Multiple sequence alignment - TraesCS3A01G128700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G128700 chr3A 100.000 3095 0 0 1 3095 106399308 106396214 0.000000e+00 5716.0
1 TraesCS3A01G128700 chr3A 97.554 327 8 0 2708 3034 715579417 715579091 7.500000e-156 560.0
2 TraesCS3A01G128700 chr3A 95.322 171 8 0 1933 2103 106309127 106308957 3.930000e-69 272.0
3 TraesCS3A01G128700 chr3D 91.793 1986 95 32 771 2708 89639443 89637478 0.000000e+00 2702.0
4 TraesCS3A01G128700 chr3D 93.072 765 52 1 1361 2125 89628251 89627488 0.000000e+00 1118.0
5 TraesCS3A01G128700 chr3D 89.490 647 59 9 1326 1969 89547597 89546957 0.000000e+00 809.0
6 TraesCS3A01G128700 chr3D 89.325 459 25 16 2171 2622 89627390 89626949 3.490000e-154 555.0
7 TraesCS3A01G128700 chr3D 95.413 327 15 0 2708 3034 478423602 478423276 3.540000e-144 521.0
8 TraesCS3A01G128700 chr3D 93.151 146 10 0 1958 2103 89546410 89546265 6.720000e-52 215.0
9 TraesCS3A01G128700 chr3D 81.538 130 20 2 981 1110 89553822 89553697 1.520000e-18 104.0
10 TraesCS3A01G128700 chr3D 100.000 49 0 0 3047 3095 89626771 89626723 1.180000e-14 91.6
11 TraesCS3A01G128700 chr3D 95.918 49 2 0 3047 3095 89637420 89637372 2.560000e-11 80.5
12 TraesCS3A01G128700 chr3B 94.305 1598 74 9 743 2338 139196798 139195216 0.000000e+00 2431.0
13 TraesCS3A01G128700 chr3B 86.914 1131 129 9 987 2103 139038901 139037776 0.000000e+00 1251.0
14 TraesCS3A01G128700 chr3B 96.024 327 13 0 2708 3034 201993956 201993630 1.630000e-147 532.0
15 TraesCS3A01G128700 chr3B 87.893 413 28 12 2301 2708 139194976 139194581 1.680000e-127 466.0
16 TraesCS3A01G128700 chr3B 90.270 185 16 1 2438 2620 139195168 139194984 1.110000e-59 241.0
17 TraesCS3A01G128700 chr3B 84.884 86 13 0 1 86 139198806 139198721 1.530000e-13 87.9
18 TraesCS3A01G128700 chr3B 94.118 51 1 1 3047 3095 139194523 139194473 3.310000e-10 76.8
19 TraesCS3A01G128700 chr7B 96.914 324 10 0 2708 3031 729234031 729234354 7.550000e-151 544.0
20 TraesCS3A01G128700 chr7B 96.330 327 12 0 2708 3034 363223441 363223115 3.510000e-149 538.0
21 TraesCS3A01G128700 chr1A 96.330 327 12 0 2708 3034 539709908 539709582 3.510000e-149 538.0
22 TraesCS3A01G128700 chr7A 95.280 339 13 3 2708 3045 640371049 640371385 4.540000e-148 534.0
23 TraesCS3A01G128700 chr7A 80.702 114 22 0 1569 1682 722332798 722332685 4.250000e-14 89.8
24 TraesCS3A01G128700 chr6D 95.719 327 14 0 2708 3034 331538995 331538669 7.600000e-146 527.0
25 TraesCS3A01G128700 chr5D 95.988 324 13 0 2708 3031 120778527 120778850 7.600000e-146 527.0
26 TraesCS3A01G128700 chr4A 77.912 661 134 9 1419 2073 696600891 696600237 4.810000e-108 401.0
27 TraesCS3A01G128700 chr4A 77.116 638 134 10 1442 2073 697573822 697574453 2.930000e-95 359.0
28 TraesCS3A01G128700 chr4A 78.571 364 69 7 1379 1736 697503321 697503681 6.670000e-57 231.0
29 TraesCS3A01G128700 chr4A 75.217 230 47 8 1802 2026 2780342 2780118 1.960000e-17 100.0
30 TraesCS3A01G128700 chr1B 72.494 429 100 16 1562 1980 334124068 334124488 4.190000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G128700 chr3A 106396214 106399308 3094 True 5716.00 5716 100.000000 1 3095 1 chr3A.!!$R2 3094
1 TraesCS3A01G128700 chr3D 89637372 89639443 2071 True 1391.25 2702 93.855500 771 3095 2 chr3D.!!$R5 2324
2 TraesCS3A01G128700 chr3D 89626723 89628251 1528 True 588.20 1118 94.132333 1361 3095 3 chr3D.!!$R4 1734
3 TraesCS3A01G128700 chr3D 89546265 89547597 1332 True 512.00 809 91.320500 1326 2103 2 chr3D.!!$R3 777
4 TraesCS3A01G128700 chr3B 139037776 139038901 1125 True 1251.00 1251 86.914000 987 2103 1 chr3B.!!$R1 1116
5 TraesCS3A01G128700 chr3B 139194473 139198806 4333 True 660.54 2431 90.294000 1 3095 5 chr3B.!!$R3 3094
6 TraesCS3A01G128700 chr4A 696600237 696600891 654 True 401.00 401 77.912000 1419 2073 1 chr4A.!!$R2 654
7 TraesCS3A01G128700 chr4A 697573822 697574453 631 False 359.00 359 77.116000 1442 2073 1 chr4A.!!$F2 631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
39 40 0.039618 ATTTCGGGGCATGAGGTTGT 59.960 50.0 0.00 0.0 0.0 3.32 F
555 882 0.308993 GCGAACATATGCTCCTTGGC 59.691 55.0 1.58 0.0 0.0 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1297 2637 2.187946 CTTACGGCCCCAGCTCTG 59.812 66.667 0.0 0.0 39.73 3.35 R
2349 4618 1.527311 GCAGAACAGACGTTTCTCCAC 59.473 52.381 0.0 0.0 34.75 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.338327 AGAACACCTCGCGACAAC 57.662 55.556 3.71 0.00 0.00 3.32
25 26 0.293723 CCTCGCGACAACGTATTTCG 59.706 55.000 3.71 8.56 46.00 3.46
28 29 1.711500 GCGACAACGTATTTCGGGG 59.289 57.895 13.32 0.00 44.69 5.73
29 30 1.711500 CGACAACGTATTTCGGGGC 59.289 57.895 5.67 0.00 44.69 5.80
31 32 1.375551 GACAACGTATTTCGGGGCAT 58.624 50.000 0.00 0.00 44.69 4.40
32 33 1.063469 GACAACGTATTTCGGGGCATG 59.937 52.381 0.00 0.00 44.69 4.06
36 37 0.179056 CGTATTTCGGGGCATGAGGT 60.179 55.000 0.00 0.00 35.71 3.85
39 40 0.039618 ATTTCGGGGCATGAGGTTGT 59.960 50.000 0.00 0.00 0.00 3.32
45 46 1.648467 GGGCATGAGGTTGTCGAAGC 61.648 60.000 0.00 0.00 0.00 3.86
51 52 0.804989 GAGGTTGTCGAAGCCATTGG 59.195 55.000 0.00 0.00 0.00 3.16
82 83 2.860009 GGGAACCGAGGAAGAAACTTT 58.140 47.619 0.00 0.00 40.86 2.66
86 87 4.497507 GGAACCGAGGAAGAAACTTTGTTG 60.498 45.833 0.00 0.00 0.00 3.33
88 89 3.211045 CCGAGGAAGAAACTTTGTTGGA 58.789 45.455 0.00 0.00 0.00 3.53
89 90 3.821033 CCGAGGAAGAAACTTTGTTGGAT 59.179 43.478 0.00 0.00 0.00 3.41
90 91 4.320494 CCGAGGAAGAAACTTTGTTGGATG 60.320 45.833 0.00 0.00 0.00 3.51
91 92 4.320494 CGAGGAAGAAACTTTGTTGGATGG 60.320 45.833 0.00 0.00 0.00 3.51
92 93 4.803452 AGGAAGAAACTTTGTTGGATGGA 58.197 39.130 0.00 0.00 0.00 3.41
93 94 4.829492 AGGAAGAAACTTTGTTGGATGGAG 59.171 41.667 0.00 0.00 0.00 3.86
94 95 4.827284 GGAAGAAACTTTGTTGGATGGAGA 59.173 41.667 0.00 0.00 0.00 3.71
95 96 5.301805 GGAAGAAACTTTGTTGGATGGAGAA 59.698 40.000 0.00 0.00 0.00 2.87
96 97 6.396829 AAGAAACTTTGTTGGATGGAGAAG 57.603 37.500 0.00 0.00 0.00 2.85
97 98 4.279420 AGAAACTTTGTTGGATGGAGAAGC 59.721 41.667 0.00 0.00 0.00 3.86
98 99 3.228188 ACTTTGTTGGATGGAGAAGCA 57.772 42.857 0.00 0.00 0.00 3.91
99 100 3.771216 ACTTTGTTGGATGGAGAAGCAT 58.229 40.909 0.00 0.00 0.00 3.79
100 101 3.508793 ACTTTGTTGGATGGAGAAGCATG 59.491 43.478 0.00 0.00 0.00 4.06
101 102 2.885135 TGTTGGATGGAGAAGCATGT 57.115 45.000 0.00 0.00 0.00 3.21
102 103 3.159213 TGTTGGATGGAGAAGCATGTT 57.841 42.857 0.00 0.00 0.00 2.71
103 104 4.299586 TGTTGGATGGAGAAGCATGTTA 57.700 40.909 0.00 0.00 0.00 2.41
104 105 4.264253 TGTTGGATGGAGAAGCATGTTAG 58.736 43.478 0.00 0.00 0.00 2.34
105 106 3.565764 TGGATGGAGAAGCATGTTAGG 57.434 47.619 0.00 0.00 0.00 2.69
106 107 2.173356 TGGATGGAGAAGCATGTTAGGG 59.827 50.000 0.00 0.00 0.00 3.53
107 108 2.173569 GGATGGAGAAGCATGTTAGGGT 59.826 50.000 0.00 0.00 0.00 4.34
108 109 2.787473 TGGAGAAGCATGTTAGGGTG 57.213 50.000 0.00 0.00 0.00 4.61
109 110 1.985159 TGGAGAAGCATGTTAGGGTGT 59.015 47.619 0.00 0.00 0.00 4.16
110 111 2.375174 TGGAGAAGCATGTTAGGGTGTT 59.625 45.455 0.00 0.00 0.00 3.32
111 112 3.585289 TGGAGAAGCATGTTAGGGTGTTA 59.415 43.478 0.00 0.00 0.00 2.41
112 113 3.939592 GGAGAAGCATGTTAGGGTGTTAC 59.060 47.826 0.00 0.00 0.00 2.50
113 114 3.596214 AGAAGCATGTTAGGGTGTTACG 58.404 45.455 0.00 0.00 0.00 3.18
114 115 3.259876 AGAAGCATGTTAGGGTGTTACGA 59.740 43.478 0.00 0.00 0.00 3.43
115 116 3.906720 AGCATGTTAGGGTGTTACGAT 57.093 42.857 0.00 0.00 0.00 3.73
116 117 4.216411 AGCATGTTAGGGTGTTACGATT 57.784 40.909 0.00 0.00 0.00 3.34
117 118 4.585879 AGCATGTTAGGGTGTTACGATTT 58.414 39.130 0.00 0.00 0.00 2.17
118 119 4.394920 AGCATGTTAGGGTGTTACGATTTG 59.605 41.667 0.00 0.00 0.00 2.32
119 120 4.438200 GCATGTTAGGGTGTTACGATTTGG 60.438 45.833 0.00 0.00 0.00 3.28
120 121 3.677190 TGTTAGGGTGTTACGATTTGGG 58.323 45.455 0.00 0.00 0.00 4.12
121 122 3.072768 TGTTAGGGTGTTACGATTTGGGT 59.927 43.478 0.00 0.00 0.00 4.51
122 123 2.963599 AGGGTGTTACGATTTGGGTT 57.036 45.000 0.00 0.00 0.00 4.11
123 124 2.510613 AGGGTGTTACGATTTGGGTTG 58.489 47.619 0.00 0.00 0.00 3.77
124 125 1.542472 GGGTGTTACGATTTGGGTTGG 59.458 52.381 0.00 0.00 0.00 3.77
125 126 1.542472 GGTGTTACGATTTGGGTTGGG 59.458 52.381 0.00 0.00 0.00 4.12
126 127 1.542472 GTGTTACGATTTGGGTTGGGG 59.458 52.381 0.00 0.00 0.00 4.96
127 128 1.179152 GTTACGATTTGGGTTGGGGG 58.821 55.000 0.00 0.00 0.00 5.40
152 153 3.897122 GGAGGGTGGTGGTGGCAA 61.897 66.667 0.00 0.00 0.00 4.52
153 154 2.197324 GAGGGTGGTGGTGGCAAA 59.803 61.111 0.00 0.00 0.00 3.68
154 155 1.456705 GAGGGTGGTGGTGGCAAAA 60.457 57.895 0.00 0.00 0.00 2.44
155 156 1.457455 AGGGTGGTGGTGGCAAAAG 60.457 57.895 0.00 0.00 0.00 2.27
156 157 2.421314 GGTGGTGGTGGCAAAAGC 59.579 61.111 0.00 0.00 0.00 3.51
157 158 2.027460 GTGGTGGTGGCAAAAGCG 59.973 61.111 0.00 0.00 0.00 4.68
