Multiple sequence alignment - TraesCS3A01G112900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G112900 chr3A 100.000 2495 0 0 1 2495 80224823 80227317 0.000000e+00 4608.0
1 TraesCS3A01G112900 chr3A 100.000 63 0 0 2117 2179 80226876 80226938 1.570000e-22 117.0
2 TraesCS3A01G112900 chr3A 100.000 63 0 0 2054 2116 80226939 80227001 1.570000e-22 117.0
3 TraesCS3A01G112900 chr3D 88.518 1289 70 31 736 2016 68273563 68274781 0.000000e+00 1489.0
4 TraesCS3A01G112900 chr3D 90.100 1000 57 17 739 1736 68170027 68170986 0.000000e+00 1260.0
5 TraesCS3A01G112900 chr3D 92.714 700 37 5 1 692 68169210 68169903 0.000000e+00 998.0
6 TraesCS3A01G112900 chr3D 94.664 506 21 2 992 1497 68325588 68325089 0.000000e+00 780.0
7 TraesCS3A01G112900 chr3D 90.572 297 26 1 2198 2494 603651005 603651299 2.330000e-105 392.0
8 TraesCS3A01G112900 chr3D 92.537 201 14 1 548 748 68273330 68273529 1.130000e-73 287.0
9 TraesCS3A01G112900 chr3D 94.048 168 7 2 1793 1957 68171003 68171170 4.120000e-63 252.0
10 TraesCS3A01G112900 chr3D 100.000 33 0 0 1750 1782 43735663 43735631 7.450000e-06 62.1
11 TraesCS3A01G112900 chr3B 90.501 979 53 18 759 1736 113512784 113511845 0.000000e+00 1256.0
12 TraesCS3A01G112900 chr3B 94.423 520 21 4 980 1497 113503706 113504219 0.000000e+00 793.0
13 TraesCS3A01G112900 chr3B 91.289 574 39 4 1 565 113515365 113514794 0.000000e+00 773.0
14 TraesCS3A01G112900 chr3B 90.566 583 38 8 923 1504 112465699 112465133 0.000000e+00 756.0
15 TraesCS3A01G112900 chr3B 90.588 170 14 1 1793 1960 113511828 113511659 8.980000e-55 224.0
16 TraesCS3A01G112900 chr7B 86.890 717 49 22 782 1497 603657070 603657742 0.000000e+00 761.0
17 TraesCS3A01G112900 chr4D 93.117 523 28 3 980 1501 134563267 134563782 0.000000e+00 760.0
18 TraesCS3A01G112900 chr4D 88.095 630 51 15 880 1507 134550477 134549870 0.000000e+00 726.0
19 TraesCS3A01G112900 chr4D 90.301 299 24 3 2198 2494 3467326 3467031 1.080000e-103 387.0
20 TraesCS3A01G112900 chr4D 90.268 298 26 2 2198 2494 429460379 429460674 1.080000e-103 387.0
21 TraesCS3A01G112900 chr4D 92.262 168 7 4 1851 2016 134626582 134626419 1.490000e-57 233.0
22 TraesCS3A01G112900 chr5A 90.667 300 22 4 2198 2495 324300086 324300381 6.470000e-106 394.0
23 TraesCS3A01G112900 chr5A 90.667 300 23 3 2198 2495 355927363 355927659 6.470000e-106 394.0
24 TraesCS3A01G112900 chr5A 90.397 302 24 3 2196 2495 621175582 621175284 2.330000e-105 392.0
25 TraesCS3A01G112900 chr7D 90.301 299 25 3 2198 2494 254305908 254306204 3.010000e-104 388.0
26 TraesCS3A01G112900 chr7D 100.000 33 0 0 1748 1780 227621038 227621006 7.450000e-06 62.1
27 TraesCS3A01G112900 chr7D 100.000 33 0 0 1748 1780 426686102 426686134 7.450000e-06 62.1
28 TraesCS3A01G112900 chr6D 90.333 300 24 3 2198 2495 89566549 89566845 3.010000e-104 388.0
29 TraesCS3A01G112900 chr2D 90.333 300 24 3 2198 2494 425997639 425997936 3.010000e-104 388.0
30 TraesCS3A01G112900 chr7A 100.000 33 0 0 1748 1780 40876636 40876668 7.450000e-06 62.1
31 TraesCS3A01G112900 chr6A 100.000 33 0 0 1748 1780 11165068 11165100 7.450000e-06 62.1
