 2.50
2504 2612 4.471025 TCATGCTCCTTTATCAAGTCTGGA 59.529 41.667 0.00 0.00 0.00 3.86
2510 2618 6.446781 ACAACATCATGCTCCTTTATCAAG 57.553 37.500 0.00 0.00 0.00 3.02
2511 2619 7.936496 TTACAACATCATGCTCCTTTATCAA 57.064 32.000 0.00 0.00 0.00 2.57
2552 2660 4.183865 CAGCTTCATCACGAGATTGGTAA 58.816 43.478 0.00 0.00 30.20 2.85
2555 2663 1.938577 CCAGCTTCATCACGAGATTGG 59.061 52.381 0.00 0.00 30.20 3.16
2558 2666 4.021894 GGTATACCAGCTTCATCACGAGAT 60.022 45.833 17.44 0.00 35.64 2.75
2649 2757 9.669353 CTGAATAACAGCATCAACAATATAACC 57.331 33.333 0.00 0.00 39.86 2.85
2652 2760 8.978874 ACCTGAATAACAGCATCAACAATATA 57.021 30.769 0.00 0.00 44.52 0.86
2656 2764 5.121611 CGTACCTGAATAACAGCATCAACAA 59.878 40.000 0.00 0.00 44.52 2.83
2657 2765 4.629634 CGTACCTGAATAACAGCATCAACA 59.370 41.667 0.00 0.00 44.52 3.33
2658 2766 4.868171 TCGTACCTGAATAACAGCATCAAC 59.132 41.667 0.00 0.00 44.52 3.18
2662 2770 5.069119 TCTCATCGTACCTGAATAACAGCAT 59.931 40.000 0.00 0.00 44.52 3.79
2665 2773 4.970611 CGTCTCATCGTACCTGAATAACAG 59.029 45.833 0.00 0.00 45.36 3.16
2670 2778 2.025155 AGCGTCTCATCGTACCTGAAT 58.975 47.619 0.00 0.00 0.00 2.57
2679 2787 2.876091 TCAGGTTTAAGCGTCTCATCG 58.124 47.619 0.00 0.00 0.00 3.84
2734 2842 9.345517 CATCAAAACACACTGGATAAACAATAG 57.654 33.333 0.00 0.00 0.00 1.73
2747 2855 8.559536 CACAAGTTAGATACATCAAAACACACT 58.440 33.333 9.01 0.00 31.38 3.55
2826 2934 4.880696 AGCCATTCAAACTAGCATTCTCTC 59.119 41.667 0.00 0.00 0.00 3.20
2852 2960 5.582550 TCTCATGTATTCGTCATGTGAGAC 58.417 41.667 3.51 0.00 42.03 3.36
2859 2968 5.127845 ACCAAGTCTCTCATGTATTCGTCAT 59.872 40.000 0.00 0.00 0.00 3.06
2870 2979 3.373439 GTCGTACGTACCAAGTCTCTCAT 59.627 47.826 19.67 0.00 0.00 2.90
2885 2994 3.154489 GCTAGAATATCTGCGTCGTACG 58.846 50.000 9.53 9.53 45.88 3.67
2890 2999 3.733224 CAGTGTGCTAGAATATCTGCGTC 59.267 47.826 0.00 0.00 0.00 5.19
2893 3002 6.686630 AGTATCAGTGTGCTAGAATATCTGC 58.313 40.000 0.00 0.00 0.00 4.26
2954 3063 4.851639 ATAGACAAGGGATGAAAGCAGT 57.148 40.909 0.00 0.00 0.00 4.40
2996 3139 6.541278 AGATGTGATCATGTATGTCAAACTGG 59.459 38.462 0.00 0.00 34.06 4.00
3091 3247 4.746611 TCATTCGAAGTGCACATATAGCTG 59.253 41.667 21.04 8.12 0.00 4.24
3108 3264 7.326063 GGTGTTTTTCTTTCCTACAATCATTCG 59.674 37.037 0.00 0.00 0.00 3.34
3131 3287 2.675844 TCAACAACTTGAACACTCGGTG 59.324 45.455 0.00 2.92 33.20 4.94