158 159 3.910490 TGGTGGTGGCAAAAGCGC 61.910 61.111 0.00 0.00 0.00 5.92
176 479 7.527084 AAAGCGCAAGTGTTTTGTTTAATAA 57.473 28.000 11.47 0.00 41.68 1.40
214 517 8.645487 GTGCTACAAATGTACTGTAGTTACTTC 58.355 37.037 17.36 5.36 45.36 3.01
223 526 7.600065 TGTACTGTAGTTACTTCACTCCATTC 58.400 38.462 0.00 0.00 0.00 2.67
234 537 4.280436 TCACTCCATTCACAAACGGTAT 57.720 40.909 0.00 0.00 0.00 2.73
236 539 3.062099 CACTCCATTCACAAACGGTATCG 59.938 47.826 0.00 0.00 43.02 2.92
239 542 3.930229 TCCATTCACAAACGGTATCGAAG 59.070 43.478 0.34 0.00 40.11 3.79
243 546 1.066716 CACAAACGGTATCGAAGGGGA 60.067 52.381 0.34 0.00 40.11 4.81
244 547 1.624813 ACAAACGGTATCGAAGGGGAA 59.375 47.619 0.34 0.00 40.11 3.97
247 550 2.391616 ACGGTATCGAAGGGGAAAAC 57.608 50.000 0.34 0.00 40.11 2.43
248 551 1.624813 ACGGTATCGAAGGGGAAAACA 59.375 47.619 0.34 0.00 40.11 2.83
251 556 3.692593 CGGTATCGAAGGGGAAAACATTT 59.307 43.478 0.00 0.00 39.00 2.32
254 559 4.535526 ATCGAAGGGGAAAACATTTTGG 57.464 40.909 0.00 0.00 0.00 3.28
259 564 1.696884 GGGGAAAACATTTTGGCTCCA 59.303 47.619 0.00 0.00 0.00 3.86
260 565 2.289631 GGGGAAAACATTTTGGCTCCAG 60.290 50.000 0.00 0.00 0.00 3.86
262 567 2.632512 GGAAAACATTTTGGCTCCAGGA 59.367 45.455 0.00 0.00 0.00 3.86
267 572 3.716431 ACATTTTGGCTCCAGGATGAAT 58.284 40.909 15.74 1.43 39.69 2.57
272 577 2.481441 TGGCTCCAGGATGAATAGTGT 58.519 47.619 0.00 0.00 39.69 3.55
275 580 4.141711 TGGCTCCAGGATGAATAGTGTAAC 60.142 45.833 0.00 0.00 39.69 2.50
315 641 5.922739 TCTACAACACACATGTTCATGTC 57.077 39.130 14.43 0.00 46.46 3.06
317 643 4.818534 ACAACACACATGTTCATGTCTC 57.181 40.909 14.43 0.00 46.46 3.36
326 652 5.007430 CACATGTTCATGTCTCTTATCTGCC 59.993 44.000 14.43 0.00 31.37 4.85
329 655 4.223700 TGTTCATGTCTCTTATCTGCCTGT 59.776 41.667 0.00 0.00 0.00 4.00
330 656 4.397481 TCATGTCTCTTATCTGCCTGTG 57.603 45.455 0.00 0.00 0.00 3.66
331 657 3.771479 TCATGTCTCTTATCTGCCTGTGT 59.229 43.478 0.00 0.00 0.00 3.72
352 678 7.403421 TGTGTAGTTTCGTGAACAAATAAGTG 58.597 34.615 7.07 0.00 40.84 3.16
360 686 7.956420 TCGTGAACAAATAAGTGTGTAATCT 57.044 32.000 0.00 0.00 0.00 2.40
361 687 9.478768 TTCGTGAACAAATAAGTGTGTAATCTA 57.521 29.630 0.00 0.00 0.00 1.98
370 696 9.515226 AAATAAGTGTGTAATCTAGGCAAAAGA 57.485 29.630 0.00 0.00 0.00 2.52
375 701 8.860088 AGTGTGTAATCTAGGCAAAAGAAAAAT 58.140 29.630 0.00 0.00 0.00 1.82
393 719 7.106890 AGAAAAATTGTACTCTAGAAGGGCTC 58.893 38.462 0.00 0.00 0.00 4.70
402 728 4.712829 ACTCTAGAAGGGCTCTTTTAGGAC 59.287 45.833 20.61 0.00 37.91 3.85
403 729 4.031611 TCTAGAAGGGCTCTTTTAGGACC 58.968 47.826 20.61 0.00 37.91 4.46
405 731 2.986728 AGAAGGGCTCTTTTAGGACCAA 59.013 45.455 0.00 0.00 32.52 3.67
408 734 4.779993 AGGGCTCTTTTAGGACCAATAG 57.220 45.455 0.00 0.00 0.00 1.73
409 735 4.371681 AGGGCTCTTTTAGGACCAATAGA 58.628 43.478 0.00 0.00 0.00 1.98
410 736 4.164413 AGGGCTCTTTTAGGACCAATAGAC 59.836 45.833 0.00 0.00 0.00 2.59
412 738 5.365895 GGGCTCTTTTAGGACCAATAGACTA 59.634 44.000 0.00 0.00 0.00 2.59
436 763 9.341899 CTATTTTTCTTAGTACAATTTGCGCTT 57.658 29.630 9.73 0.00 0.00 4.68
437 764 6.984740 TTTTCTTAGTACAATTTGCGCTTG 57.015 33.333 9.73 7.74 0.00 4.01
469 796 6.384258 TCATGAAAAATCAGACACGGAAAA 57.616 33.333 0.00 0.00 0.00 2.29
489 816 7.226523 CGGAAAAGGACATGAACATATACATGA 59.773 37.037 17.56 0.00 44.28 3.07
537 864 8.872845 CATTCATAATTTAACCTTTTCACCTGC 58.127 33.333 0.00 0.00 0.00 4.85
555 882 0.308993 GCGAACATATGCTCCTTGGC 59.691 55.000 1.58 0.00 0.00 4.52
572 899 1.202087 TGGCGCCGTTTTGAATATTCG 60.202 47.619 23.90 0.00 0.00 3.34
578 905 4.726704 CGCCGTTTTGAATATTCGTAAAGG 59.273 41.667 20.22 20.22 0.00 3.11
581 908 5.955496 CCGTTTTGAATATTCGTAAAGGTCG 59.045 40.000 21.37 16.97 0.00 4.79
588 915 9.550406 TTGAATATTCGTAAAGGTCGGATTTAT 57.450 29.630 10.80 0.00 0.00 1.40
589 916 9.550406 TGAATATTCGTAAAGGTCGGATTTATT 57.450 29.630 10.80 0.00 0.00 1.40
594 921 7.910441 TCGTAAAGGTCGGATTTATTTTTCT 57.090 32.000 0.00 0.00 0.00 2.52
595 922 8.326680 TCGTAAAGGTCGGATTTATTTTTCTT 57.673 30.769 0.00 0.00 0.00 2.52
596 923 9.434420 TCGTAAAGGTCGGATTTATTTTTCTTA 57.566 29.630 0.00 0.00 0.00 2.10
597 924 9.698617 CGTAAAGGTCGGATTTATTTTTCTTAG 57.301 33.333 0.00 0.00 0.00 2.18
600 927 9.908152 AAAGGTCGGATTTATTTTTCTTAGTTG 57.092 29.630 0.00 0.00 0.00 3.16
601 928 8.857694 AGGTCGGATTTATTTTTCTTAGTTGA 57.142 30.769 0.00 0.00 0.00 3.18
602 929 8.727910 AGGTCGGATTTATTTTTCTTAGTTGAC 58.272 33.333 0.00 0.00 0.00 3.18
630 957 5.647589 TCTTAGCACGGTTCACAATACTAG 58.352 41.667 0.00 0.00 0.00 2.57
659 986 4.747540 TCCATCAAAATTCACAGACACG 57.252 40.909 0.00 0.00 0.00 4.49
668 995 8.655970 TCAAAATTCACAGACACGAACATATAG 58.344 33.333 0.00 0.00 0.00 1.31
669 996 8.655970 CAAAATTCACAGACACGAACATATAGA 58.344 33.333 0.00 0.00 0.00 1.98
695 1022 9.820725 ATTTCAATTTCTGTTGACATTGAGAAA 57.179 25.926 0.00 0.00 44.84 2.52
733 1061 2.579873 CAGGAACATATGCTCCTTGGG 58.420 52.381 22.56 10.10 38.50 4.12
734 1062 1.496429 AGGAACATATGCTCCTTGGGG 59.504 52.381 19.99 0.00 37.34 4.96
753 2057 3.892588 GGGGCCATTTTGAATATCCGTAA 59.107 43.478 4.39 0.00 0.00 3.18
759 2063 6.039382 GCCATTTTGAATATCCGTAAAGGTCT 59.961 38.462 0.00 0.00 41.99 3.85
814 2118 2.285977 CGTAAGGCCCATTGAGTAACC 58.714 52.381 0.00 0.00 0.00 2.85
815 2119 2.093128 CGTAAGGCCCATTGAGTAACCT 60.093 50.000 0.00 0.00 0.00 3.50
817 2121 3.542969 AAGGCCCATTGAGTAACCTTT 57.457 42.857 0.00 0.00 33.82 3.11
818 2122 3.542969 AGGCCCATTGAGTAACCTTTT 57.457 42.857 0.00 0.00 0.00 2.27
819 2123 3.856900 AGGCCCATTGAGTAACCTTTTT 58.143 40.909 0.00 0.00 0.00 1.94
820 2124 5.005628 AGGCCCATTGAGTAACCTTTTTA 57.994 39.130 0.00 0.00 0.00 1.52
821 2125 5.589831 AGGCCCATTGAGTAACCTTTTTAT 58.410 37.500 0.00 0.00 0.00 1.40
823 2127 5.420739 GGCCCATTGAGTAACCTTTTTATCA 59.579 40.000 0.00 0.00 0.00 2.15
824 2128 6.330278 GCCCATTGAGTAACCTTTTTATCAC 58.670 40.000 0.00 0.00 0.00 3.06
825 2129 6.152831 GCCCATTGAGTAACCTTTTTATCACT 59.847 38.462 0.00 0.00 0.00 3.41
837 2141 7.386059 ACCTTTTTATCACTAAAGCCCATTTG 58.614 34.615 0.00 0.00 31.54 2.32
886 2191 2.065899 AGAAGAGTCCCGATCCAGAG 57.934 55.000 0.00 0.00 0.00 3.35
963 2294 1.228063 CATCCCTGCCGAATCCCAG 60.228 63.158 0.00 0.00 0.00 4.45
973 2304 0.596083 CGAATCCCAGTAGCTCTGCG 60.596 60.000 0.00 0.00 42.38 5.18
1026 2357 3.587933 AGCGCCTCCGAGATCGTC 61.588 66.667 2.29 0.00 37.74 4.20
1269 2609 0.322187 TCCAGTTCCGCTTTAAGGCC 60.322 55.000 3.72 0.00 0.00 5.19
1297 2637 1.807573 CACGCGCTCTCCTTTCTCC 60.808 63.158 5.73 0.00 0.00 3.71
1681 3024 2.081425 CTTCGGCTCGATGAGGGAGG 62.081 65.000 5.04 0.00 35.23 4.30
2044 3948 1.961180 GCGCTCAAGCTTCCCCTCTA 61.961 60.000 0.00 0.00 39.32 2.43
2083 3987 1.227380 AAGTGCTCGATCGATGCCC 60.227 57.895 25.96 19.27 0.00 5.36
2093 3997 0.760567 ATCGATGCCCCAGCTCAGTA 60.761 55.000 0.00 0.00 40.80 2.74
2130 4112 7.175347 TGATTGATCCTAGGATGCTACATAC 57.825 40.000 29.32 12.02 34.60 2.39
2204 4187 4.398988 CAGCAATGGTACTCTGGCATTTAA 59.601 41.667 0.00 0.00 0.00 1.52
2229 4212 5.499139 TTCTTGTCATGTTCAAAGTGACC 57.501 39.130 0.00 0.00 41.09 4.02
2340 4609 5.479375 AGTTGAATCTCCATTTGTTCTGCAT 59.521 36.000 0.00 0.00 0.00 3.96
2341 4610 5.988310 TGAATCTCCATTTGTTCTGCATT 57.012 34.783 0.00 0.00 0.00 3.56
2345 4614 7.171848 TGAATCTCCATTTGTTCTGCATTTTTG 59.828 33.333 0.00 0.00 0.00 2.44
2347 4616 5.754406 TCTCCATTTGTTCTGCATTTTTGTG 59.246 36.000 0.00 0.00 0.00 3.33
2349 4618 5.293814 TCCATTTGTTCTGCATTTTTGTGTG 59.706 36.000 0.00 0.00 0.00 3.82
2388 4657 4.759693 TCTGCAAATTATATGGCTAACCCG 59.240 41.667 0.00 0.00 35.87 5.28
2410 4679 6.164176 CCGTTGTGTTCTCCTCTAATAAAGT 58.836 40.000 0.00 0.00 0.00 2.66
2411 4680 7.318141 CCGTTGTGTTCTCCTCTAATAAAGTA 58.682 38.462 0.00 0.00 0.00 2.24
2412 4681 7.816031 CCGTTGTGTTCTCCTCTAATAAAGTAA 59.184 37.037 0.00 0.00 0.00 2.24
2413 4682 9.199982 CGTTGTGTTCTCCTCTAATAAAGTAAA 57.800 33.333 0.00 0.00 0.00 2.01
2432 4701 9.498176 AAAGTAAAAGTGTTTCGGATATACAGT 57.502 29.630 0.00 0.00 0.00 3.55
2434 4703 9.578439 AGTAAAAGTGTTTCGGATATACAGTAC 57.422 33.333 0.00 0.00 0.00 2.73
2435 4704 7.515957 AAAAGTGTTTCGGATATACAGTACG 57.484 36.000 0.00 0.00 0.00 3.67
2436 4705 5.824904 AGTGTTTCGGATATACAGTACGT 57.175 39.130 0.00 0.00 0.00 3.57
2481 4751 8.851541 TTAATGGTTTTACTAATCCAAGTCGT 57.148 30.769 0.00 0.00 36.85 4.34
2525 4799 5.875359 GTCGATTTCTGAATAGGGTGACTTT 59.125 40.000 0.00 0.00 0.00 2.66
2555 4829 7.718525 TGCTGATGCACATATAACATTTTCAT 58.281 30.769 0.00 0.00 45.31 2.57
2607 4881 4.037684 ACTTGGGAGATCTTATTACCGTCG 59.962 45.833 0.00 0.00 0.00 5.12
2649 4957 4.910195 TGTATGATCTCCAGTTTGCACTT 58.090 39.130 0.00 0.00 0.00 3.16
2653 4961 5.885230 TGATCTCCAGTTTGCACTTATTG 57.115 39.130 0.00 0.00 0.00 1.90
2708 5017 1.305219 CCATTGTCCGTCGGTGCAAT 61.305 55.000 21.95 21.95 32.99 3.56
2709 5018 0.521291 CATTGTCCGTCGGTGCAATT 59.479 50.000 23.78 13.07 31.51 2.32