32 TraesCS3A01G112900 chr2A 100.000 33 0 0 1748 1780 109323387 109323419 7.450000e-06 62.1
33 TraesCS3A01G112900 chr1D 100.000 33 0 0 1748 1780 80270501 80270533 7.450000e-06 62.1
34 TraesCS3A01G112900 chr5D 94.595 37 2 0 1744 1780 507553625 507553661 9.640000e-05 58.4
35 TraesCS3A01G112900 chr4A 92.500 40 2 1 1748 1787 737233363 737233325 3.470000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G112900 chr3A 80224823 80227317 2494 False 1614.000000 4608 100.000000 1 2495 3 chr3A.!!$F1 2494
1 TraesCS3A01G112900 chr3D 68273330 68274781 1451 False 888.000000 1489 90.527500 548 2016 2 chr3D.!!$F3 1468
2 TraesCS3A01G112900 chr3D 68169210 68171170 1960 False 836.666667 1260 92.287333 1 1957 3 chr3D.!!$F2 1956
3 TraesCS3A01G112900 chr3B 113503706 113504219 513 False 793.000000 793 94.423000 980 1497 1 chr3B.!!$F1 517
4 TraesCS3A01G112900 chr3B 112465133 112465699 566 True 756.000000 756 90.566000 923 1504 1 chr3B.!!$R1 581
5 TraesCS3A01G112900 chr3B 113511659 113515365 3706 True 751.000000 1256 90.792667 1 1960 3 chr3B.!!$R2 1959
6 TraesCS3A01G112900 chr7B 603657070 603657742 672 False 761.000000 761 86.890000 782 1497 1 chr7B.!!$F1 715
7 TraesCS3A01G112900 chr4D 134563267 134563782 515 False 760.000000 760 93.117000 980 1501 1 chr4D.!!$F1 521
8 TraesCS3A01G112900 chr4D 134549870 134550477 607 True 726.000000 726 88.095000 880 1507 1 chr4D.!!$R2 627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
885 2782 0.032416 TAAACTCCCTCCTCCTCCCG 60.032 60.0 0.0 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2389 4326 0.025898 CTGAATGTGTGCAGATCGCG 59.974 55.0 0.0 0.0 46.97 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.609555 GAGTCACACTGTCGAGAAGGT 59.390 52.381 0.00 0.00 0.00 3.50
27 28 1.337071 GTCACACTGTCGAGAAGGTCA 59.663 52.381 0.00 0.00 0.00 4.02
40 41 3.047877 GGTCACCAAAGGTCGCCG 61.048 66.667 0.00 0.00 31.02 6.46
102 103 1.900351 CCAGCCATCTTCGTCCAGA 59.100 57.895 0.00 0.00 0.00 3.86
177 178 3.710722 AAGCCGGTGAGAGCTGGG 61.711 66.667 1.90 0.00 39.87 4.45
282 283 1.003839 TAAGCTGAGCGTGGTTGGG 60.004 57.895 2.40 0.00 0.00 4.12
327 328 2.719979 GCGCAGGCTTCATGATGG 59.280 61.111 0.30 1.75 35.83 3.51
328 329 2.117156 GCGCAGGCTTCATGATGGT 61.117 57.895 0.30 0.00 35.83 3.55
329 330 2.020131 CGCAGGCTTCATGATGGTC 58.980 57.895 10.35 2.12 0.00 4.02
330 331 1.769098 CGCAGGCTTCATGATGGTCG 61.769 60.000 10.35 0.46 0.00 4.79
331 332 0.462581 GCAGGCTTCATGATGGTCGA 60.463 55.000 10.35 0.00 0.00 4.20
332 333 1.813092 GCAGGCTTCATGATGGTCGAT 60.813 52.381 10.35 0.00 0.00 3.59
379 384 7.390718 ACCTGTAAATATCAGTGACTTGGTTTC 59.609 37.037 0.00 0.00 0.00 2.78
418 423 7.653713 TGCTTTTCGGCTTACAATTTTGATAAA 59.346 29.630 0.00 0.00 0.00 1.40
464 469 1.412710 TGAGATCTTACCACGGCATCC 59.587 52.381 0.00 0.00 0.00 3.51
589 600 4.123497 TGAGGTGACTGACATTTATCCG 57.877 45.455 0.00 0.00 44.43 4.18
601 612 5.411361 TGACATTTATCCGAGTTTGTTCCTG 59.589 40.000 0.00 0.00 0.00 3.86
755 2634 2.996621 CTGCTCCTAAAGAAAGACCGTG 59.003 50.000 0.00 0.00 0.00 4.94
756 2635 2.631062 TGCTCCTAAAGAAAGACCGTGA 59.369 45.455 0.00 0.00 0.00 4.35
757 2636 3.260884 TGCTCCTAAAGAAAGACCGTGAT 59.739 43.478 0.00 0.00 0.00 3.06