3132 3288 2.676342 GTCAACAACTTGAACACTCGGT 59.324 45.455 0.00 0.00 38.17 4.69
3133 3289 2.675844 TGTCAACAACTTGAACACTCGG 59.324 45.455 0.00 0.00 38.17 4.63
3135 3291 4.437390 CCACTGTCAACAACTTGAACACTC 60.437 45.833 0.00 0.00 38.17 3.51
3190 3347 1.628846 ACTTTGTGCGTCCCTAATCCT 59.371 47.619 0.00 0.00 0.00 3.24
3239 3396 4.545678 TGCATTCCTAATTATGGGTGCTT 58.454 39.130 19.66 0.00 37.44 3.91
3241 3398 4.342092 ACTTGCATTCCTAATTATGGGTGC 59.658 41.667 16.16 16.16 37.23 5.01
3242 3400 6.275335 CAACTTGCATTCCTAATTATGGGTG 58.725 40.000 0.00 0.00 0.00 4.61
3277 3435 1.821088 AACTAGGATGGCTTAGGGGG 58.179 55.000 0.00 0.00 0.00 5.40
3283 3441 5.951747 TGAAGCAAAATAACTAGGATGGCTT 59.048 36.000 0.00 0.00 41.29 4.35
3284 3442 5.358160 GTGAAGCAAAATAACTAGGATGGCT 59.642 40.000 0.00 0.00 0.00 4.75
3285 3443 5.125417 TGTGAAGCAAAATAACTAGGATGGC 59.875 40.000 0.00 0.00 0.00 4.40
3315 3480 2.602257 TGCTGTCCATAATCCTCGTG 57.398 50.000 0.00 0.00 0.00 4.35
3318 3483 5.065914 TGCTAATTGCTGTCCATAATCCTC 58.934 41.667 0.00 0.00 43.37 3.71
3323 3488 4.502105 TCCTGCTAATTGCTGTCCATAA 57.498 40.909 0.00 0.00 43.37 1.90
3346 3511 6.013553 TCCATTTCATTCAATTGGTGGTTCAT 60.014 34.615 5.42 0.00 36.99 2.57
3348 3513 5.792741 TCCATTTCATTCAATTGGTGGTTC 58.207 37.500 5.42 0.00 36.99 3.62
3388 3553 1.588082 GCAAAGTGATGCAGGTGGG 59.412 57.895 0.00 0.00 45.70 4.61
3395 3560 2.223665 GGCTATTCTGGCAAAGTGATGC 60.224 50.000 0.00 0.00 45.67 3.91
3400 3565 2.243221 AGGATGGCTATTCTGGCAAAGT 59.757 45.455 0.00 0.00 45.43 2.66
3428 3594 9.636789 TTGAGCAGGTATATACTAGACTGTAAA 57.363 33.333 12.54 5.37 0.00 2.01
3439 3605 8.499162 GTTCATGACATTTGAGCAGGTATATAC 58.501 37.037 4.14 4.14 0.00 1.47
3444 3610 4.650734 TGTTCATGACATTTGAGCAGGTA 58.349 39.130 0.00 0.00 31.75 3.08
3456 3622 4.531854 TCAGGTCCTTTTTGTTCATGACA 58.468 39.130 0.00 0.00 36.19 3.58
3461 3627 5.656416 AGAATGTTCAGGTCCTTTTTGTTCA 59.344 36.000 0.00 0.00 0.00 3.18
3463 3629 6.544928 AAGAATGTTCAGGTCCTTTTTGTT 57.455 33.333 0.00 0.00 0.00 2.83
3491 3657 6.948353 GTGGAATACACTTATACACATGCAG 58.052 40.000 0.00 0.00 46.72 4.41
3506 3674 1.876799 CCTTGCGTGTTGTGGAATACA 59.123 47.619 0.00 0.00 37.56 2.29
3507 3675 1.401018 GCCTTGCGTGTTGTGGAATAC 60.401 52.381 0.00 0.00 0.00 1.89
3508 3676 0.878416 GCCTTGCGTGTTGTGGAATA 59.122 50.000 0.00 0.00 0.00 1.75