2710 5019 1.068610 CATTGTCCGTCGGTGCAATTT 60.069 47.619 23.78 10.80 31.51 1.82
2711 5020 1.025812 TTGTCCGTCGGTGCAATTTT 58.974 45.000 11.88 0.00 0.00 1.82
2712 5021 1.025812 TGTCCGTCGGTGCAATTTTT 58.974 45.000 11.88 0.00 0.00 1.94
2713 5022 1.268794 TGTCCGTCGGTGCAATTTTTG 60.269 47.619 11.88 0.00 0.00 2.44
2715 5024 0.665972 CCGTCGGTGCAATTTTTGGG 60.666 55.000 2.08 0.00 0.00 4.12
2716 5025 1.281566 CGTCGGTGCAATTTTTGGGC 61.282 55.000 0.00 0.00 0.00 5.36
2719 5028 0.950071 CGGTGCAATTTTTGGGCTGG 60.950 55.000 0.00 0.00 0.00 4.85
2720 5029 0.108396 GGTGCAATTTTTGGGCTGGT 59.892 50.000 0.00 0.00 0.00 4.00
2721 5030 1.511850 GTGCAATTTTTGGGCTGGTC 58.488 50.000 0.00 0.00 0.00 4.02
2722 5031 1.070601 GTGCAATTTTTGGGCTGGTCT 59.929 47.619 0.00 0.00 0.00 3.85
2723 5032 1.070445 TGCAATTTTTGGGCTGGTCTG 59.930 47.619 0.00 0.00 0.00 3.51
2724 5033 1.344114 GCAATTTTTGGGCTGGTCTGA 59.656 47.619 0.00 0.00 0.00 3.27
2725 5034 2.027837 GCAATTTTTGGGCTGGTCTGAT 60.028 45.455 0.00 0.00 0.00 2.90
2726 5035 3.592059 CAATTTTTGGGCTGGTCTGATG 58.408 45.455 0.00 0.00 0.00 3.07
2727 5036 1.631405 TTTTTGGGCTGGTCTGATGG 58.369 50.000 0.00 0.00 0.00 3.51
2728 5037 0.899717 TTTTGGGCTGGTCTGATGGC 60.900 55.000 0.00 0.00 0.00 4.40
2729 5038 2.079088 TTTGGGCTGGTCTGATGGCA 62.079 55.000 0.00 0.00 0.00 4.92
2730 5039 2.124403 GGGCTGGTCTGATGGCAG 60.124 66.667 0.00 0.00 43.67 4.85
2731 5040 2.673523 GGCTGGTCTGATGGCAGT 59.326 61.111 0.00 0.00 42.84 4.40
2732 5041 1.626356 GGGCTGGTCTGATGGCAGTA 61.626 60.000 0.00 0.00 42.84 2.74
2733 5042 0.253044 GGCTGGTCTGATGGCAGTAA 59.747 55.000 0.00 0.00 42.84 2.24
2734 5043 1.340017 GGCTGGTCTGATGGCAGTAAA 60.340 52.381 0.00 0.00 42.84 2.01
2735 5044 2.012673 GCTGGTCTGATGGCAGTAAAG 58.987 52.381 0.00 0.00 42.84 1.85
2736 5045 2.355108 GCTGGTCTGATGGCAGTAAAGA 60.355 50.000 0.00 0.00 42.84 2.52
2737 5046 3.869912 GCTGGTCTGATGGCAGTAAAGAA 60.870 47.826 0.00 0.00 42.84 2.52
2738 5047 4.326826 CTGGTCTGATGGCAGTAAAGAAA 58.673 43.478 0.00 0.00 42.84 2.52
2739 5048 4.072131 TGGTCTGATGGCAGTAAAGAAAC 58.928 43.478 0.00 0.00 42.84 2.78
2740 5049 4.072131 GGTCTGATGGCAGTAAAGAAACA 58.928 43.478 0.00 0.00 42.84 2.83
2741 5050 4.702131 GGTCTGATGGCAGTAAAGAAACAT 59.298 41.667 0.00 0.00 42.84 2.71
2742 5051 5.163713 GGTCTGATGGCAGTAAAGAAACATC 60.164 44.000 0.00 0.00 42.84 3.06
2743 5052 5.645497 GTCTGATGGCAGTAAAGAAACATCT 59.355 40.000 0.00 0.00 42.84 2.90
2744 5053 6.150140 GTCTGATGGCAGTAAAGAAACATCTT 59.850 38.462 0.00 0.00 42.84 2.40
2745 5054 6.716628 TCTGATGGCAGTAAAGAAACATCTTT 59.283 34.615 8.67 8.67 42.84 2.52
2746 5055 7.231317 TCTGATGGCAGTAAAGAAACATCTTTT 59.769 33.333 8.91 0.00 42.84 2.27
2747 5056 7.370383 TGATGGCAGTAAAGAAACATCTTTTC 58.630 34.615 8.91 4.80 40.13 2.29
2748 5057 6.084326 TGGCAGTAAAGAAACATCTTTTCC 57.916 37.500 8.91 6.81 40.13 3.13
2749 5058 5.154222 GGCAGTAAAGAAACATCTTTTCCG 58.846 41.667 8.91 0.00 40.13 4.30
2750 5059 5.278315 GGCAGTAAAGAAACATCTTTTCCGT 60.278 40.000 8.91 0.00 40.13 4.69
2751 5060 6.206498 GCAGTAAAGAAACATCTTTTCCGTT 58.794 36.000 8.91 0.00 40.13 4.44
2752 5061 6.695713 GCAGTAAAGAAACATCTTTTCCGTTT 59.304 34.615 8.91 0.00 40.13 3.60
2753 5062 7.096599 GCAGTAAAGAAACATCTTTTCCGTTTC 60.097 37.037 8.91 6.20 45.64 2.78
2766 5075 3.635433 CGTTTCGGATCCTTAGCGA 57.365 52.632 10.75 0.00 0.00 4.93
2767 5076 2.135664 CGTTTCGGATCCTTAGCGAT 57.864 50.000 10.75 0.00 0.00 4.58
2768 5077 3.278367 CGTTTCGGATCCTTAGCGATA 57.722 47.619 10.75 0.00 0.00 2.92
2769 5078 3.635331 CGTTTCGGATCCTTAGCGATAA 58.365 45.455 10.75 0.00 0.00 1.75
2770 5079 4.046462 CGTTTCGGATCCTTAGCGATAAA 58.954 43.478 10.75 0.00 0.00 1.40
2771 5080 4.148348 CGTTTCGGATCCTTAGCGATAAAG 59.852 45.833 10.75 0.00 0.00 1.85
2772 5081 3.936372 TCGGATCCTTAGCGATAAAGG 57.064 47.619 10.75 0.00 44.17 3.11
2777 5086 1.068127 TCCTTAGCGATAAAGGACGGC 59.932 52.381 8.89 0.00 45.97 5.68
2778 5087 1.068741 CCTTAGCGATAAAGGACGGCT 59.931 52.381 5.23 0.00 45.41 5.52
2779 5088 2.395654 CTTAGCGATAAAGGACGGCTC 58.604 52.381 0.00 0.00 0.00 4.70
2780 5089 0.309922 TAGCGATAAAGGACGGCTCG 59.690 55.000 0.00 0.00 0.00 5.03
2781 5090 1.949631 GCGATAAAGGACGGCTCGG 60.950 63.158 0.00 0.00 0.00 4.63
2782 5091 1.731700 CGATAAAGGACGGCTCGGA 59.268 57.895 0.00 0.00 0.00 4.55
2783 5092 0.317938 CGATAAAGGACGGCTCGGAG 60.318 60.000 0.00 0.00 0.00 4.63
2784 5093 1.030457 GATAAAGGACGGCTCGGAGA 58.970 55.000 9.69 0.00 0.00 3.71
2785 5094 1.614413 GATAAAGGACGGCTCGGAGAT 59.386 52.381 9.69 0.00 33.89 2.75
2786 5095 2.353357 TAAAGGACGGCTCGGAGATA 57.647 50.000 9.69 0.00 33.89 1.98
2787 5096 0.745468 AAAGGACGGCTCGGAGATAC 59.255 55.000 9.69 0.00 33.89 2.24
2788 5097 1.445716 AAGGACGGCTCGGAGATACG 61.446 60.000 9.69 11.85 40.47 3.06
2789 5098 2.051166 GACGGCTCGGAGATACGC 60.051 66.667 9.69 3.20 38.73 4.42
2790 5099 2.516460 ACGGCTCGGAGATACGCT 60.516 61.111 9.69 0.00 38.73 5.07
2791 5100 2.061182 GACGGCTCGGAGATACGCTT 62.061 60.000 9.69 0.00 38.73 4.68
2792 5101 1.370657 CGGCTCGGAGATACGCTTC 60.371 63.158 9.69 0.00 33.89 3.86
2793 5102 1.787057 CGGCTCGGAGATACGCTTCT 61.787 60.000 9.69 0.00 33.89 2.85
2794 5103 0.318275 GGCTCGGAGATACGCTTCTG 60.318 60.000 9.69 0.00 33.89 3.02
2795 5104 0.318275 GCTCGGAGATACGCTTCTGG 60.318 60.000 9.69 0.00 33.89 3.86
2796 5105 0.312416 CTCGGAGATACGCTTCTGGG 59.688 60.000 0.00 0.00 33.89 4.45
2797 5106 0.106868 TCGGAGATACGCTTCTGGGA 60.107 55.000 0.00 0.00 0.00 4.37
2798 5107 0.312416 CGGAGATACGCTTCTGGGAG 59.688 60.000 0.00 0.00 0.00 4.30
2799 5108 1.693627 GGAGATACGCTTCTGGGAGA 58.306 55.000 0.00 0.00 0.00 3.71
2800 5109 2.032620 GGAGATACGCTTCTGGGAGAA 58.967 52.381 0.00 0.00 32.50 2.87
2801 5110 2.223852 GGAGATACGCTTCTGGGAGAAC 60.224 54.545 0.00 0.00 29.89 3.01
2802 5111 2.427453 GAGATACGCTTCTGGGAGAACA 59.573 50.000 0.00 0.00 29.89 3.18
2803 5112 2.832129 AGATACGCTTCTGGGAGAACAA 59.168 45.455 0.00 0.00 29.89 2.83
2804 5113 2.743636 TACGCTTCTGGGAGAACAAG 57.256 50.000 0.00 0.00 29.89 3.16
2805 5114 0.759346 ACGCTTCTGGGAGAACAAGT 59.241 50.000 0.00 0.00 29.89 3.16
2806 5115 1.151668 CGCTTCTGGGAGAACAAGTG 58.848 55.000 0.00 0.00 29.89 3.16
2807 5116 1.528129 GCTTCTGGGAGAACAAGTGG 58.472 55.000 0.00 0.00 29.89 4.00
2808 5117 1.528129 CTTCTGGGAGAACAAGTGGC 58.472 55.000 0.00 0.00 29.89 5.01
2809 5118 1.072965 CTTCTGGGAGAACAAGTGGCT 59.927 52.381 0.00 0.00 29.89 4.75
2810 5119 2.024176 TCTGGGAGAACAAGTGGCTA 57.976 50.000 0.00 0.00 0.00 3.93
2811 5120 1.902508 TCTGGGAGAACAAGTGGCTAG 59.097 52.381 0.00 0.00 0.00 3.42
2812 5121 0.984230 TGGGAGAACAAGTGGCTAGG 59.016 55.000 0.00 0.00 0.00 3.02
2813 5122 1.276622 GGGAGAACAAGTGGCTAGGA 58.723 55.000 0.00 0.00 0.00 2.94
2814 5123 1.628846 GGGAGAACAAGTGGCTAGGAA 59.371 52.381 0.00 0.00 0.00 3.36
2815 5124 2.039879 GGGAGAACAAGTGGCTAGGAAA 59.960 50.000 0.00 0.00 0.00 3.13
2816 5125 3.308473 GGGAGAACAAGTGGCTAGGAAAT 60.308 47.826 0.00 0.00 0.00 2.17
2817 5126 4.080526 GGGAGAACAAGTGGCTAGGAAATA 60.081 45.833 0.00 0.00 0.00 1.40
2818 5127 4.876679 GGAGAACAAGTGGCTAGGAAATAC 59.123 45.833 0.00 0.00 0.00 1.89
2819 5128 4.844884 AGAACAAGTGGCTAGGAAATACC 58.155 43.478 0.00 0.00 39.35 2.73
2820 5129 4.288626 AGAACAAGTGGCTAGGAAATACCA 59.711 41.667 0.00 0.00 42.04 3.25
2826 5135 3.039011 TGGCTAGGAAATACCACTCTCC 58.961 50.000 0.00 0.00 42.04 3.71
2827 5136 2.036089 GGCTAGGAAATACCACTCTCCG 59.964 54.545 0.00 0.00 42.04 4.63
2828 5137 2.957006 GCTAGGAAATACCACTCTCCGA 59.043 50.000 0.00 0.00 42.04 4.55
2829 5138 3.004944 GCTAGGAAATACCACTCTCCGAG 59.995 52.174 0.00 0.00 42.04 4.63
2830 5139 3.383698 AGGAAATACCACTCTCCGAGA 57.616 47.619 0.00 0.00 42.04 4.04
2831 5140 3.709587 AGGAAATACCACTCTCCGAGAA 58.290 45.455 0.00 0.00 42.04 2.87
2832 5141 3.447944 AGGAAATACCACTCTCCGAGAAC 59.552 47.826 0.00 0.00 42.04 3.01
2833 5142 3.194968 GGAAATACCACTCTCCGAGAACA 59.805 47.826 0.00 0.00 38.79 3.18
2834 5143 4.425520 GAAATACCACTCTCCGAGAACAG 58.574 47.826 0.00 0.00 33.32 3.16
2835 5144 2.581216 TACCACTCTCCGAGAACAGT 57.419 50.000 0.00 0.00 33.32 3.55
2836 5145 2.581216 ACCACTCTCCGAGAACAGTA 57.419 50.000 0.00 0.00 33.32 2.74
2837 5146 2.161030 ACCACTCTCCGAGAACAGTAC 58.839 52.381 0.00 0.00 33.32 2.73
2838 5147 1.473278 CCACTCTCCGAGAACAGTACC 59.527 57.143 0.00 0.00 33.32 3.34
2839 5148 1.473278 CACTCTCCGAGAACAGTACCC 59.527 57.143 0.00 0.00 33.32 3.69
2840 5149 1.075050 ACTCTCCGAGAACAGTACCCA 59.925 52.381 0.00 0.00 33.32 4.51
2841 5150 1.746220 CTCTCCGAGAACAGTACCCAG 59.254 57.143 0.00 0.00 0.00 4.45
2842 5151 0.173708 CTCCGAGAACAGTACCCAGC 59.826 60.000 0.00 0.00 0.00 4.85
2843 5152 1.218316 CCGAGAACAGTACCCAGCC 59.782 63.158 0.00 0.00 0.00 4.85
2844 5153 1.258445 CCGAGAACAGTACCCAGCCT 61.258 60.000 0.00 0.00 0.00 4.58
2845 5154 0.608640 CGAGAACAGTACCCAGCCTT 59.391 55.000 0.00 0.00 0.00 4.35