837 2729 0.460284 CCGTCACCTTCCAGAATCCG 60.460 60.000 0.00 0.00 0.00 4.18
884 2781 2.498473 ATAAACTCCCTCCTCCTCCC 57.502 55.000 0.00 0.00 0.00 4.30
885 2782 0.032416 TAAACTCCCTCCTCCTCCCG 60.032 60.000 0.00 0.00 0.00 5.14
886 2783 2.108208 AAACTCCCTCCTCCTCCCGT 62.108 60.000 0.00 0.00 0.00 5.28
1501 3413 3.215245 AGGTCGCCTGAGAGATGC 58.785 61.111 0.00 0.00 29.57 3.91
1563 3476 4.207281 CCGGATCGAAGCTGCCGA 62.207 66.667 12.87 12.87 46.29 5.54
1565 3478 2.496817 GGATCGAAGCTGCCGAGT 59.503 61.111 15.20 5.80 39.55 4.18
1566 3479 1.880340 GGATCGAAGCTGCCGAGTG 60.880 63.158 15.20 0.00 39.55 3.51
1567 3480 1.880340 GATCGAAGCTGCCGAGTGG 60.880 63.158 15.20 0.00 39.55 4.00
1568 3481 3.376935 ATCGAAGCTGCCGAGTGGG 62.377 63.158 15.20 0.00 39.55 4.61
1569 3482 4.379243 CGAAGCTGCCGAGTGGGT 62.379 66.667 2.94 0.00 38.44 4.51
1570 3483 2.978824 GAAGCTGCCGAGTGGGTA 59.021 61.111 0.00 0.00 38.44 3.69
1574 3487 3.694746 CTGCCGAGTGGGTAGTGA 58.305 61.111 0.88 0.00 43.04 3.41
1575 3488 1.972198 CTGCCGAGTGGGTAGTGAA 59.028 57.895 0.88 0.00 43.04 3.18
1576 3489 0.389948 CTGCCGAGTGGGTAGTGAAC 60.390 60.000 0.88 0.00 43.04 3.18
1589 3502 4.291783 GGTAGTGAACTAGTGATCGATGC 58.708 47.826 0.54 0.00 0.00 3.91
1625 3538 1.134877 CCTGAGATGCGTGATGTGTCT 60.135 52.381 0.00 0.00 0.00 3.41
1626 3539 2.614779 CTGAGATGCGTGATGTGTCTT 58.385 47.619 0.00 0.00 0.00 3.01
1627 3540 2.340337 TGAGATGCGTGATGTGTCTTG 58.660 47.619 0.00 0.00 0.00 3.02
1657 3570 4.207955 TCTATCTCTGCTCGTATGGTGTT 58.792 43.478 0.00 0.00 0.00 3.32
1694 3607 3.202906 ACTAGTTTTCGCTTTCAGTGCA 58.797 40.909 0.00 0.00 0.00 4.57
1744 3678 8.871686 ATCATCAACTTTGTTTCAAACTTACC 57.128 30.769 1.10 0.00 0.00 2.85
1745 3679 7.831753 TCATCAACTTTGTTTCAAACTTACCA 58.168 30.769 1.10 0.00 0.00 3.25
1746 3680 7.973388 TCATCAACTTTGTTTCAAACTTACCAG 59.027 33.333 1.10 0.00 0.00 4.00
1747 3681 6.096695 TCAACTTTGTTTCAAACTTACCAGC 58.903 36.000 1.10 0.00 0.00 4.85
1748 3682 5.914898 ACTTTGTTTCAAACTTACCAGCT 57.085 34.783 1.10 0.00 0.00 4.24
1749 3683 5.891451 ACTTTGTTTCAAACTTACCAGCTC 58.109 37.500 1.10 0.00 0.00 4.09
1750 3684 5.417580 ACTTTGTTTCAAACTTACCAGCTCA 59.582 36.000 1.10 0.00 0.00 4.26
1751 3685 5.906113 TTGTTTCAAACTTACCAGCTCAA 57.094 34.783 1.10 0.00 0.00 3.02
1752 3686 5.906113 TGTTTCAAACTTACCAGCTCAAA 57.094 34.783 1.10 0.00 0.00 2.69
1753 3687 6.274157 TGTTTCAAACTTACCAGCTCAAAA 57.726 33.333 1.10 0.00 0.00 2.44
1754 3688 6.872920 TGTTTCAAACTTACCAGCTCAAAAT 58.127 32.000 1.10 0.00 0.00 1.82
1755 3689 8.001881 TGTTTCAAACTTACCAGCTCAAAATA 57.998 30.769 1.10 0.00 0.00 1.40
1756 3690 8.470805 TGTTTCAAACTTACCAGCTCAAAATAA 58.529 29.630 1.10 0.00 0.00 1.40
1757 3691 8.968242 GTTTCAAACTTACCAGCTCAAAATAAG 58.032 33.333 0.00 0.00 0.00 1.73
1758 3692 7.817418 TCAAACTTACCAGCTCAAAATAAGT 57.183 32.000 0.00 0.00 37.62 2.24
1759 3693 7.648142 TCAAACTTACCAGCTCAAAATAAGTG 58.352 34.615 0.00 0.00 36.47 3.16
1760 3694 7.500892 TCAAACTTACCAGCTCAAAATAAGTGA 59.499 33.333 0.00 0.00 36.47 3.41
1761 3695 6.803154 ACTTACCAGCTCAAAATAAGTGAC 57.197 37.500 0.00 0.00 35.34 3.67