3527 3695 4.521146 AGAATGAAGCCAACTACATGAGG 58.479 43.478 0.00 0.00 0.00 3.86
3528 3696 5.181009 TGAGAATGAAGCCAACTACATGAG 58.819 41.667 0.00 0.00 0.00 2.90
3529 3697 5.164620 TGAGAATGAAGCCAACTACATGA 57.835 39.130 0.00 0.00 0.00 3.07
3530 3698 5.885230 TTGAGAATGAAGCCAACTACATG 57.115 39.130 0.00 0.00 0.00 3.21
3531 3699 6.127535 CCATTTGAGAATGAAGCCAACTACAT 60.128 38.462 0.92 0.00 44.37 2.29
3532 3700 5.183713 CCATTTGAGAATGAAGCCAACTACA 59.816 40.000 0.92 0.00 44.37 2.74
3533 3701 5.393461 CCCATTTGAGAATGAAGCCAACTAC 60.393 44.000 0.92 0.00 44.37 2.73
3534 3702 4.706476 CCCATTTGAGAATGAAGCCAACTA 59.294 41.667 0.92 0.00 44.37 2.24
3535 3703 3.512724 CCCATTTGAGAATGAAGCCAACT 59.487 43.478 0.92 0.00 44.37 3.16
3545 3779 0.392998 AGCGCGTCCCATTTGAGAAT 60.393 50.000 8.43 0.00 0.00 2.40
3569 3803 6.206829 ACTTTAGTTAACTGATCAAAGGGCAC 59.793 38.462 23.13 0.00 0.00 5.01
3582 3822 9.678941 GCAAATGCTTTCTTACTTTAGTTAACT 57.321 29.630 13.68 13.68 38.21 2.24
3634 3875 4.607955 GCCGATGCTTTCTATTTTTACCC 58.392 43.478 0.00 0.00 33.53 3.69
3653 3894 2.031420 CCACTGCAATGATATTGAGCCG 60.031 50.000 0.00 0.00 0.00 5.52
3654 3895 2.954318 ACCACTGCAATGATATTGAGCC 59.046 45.455 0.00 0.00 0.00 4.70
3663 3904 3.894427 ACCAATTTACACCACTGCAATGA 59.106 39.130 0.00 0.00 0.00 2.57
3667 3908 2.937519 TCACCAATTTACACCACTGCA 58.062 42.857 0.00 0.00 0.00 4.41
3668 3909 4.519540 ATTCACCAATTTACACCACTGC 57.480 40.909 0.00 0.00 0.00 4.40
3669 3910 5.949735 GGTATTCACCAATTTACACCACTG 58.050 41.667 0.00 0.00 45.04 3.66
3683 3924 5.690865 TCCTTACATTGGATGGTATTCACC 58.309 41.667 0.98 0.00 46.00 4.02
3693 3934 3.893200 CACATGCCATCCTTACATTGGAT 59.107 43.478 0.00 0.00 44.44 3.41
3694 3935 3.289836 CACATGCCATCCTTACATTGGA 58.710 45.455 0.00 0.00 38.06 3.53
3695 3936 2.363038 CCACATGCCATCCTTACATTGG 59.637 50.000 0.00 0.00 0.00 3.16
3696 3937 2.363038 CCCACATGCCATCCTTACATTG 59.637 50.000 0.00 0.00 0.00 2.82
3697 3938 2.669781 CCCACATGCCATCCTTACATT 58.330 47.619 0.00 0.00 0.00 2.71
3698 3939 1.133388 CCCCACATGCCATCCTTACAT 60.133 52.381 0.00 0.00 0.00 2.29
3699 3940 0.258484 CCCCACATGCCATCCTTACA 59.742 55.000 0.00 0.00 0.00 2.41
3700 3941 1.109323 GCCCCACATGCCATCCTTAC 61.109 60.000 0.00 0.00 0.00 2.34
3701 3942 1.229927 GCCCCACATGCCATCCTTA 59.770 57.895 0.00 0.00 0.00 2.69
3702 3943 2.042639 GCCCCACATGCCATCCTT 60.043 61.111 0.00 0.00 0.00 3.36