2846 5155 1.673033 CGAGAACAGTACCCAGCCTTG 60.673 57.143 0.00 0.00 0.00 3.61
2847 5156 1.348036 GAGAACAGTACCCAGCCTTGT 59.652 52.381 0.00 0.00 0.00 3.16
2848 5157 2.565834 GAGAACAGTACCCAGCCTTGTA 59.434 50.000 0.00 0.00 0.00 2.41
2849 5158 2.302157 AGAACAGTACCCAGCCTTGTAC 59.698 50.000 0.00 0.00 38.06 2.90
2850 5159 0.981943 ACAGTACCCAGCCTTGTACC 59.018 55.000 4.24 0.00 38.45 3.34
2851 5160 0.108329 CAGTACCCAGCCTTGTACCG 60.108 60.000 4.24 0.00 38.45 4.02
2852 5161 1.449070 GTACCCAGCCTTGTACCGC 60.449 63.158 0.00 0.00 32.94 5.68
2853 5162 1.914263 TACCCAGCCTTGTACCGCA 60.914 57.895 0.00 0.00 0.00 5.69
2854 5163 1.268992 TACCCAGCCTTGTACCGCAT 61.269 55.000 0.00 0.00 0.00 4.73
2855 5164 1.378514 CCCAGCCTTGTACCGCATT 60.379 57.895 0.00 0.00 0.00 3.56
2856 5165 1.656818 CCCAGCCTTGTACCGCATTG 61.657 60.000 0.00 0.00 0.00 2.82
2857 5166 0.960364 CCAGCCTTGTACCGCATTGT 60.960 55.000 0.00 0.00 0.00 2.71
2858 5167 1.677518 CCAGCCTTGTACCGCATTGTA 60.678 52.381 0.00 0.00 0.00 2.41
2859 5168 2.288666 CAGCCTTGTACCGCATTGTAT 58.711 47.619 0.00 0.00 0.00 2.29
2860 5169 2.032054 CAGCCTTGTACCGCATTGTATG 59.968 50.000 0.00 0.00 0.00 2.39
2876 5185 7.568267 CATTGTATGCGATAAGAACGATACT 57.432 36.000 0.00 0.00 31.79 2.12
2877 5186 7.658261 CATTGTATGCGATAAGAACGATACTC 58.342 38.462 0.00 0.00 31.79 2.59
2878 5187 6.555812 TGTATGCGATAAGAACGATACTCT 57.444 37.500 0.00 0.00 31.79 3.24
2879 5188 6.967135 TGTATGCGATAAGAACGATACTCTT 58.033 36.000 0.00 0.00 37.00 2.85
2880 5189 6.856426 TGTATGCGATAAGAACGATACTCTTG 59.144 38.462 0.00 0.00 34.90 3.02
2881 5190 4.042398 TGCGATAAGAACGATACTCTTGC 58.958 43.478 0.00 0.00 34.90 4.01
2882 5191 3.118157 GCGATAAGAACGATACTCTTGCG 59.882 47.826 0.00 2.45 36.22 4.85
2883 5192 3.118157 CGATAAGAACGATACTCTTGCGC 59.882 47.826 0.00 0.00 34.90 6.09
2884 5193 2.363788 AAGAACGATACTCTTGCGCA 57.636 45.000 5.66 5.66 31.86 6.09
2885 5194 2.586258 AGAACGATACTCTTGCGCAT 57.414 45.000 12.75 0.00 0.00 4.73
2886 5195 2.196749 AGAACGATACTCTTGCGCATG 58.803 47.619 12.75 15.07 0.00 4.06
2887 5196 1.927174 GAACGATACTCTTGCGCATGT 59.073 47.619 21.14 17.29 0.00 3.21
2888 5197 1.280982 ACGATACTCTTGCGCATGTG 58.719 50.000 21.14 20.49 0.00 3.21
2889 5198 1.135112 ACGATACTCTTGCGCATGTGA 60.135 47.619 26.03 17.10 0.00 3.58
2890 5199 2.130395 CGATACTCTTGCGCATGTGAT 58.870 47.619 26.03 16.17 0.00 3.06
2891 5200 2.097056 CGATACTCTTGCGCATGTGATG 60.097 50.000 26.03 15.65 0.00 3.07
2892 5201 2.671130 TACTCTTGCGCATGTGATGA 57.329 45.000 26.03 11.40 0.00 2.92
2893 5202 1.081892 ACTCTTGCGCATGTGATGAC 58.918 50.000 26.03 0.00 0.00 3.06
2894 5203 0.376152 CTCTTGCGCATGTGATGACC 59.624 55.000 21.14 0.00 0.00 4.02
2895 5204 0.321475 TCTTGCGCATGTGATGACCA 60.321 50.000 21.14 0.00 0.00 4.02
2896 5205 0.179181 CTTGCGCATGTGATGACCAC 60.179 55.000 12.75 0.00 45.88 4.16
2897 5206 0.606130 TTGCGCATGTGATGACCACT 60.606 50.000 12.75 0.00 45.86 4.00
2898 5207 0.606130 TGCGCATGTGATGACCACTT 60.606 50.000 5.66 0.00 45.86 3.16
2899 5208 0.097674 GCGCATGTGATGACCACTTC 59.902 55.000 11.26 0.00 45.86 3.01
2900 5209 1.730501 CGCATGTGATGACCACTTCT 58.269 50.000 0.00 0.00 45.86 2.85
2901 5210 1.662629 CGCATGTGATGACCACTTCTC 59.337 52.381 0.00 0.00 45.86 2.87
2902 5211 2.012673 GCATGTGATGACCACTTCTCC 58.987 52.381 0.00 0.00 45.86 3.71
2903 5212 2.274437 CATGTGATGACCACTTCTCCG 58.726 52.381 0.00 0.00 45.86 4.63
2904 5213 0.037326 TGTGATGACCACTTCTCCGC 60.037 55.000 0.00 0.00 45.86 5.54
2905 5214 0.741221 GTGATGACCACTTCTCCGCC 60.741 60.000 0.00 0.00 42.44 6.13
2906 5215 1.191489 TGATGACCACTTCTCCGCCA 61.191 55.000 0.00 0.00 0.00 5.69
2907 5216 0.460987 GATGACCACTTCTCCGCCAG 60.461 60.000 0.00 0.00 0.00 4.85
2908 5217 0.904865 ATGACCACTTCTCCGCCAGA 60.905 55.000 0.00 0.00 0.00 3.86
2909 5218 0.904865 TGACCACTTCTCCGCCAGAT 60.905 55.000 0.00 0.00 0.00 2.90
2910 5219 1.112113 GACCACTTCTCCGCCAGATA 58.888 55.000 0.00 0.00 0.00 1.98
2911 5220 1.689273 GACCACTTCTCCGCCAGATAT 59.311 52.381 0.00 0.00 0.00 1.63
2912 5221 2.891580 GACCACTTCTCCGCCAGATATA 59.108 50.000 0.00 0.00 0.00 0.86
2913 5222 3.511477 ACCACTTCTCCGCCAGATATAT 58.489 45.455 0.00 0.00 0.00 0.86
2914 5223 3.511934 ACCACTTCTCCGCCAGATATATC 59.488 47.826 4.42 4.42 0.00 1.63
2915 5224 3.511540 CCACTTCTCCGCCAGATATATCA 59.488 47.826 15.08 0.00 0.00 2.15
2916 5225 4.161189 CCACTTCTCCGCCAGATATATCAT 59.839 45.833 15.08 0.00 0.00 2.45
2917 5226 5.337894 CCACTTCTCCGCCAGATATATCATT 60.338 44.000 15.08 0.00 0.00 2.57
2918 5227 6.169094 CACTTCTCCGCCAGATATATCATTT 58.831 40.000 15.08 0.00 0.00 2.32
2919 5228 6.312426 CACTTCTCCGCCAGATATATCATTTC 59.688 42.308 15.08 0.79 0.00 2.17
2920 5229 4.998788 TCTCCGCCAGATATATCATTTCG 58.001 43.478 15.08 11.29 0.00 3.46
2921 5230 4.115516 CTCCGCCAGATATATCATTTCGG 58.884 47.826 20.23 20.23 36.06 4.30
2922 5231 3.767131 TCCGCCAGATATATCATTTCGGA 59.233 43.478 22.77 22.77 40.68 4.55
2923 5232 4.115516 CCGCCAGATATATCATTTCGGAG 58.884 47.826 21.04 12.52 36.77 4.63
2924 5233 4.115516 CGCCAGATATATCATTTCGGAGG 58.884 47.826 15.08 4.80 0.00 4.30
2925 5234 4.446371 GCCAGATATATCATTTCGGAGGG 58.554 47.826 15.08 3.59 0.00 4.30
2926 5235 4.162320 GCCAGATATATCATTTCGGAGGGA 59.838 45.833 15.08 0.00 0.00 4.20
2927 5236 5.163258 GCCAGATATATCATTTCGGAGGGAT 60.163 44.000 15.08 0.00 0.00 3.85
2928 5237 6.633583 GCCAGATATATCATTTCGGAGGGATT 60.634 42.308 15.08 0.00 0.00 3.01
2929 5238 7.341805 CCAGATATATCATTTCGGAGGGATTT 58.658 38.462 15.08 0.00 0.00 2.17
2930 5239 7.281774 CCAGATATATCATTTCGGAGGGATTTG 59.718 40.741 15.08 0.00 0.00 2.32
2931 5240 7.281774 CAGATATATCATTTCGGAGGGATTTGG 59.718 40.741 15.08 0.00 0.00 3.28
2932 5241 3.669939 ATCATTTCGGAGGGATTTGGT 57.330 42.857 0.00 0.00 0.00 3.67
2933 5242 3.449746 TCATTTCGGAGGGATTTGGTT 57.550 42.857 0.00 0.00 0.00 3.67
2934 5243 3.088532 TCATTTCGGAGGGATTTGGTTG 58.911 45.455 0.00 0.00 0.00 3.77
2935 5244 1.917872 TTTCGGAGGGATTTGGTTGG 58.082 50.000 0.00 0.00 0.00 3.77
2936 5245 0.039035 TTCGGAGGGATTTGGTTGGG 59.961 55.000 0.00 0.00 0.00 4.12
2937 5246 0.842905 TCGGAGGGATTTGGTTGGGA 60.843 55.000 0.00 0.00 0.00 4.37
2938 5247 0.679960 CGGAGGGATTTGGTTGGGAC 60.680 60.000 0.00 0.00 0.00 4.46
2939 5248 0.324368 GGAGGGATTTGGTTGGGACC 60.324 60.000 0.00 0.00 46.71 4.46
2940 5249 0.324368 GAGGGATTTGGTTGGGACCC 60.324 60.000 2.45 2.45 45.92 4.46
2941 5250 1.680989 GGGATTTGGTTGGGACCCG 60.681 63.158 5.91 0.00 45.92 5.28
2942 5251 1.076014 GGATTTGGTTGGGACCCGT 59.924 57.895 5.91 0.00 45.92 5.28
2943 5252 0.963856 GGATTTGGTTGGGACCCGTC 60.964 60.000 5.91 0.78 45.92 4.79
2944 5253 0.037734 GATTTGGTTGGGACCCGTCT 59.962 55.000 5.91 0.00 45.92 4.18
2945 5254 0.481128 ATTTGGTTGGGACCCGTCTT 59.519 50.000 5.91 0.00 45.92 3.01
2946 5255 0.466555 TTTGGTTGGGACCCGTCTTG 60.467 55.000 5.91 0.00 45.92 3.02
2947 5256 1.637724 TTGGTTGGGACCCGTCTTGT 61.638 55.000 5.91 0.00 45.92 3.16
2948 5257 0.763604 TGGTTGGGACCCGTCTTGTA 60.764 55.000 5.91 0.00 45.92 2.41
2949 5258 0.616891 GGTTGGGACCCGTCTTGTAT 59.383 55.000 5.91 0.00 40.25 2.29
2950 5259 1.406477 GGTTGGGACCCGTCTTGTATC 60.406 57.143 5.91 0.00 40.25 2.24
2951 5260 1.276989 GTTGGGACCCGTCTTGTATCA 59.723 52.381 5.91 0.00 0.00 2.15
2952 5261 1.874129 TGGGACCCGTCTTGTATCAT 58.126 50.000 5.91 0.00 0.00 2.45
2953 5262 1.484653 TGGGACCCGTCTTGTATCATG 59.515 52.381 5.91 0.00 0.00 3.07
2954 5263 1.760613 GGGACCCGTCTTGTATCATGA 59.239 52.381 0.00 0.00 0.00 3.07
2955 5264 2.483188 GGGACCCGTCTTGTATCATGAC 60.483 54.545 0.00 5.93 35.89 3.06
2956 5265 2.167693 GGACCCGTCTTGTATCATGACA 59.832 50.000 0.00 0.00 38.08 3.58
2957 5266 3.369052 GGACCCGTCTTGTATCATGACAA 60.369 47.826 0.00 0.00 38.08 3.18
2958 5267 3.596214 ACCCGTCTTGTATCATGACAAC 58.404 45.455 0.00 0.00 38.08 3.32
2959 5268 3.007506 ACCCGTCTTGTATCATGACAACA 59.992 43.478 0.00 2.73 38.08 3.33
2960 5269 4.191544 CCCGTCTTGTATCATGACAACAT 58.808 43.478 12.23 0.00 38.08 2.71
2970 5279 7.445121 TGTATCATGACAACATCTTCTATCCC 58.555 38.462 0.00 0.00 34.15 3.85
2972 5281 4.405680 TCATGACAACATCTTCTATCCCGT 59.594 41.667 0.00 0.00 34.15 5.28
2973 5282 4.819105 TGACAACATCTTCTATCCCGTT 57.181 40.909 0.00 0.00 0.00 4.44
2975 5284 4.935205 TGACAACATCTTCTATCCCGTTTG 59.065 41.667 0.00 0.00 0.00 2.93
2977 5286 9.426144 ATGACAACATCTTCTATCCCGTTTGGA 62.426 40.741 0.00 0.00 38.98 3.53
2988 5297 4.210724 TCCCGTTTGGATTCGATTAACT 57.789 40.909 0.00 0.00 38.61 2.24
2991 5300 4.393680 CCCGTTTGGATTCGATTAACTTGA 59.606 41.667 0.00 0.00 37.49 3.02
2992 5301 5.321516 CCGTTTGGATTCGATTAACTTGAC 58.678 41.667 0.00 0.00 37.49 3.18
2993 5302 5.106869 CCGTTTGGATTCGATTAACTTGACA 60.107 40.000 0.00 0.00 37.49 3.58
2994 5303 5.788531 CGTTTGGATTCGATTAACTTGACAC 59.211 40.000 0.00 0.00 0.00 3.67