1762 3696 6.534634 ACTTACCAGCTCAAAATAAGTGACT 58.465 36.000 0.00 0.00 35.34 3.41
1763 3697 6.651225 ACTTACCAGCTCAAAATAAGTGACTC 59.349 38.462 0.00 0.00 35.34 3.36
1764 3698 4.973168 ACCAGCTCAAAATAAGTGACTCA 58.027 39.130 0.00 0.00 0.00 3.41
1765 3699 5.376625 ACCAGCTCAAAATAAGTGACTCAA 58.623 37.500 0.00 0.00 0.00 3.02
1766 3700 5.471456 ACCAGCTCAAAATAAGTGACTCAAG 59.529 40.000 0.00 0.00 0.00 3.02
1767 3701 5.471456 CCAGCTCAAAATAAGTGACTCAAGT 59.529 40.000 0.00 0.00 0.00 3.16
1768 3702 6.016777 CCAGCTCAAAATAAGTGACTCAAGTT 60.017 38.462 0.00 0.00 0.00 2.66
1769 3703 7.420800 CAGCTCAAAATAAGTGACTCAAGTTT 58.579 34.615 0.00 0.00 0.00 2.66
1770 3704 7.377928 CAGCTCAAAATAAGTGACTCAAGTTTG 59.622 37.037 11.98 11.98 0.00 2.93
1771 3705 7.067494 AGCTCAAAATAAGTGACTCAAGTTTGT 59.933 33.333 15.56 1.17 0.00 2.83
1772 3706 8.342634 GCTCAAAATAAGTGACTCAAGTTTGTA 58.657 33.333 15.56 6.70 0.00 2.41
1773 3707 9.651718 CTCAAAATAAGTGACTCAAGTTTGTAC 57.348 33.333 15.56 0.00 0.00 2.90
1774 3708 9.391006 TCAAAATAAGTGACTCAAGTTTGTACT 57.609 29.630 15.56 0.00 35.68 2.73
1790 3724 7.783042 AGTTTGTACTAACTTGAAGTGTCTCT 58.217 34.615 15.68 0.00 34.81 3.10
1791 3725 8.258708 AGTTTGTACTAACTTGAAGTGTCTCTT 58.741 33.333 15.68 0.00 34.81 2.85
1801 3735 6.712547 ACTTGAAGTGTCTCTTTAATCTTGGG 59.287 38.462 0.00 0.00 36.40 4.12
1804 3738 3.916989 AGTGTCTCTTTAATCTTGGGGGT 59.083 43.478 0.00 0.00 0.00 4.95
1919 3856 5.218139 CCTGTCTGAAATGAAAAACAGAGC 58.782 41.667 0.00 0.00 39.52 4.09
1966 3903 0.178975 TTCGCCCATGGTTGAAAGGT 60.179 50.000 11.73 0.00 0.00 3.50
1967 3904 0.893270 TCGCCCATGGTTGAAAGGTG 60.893 55.000 11.73 0.00 0.00 4.00
1968 3905 1.178534 CGCCCATGGTTGAAAGGTGT 61.179 55.000 11.73 0.00 0.00 4.16
1969 3906 0.603065 GCCCATGGTTGAAAGGTGTC 59.397 55.000 11.73 0.00 0.00 3.67
1991 3928 6.127952 TGTCTGTTTGTGGTGGTTTTTACTAC 60.128 38.462 0.00 0.00 0.00 2.73
2034 3971 9.796180 TTAGAGTAGAAGATAGATTGGTACTCC 57.204 37.037 0.00 0.00 36.93 3.85
2035 3972 7.235804 AGAGTAGAAGATAGATTGGTACTCCC 58.764 42.308 0.00 0.00 36.93 4.30
2036 3973 7.074494 AGAGTAGAAGATAGATTGGTACTCCCT 59.926 40.741 0.00 0.00 36.93 4.20
2037 3974 7.235804 AGTAGAAGATAGATTGGTACTCCCTC 58.764 42.308 0.00 0.00 0.00 4.30
2038 3975 5.399113 AGAAGATAGATTGGTACTCCCTCC 58.601 45.833 0.00 0.00 0.00 4.30
2039 3976 3.768878 AGATAGATTGGTACTCCCTCCG 58.231 50.000 0.00 0.00 0.00 4.63
2040 3977 3.140519 AGATAGATTGGTACTCCCTCCGT 59.859 47.826 0.00 0.00 0.00 4.69
2041 3978 1.777941 AGATTGGTACTCCCTCCGTC 58.222 55.000 0.00 0.00 0.00 4.79
2042 3979 1.288335 AGATTGGTACTCCCTCCGTCT 59.712 52.381 0.00 0.00 0.00 4.18
2043 3980 1.682323 GATTGGTACTCCCTCCGTCTC 59.318 57.143 0.00 0.00 0.00 3.36
2044 3981 0.406750 TTGGTACTCCCTCCGTCTCA 59.593 55.000 0.00 0.00 0.00 3.27
2045 3982 0.629596 TGGTACTCCCTCCGTCTCAT 59.370 55.000 0.00 0.00 0.00 2.90
2046 3983 1.848388 TGGTACTCCCTCCGTCTCATA 59.152 52.381 0.00 0.00 0.00 2.15
2047 3984 2.228925 GGTACTCCCTCCGTCTCATAC 58.771 57.143 0.00 0.00 0.00 2.39
2048 3985 2.158638 GGTACTCCCTCCGTCTCATACT 60.159 54.545 0.00 0.00 0.00 2.12
2049 3986 2.060050 ACTCCCTCCGTCTCATACTG 57.940 55.000 0.00 0.00 0.00 2.74