3719 3960 1.003580 ACACTAACATGTGGCCTCAGG 59.996 52.381 17.32 17.32 41.84 3.86
3720 3961 2.289631 TGACACTAACATGTGGCCTCAG 60.290 50.000 13.77 7.98 44.92 3.35
3721 3962 1.696884 TGACACTAACATGTGGCCTCA 59.303 47.619 10.45 10.45 44.92 3.86
3722 3963 2.472695 TGACACTAACATGTGGCCTC 57.527 50.000 3.32 0.00 44.92 4.70
3723 3964 2.949177 TTGACACTAACATGTGGCCT 57.051 45.000 3.32 0.00 44.92 5.19
3724 3965 2.423538 GGATTGACACTAACATGTGGCC 59.576 50.000 0.00 0.00 44.92 5.36
3725 3966 3.127548 CAGGATTGACACTAACATGTGGC 59.872 47.826 0.00 0.00 45.68 5.01
3726 3967 3.691118 CCAGGATTGACACTAACATGTGG 59.309 47.826 0.00 0.00 41.84 4.17
3727 3968 4.393062 GTCCAGGATTGACACTAACATGTG 59.607 45.833 0.00 0.00 43.07 3.21
3728 3969 4.579869 GTCCAGGATTGACACTAACATGT 58.420 43.478 0.00 0.00 34.78 3.21
3729 3970 3.618594 CGTCCAGGATTGACACTAACATG 59.381 47.826 0.00 0.00 32.91 3.21
3730 3971 3.861840 CGTCCAGGATTGACACTAACAT 58.138 45.455 0.00 0.00 32.91 2.71
3731 3972 2.611971 GCGTCCAGGATTGACACTAACA 60.612 50.000 0.00 0.00 32.91 2.41
3732 3973 2.000447 GCGTCCAGGATTGACACTAAC 59.000 52.381 0.00 0.00 32.91 2.34
3733 3974 1.899814 AGCGTCCAGGATTGACACTAA 59.100 47.619 0.00 0.00 32.91 2.24
3734 3975 1.557099 AGCGTCCAGGATTGACACTA 58.443 50.000 0.00 0.00 32.91 2.74
3735 3976 1.557099 TAGCGTCCAGGATTGACACT 58.443 50.000 0.00 0.00 32.91 3.55
3736 3977 2.604046 ATAGCGTCCAGGATTGACAC 57.396 50.000 0.00 0.00 32.91 3.67
3737 3978 2.766263 AGAATAGCGTCCAGGATTGACA 59.234 45.455 0.00 0.00 32.91 3.58
3738 3979 3.068873 AGAGAATAGCGTCCAGGATTGAC 59.931 47.826 0.00 0.00 0.00 3.18
3739 3980 3.300388 AGAGAATAGCGTCCAGGATTGA 58.700 45.455 0.00 0.00 0.00 2.57
3740 3981 3.742433 AGAGAATAGCGTCCAGGATTG 57.258 47.619 0.00 0.00 0.00 2.67
3741 3982 3.742640 GCAAGAGAATAGCGTCCAGGATT 60.743 47.826 0.00 0.00 0.00 3.01
3742 3983 2.224161 GCAAGAGAATAGCGTCCAGGAT 60.224 50.000 0.00 0.00 0.00 3.24
3743 3984 1.137086 GCAAGAGAATAGCGTCCAGGA 59.863 52.381 0.00 0.00 0.00 3.86
3744 3985 1.576356 GCAAGAGAATAGCGTCCAGG 58.424 55.000 0.00 0.00 0.00 4.45
3745 3986 1.203928 CGCAAGAGAATAGCGTCCAG 58.796 55.000 0.00 0.00 45.82 3.86
3746 3987 3.345737 CGCAAGAGAATAGCGTCCA 57.654 52.632 0.00 0.00 45.82 4.02
3751 3992 2.723658 CTCGATCACGCAAGAGAATAGC 59.276 50.000 0.00 0.00 41.21 2.97