2995 5304 6.565060 CGTTTGGATTCGATTAACTTGACACA 60.565 38.462 0.00 0.00 0.00 3.72
2996 5305 6.869315 TTGGATTCGATTAACTTGACACAA 57.131 33.333 0.00 0.00 0.00 3.33
2998 5307 5.411361 TGGATTCGATTAACTTGACACAAGG 59.589 40.000 14.51 0.00 0.00 3.61
2999 5308 4.742438 TTCGATTAACTTGACACAAGGC 57.258 40.909 14.51 0.00 0.00 4.35
3000 5309 3.071479 TCGATTAACTTGACACAAGGCC 58.929 45.455 14.51 0.00 0.00 5.19
3001 5310 2.159707 CGATTAACTTGACACAAGGCCG 60.160 50.000 14.51 7.34 0.00 6.13
3003 5312 0.250553 TAACTTGACACAAGGCCGGG 60.251 55.000 2.18 0.00 0.00 5.73
3004 5313 1.990160 AACTTGACACAAGGCCGGGA 61.990 55.000 2.18 0.00 0.00 5.14
3005 5314 1.002134 CTTGACACAAGGCCGGGAT 60.002 57.895 2.18 0.00 0.00 3.85
3006 5315 1.303236 TTGACACAAGGCCGGGATG 60.303 57.895 2.18 0.00 0.00 3.51
3007 5316 2.063015 TTGACACAAGGCCGGGATGT 62.063 55.000 2.18 0.04 0.00 3.06
3008 5317 1.745489 GACACAAGGCCGGGATGTC 60.745 63.158 2.18 14.11 33.50 3.06
3009 5318 2.185310 GACACAAGGCCGGGATGTCT 62.185 60.000 19.23 4.03 37.33 3.41
3010 5319 1.002134 CACAAGGCCGGGATGTCTT 60.002 57.895 2.18 0.00 0.00 3.01
3011 5320 0.609131 CACAAGGCCGGGATGTCTTT 60.609 55.000 2.18 0.00 0.00 2.52
3012 5321 0.322546 ACAAGGCCGGGATGTCTTTC 60.323 55.000 2.18 0.00 0.00 2.62
3013 5322 1.078426 AAGGCCGGGATGTCTTTCG 60.078 57.895 2.18 0.00 0.00 3.46
3014 5323 3.202706 GGCCGGGATGTCTTTCGC 61.203 66.667 2.18 0.00 0.00 4.70
3015 5324 2.125106 GCCGGGATGTCTTTCGCT 60.125 61.111 2.18 0.00 0.00 4.93
3016 5325 2.464459 GCCGGGATGTCTTTCGCTG 61.464 63.158 2.18 0.00 0.00 5.18
3017 5326 1.815421 CCGGGATGTCTTTCGCTGG 60.815 63.158 0.00 0.00 0.00 4.85
3018 5327 1.218047 CGGGATGTCTTTCGCTGGA 59.782 57.895 0.00 0.00 0.00 3.86
3019 5328 0.391130 CGGGATGTCTTTCGCTGGAA 60.391 55.000 0.00 0.00 0.00 3.53
3020 5329 1.743772 CGGGATGTCTTTCGCTGGAAT 60.744 52.381 0.00 0.00 30.88 3.01
3021 5330 1.943340 GGGATGTCTTTCGCTGGAATC 59.057 52.381 0.00 0.00 30.88 2.52
3022 5331 2.420687 GGGATGTCTTTCGCTGGAATCT 60.421 50.000 0.00 0.00 30.88 2.40
3023 5332 3.274288 GGATGTCTTTCGCTGGAATCTT 58.726 45.455 0.00 0.00 30.88 2.40
3024 5333 4.442706 GGATGTCTTTCGCTGGAATCTTA 58.557 43.478 0.00 0.00 30.88 2.10
3025 5334 4.271291 GGATGTCTTTCGCTGGAATCTTAC 59.729 45.833 0.00 0.00 30.88 2.34
3026 5335 4.537135 TGTCTTTCGCTGGAATCTTACT 57.463 40.909 0.00 0.00 30.88 2.24
3027 5336 5.654603 TGTCTTTCGCTGGAATCTTACTA 57.345 39.130 0.00 0.00 30.88 1.82
3028 5337 5.408356 TGTCTTTCGCTGGAATCTTACTAC 58.592 41.667 0.00 0.00 30.88 2.73
3029 5338 5.047590 TGTCTTTCGCTGGAATCTTACTACA 60.048 40.000 0.00 0.00 30.88 2.74
3030 5339 6.043411 GTCTTTCGCTGGAATCTTACTACAT 58.957 40.000 0.00 0.00 30.88 2.29
3031 5340 6.535508 GTCTTTCGCTGGAATCTTACTACATT 59.464 38.462 0.00 0.00 30.88 2.71
3032 5341 7.064728 GTCTTTCGCTGGAATCTTACTACATTT 59.935 37.037 0.00 0.00 30.88 2.32
3033 5342 6.662414 TTCGCTGGAATCTTACTACATTTG 57.338 37.500 0.00 0.00 0.00 2.32
3034 5343 5.972935 TCGCTGGAATCTTACTACATTTGA 58.027 37.500 0.00 0.00 0.00 2.69
3035 5344 6.403049 TCGCTGGAATCTTACTACATTTGAA 58.597 36.000 0.00 0.00 0.00 2.69
3036 5345 6.535150 TCGCTGGAATCTTACTACATTTGAAG 59.465 38.462 0.00 0.00 0.00 3.02
3037 5346 6.238211 CGCTGGAATCTTACTACATTTGAAGG 60.238 42.308 0.00 0.00 0.00 3.46
3038 5347 6.599638 GCTGGAATCTTACTACATTTGAAGGT 59.400 38.462 0.00 0.00 0.00 3.50
3039 5348 7.121315 GCTGGAATCTTACTACATTTGAAGGTT 59.879 37.037 0.00 0.00 0.00 3.50
3040 5349 8.934023 TGGAATCTTACTACATTTGAAGGTTT 57.066 30.769 0.00 0.00 0.00 3.27
3041 5350 9.362151 TGGAATCTTACTACATTTGAAGGTTTT 57.638 29.630 0.00 0.00 0.00 2.43
3042 5351 9.841880 GGAATCTTACTACATTTGAAGGTTTTC 57.158 33.333 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.342473 CCCGAAATACGTTGTCGCG 59.658 57.895 0.00 0.00 41.18 5.87
16 17 0.179056 CCTCATGCCCCGAAATACGT 60.179 55.000 0.00 0.00 40.78 3.57
17 18 0.179056 ACCTCATGCCCCGAAATACG 60.179 55.000 0.00 0.00 42.18 3.06
25 26 1.002624 TTCGACAACCTCATGCCCC 60.003 57.895 0.00 0.00 0.00 5.80
28 29 0.955428 TGGCTTCGACAACCTCATGC 60.955 55.000 0.00 0.00 0.00 4.06
29 30 1.742761 ATGGCTTCGACAACCTCATG 58.257 50.000 0.00 0.00 0.00 3.07
31 32 1.522668 CAATGGCTTCGACAACCTCA 58.477 50.000 0.00 0.00 0.00 3.86
32 33 0.804989 CCAATGGCTTCGACAACCTC 59.195 55.000 0.00 0.00 0.00 3.85
45 46 1.008194 CCATCGCGAATGCCAATGG 60.008 57.895 15.24 11.01 41.69 3.16
51 52 2.715624 GGTTCCCATCGCGAATGC 59.284 61.111 15.24 0.09 33.71 3.56
82 83 2.885135 ACATGCTTCTCCATCCAACA 57.115 45.000 0.00 0.00 0.00 3.33
86 87 2.173569 ACCCTAACATGCTTCTCCATCC 59.826 50.000 0.00 0.00 0.00 3.51
88 89 2.578021 ACACCCTAACATGCTTCTCCAT 59.422 45.455 0.00 0.00 0.00 3.41
89 90 1.985159 ACACCCTAACATGCTTCTCCA 59.015 47.619 0.00 0.00 0.00 3.86
90 91 2.789409 ACACCCTAACATGCTTCTCC 57.211 50.000 0.00 0.00 0.00 3.71
91 92 3.617263 CGTAACACCCTAACATGCTTCTC 59.383 47.826 0.00 0.00 0.00 2.87
92 93 3.259876 TCGTAACACCCTAACATGCTTCT 59.740 43.478 0.00 0.00 0.00 2.85
93 94 3.592059 TCGTAACACCCTAACATGCTTC 58.408 45.455 0.00 0.00 0.00 3.86
94 95 3.688694 TCGTAACACCCTAACATGCTT 57.311 42.857 0.00 0.00 0.00 3.91
95 96 3.906720 ATCGTAACACCCTAACATGCT 57.093 42.857 0.00 0.00 0.00 3.79
96 97 4.438200 CCAAATCGTAACACCCTAACATGC 60.438 45.833 0.00 0.00 0.00 4.06
97 98 4.095782 CCCAAATCGTAACACCCTAACATG 59.904 45.833 0.00 0.00 0.00 3.21
98 99 4.263594 ACCCAAATCGTAACACCCTAACAT 60.264 41.667 0.00 0.00 0.00 2.71
99 100 3.072768 ACCCAAATCGTAACACCCTAACA 59.927 43.478 0.00 0.00 0.00 2.41
100 101 3.678289 ACCCAAATCGTAACACCCTAAC 58.322 45.455 0.00 0.00 0.00 2.34
101 102 4.073549 CAACCCAAATCGTAACACCCTAA 58.926 43.478 0.00 0.00 0.00 2.69
102 103 3.559597 CCAACCCAAATCGTAACACCCTA 60.560 47.826 0.00 0.00 0.00 3.53
103 104 2.510613 CAACCCAAATCGTAACACCCT 58.489 47.619 0.00 0.00 0.00 4.34
104 105 1.542472 CCAACCCAAATCGTAACACCC 59.458 52.381 0.00 0.00 0.00 4.61
105 106 1.542472 CCCAACCCAAATCGTAACACC 59.458 52.381 0.00 0.00 0.00 4.16
106 107 1.542472 CCCCAACCCAAATCGTAACAC 59.458 52.381 0.00 0.00 0.00 3.32
107 108 1.548128 CCCCCAACCCAAATCGTAACA 60.548 52.381 0.00 0.00 0.00 2.41
108 109 1.179152 CCCCCAACCCAAATCGTAAC 58.821 55.000 0.00 0.00 0.00 2.50
109 110 3.674029 CCCCCAACCCAAATCGTAA 57.326 52.632 0.00 0.00 0.00 3.18
135 136 2.937959 TTTTGCCACCACCACCCTCC 62.938 60.000 0.00 0.00 0.00 4.30
136 137 1.456705 TTTTGCCACCACCACCCTC 60.457 57.895 0.00 0.00 0.00 4.30
137 138 1.457455 CTTTTGCCACCACCACCCT 60.457 57.895 0.00 0.00 0.00 4.34
138 139 3.137687 CTTTTGCCACCACCACCC 58.862 61.111 0.00 0.00 0.00 4.61
139 140 2.421314 GCTTTTGCCACCACCACC 59.579 61.111 0.00 0.00 40.15 4.61
140 141 2.027460 CGCTTTTGCCACCACCAC 59.973 61.111 0.00 0.00 43.93 4.16
141 142 3.910490 GCGCTTTTGCCACCACCA 61.910 61.111 0.00 0.00 43.93 4.17
142 143 3.438017 TTGCGCTTTTGCCACCACC 62.438 57.895 9.73 0.00 43.93 4.61
143 144 1.950630 CTTGCGCTTTTGCCACCAC 60.951 57.895 9.73 0.00 43.93 4.16
144 145 2.416678 CTTGCGCTTTTGCCACCA 59.583 55.556 9.73 0.00 43.93 4.17
145 146 1.950630 CACTTGCGCTTTTGCCACC 60.951 57.895 9.73 0.00 43.93 4.61
146 147 0.805711 AACACTTGCGCTTTTGCCAC 60.806 50.000 9.73 0.00 43.93 5.01
147 148 0.108424 AAACACTTGCGCTTTTGCCA 60.108 45.000 9.73 0.00 43.93 4.92
148 149 1.006086 AAAACACTTGCGCTTTTGCC 58.994 45.000 9.73 0.00 43.93 4.52
149 150 1.393196 ACAAAACACTTGCGCTTTTGC 59.607 42.857 23.68 0.00 38.08 3.68
150 151 3.720818 AACAAAACACTTGCGCTTTTG 57.279 38.095 22.70 22.70 39.66 2.44
151 152 5.847670 TTAAACAAAACACTTGCGCTTTT 57.152 30.435 9.73 3.44 0.00 2.27
152 153 7.527084 TTATTAAACAAAACACTTGCGCTTT 57.473 28.000 9.73 0.00 0.00 3.51
153 154 7.707774 ATTATTAAACAAAACACTTGCGCTT 57.292 28.000 9.73 0.00 0.00 4.68
154 155 8.293867 TCTATTATTAAACAAAACACTTGCGCT 58.706 29.630 9.73 0.00 0.00 5.92
155 156 8.442605 TCTATTATTAAACAAAACACTTGCGC 57.557 30.769 0.00 0.00 0.00 6.09
199 502 7.541437 GTGAATGGAGTGAAGTAACTACAGTAC 59.459 40.741 0.00 0.00 44.22 2.73
200 503 7.231925 TGTGAATGGAGTGAAGTAACTACAGTA 59.768 37.037 0.00 0.00 44.22 2.74
201 504 6.041637 TGTGAATGGAGTGAAGTAACTACAGT 59.958 38.462 0.00 0.00 44.22 3.55
202 505 6.455647 TGTGAATGGAGTGAAGTAACTACAG 58.544 40.000 0.00 0.00 44.22 2.74
203 506 6.413783 TGTGAATGGAGTGAAGTAACTACA 57.586 37.500 0.00 0.00 45.08 2.74
214 517 3.062099 CGATACCGTTTGTGAATGGAGTG 59.938 47.826 4.50 0.00 43.43 3.51
223 526 1.066716 TCCCCTTCGATACCGTTTGTG 60.067 52.381 0.00 0.00 37.05 3.33
234 537 2.036604 GCCAAAATGTTTTCCCCTTCGA 59.963 45.455 0.00 0.00 0.00 3.71
236 539 3.557054 GGAGCCAAAATGTTTTCCCCTTC 60.557 47.826 0.00 0.00 0.00 3.46
239 542 1.696884 TGGAGCCAAAATGTTTTCCCC 59.303 47.619 0.00 0.00 0.00 4.81
243 546 3.903090 TCATCCTGGAGCCAAAATGTTTT 59.097 39.130 1.52 0.00 0.00 2.43
244 547 3.509442 TCATCCTGGAGCCAAAATGTTT 58.491 40.909 1.52 0.00 0.00 2.83
247 550 4.891756 ACTATTCATCCTGGAGCCAAAATG 59.108 41.667 1.52 0.00 0.00 2.32