2050 3987 1.285373 ACTCCCTCCGTCTCATACTGT 59.715 52.381 0.00 0.00 0.00 3.55
2051 3988 2.508716 ACTCCCTCCGTCTCATACTGTA 59.491 50.000 0.00 0.00 0.00 2.74
2052 3989 3.053842 ACTCCCTCCGTCTCATACTGTAA 60.054 47.826 0.00 0.00 0.00 2.41
2053 3990 3.952323 CTCCCTCCGTCTCATACTGTAAA 59.048 47.826 0.00 0.00 0.00 2.01
2054 3991 4.346730 TCCCTCCGTCTCATACTGTAAAA 58.653 43.478 0.00 0.00 0.00 1.52
2055 3992 4.960469 TCCCTCCGTCTCATACTGTAAAAT 59.040 41.667 0.00 0.00 0.00 1.82
2056 3993 5.050490 CCCTCCGTCTCATACTGTAAAATG 58.950 45.833 0.00 0.00 0.00 2.32
2057 3994 5.395324 CCCTCCGTCTCATACTGTAAAATGT 60.395 44.000 0.00 0.00 0.00 2.71
2058 3995 6.106673 CCTCCGTCTCATACTGTAAAATGTT 58.893 40.000 0.00 0.00 0.00 2.71
2059 3996 6.594159 CCTCCGTCTCATACTGTAAAATGTTT 59.406 38.462 0.00 0.00 0.00 2.83
2060 3997 7.119262 CCTCCGTCTCATACTGTAAAATGTTTT 59.881 37.037 0.00 0.00 0.00 2.43
2061 3998 8.385898 TCCGTCTCATACTGTAAAATGTTTTT 57.614 30.769 0.00 0.00 0.00 1.94
2062 3999 8.286800 TCCGTCTCATACTGTAAAATGTTTTTG 58.713 33.333 0.00 0.00 0.00 2.44
2063 4000 8.286800 CCGTCTCATACTGTAAAATGTTTTTGA 58.713 33.333 0.00 0.00 0.00 2.69
2064 4001 9.103048 CGTCTCATACTGTAAAATGTTTTTGAC 57.897 33.333 0.00 0.00 0.00 3.18
2065 4002 9.944663 GTCTCATACTGTAAAATGTTTTTGACA 57.055 29.630 0.00 0.00 43.71 3.58
2066 4003 9.944663 TCTCATACTGTAAAATGTTTTTGACAC 57.055 29.630 0.00 0.00 42.04 3.67
2067 4004 9.950680 CTCATACTGTAAAATGTTTTTGACACT 57.049 29.630 0.00 0.00 42.04 3.55
2086 4023 9.811995 TTGACACTAGATAATTAAGCATTACGT 57.188 29.630 0.00 0.00 29.65 3.57
2087 4024 9.811995 TGACACTAGATAATTAAGCATTACGTT 57.188 29.630 0.00 0.00 29.65 3.99
2102 4039 9.680315 AAGCATTACGTTTATACATACTCTCTC 57.320 33.333 0.00 0.00 0.00 3.20
2103 4040 8.847196 AGCATTACGTTTATACATACTCTCTCA 58.153 33.333 0.00 0.00 0.00 3.27
2104 4041 9.119329 GCATTACGTTTATACATACTCTCTCAG 57.881 37.037 0.00 0.00 0.00 3.35
2109 4046 8.737175 ACGTTTATACATACTCTCTCAGTTTCA 58.263 33.333 0.00 0.00 36.43 2.69
2110 4047 9.227490 CGTTTATACATACTCTCTCAGTTTCAG 57.773 37.037 0.00 0.00 36.43 3.02
2111 4048 9.026074 GTTTATACATACTCTCTCAGTTTCAGC 57.974 37.037 0.00 0.00 36.43 4.26
2112 4049 4.103365 ACATACTCTCTCAGTTTCAGCG 57.897 45.455 0.00 0.00 36.43 5.18
2113 4050 3.508012 ACATACTCTCTCAGTTTCAGCGT 59.492 43.478 0.00 0.00 36.43 5.07
2114 4051 2.715737 ACTCTCTCAGTTTCAGCGTC 57.284 50.000 0.00 0.00 26.56 5.19
2115 4052 1.271102 ACTCTCTCAGTTTCAGCGTCC 59.729 52.381 0.00 0.00 26.56 4.79
2116 4053 1.270826 CTCTCTCAGTTTCAGCGTCCA 59.729 52.381 0.00 0.00 0.00 4.02
2117 4054 1.686587 TCTCTCAGTTTCAGCGTCCAA 59.313 47.619 0.00 0.00 0.00 3.53
2118 4055 2.300152 TCTCTCAGTTTCAGCGTCCAAT 59.700 45.455 0.00 0.00 0.00 3.16
2119 4056 2.414481 CTCTCAGTTTCAGCGTCCAATG 59.586 50.000 0.00 0.00 0.00 2.82
2120 4057 2.146342 CTCAGTTTCAGCGTCCAATGT 58.854 47.619 0.00 0.00 0.00 2.71
2121 4058 2.549754 CTCAGTTTCAGCGTCCAATGTT 59.450 45.455 0.00 0.00 0.00 2.71
2122 4059 2.948979 TCAGTTTCAGCGTCCAATGTTT 59.051 40.909 0.00 0.00 0.00 2.83
2123 4060 3.380004 TCAGTTTCAGCGTCCAATGTTTT 59.620 39.130 0.00 0.00 0.00 2.43
2124 4061 4.111916 CAGTTTCAGCGTCCAATGTTTTT 58.888 39.130 0.00 0.00 0.00 1.94