3752 3993 2.723658 GCTCGATCACGCAAGAGAATAG 59.276 50.000 0.00 0.00 41.21 1.73
3753 3994 2.099098 TGCTCGATCACGCAAGAGAATA 59.901 45.455 3.64 0.00 41.21 1.75
3754 3995 1.134995 TGCTCGATCACGCAAGAGAAT 60.135 47.619 3.64 0.00 41.21 2.40
3755 3996 0.243636 TGCTCGATCACGCAAGAGAA 59.756 50.000 3.64 0.00 41.21 2.87
3756 3997 0.243636 TTGCTCGATCACGCAAGAGA 59.756 50.000 12.97 0.00 40.84 3.10
3757 3998 2.741930 TTGCTCGATCACGCAAGAG 58.258 52.632 12.97 2.28 40.84 2.85
3758 3999 4.985845 TTGCTCGATCACGCAAGA 57.014 50.000 12.97 0.00 40.84 3.02
3771 4012 7.093333 AAGCTTACTTTAAAGGGCAATATTGCT 60.093 33.333 33.16 19.69 43.09 3.91
3772 4013 7.041721 AAGCTTACTTTAAAGGGCAATATTGC 58.958 34.615 28.68 28.68 42.91 3.56
3773 4014 8.470002 AGAAGCTTACTTTAAAGGGCAATATTG 58.530 33.333 19.14 11.27 35.82 1.90
3774 4015 8.470002 CAGAAGCTTACTTTAAAGGGCAATATT 58.530 33.333 19.14 9.93 35.82 1.28
3775 4016 7.068716 CCAGAAGCTTACTTTAAAGGGCAATAT 59.931 37.037 19.14 8.13 35.82 1.28
3776 4017 6.377146 CCAGAAGCTTACTTTAAAGGGCAATA 59.623 38.462 19.14 0.00 35.82 1.90
3777 4018 5.185828 CCAGAAGCTTACTTTAAAGGGCAAT 59.814 40.000 19.14 12.14 35.82 3.56
3778 4019 4.522789 CCAGAAGCTTACTTTAAAGGGCAA 59.477 41.667 19.14 9.05 35.82 4.52
3779 4020 4.079253 CCAGAAGCTTACTTTAAAGGGCA 58.921 43.478 19.14 1.58 35.82 5.36
3780 4021 4.079970 ACCAGAAGCTTACTTTAAAGGGC 58.920 43.478 19.14 17.75 35.82 5.19
3781 4022 5.646793 GGTACCAGAAGCTTACTTTAAAGGG 59.353 44.000 19.14 9.47 35.82 3.95
3782 4023 6.235664 TGGTACCAGAAGCTTACTTTAAAGG 58.764 40.000 19.14 3.11 35.82 3.11
3783 4024 6.371825 CCTGGTACCAGAAGCTTACTTTAAAG 59.628 42.308 38.35 15.03 46.30 1.85
3784 4025 6.043474 TCCTGGTACCAGAAGCTTACTTTAAA 59.957 38.462 38.35 4.43 46.30 1.52
3785 4026 5.544948 TCCTGGTACCAGAAGCTTACTTTAA 59.455 40.000 38.35 5.10 46.30 1.52
3786 4027 5.088730 TCCTGGTACCAGAAGCTTACTTTA 58.911 41.667 38.35 5.77 46.30 1.85
3787 4028 3.908103 TCCTGGTACCAGAAGCTTACTTT 59.092 43.478 38.35 0.00 46.30 2.66
3788 4029 3.517612 TCCTGGTACCAGAAGCTTACTT 58.482 45.455 38.35 0.00 46.30 2.24
3789 4030 3.185880 TCCTGGTACCAGAAGCTTACT 57.814 47.619 38.35 0.00 46.30 2.24
3790 4031 3.451178 TCATCCTGGTACCAGAAGCTTAC 59.549 47.826 38.35 0.00 46.30 2.34
3791 4032 3.719871 TCATCCTGGTACCAGAAGCTTA 58.280 45.455 38.35 17.95 46.30 3.09
3792 4033 2.551270 TCATCCTGGTACCAGAAGCTT 58.449 47.619 38.35 17.40 46.30 3.74