248 551 4.891756 CACTATTCATCCTGGAGCCAAAAT 59.108 41.667 1.52 0.49 0.00 1.82
251 556 2.846206 ACACTATTCATCCTGGAGCCAA 59.154 45.455 1.52 0.00 0.00 4.52
254 559 5.053145 CAGTTACACTATTCATCCTGGAGC 58.947 45.833 1.52 0.00 0.00 4.70
315 641 4.800993 CGAAACTACACAGGCAGATAAGAG 59.199 45.833 0.00 0.00 0.00 2.85
317 643 4.327357 CACGAAACTACACAGGCAGATAAG 59.673 45.833 0.00 0.00 0.00 1.73
326 652 7.582679 CACTTATTTGTTCACGAAACTACACAG 59.417 37.037 0.00 0.00 38.76 3.66
329 655 7.064847 ACACACTTATTTGTTCACGAAACTACA 59.935 33.333 0.00 0.00 38.76 2.74
330 656 7.404203 ACACACTTATTTGTTCACGAAACTAC 58.596 34.615 0.00 0.00 38.76 2.73
331 657 7.542534 ACACACTTATTTGTTCACGAAACTA 57.457 32.000 0.00 0.00 38.76 2.24
352 678 9.476202 ACAATTTTTCTTTTGCCTAGATTACAC 57.524 29.630 0.00 0.00 0.00 2.90
360 686 9.787435 TCTAGAGTACAATTTTTCTTTTGCCTA 57.213 29.630 0.00 0.00 0.00 3.93
361 687 8.691661 TCTAGAGTACAATTTTTCTTTTGCCT 57.308 30.769 0.00 0.00 0.00 4.75
370 696 7.021998 AGAGCCCTTCTAGAGTACAATTTTT 57.978 36.000 0.00 0.00 33.23 1.94
375 701 6.154706 CCTAAAAGAGCCCTTCTAGAGTACAA 59.845 42.308 0.00 0.00 34.14 2.41
408 734 8.786028 GCGCAAATTGTACTAAGAAAAATAGTC 58.214 33.333 0.30 0.00 35.34 2.59
409 735 8.512138 AGCGCAAATTGTACTAAGAAAAATAGT 58.488 29.630 11.47 0.00 37.39 2.12
410 736 8.895932 AGCGCAAATTGTACTAAGAAAAATAG 57.104 30.769 11.47 0.00 0.00 1.73
412 738 7.651704 ACAAGCGCAAATTGTACTAAGAAAAAT 59.348 29.630 11.47 0.00 39.06 1.82
455 782 3.007940 TCATGTCCTTTTCCGTGTCTGAT 59.992 43.478 0.00 0.00 0.00 2.90
463 790 6.918892 TGTATATGTTCATGTCCTTTTCCG 57.081 37.500 0.00 0.00 0.00 4.30
510 837 9.927668 CAGGTGAAAAGGTTAAATTATGAATGT 57.072 29.630 0.00 0.00 0.00 2.71
511 838 8.872845 GCAGGTGAAAAGGTTAAATTATGAATG 58.127 33.333 0.00 0.00 0.00 2.67
512 839 7.759433 CGCAGGTGAAAAGGTTAAATTATGAAT 59.241 33.333 0.00 0.00 0.00 2.57
513 840 7.040340 TCGCAGGTGAAAAGGTTAAATTATGAA 60.040 33.333 0.00 0.00 0.00 2.57
514 841 6.431543 TCGCAGGTGAAAAGGTTAAATTATGA 59.568 34.615 0.00 0.00 0.00 2.15
515 842 6.616947 TCGCAGGTGAAAAGGTTAAATTATG 58.383 36.000 0.00 0.00 0.00 1.90
516 843 6.827586 TCGCAGGTGAAAAGGTTAAATTAT 57.172 33.333 0.00 0.00 0.00 1.28
517 844 6.039493 TGTTCGCAGGTGAAAAGGTTAAATTA 59.961 34.615 0.00 0.00 0.00 1.40
518 845 5.163499 TGTTCGCAGGTGAAAAGGTTAAATT 60.163 36.000 0.00 0.00 0.00 1.82
519 846 4.339814 TGTTCGCAGGTGAAAAGGTTAAAT 59.660 37.500 0.00 0.00 0.00 1.40
520 847 3.695060 TGTTCGCAGGTGAAAAGGTTAAA 59.305 39.130 0.00 0.00 0.00 1.52
521 848 3.280295 TGTTCGCAGGTGAAAAGGTTAA 58.720 40.909 0.00 0.00 0.00 2.01
522 849 2.920524 TGTTCGCAGGTGAAAAGGTTA 58.079 42.857 0.00 0.00 0.00 2.85
523 850 1.757682 TGTTCGCAGGTGAAAAGGTT 58.242 45.000 0.00 0.00 0.00 3.50
524 851 1.981256 ATGTTCGCAGGTGAAAAGGT 58.019 45.000 0.00 0.00 0.00 3.50
525 852 3.731867 GCATATGTTCGCAGGTGAAAAGG 60.732 47.826 4.29 0.00 0.00 3.11
526 853 3.127548 AGCATATGTTCGCAGGTGAAAAG 59.872 43.478 4.29 0.00 0.00 2.27
537 864 0.583438 CGCCAAGGAGCATATGTTCG 59.417 55.000 12.72 1.37 0.00 3.95
555 882 4.726704 CCTTTACGAATATTCAAAACGGCG 59.273 41.667 15.57 4.80 0.00 6.46
589 916 9.783256 GTGCTAAGAAAAAGTCAACTAAGAAAA 57.217 29.630 0.00 0.00 0.00 2.29
590 917 8.120465 CGTGCTAAGAAAAAGTCAACTAAGAAA 58.880 33.333 0.00 0.00 0.00 2.52
591 918 7.254658 CCGTGCTAAGAAAAAGTCAACTAAGAA 60.255 37.037 0.00 0.00 0.00 2.52
592 919 6.202188 CCGTGCTAAGAAAAAGTCAACTAAGA 59.798 38.462 0.00 0.00 0.00 2.10
593 920 6.018180 ACCGTGCTAAGAAAAAGTCAACTAAG 60.018 38.462 0.00 0.00 0.00 2.18
594 921 5.818857 ACCGTGCTAAGAAAAAGTCAACTAA 59.181 36.000 0.00 0.00 0.00 2.24
595 922 5.362263 ACCGTGCTAAGAAAAAGTCAACTA 58.638 37.500 0.00 0.00 0.00 2.24
596 923 4.196971 ACCGTGCTAAGAAAAAGTCAACT 58.803 39.130 0.00 0.00 0.00 3.16
597 924 4.547406 ACCGTGCTAAGAAAAAGTCAAC 57.453 40.909 0.00 0.00 0.00 3.18
598 925 4.636648 TGAACCGTGCTAAGAAAAAGTCAA 59.363 37.500 0.00 0.00 0.00 3.18
599 926 4.034742 GTGAACCGTGCTAAGAAAAAGTCA 59.965 41.667 0.00 0.00 0.00 3.41
600 927 4.034742 TGTGAACCGTGCTAAGAAAAAGTC 59.965 41.667 0.00 0.00 0.00 3.01
601 928 3.942748 TGTGAACCGTGCTAAGAAAAAGT 59.057 39.130 0.00 0.00 0.00 2.66
602 929 4.545823 TGTGAACCGTGCTAAGAAAAAG 57.454 40.909 0.00 0.00 0.00 2.27
642 969 5.749596 ATGTTCGTGTCTGTGAATTTTGA 57.250 34.783 0.00 0.00 0.00 2.69
643 970 8.655970 TCTATATGTTCGTGTCTGTGAATTTTG 58.344 33.333 0.00 0.00 0.00 2.44
668 995 9.467258 TTCTCAATGTCAACAGAAATTGAAATC 57.533 29.630 11.11 0.00 42.50 2.17
669 996 9.820725 TTTCTCAATGTCAACAGAAATTGAAAT 57.179 25.926 11.11 0.00 42.50 2.17
679 1006 9.533253 AAAAGGTAAATTTCTCAATGTCAACAG 57.467 29.630 0.00 0.00 0.00 3.16
722 1050 0.252835 AAAATGGCCCCAAGGAGCAT 60.253 50.000 0.00 0.00 33.47 3.79
733 1061 5.068591 ACCTTTACGGATATTCAAAATGGCC 59.931 40.000 0.00 0.00 36.31 5.36
734 1062 6.039382 AGACCTTTACGGATATTCAAAATGGC 59.961 38.462 0.00 0.00 36.31 4.40
753 2057 7.645058 TCAAATGAAAGAGAAAACAGACCTT 57.355 32.000 0.00 0.00 0.00 3.50
782 2086 3.892588 TGGGCCTTACGTTTTTCTCAAAT 59.107 39.130 4.53 0.00 0.00 2.32
814 2118 7.099120 AGCAAATGGGCTTTAGTGATAAAAAG 58.901 34.615 0.00 0.00 42.71 2.27
815 2119 7.003402 AGCAAATGGGCTTTAGTGATAAAAA 57.997 32.000 0.00 0.00 42.71 1.94
817 2121 5.163663 CGAGCAAATGGGCTTTAGTGATAAA 60.164 40.000 0.00 0.00 45.99 1.40
818 2122 4.335315 CGAGCAAATGGGCTTTAGTGATAA 59.665 41.667 0.00 0.00 45.99 1.75
819 2123 3.876914 CGAGCAAATGGGCTTTAGTGATA 59.123 43.478 0.00 0.00 45.99 2.15
820 2124 2.684881 CGAGCAAATGGGCTTTAGTGAT 59.315 45.455 0.00 0.00 45.99 3.06
821 2125 2.083774 CGAGCAAATGGGCTTTAGTGA 58.916 47.619 0.00 0.00 45.99 3.41
823 2127 2.488153 GTTCGAGCAAATGGGCTTTAGT 59.512 45.455 0.00 0.00 45.99 2.24
824 2128 2.476185 CGTTCGAGCAAATGGGCTTTAG 60.476 50.000 0.00 0.00 45.99 1.85
825 2129 1.466950 CGTTCGAGCAAATGGGCTTTA 59.533 47.619 0.00 0.00 45.99 1.85
837 2141 1.514136 CTTCGCAATTTCGTTCGAGC 58.486 50.000 0.00 0.00 32.31 5.03
1297 2637 2.187946 CTTACGGCCCCAGCTCTG 59.812 66.667 0.00 0.00 39.73 3.35
1355 2698 4.101448 GGCACTCCCAGACGCCAT 62.101 66.667 0.00 0.00 44.25 4.40
2044 3948 2.097825 GGCAATCAGCTCCTTGACAAT 58.902 47.619 8.61 0.00 44.79 2.71
2083 3987 4.521146 AGAATCAACCATTACTGAGCTGG 58.479 43.478 0.00 0.00 36.09 4.85
2093 3997 7.504911 CCTAGGATCAATCAAGAATCAACCATT 59.495 37.037 1.05 0.00 0.00 3.16
2130 4112 1.616159 AACTTGATGGTTCCCAACGG 58.384 50.000 0.00 0.00 36.95 4.44
2144 4126 6.648310 AGCATGCATATGTAGCTAGTAACTTG 59.352 38.462 21.98 0.00 36.65 3.16
2145 4127 6.763355 AGCATGCATATGTAGCTAGTAACTT 58.237 36.000 21.98 0.00 36.65 2.66
2147 4129 6.393990 AGAGCATGCATATGTAGCTAGTAAC 58.606 40.000 21.98 6.32 36.65 2.50
2204 4187 6.980397 GGTCACTTTGAACATGACAAGAAAAT 59.020 34.615 0.00 0.00 43.73 1.82
2224 4207 4.752101 GCAATGATAGTAGGATGTGGTCAC 59.248 45.833 0.00 0.00 0.00 3.67
2229 4212 8.448615 CACATAATGCAATGATAGTAGGATGTG 58.551 37.037 5.39 0.46 35.02 3.21
2266 4250 8.537728 TGCCCTTCATTACTGATTAATTGATT 57.462 30.769 0.00 0.00 0.00 2.57
2267 4251 8.716674 ATGCCCTTCATTACTGATTAATTGAT 57.283 30.769 0.00 0.00 29.16 2.57
2268 4252 8.415553 CAATGCCCTTCATTACTGATTAATTGA 58.584 33.333 0.00 0.00 43.21 2.57
2269 4253 8.199449 ACAATGCCCTTCATTACTGATTAATTG 58.801 33.333 0.00 0.00 43.21 2.32
2340 4609 3.754323 AGACGTTTCTCCACACACAAAAA 59.246 39.130 0.00 0.00 0.00 1.94
2341 4610 3.126171 CAGACGTTTCTCCACACACAAAA 59.874 43.478 0.00 0.00 0.00 2.44
2345 4614 1.935933 ACAGACGTTTCTCCACACAC 58.064 50.000 0.00 0.00 0.00 3.82
2347 4616 2.540101 CAGAACAGACGTTTCTCCACAC 59.460 50.000 0.00 0.00 34.75 3.82
2349 4618 1.527311 GCAGAACAGACGTTTCTCCAC 59.473 52.381 0.00 0.00 34.75 4.02
2410 4679 8.243426 ACGTACTGTATATCCGAAACACTTTTA 58.757 33.333 3.07 0.00 0.00 1.52
2411 4680 7.092716 ACGTACTGTATATCCGAAACACTTTT 58.907 34.615 3.07 0.00 0.00 2.27
2412 4681 6.624423 ACGTACTGTATATCCGAAACACTTT 58.376 36.000 3.07 0.00 0.00 2.66
2413 4682 6.199937 ACGTACTGTATATCCGAAACACTT 57.800 37.500 3.07 0.00 0.00 3.16
2414 4683 5.824904 ACGTACTGTATATCCGAAACACT 57.175 39.130 3.07 0.00 0.00 3.55
2415 4684 9.107367 GTTATACGTACTGTATATCCGAAACAC 57.893 37.037 14.20 7.07 43.71 3.32
2416 4685 8.009409 CGTTATACGTACTGTATATCCGAAACA 58.991 37.037 18.82 0.00 43.71 2.83
2427 4696 7.990541 AAATTCATGCGTTATACGTACTGTA 57.009 32.000 0.00 0.00 44.73 2.74
2428 4697 6.897259 AAATTCATGCGTTATACGTACTGT 57.103 33.333 0.00 0.00 44.73 3.55
2429 4698 7.372396 GGAAAAATTCATGCGTTATACGTACTG 59.628 37.037 0.00 0.00 44.73 2.74
2430 4699 7.279313 AGGAAAAATTCATGCGTTATACGTACT 59.721 33.333 0.00 0.00 44.73 2.73
2431 4700 7.404203 AGGAAAAATTCATGCGTTATACGTAC 58.596 34.615 0.00 0.00 44.73 3.67
2432 4701 7.542534 AGGAAAAATTCATGCGTTATACGTA 57.457 32.000 0.00 0.00 44.73 3.57
2433 4702 6.431198 AGGAAAAATTCATGCGTTATACGT 57.569 33.333 0.00 0.00 44.73 3.57