2125 4062 4.026640 CAGTTTCAGCGTCCAATGTTTTTG 60.027 41.667 0.00 0.00 0.00 2.44
2126 4063 4.109050 GTTTCAGCGTCCAATGTTTTTGA 58.891 39.130 0.00 0.00 0.00 2.69
2127 4064 3.347958 TCAGCGTCCAATGTTTTTGAC 57.652 42.857 0.00 0.00 0.00 3.18
2128 4065 2.685388 TCAGCGTCCAATGTTTTTGACA 59.315 40.909 0.00 0.00 43.71 3.58
2129 4066 2.788786 CAGCGTCCAATGTTTTTGACAC 59.211 45.455 0.00 0.00 42.04 3.67
2130 4067 2.687935 AGCGTCCAATGTTTTTGACACT 59.312 40.909 0.00 0.00 42.04 3.55
2131 4068 3.880490 AGCGTCCAATGTTTTTGACACTA 59.120 39.130 0.00 0.00 42.04 2.74
2132 4069 4.024048 AGCGTCCAATGTTTTTGACACTAG 60.024 41.667 0.00 0.00 42.04 2.57
2133 4070 4.024387 GCGTCCAATGTTTTTGACACTAGA 60.024 41.667 0.00 0.00 42.04 2.43
2134 4071 5.334879 GCGTCCAATGTTTTTGACACTAGAT 60.335 40.000 0.00 0.00 42.04 1.98
2135 4072 6.128391 GCGTCCAATGTTTTTGACACTAGATA 60.128 38.462 0.00 0.00 42.04 1.98
2136 4073 7.572353 GCGTCCAATGTTTTTGACACTAGATAA 60.572 37.037 0.00 0.00 42.04 1.75
2137 4074 8.450964 CGTCCAATGTTTTTGACACTAGATAAT 58.549 33.333 0.00 0.00 42.04 1.28
2149 4086 9.811995 TTGACACTAGATAATTAAGCATTACGT 57.188 29.630 0.00 0.00 29.65 3.57
2150 4087 9.811995 TGACACTAGATAATTAAGCATTACGTT 57.188 29.630 0.00 0.00 29.65 3.99
2165 4102 9.680315 AAGCATTACGTTTATACATACTCTCTC 57.320 33.333 0.00 0.00 0.00 3.20
2166 4103 8.847196 AGCATTACGTTTATACATACTCTCTCA 58.153 33.333 0.00 0.00 0.00 3.27
2167 4104 9.119329 GCATTACGTTTATACATACTCTCTCAG 57.881 37.037 0.00 0.00 0.00 3.35
2172 4109 8.737175 ACGTTTATACATACTCTCTCAGTTTCA 58.263 33.333 0.00 0.00 36.43 2.69
2173 4110 9.227490 CGTTTATACATACTCTCTCAGTTTCAG 57.773 37.037 0.00 0.00 36.43 3.02
2174 4111 9.026074 GTTTATACATACTCTCTCAGTTTCAGC 57.974 37.037 0.00 0.00 36.43 4.26
2175 4112 4.103365 ACATACTCTCTCAGTTTCAGCG 57.897 45.455 0.00 0.00 36.43 5.18
2176 4113 3.508012 ACATACTCTCTCAGTTTCAGCGT 59.492 43.478 0.00 0.00 36.43 5.07
2177 4114 2.715737 ACTCTCTCAGTTTCAGCGTC 57.284 50.000 0.00 0.00 26.56 5.19
2178 4115 1.271102 ACTCTCTCAGTTTCAGCGTCC 59.729 52.381 0.00 0.00 26.56 4.79
2179 4116 0.603569 TCTCTCAGTTTCAGCGTCCC 59.396 55.000 0.00 0.00 0.00 4.46
2180 4117 0.318441 CTCTCAGTTTCAGCGTCCCA 59.682 55.000 0.00 0.00 0.00 4.37
2181 4118 0.756294 TCTCAGTTTCAGCGTCCCAA 59.244 50.000 0.00 0.00 0.00 4.12
2182 4119 1.140052 TCTCAGTTTCAGCGTCCCAAA 59.860 47.619 0.00 0.00 0.00 3.28
2183 4120 1.946768 CTCAGTTTCAGCGTCCCAAAA 59.053 47.619 0.00 0.00 0.00 2.44
2184 4121 2.554032 CTCAGTTTCAGCGTCCCAAAAT 59.446 45.455 0.00 0.00 0.00 1.82
2185 4122 2.955660 TCAGTTTCAGCGTCCCAAAATT 59.044 40.909 0.00 0.00 0.00 1.82
2186 4123 3.004315 TCAGTTTCAGCGTCCCAAAATTC 59.996 43.478 0.00 0.00 0.00 2.17
2187 4124 3.004734 CAGTTTCAGCGTCCCAAAATTCT 59.995 43.478 0.00 0.00 0.00 2.40
2188 4125 3.253432 AGTTTCAGCGTCCCAAAATTCTC 59.747 43.478 0.00 0.00 0.00 2.87
2189 4126 2.859165 TCAGCGTCCCAAAATTCTCT 57.141 45.000 0.00 0.00 0.00 3.10
2190 4127 3.140325 TCAGCGTCCCAAAATTCTCTT 57.860 42.857 0.00 0.00 0.00 2.85
2191 4128 3.486383 TCAGCGTCCCAAAATTCTCTTT 58.514 40.909 0.00 0.00 0.00 2.52
2192 4129 3.253188 TCAGCGTCCCAAAATTCTCTTTG 59.747 43.478 0.00 0.00 36.28 2.77