3793 4034 2.237392 GTTCATCCTGGTACCAGAAGCT 59.763 50.000 38.35 18.89 46.30 3.74
3794 4035 2.027192 TGTTCATCCTGGTACCAGAAGC 60.027 50.000 38.35 22.69 46.30 3.86
3795 4036 3.007940 TGTGTTCATCCTGGTACCAGAAG 59.992 47.826 38.35 26.61 46.30 2.85
3796 4037 2.976185 TGTGTTCATCCTGGTACCAGAA 59.024 45.455 38.35 24.24 46.30 3.02
3797 4038 2.615391 TGTGTTCATCCTGGTACCAGA 58.385 47.619 38.35 25.38 46.30 3.86
3798 4039 3.417069 TTGTGTTCATCCTGGTACCAG 57.583 47.619 31.71 31.71 43.26 4.00
3799 4040 3.866703 TTTGTGTTCATCCTGGTACCA 57.133 42.857 15.39 15.39 0.00 3.25
3800 4041 3.694566 GGATTTGTGTTCATCCTGGTACC 59.305 47.826 4.43 4.43 0.00 3.34
3801 4042 3.374058 CGGATTTGTGTTCATCCTGGTAC 59.626 47.826 0.00 0.00 0.00 3.34
3802 4043 3.605634 CGGATTTGTGTTCATCCTGGTA 58.394 45.455 0.00 0.00 0.00 3.25
3803 4044 2.436417 CGGATTTGTGTTCATCCTGGT 58.564 47.619 0.00 0.00 0.00 4.00
3804 4045 1.745087 CCGGATTTGTGTTCATCCTGG 59.255 52.381 0.00 0.00 0.00 4.45
3805 4046 2.436417 ACCGGATTTGTGTTCATCCTG 58.564 47.619 9.46 0.00 0.00 3.86
3806 4047 2.879103 ACCGGATTTGTGTTCATCCT 57.121 45.000 9.46 0.00 0.00 3.24
3807 4048 3.574614 CAAACCGGATTTGTGTTCATCC 58.425 45.455 9.46 0.00 42.46 3.51
3817 4058 4.081365 ACAAGGAAACAACAAACCGGATTT 60.081 37.500 9.46 1.72 0.00 2.17
3818 4059 3.449377 ACAAGGAAACAACAAACCGGATT 59.551 39.130 9.46 0.00 0.00 3.01
3819 4060 3.028130 ACAAGGAAACAACAAACCGGAT 58.972 40.909 9.46 0.00 0.00 4.18
3820 4061 2.424246 GACAAGGAAACAACAAACCGGA 59.576 45.455 9.46 0.00 0.00 5.14
3821 4062 2.164624 TGACAAGGAAACAACAAACCGG 59.835 45.455 0.00 0.00 0.00 5.28
3822 4063 3.175929 GTGACAAGGAAACAACAAACCG 58.824 45.455 0.00 0.00 0.00 4.44
3823 4064 3.175929 CGTGACAAGGAAACAACAAACC 58.824 45.455 0.00 0.00 0.00 3.27
3824 4065 3.828786 ACGTGACAAGGAAACAACAAAC 58.171 40.909 0.00 0.00 0.00 2.93
3825 4066 4.454847 TGTACGTGACAAGGAAACAACAAA 59.545 37.500 0.00 0.00 34.15 2.83
3826 4067 4.001652 TGTACGTGACAAGGAAACAACAA 58.998 39.130 0.00 0.00 34.15 2.83
3827 4068 3.371591 GTGTACGTGACAAGGAAACAACA 59.628 43.478 0.00 0.00 40.66 3.33
3828 4069 3.619929 AGTGTACGTGACAAGGAAACAAC 59.380 43.478 0.00 0.00 40.66 3.32
3829 4070 3.864243 AGTGTACGTGACAAGGAAACAA 58.136 40.909 0.00 0.00 40.66 2.83
3830 4071 3.530265 AGTGTACGTGACAAGGAAACA 57.470 42.857 0.00 0.00 40.66 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.