2434 4703 8.829514 TTAAGGAAAAATTCATGCGTTATACG 57.170 30.769 0.00 0.00 45.88 3.06
2436 4705 9.743057 CCATTAAGGAAAAATTCATGCGTTATA 57.257 29.630 0.00 0.00 41.22 0.98
2481 4751 5.464057 TCGACTTACAAAAGAAAATCGCAGA 59.536 36.000 0.00 0.00 37.42 4.26
2514 4787 5.125417 GCATCAGCAAATTAAAGTCACCCTA 59.875 40.000 0.00 0.00 41.58 3.53
2555 4829 2.865079 TCCATTAAAAGTGCAACCGGA 58.135 42.857 9.46 0.00 37.80 5.14
2622 4896 5.822519 TGCAAACTGGAGATCATACATAACC 59.177 40.000 0.00 0.00 0.00 2.85
2674 4982 4.037208 GGACAATGGATTTGCGAGATCATT 59.963 41.667 0.00 0.00 39.03 2.57
2708 5017 1.631405 CCATCAGACCAGCCCAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
2709 5018 0.899717 GCCATCAGACCAGCCCAAAA 60.900 55.000 0.00 0.00 0.00 2.44
2710 5019 1.304381 GCCATCAGACCAGCCCAAA 60.304 57.895 0.00 0.00 0.00 3.28
2711 5020 2.356278 GCCATCAGACCAGCCCAA 59.644 61.111 0.00 0.00 0.00 4.12
2712 5021 2.934932 TGCCATCAGACCAGCCCA 60.935 61.111 0.00 0.00 0.00 5.36
2713 5022 1.626356 TACTGCCATCAGACCAGCCC 61.626 60.000 0.00 0.00 42.95 5.19
2715 5024 2.012673 CTTTACTGCCATCAGACCAGC 58.987 52.381 0.00 0.00 42.95 4.85
2716 5025 3.616956 TCTTTACTGCCATCAGACCAG 57.383 47.619 0.00 0.00 42.95 4.00
2719 5028 5.645497 AGATGTTTCTTTACTGCCATCAGAC 59.355 40.000 0.00 0.00 42.95 3.51
2720 5029 5.809001 AGATGTTTCTTTACTGCCATCAGA 58.191 37.500 0.00 0.00 42.95 3.27
2721 5030 6.506500 AAGATGTTTCTTTACTGCCATCAG 57.493 37.500 0.00 0.00 39.18 2.90
2748 5057 2.135664 ATCGCTAAGGATCCGAAACG 57.864 50.000 5.98 9.86 34.42 3.60
2749 5058 4.448060 CCTTTATCGCTAAGGATCCGAAAC 59.552 45.833 5.98 0.00 44.01 2.78
2750 5059 4.342951 TCCTTTATCGCTAAGGATCCGAAA 59.657 41.667 5.98 0.00 44.72 3.46
2751 5060 3.893200 TCCTTTATCGCTAAGGATCCGAA 59.107 43.478 5.98 0.00 44.72 4.30
2752 5061 3.493334 TCCTTTATCGCTAAGGATCCGA 58.507 45.455 5.98 0.00 44.72 4.55
2753 5062 3.936372 TCCTTTATCGCTAAGGATCCG 57.064 47.619 5.98 0.00 44.72 4.18
2757 5066 1.068127 GCCGTCCTTTATCGCTAAGGA 59.932 52.381 8.17 8.17 46.77 3.36
2758 5067 1.068741 AGCCGTCCTTTATCGCTAAGG 59.931 52.381 0.00 0.00 42.89 2.69
2759 5068 2.395654 GAGCCGTCCTTTATCGCTAAG 58.604 52.381 0.00 0.00 0.00 2.18
2760 5069 1.268896 CGAGCCGTCCTTTATCGCTAA 60.269 52.381 0.00 0.00 0.00 3.09
2761 5070 0.309922 CGAGCCGTCCTTTATCGCTA 59.690 55.000 0.00 0.00 0.00 4.26
2762 5071 1.065928 CGAGCCGTCCTTTATCGCT 59.934 57.895 0.00 0.00 0.00 4.93
2763 5072 1.949631 CCGAGCCGTCCTTTATCGC 60.950 63.158 0.00 0.00 32.23 4.58
2764 5073 0.317938 CTCCGAGCCGTCCTTTATCG 60.318 60.000 0.00 0.00 0.00 2.92
2765 5074 1.030457 TCTCCGAGCCGTCCTTTATC 58.970 55.000 0.00 0.00 0.00 1.75
2766 5075 1.705873 ATCTCCGAGCCGTCCTTTAT 58.294 50.000 0.00 0.00 0.00 1.40
2767 5076 1.952296 GTATCTCCGAGCCGTCCTTTA 59.048 52.381 0.00 0.00 0.00 1.85
2768 5077 0.745468 GTATCTCCGAGCCGTCCTTT 59.255 55.000 0.00 0.00 0.00 3.11
2769 5078 1.445716 CGTATCTCCGAGCCGTCCTT 61.446 60.000 0.00 0.00 0.00 3.36
2770 5079 1.892862 CGTATCTCCGAGCCGTCCT 60.893 63.158 0.00 0.00 0.00 3.85
2771 5080 2.638154 CGTATCTCCGAGCCGTCC 59.362 66.667 0.00 0.00 0.00 4.79
2772 5081 2.051166 GCGTATCTCCGAGCCGTC 60.051 66.667 0.00 0.00 0.00 4.79
2773 5082 2.061182 GAAGCGTATCTCCGAGCCGT 62.061 60.000 0.00 0.00 0.00 5.68
2774 5083 1.370657 GAAGCGTATCTCCGAGCCG 60.371 63.158 0.00 0.00 0.00 5.52
2775 5084 0.318275 CAGAAGCGTATCTCCGAGCC 60.318 60.000 0.00 0.00 0.00 4.70
2776 5085 0.318275 CCAGAAGCGTATCTCCGAGC 60.318 60.000 0.00 0.00 0.00 5.03
2777 5086 0.312416 CCCAGAAGCGTATCTCCGAG 59.688 60.000 0.00 0.00 0.00 4.63
2778 5087 0.106868 TCCCAGAAGCGTATCTCCGA 60.107 55.000 0.00 0.00 0.00 4.55
2779 5088 0.312416 CTCCCAGAAGCGTATCTCCG 59.688 60.000 0.00 0.00 0.00 4.63
2780 5089 1.693627 TCTCCCAGAAGCGTATCTCC 58.306 55.000 0.00 0.00 0.00 3.71
2781 5090 2.427453 TGTTCTCCCAGAAGCGTATCTC 59.573 50.000 0.00 0.00 34.42 2.75
2782 5091 2.457598 TGTTCTCCCAGAAGCGTATCT 58.542 47.619 0.00 0.00 34.42 1.98
2783 5092 2.961526 TGTTCTCCCAGAAGCGTATC 57.038 50.000 0.00 0.00 34.42 2.24
2784 5093 2.567615 ACTTGTTCTCCCAGAAGCGTAT 59.432 45.455 0.00 0.00 34.42 3.06
2785 5094 1.968493 ACTTGTTCTCCCAGAAGCGTA 59.032 47.619 0.00 0.00 34.42 4.42
2786 5095 0.759346 ACTTGTTCTCCCAGAAGCGT 59.241 50.000 0.00 0.00 34.42 5.07
2787 5096 1.151668 CACTTGTTCTCCCAGAAGCG 58.848 55.000 0.00 0.00 34.42 4.68
2788 5097 1.528129 CCACTTGTTCTCCCAGAAGC 58.472 55.000 0.00 0.00 34.42 3.86
2789 5098 1.072965 AGCCACTTGTTCTCCCAGAAG 59.927 52.381 0.00 0.00 34.42 2.85
2790 5099 1.140312 AGCCACTTGTTCTCCCAGAA 58.860 50.000 0.00 0.00 0.00 3.02
2791 5100 1.902508 CTAGCCACTTGTTCTCCCAGA 59.097 52.381 0.00 0.00 0.00 3.86
2792 5101 1.065854 CCTAGCCACTTGTTCTCCCAG 60.066 57.143 0.00 0.00 0.00 4.45
2793 5102 0.984230 CCTAGCCACTTGTTCTCCCA 59.016 55.000 0.00 0.00 0.00 4.37
2794 5103 1.276622 TCCTAGCCACTTGTTCTCCC 58.723 55.000 0.00 0.00 0.00 4.30
2795 5104 3.418684 TTTCCTAGCCACTTGTTCTCC 57.581 47.619 0.00 0.00 0.00 3.71
2796 5105 4.876679 GGTATTTCCTAGCCACTTGTTCTC 59.123 45.833 0.00 0.00 0.00 2.87
2797 5106 4.288626 TGGTATTTCCTAGCCACTTGTTCT 59.711 41.667 0.00 0.00 37.07 3.01
2798 5107 4.395231 GTGGTATTTCCTAGCCACTTGTTC 59.605 45.833 7.49 0.00 45.64 3.18
2799 5108 4.332828 GTGGTATTTCCTAGCCACTTGTT 58.667 43.478 7.49 0.00 45.64 2.83
2800 5109 3.951663 GTGGTATTTCCTAGCCACTTGT 58.048 45.455 7.49 0.00 45.64 3.16
2805 5114 3.039011 GGAGAGTGGTATTTCCTAGCCA 58.961 50.000 0.00 0.00 37.07 4.75
2806 5115 2.036089 CGGAGAGTGGTATTTCCTAGCC 59.964 54.545 0.00 0.00 37.07 3.93
2807 5116 2.957006 TCGGAGAGTGGTATTTCCTAGC 59.043 50.000 0.00 0.00 37.07 3.42
2822 5131 1.835494 CTGGGTACTGTTCTCGGAGA 58.165 55.000 2.97 2.97 0.00 3.71
2823 5132 0.173708 GCTGGGTACTGTTCTCGGAG 59.826 60.000 0.00 0.00 0.00 4.63
2824 5133 1.255667 GGCTGGGTACTGTTCTCGGA 61.256 60.000 0.00 0.00 0.00 4.55
2825 5134 1.218316 GGCTGGGTACTGTTCTCGG 59.782 63.158 0.00 0.00 0.00 4.63
2826 5135 0.608640 AAGGCTGGGTACTGTTCTCG 59.391 55.000 0.00 0.00 0.00 4.04
2827 5136 1.348036 ACAAGGCTGGGTACTGTTCTC 59.652 52.381 0.00 0.00 0.00 2.87
2828 5137 1.435256 ACAAGGCTGGGTACTGTTCT 58.565 50.000 0.00 0.00 0.00 3.01
2829 5138 2.614734 GGTACAAGGCTGGGTACTGTTC 60.615 54.545 21.74 6.34 39.76 3.18
2830 5139 1.350019 GGTACAAGGCTGGGTACTGTT 59.650 52.381 21.74 0.00 39.76 3.16
2831 5140 0.981943 GGTACAAGGCTGGGTACTGT 59.018 55.000 21.74 10.18 39.76 3.55
2832 5141 0.108329 CGGTACAAGGCTGGGTACTG 60.108 60.000 21.74 20.13 39.76 2.74
2833 5142 1.896122 GCGGTACAAGGCTGGGTACT 61.896 60.000 21.74 0.00 39.76 2.73
2834 5143 1.449070 GCGGTACAAGGCTGGGTAC 60.449 63.158 17.03 17.03 39.25 3.34
2835 5144 1.268992 ATGCGGTACAAGGCTGGGTA 61.269 55.000 0.00 0.00 0.00 3.69
2836 5145 2.137177 AATGCGGTACAAGGCTGGGT 62.137 55.000 0.00 0.00 0.00 4.51
2837 5146 1.378514 AATGCGGTACAAGGCTGGG 60.379 57.895 0.00 0.00 0.00 4.45
2838 5147 0.960364 ACAATGCGGTACAAGGCTGG 60.960 55.000 0.00 0.00 0.00 4.85
2839 5148 1.732941 TACAATGCGGTACAAGGCTG 58.267 50.000 0.00 0.00 0.00 4.85
2840 5149 2.288666 CATACAATGCGGTACAAGGCT 58.711 47.619 0.00 0.00 0.00 4.58
2841 5150 2.755836 CATACAATGCGGTACAAGGC 57.244 50.000 0.00 0.00 0.00 4.35
2852 5161 7.539022 AGAGTATCGTTCTTATCGCATACAATG 59.461 37.037 0.00 0.00 42.67 2.82
2853 5162 7.594714 AGAGTATCGTTCTTATCGCATACAAT 58.405 34.615 0.00 0.00 42.67 2.71
2854 5163 6.967135 AGAGTATCGTTCTTATCGCATACAA 58.033 36.000 0.00 0.00 42.67 2.41
2855 5164 6.555812 AGAGTATCGTTCTTATCGCATACA 57.444 37.500 0.00 0.00 42.67 2.29
2856 5165 6.183359 GCAAGAGTATCGTTCTTATCGCATAC 60.183 42.308 0.00 0.00 42.67 2.39
2857 5166 5.856986 GCAAGAGTATCGTTCTTATCGCATA 59.143 40.000 0.00 0.00 42.67 3.14
2858 5167 4.681942 GCAAGAGTATCGTTCTTATCGCAT 59.318 41.667 0.00 0.00 42.67 4.73
2859 5168 4.042398 GCAAGAGTATCGTTCTTATCGCA 58.958 43.478 0.00 0.00 42.67 5.10
2860 5169 3.118157 CGCAAGAGTATCGTTCTTATCGC 59.882 47.826 0.00 0.00 42.67 4.58
2861 5170 3.118157 GCGCAAGAGTATCGTTCTTATCG 59.882 47.826 0.30 0.00 42.67 2.92
2862 5171 4.042398 TGCGCAAGAGTATCGTTCTTATC 58.958 43.478 8.16 0.00 42.67 1.75
2863 5172 4.041740 TGCGCAAGAGTATCGTTCTTAT 57.958 40.909 8.16 0.00 42.67 1.73
2864 5173 3.497297 TGCGCAAGAGTATCGTTCTTA 57.503 42.857 8.16 0.00 42.67 2.10
2865 5174 2.363788 TGCGCAAGAGTATCGTTCTT 57.636 45.000 8.16 0.00 42.67 2.52
2866 5175 2.196749 CATGCGCAAGAGTATCGTTCT 58.803 47.619 17.11 0.00 42.67 3.01
2867 5176 1.927174 ACATGCGCAAGAGTATCGTTC 59.073 47.619 20.91 0.00 42.67 3.95
2868 5177 1.660607 CACATGCGCAAGAGTATCGTT 59.339 47.619 20.91 0.00 42.67 3.85
2869 5178 1.135112 TCACATGCGCAAGAGTATCGT 60.135 47.619 20.91 1.61 42.67 3.73
2870 5179 1.559831 TCACATGCGCAAGAGTATCG 58.440 50.000 20.91 5.20 42.67 2.92
2871 5180 3.060003 GTCATCACATGCGCAAGAGTATC 60.060 47.826 20.91 1.18 43.02 2.24
2872 5181 2.868583 GTCATCACATGCGCAAGAGTAT 59.131 45.455 20.91 6.47 43.02 2.12