2193 4130 3.253188 CAGCGTCCCAAAATTCTCTTTGA 59.747 43.478 0.00 0.00 38.35 2.69
2194 4131 3.253432 AGCGTCCCAAAATTCTCTTTGAC 59.747 43.478 0.00 0.00 38.35 3.18
2195 4132 3.253432 GCGTCCCAAAATTCTCTTTGACT 59.747 43.478 0.00 0.00 38.35 3.41
2196 4133 4.454504 GCGTCCCAAAATTCTCTTTGACTA 59.545 41.667 0.00 0.00 38.35 2.59
2197 4134 5.123979 GCGTCCCAAAATTCTCTTTGACTAT 59.876 40.000 0.00 0.00 38.35 2.12
2198 4135 6.546395 CGTCCCAAAATTCTCTTTGACTATG 58.454 40.000 0.00 0.00 38.35 2.23
2199 4136 6.149474 CGTCCCAAAATTCTCTTTGACTATGT 59.851 38.462 0.00 0.00 38.35 2.29
2200 4137 7.308589 CGTCCCAAAATTCTCTTTGACTATGTT 60.309 37.037 0.00 0.00 38.35 2.71
2201 4138 7.809806 GTCCCAAAATTCTCTTTGACTATGTTG 59.190 37.037 0.00 0.00 38.35 3.33
2202 4139 7.039784 TCCCAAAATTCTCTTTGACTATGTTGG 60.040 37.037 0.00 0.00 38.35 3.77
2203 4140 7.092716 CCAAAATTCTCTTTGACTATGTTGGG 58.907 38.462 0.00 0.00 38.35 4.12
2204 4141 6.840780 AAATTCTCTTTGACTATGTTGGGG 57.159 37.500 0.00 0.00 0.00 4.96
2205 4142 5.779241 ATTCTCTTTGACTATGTTGGGGA 57.221 39.130 0.00 0.00 0.00 4.81
2206 4143 5.576563 TTCTCTTTGACTATGTTGGGGAA 57.423 39.130 0.00 0.00 0.00 3.97
2207 4144 5.779241 TCTCTTTGACTATGTTGGGGAAT 57.221 39.130 0.00 0.00 0.00 3.01
2208 4145 5.745227 TCTCTTTGACTATGTTGGGGAATC 58.255 41.667 0.00 0.00 0.00 2.52
2209 4146 4.855340 TCTTTGACTATGTTGGGGAATCC 58.145 43.478 0.00 0.00 0.00 3.01
2210 4147 4.290985 TCTTTGACTATGTTGGGGAATCCA 59.709 41.667 0.09 0.00 45.43 3.41
2244 4181 5.694674 AAAAATTTACGCACACACACAAG 57.305 34.783 0.00 0.00 0.00 3.16
2245 4182 4.624336 AAATTTACGCACACACACAAGA 57.376 36.364 0.00 0.00 0.00 3.02
2246 4183 4.829064 AATTTACGCACACACACAAGAT 57.171 36.364 0.00 0.00 0.00 2.40
2247 4184 3.870723 TTTACGCACACACACAAGATC 57.129 42.857 0.00 0.00 0.00 2.75
2248 4185 2.517650 TACGCACACACACAAGATCA 57.482 45.000 0.00 0.00 0.00 2.92
2249 4186 1.882912 ACGCACACACACAAGATCAT 58.117 45.000 0.00 0.00 0.00 2.45
2250 4187 1.532437 ACGCACACACACAAGATCATG 59.468 47.619 0.00 0.00 0.00 3.07
2251 4188 1.135888 CGCACACACACAAGATCATGG 60.136 52.381 2.59 0.00 0.00 3.66
2252 4189 1.881973 GCACACACACAAGATCATGGT 59.118 47.619 2.59 0.00 0.00 3.55
2253 4190 2.351060 GCACACACACAAGATCATGGTG 60.351 50.000 14.17 14.17 38.47 4.17
2254 4191 3.140623 CACACACACAAGATCATGGTGA 58.859 45.455 19.56 0.00 36.42 4.02
2255 4192 3.754850 CACACACACAAGATCATGGTGAT 59.245 43.478 19.56 9.32 40.34 3.06
2256 4193 3.754850 ACACACACAAGATCATGGTGATG 59.245 43.478 19.56 16.21 37.20 3.07
2257 4194 3.754850 CACACACAAGATCATGGTGATGT 59.245 43.478 19.56 14.77 37.20 3.06
2258 4195 3.754850 ACACACAAGATCATGGTGATGTG 59.245 43.478 19.56 17.02 39.49 3.21
2259 4196 3.754850 CACACAAGATCATGGTGATGTGT 59.245 43.478 16.75 16.75 44.31 3.72
2260 4197 4.937015 CACACAAGATCATGGTGATGTGTA 59.063 41.667 20.26 0.00 42.69 2.90
2261 4198 5.064325 CACACAAGATCATGGTGATGTGTAG 59.936 44.000 20.26 13.48 42.69 2.74
2262 4199 4.034858 CACAAGATCATGGTGATGTGTAGC 59.965 45.833 11.02 0.00 37.20 3.58
2263 4200 4.193865 CAAGATCATGGTGATGTGTAGCA 58.806 43.478 0.00 0.00 37.20 3.49
2264 4201 4.492494 AGATCATGGTGATGTGTAGCAA 57.508 40.909 0.00 0.00 37.20 3.91