2873 5182 2.270923 GTCATCACATGCGCAAGAGTA 58.729 47.619 20.91 4.23 43.02 2.59
2874 5183 1.081892 GTCATCACATGCGCAAGAGT 58.918 50.000 20.91 13.55 43.02 3.24
2875 5184 0.376152 GGTCATCACATGCGCAAGAG 59.624 55.000 20.91 12.06 43.02 2.85
2876 5185 0.321475 TGGTCATCACATGCGCAAGA 60.321 50.000 20.91 15.89 43.02 3.02
2877 5186 0.179181 GTGGTCATCACATGCGCAAG 60.179 55.000 17.11 14.15 45.39 4.01
2878 5187 1.875262 GTGGTCATCACATGCGCAA 59.125 52.632 17.11 0.00 45.39 4.85
2879 5188 3.577229 GTGGTCATCACATGCGCA 58.423 55.556 14.96 14.96 45.39 6.09
2886 5195 0.741221 GGCGGAGAAGTGGTCATCAC 60.741 60.000 0.00 0.00 46.39 3.06
2887 5196 1.191489 TGGCGGAGAAGTGGTCATCA 61.191 55.000 0.00 0.00 0.00 3.07
2888 5197 0.460987 CTGGCGGAGAAGTGGTCATC 60.461 60.000 0.00 0.00 0.00 2.92
2889 5198 0.904865 TCTGGCGGAGAAGTGGTCAT 60.905 55.000 0.00 0.00 0.00 3.06
2890 5199 0.904865 ATCTGGCGGAGAAGTGGTCA 60.905 55.000 1.04 0.00 33.12 4.02
2891 5200 1.112113 TATCTGGCGGAGAAGTGGTC 58.888 55.000 1.04 0.00 33.12 4.02
2892 5201 1.794714 ATATCTGGCGGAGAAGTGGT 58.205 50.000 1.04 0.00 33.12 4.16
2893 5202 3.511540 TGATATATCTGGCGGAGAAGTGG 59.488 47.826 13.79 0.00 33.12 4.00
2894 5203 4.790765 TGATATATCTGGCGGAGAAGTG 57.209 45.455 13.79 0.00 33.12 3.16
2895 5204 6.365970 AAATGATATATCTGGCGGAGAAGT 57.634 37.500 13.79 0.00 33.12 3.01
2896 5205 5.518128 CGAAATGATATATCTGGCGGAGAAG 59.482 44.000 13.79 0.00 33.12 2.85
2897 5206 5.410924 CGAAATGATATATCTGGCGGAGAA 58.589 41.667 13.79 0.00 33.12 2.87
2898 5207 4.142160 CCGAAATGATATATCTGGCGGAGA 60.142 45.833 21.46 0.00 38.57 3.71
2899 5208 4.115516 CCGAAATGATATATCTGGCGGAG 58.884 47.826 21.46 7.28 38.57 4.63
2900 5209 3.767131 TCCGAAATGATATATCTGGCGGA 59.233 43.478 23.13 23.13 42.35 5.54
2901 5210 4.115516 CTCCGAAATGATATATCTGGCGG 58.884 47.826 20.65 20.65 37.70 6.13
2902 5211 4.115516 CCTCCGAAATGATATATCTGGCG 58.884 47.826 13.79 11.17 0.00 5.69
2903 5212 4.162320 TCCCTCCGAAATGATATATCTGGC 59.838 45.833 13.79 0.89 0.00 4.85
2904 5213 5.939764 TCCCTCCGAAATGATATATCTGG 57.060 43.478 13.79 7.89 0.00 3.86
2905 5214 7.281774 CCAAATCCCTCCGAAATGATATATCTG 59.718 40.741 13.79 0.00 0.00 2.90
2906 5215 7.037297 ACCAAATCCCTCCGAAATGATATATCT 60.037 37.037 13.79 0.00 0.00 1.98
2907 5216 7.112779 ACCAAATCCCTCCGAAATGATATATC 58.887 38.462 5.73 5.73 0.00 1.63
2908 5217 7.032598 ACCAAATCCCTCCGAAATGATATAT 57.967 36.000 0.00 0.00 0.00 0.86
2909 5218 6.448369 ACCAAATCCCTCCGAAATGATATA 57.552 37.500 0.00 0.00 0.00 0.86
2910 5219 5.324832 ACCAAATCCCTCCGAAATGATAT 57.675 39.130 0.00 0.00 0.00 1.63
2911 5220 4.788925 ACCAAATCCCTCCGAAATGATA 57.211 40.909 0.00 0.00 0.00 2.15
2912 5221 3.669939 ACCAAATCCCTCCGAAATGAT 57.330 42.857 0.00 0.00 0.00 2.45
2913 5222 3.088532 CAACCAAATCCCTCCGAAATGA 58.911 45.455 0.00 0.00 0.00 2.57
2914 5223 2.166254 CCAACCAAATCCCTCCGAAATG 59.834 50.000 0.00 0.00 0.00 2.32
2915 5224 2.456577 CCAACCAAATCCCTCCGAAAT 58.543 47.619 0.00 0.00 0.00 2.17
2916 5225 1.549037 CCCAACCAAATCCCTCCGAAA 60.549 52.381 0.00 0.00 0.00 3.46
2917 5226 0.039035 CCCAACCAAATCCCTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
2918 5227 0.842905 TCCCAACCAAATCCCTCCGA 60.843 55.000 0.00 0.00 0.00 4.55
2919 5228 0.679960 GTCCCAACCAAATCCCTCCG 60.680 60.000 0.00 0.00 0.00 4.63
2920 5229 0.324368 GGTCCCAACCAAATCCCTCC 60.324 60.000 0.00 0.00 45.68 4.30
2921 5230 3.283020 GGTCCCAACCAAATCCCTC 57.717 57.895 0.00 0.00 45.68 4.30
2930 5239 0.616891 ATACAAGACGGGTCCCAACC 59.383 55.000 9.12 0.00 45.65 3.77
2931 5240 1.276989 TGATACAAGACGGGTCCCAAC 59.723 52.381 9.12 0.58 0.00 3.77
2932 5241 1.646912 TGATACAAGACGGGTCCCAA 58.353 50.000 9.12 0.00 0.00 4.12
2933 5242 1.484653 CATGATACAAGACGGGTCCCA 59.515 52.381 9.12 0.00 0.00 4.37
2934 5243 1.760613 TCATGATACAAGACGGGTCCC 59.239 52.381 0.00 0.00 0.00 4.46
2935 5244 2.167693 TGTCATGATACAAGACGGGTCC 59.832 50.000 0.00 0.00 35.23 4.46
2936 5245 3.520290 TGTCATGATACAAGACGGGTC 57.480 47.619 0.00 0.00 35.23 4.46
2937 5246 3.007506 TGTTGTCATGATACAAGACGGGT 59.992 43.478 10.22 0.00 39.92 5.28
2938 5247 3.595173 TGTTGTCATGATACAAGACGGG 58.405 45.455 10.22 0.00 39.92 5.28
2939 5248 5.111989 AGATGTTGTCATGATACAAGACGG 58.888 41.667 15.00 0.00 39.92 4.79
2940 5249 6.533012 AGAAGATGTTGTCATGATACAAGACG 59.467 38.462 15.00 0.00 39.92 4.18
2941 5250 7.840342 AGAAGATGTTGTCATGATACAAGAC 57.160 36.000 15.00 10.66 39.92 3.01
2942 5251 9.755804 GATAGAAGATGTTGTCATGATACAAGA 57.244 33.333 15.00 8.26 39.92 3.02
2943 5252 8.986847 GGATAGAAGATGTTGTCATGATACAAG 58.013 37.037 15.00 0.00 39.92 3.16
2944 5253 7.933577 GGGATAGAAGATGTTGTCATGATACAA 59.066 37.037 15.00 6.77 37.03 2.41
2945 5254 7.445121 GGGATAGAAGATGTTGTCATGATACA 58.555 38.462 13.82 13.82 34.06 2.29
2946 5255 6.587990 CGGGATAGAAGATGTTGTCATGATAC 59.412 42.308 0.00 1.07 34.06 2.24
2947 5256 6.267699 ACGGGATAGAAGATGTTGTCATGATA 59.732 38.462 0.00 0.00 34.06 2.15
2948 5257 5.070981 ACGGGATAGAAGATGTTGTCATGAT 59.929 40.000 0.00 0.00 34.06 2.45
2949 5258 4.405680 ACGGGATAGAAGATGTTGTCATGA 59.594 41.667 0.00 0.00 34.06 3.07
2950 5259 4.697514 ACGGGATAGAAGATGTTGTCATG 58.302 43.478 0.00 0.00 34.06 3.07
2951 5260 5.359194 AACGGGATAGAAGATGTTGTCAT 57.641 39.130 0.00 0.00 36.95 3.06
2952 5261 4.819105 AACGGGATAGAAGATGTTGTCA 57.181 40.909 0.00 0.00 0.00 3.58
2953 5262 4.332819 CCAAACGGGATAGAAGATGTTGTC 59.667 45.833 0.00 0.00 40.01 3.18
2954 5263 4.019681 TCCAAACGGGATAGAAGATGTTGT 60.020 41.667 0.00 0.00 42.15 3.32
2955 5264 4.513442 TCCAAACGGGATAGAAGATGTTG 58.487 43.478 0.00 0.00 42.15 3.33
2956 5265 4.837093 TCCAAACGGGATAGAAGATGTT 57.163 40.909 0.00 0.00 42.15 2.71
2970 5279 5.788531 GTGTCAAGTTAATCGAATCCAAACG 59.211 40.000 0.00 0.00 0.00 3.60
2972 5281 6.869315 TGTGTCAAGTTAATCGAATCCAAA 57.131 33.333 0.00 0.00 0.00 3.28
2973 5282 6.072728 CCTTGTGTCAAGTTAATCGAATCCAA 60.073 38.462 8.37 0.00 0.00 3.53
2975 5284 5.673818 GCCTTGTGTCAAGTTAATCGAATCC 60.674 44.000 8.37 0.00 0.00 3.01
2977 5286 4.156008 GGCCTTGTGTCAAGTTAATCGAAT 59.844 41.667 0.00 0.00 0.00 3.34
2978 5287 3.500680 GGCCTTGTGTCAAGTTAATCGAA 59.499 43.478 0.00 0.00 0.00 3.71
2979 5288 3.071479 GGCCTTGTGTCAAGTTAATCGA 58.929 45.455 0.00 0.00 0.00 3.59
2981 5290 2.161609 CCGGCCTTGTGTCAAGTTAATC 59.838 50.000 0.00 0.00 0.00 1.75
2982 5291 2.159382 CCGGCCTTGTGTCAAGTTAAT 58.841 47.619 0.00 0.00 0.00 1.40
2984 5293 0.250553 CCCGGCCTTGTGTCAAGTTA 60.251 55.000 0.00 0.00 0.00 2.24
2985 5294 1.528309 CCCGGCCTTGTGTCAAGTT 60.528 57.895 0.00 0.00 0.00 2.66
2986 5295 1.779061 ATCCCGGCCTTGTGTCAAGT 61.779 55.000 0.00 0.00 0.00 3.16
2987 5296 1.002134 ATCCCGGCCTTGTGTCAAG 60.002 57.895 0.00 2.90 0.00 3.02
2988 5297 1.303236 CATCCCGGCCTTGTGTCAA 60.303 57.895 0.00 0.00 0.00 3.18
2991 5300 1.779061 AAGACATCCCGGCCTTGTGT 61.779 55.000 0.00 0.00 0.00 3.72
2992 5301 0.609131 AAAGACATCCCGGCCTTGTG 60.609 55.000 0.00 0.00 0.00 3.33
2993 5302 0.322546 GAAAGACATCCCGGCCTTGT 60.323 55.000 0.00 0.00 0.00 3.16
2994 5303 1.369091 CGAAAGACATCCCGGCCTTG 61.369 60.000 0.00 0.00 0.00 3.61
2995 5304 1.078426 CGAAAGACATCCCGGCCTT 60.078 57.895 0.00 0.00 0.00 4.35
2996 5305 2.584608 CGAAAGACATCCCGGCCT 59.415 61.111 0.00 0.00 0.00 5.19
2998 5307 2.125106 AGCGAAAGACATCCCGGC 60.125 61.111 0.00 0.00 0.00 6.13
2999 5308 1.815421 CCAGCGAAAGACATCCCGG 60.815 63.158 0.00 0.00 0.00 5.73
3000 5309 0.391130 TTCCAGCGAAAGACATCCCG 60.391 55.000 0.00 0.00 0.00 5.14
3001 5310 1.943340 GATTCCAGCGAAAGACATCCC 59.057 52.381 0.00 0.00 0.00 3.85
3003 5312 5.112686 AGTAAGATTCCAGCGAAAGACATC 58.887 41.667 0.00 0.00 0.00 3.06
3004 5313 5.091261 AGTAAGATTCCAGCGAAAGACAT 57.909 39.130 0.00 0.00 0.00 3.06
3005 5314 4.537135 AGTAAGATTCCAGCGAAAGACA 57.463 40.909 0.00 0.00 0.00 3.41
3006 5315 5.408356 TGTAGTAAGATTCCAGCGAAAGAC 58.592 41.667 0.00 0.00 0.00 3.01
3007 5316 5.654603 TGTAGTAAGATTCCAGCGAAAGA 57.345 39.130 0.00 0.00 0.00 2.52
3008 5317 6.910536 AATGTAGTAAGATTCCAGCGAAAG 57.089 37.500 0.00 0.00 0.00 2.62
3009 5318 6.876789 TCAAATGTAGTAAGATTCCAGCGAAA 59.123 34.615 0.00 0.00 0.00 3.46
3010 5319 6.403049 TCAAATGTAGTAAGATTCCAGCGAA 58.597 36.000 0.00 0.00 0.00 4.70
3011 5320 5.972935 TCAAATGTAGTAAGATTCCAGCGA 58.027 37.500 0.00 0.00 0.00 4.93
3012 5321 6.238211 CCTTCAAATGTAGTAAGATTCCAGCG 60.238 42.308 0.00 0.00 0.00 5.18
3013 5322 6.599638 ACCTTCAAATGTAGTAAGATTCCAGC 59.400 38.462 0.00 0.00 0.00 4.85
3014 5323 8.567285 AACCTTCAAATGTAGTAAGATTCCAG 57.433 34.615 0.00 0.00 0.00 3.86
3015 5324 8.934023 AAACCTTCAAATGTAGTAAGATTCCA 57.066 30.769 0.00 0.00 0.00 3.53
3016 5325 9.841880 GAAAACCTTCAAATGTAGTAAGATTCC 57.158 33.333 0.00 0.00 0.00 3.01
3024 5333 9.574516 AGTCTAATGAAAACCTTCAAATGTAGT 57.425 29.630 0.00 0.00 44.64 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.