2265 4202 4.194640 AGATCATGGTGATGTGTAGCAAC 58.805 43.478 0.00 0.00 37.20 4.17
2266 4203 2.345876 TCATGGTGATGTGTAGCAACG 58.654 47.619 0.00 0.00 30.94 4.10
2267 4204 2.028567 TCATGGTGATGTGTAGCAACGA 60.029 45.455 0.00 0.00 30.94 3.85
2268 4205 2.078849 TGGTGATGTGTAGCAACGAG 57.921 50.000 0.00 0.00 30.94 4.18
2269 4206 1.616374 TGGTGATGTGTAGCAACGAGA 59.384 47.619 0.00 0.00 30.94 4.04
2270 4207 2.263077 GGTGATGTGTAGCAACGAGAG 58.737 52.381 0.00 0.00 0.00 3.20
2271 4208 2.263077 GTGATGTGTAGCAACGAGAGG 58.737 52.381 0.00 0.00 0.00 3.69
2272 4209 1.204704 TGATGTGTAGCAACGAGAGGG 59.795 52.381 0.00 0.00 0.00 4.30
2273 4210 0.537188 ATGTGTAGCAACGAGAGGGG 59.463 55.000 0.00 0.00 0.00 4.79
2274 4211 0.541063 TGTGTAGCAACGAGAGGGGA 60.541 55.000 0.00 0.00 0.00 4.81
2275 4212 0.173708 GTGTAGCAACGAGAGGGGAG 59.826 60.000 0.00 0.00 0.00 4.30
2276 4213 0.251653 TGTAGCAACGAGAGGGGAGT 60.252 55.000 0.00 0.00 0.00 3.85
2277 4214 0.173708 GTAGCAACGAGAGGGGAGTG 59.826 60.000 0.00 0.00 0.00 3.51
2278 4215 0.251653 TAGCAACGAGAGGGGAGTGT 60.252 55.000 0.00 0.00 0.00 3.55
2279 4216 0.251653 AGCAACGAGAGGGGAGTGTA 60.252 55.000 0.00 0.00 0.00 2.90
2280 4217 0.824759 GCAACGAGAGGGGAGTGTAT 59.175 55.000 0.00 0.00 0.00 2.29
2281 4218 1.202428 GCAACGAGAGGGGAGTGTATC 60.202 57.143 0.00 0.00 0.00 2.24
2282 4219 1.065701 CAACGAGAGGGGAGTGTATCG 59.934 57.143 0.00 0.00 36.32 2.92
2283 4220 0.255318 ACGAGAGGGGAGTGTATCGT 59.745 55.000 0.00 0.00 38.46 3.73
2284 4221 0.945813 CGAGAGGGGAGTGTATCGTC 59.054 60.000 0.00 0.00 0.00 4.20
2285 4222 1.475392 CGAGAGGGGAGTGTATCGTCT 60.475 57.143 0.00 0.00 0.00 4.18
2286 4223 2.224233 CGAGAGGGGAGTGTATCGTCTA 60.224 54.545 0.00 0.00 0.00 2.59
2287 4224 3.557475 CGAGAGGGGAGTGTATCGTCTAT 60.557 52.174 0.00 0.00 0.00 1.98
2288 4225 4.322574 CGAGAGGGGAGTGTATCGTCTATA 60.323 50.000 0.00 0.00 0.00 1.31
2289 4226 5.627272 CGAGAGGGGAGTGTATCGTCTATAT 60.627 48.000 0.00 0.00 0.00 0.86
2290 4227 6.406737 CGAGAGGGGAGTGTATCGTCTATATA 60.407 46.154 0.00 0.00 0.00 0.86
2291 4228 7.454553 AGAGGGGAGTGTATCGTCTATATAT 57.545 40.000 0.00 0.00 0.00 0.86
2292 4229 7.874252 AGAGGGGAGTGTATCGTCTATATATT 58.126 38.462 0.00 0.00 0.00 1.28
2293 4230 7.994334 AGAGGGGAGTGTATCGTCTATATATTC 59.006 40.741 0.00 0.00 0.00 1.75
2294 4231 7.874252 AGGGGAGTGTATCGTCTATATATTCT 58.126 38.462 0.00 0.00 0.00 2.40
2295 4232 8.337739 AGGGGAGTGTATCGTCTATATATTCTT 58.662 37.037 0.00 0.00 0.00 2.52
2296 4233 8.407064 GGGGAGTGTATCGTCTATATATTCTTG 58.593 40.741 0.00 0.00 0.00 3.02
2297 4234 8.958506 GGGAGTGTATCGTCTATATATTCTTGT 58.041 37.037 0.00 0.00 0.00 3.16
2304 4241 8.789825 ATCGTCTATATATTCTTGTAGACCGT 57.210 34.615 5.78 0.00 39.74 4.83
2305 4242 9.881649 ATCGTCTATATATTCTTGTAGACCGTA 57.118 33.333 5.78 0.00 39.74 4.02
2306 4243 9.710900 TCGTCTATATATTCTTGTAGACCGTAA 57.289 33.333 5.78 0.00 39.74 3.18
2307 4244 9.970243 CGTCTATATATTCTTGTAGACCGTAAG 57.030 37.037 5.78 0.00 39.74 2.34
2308 4245 9.771915 GTCTATATATTCTTGTAGACCGTAAGC 57.228 37.037 0.00 0.00 37.93 3.09
2309 4246 8.663025 TCTATATATTCTTGTAGACCGTAAGCG 58.337 37.037 0.00 0.00 37.95 4.68
2326 4263 3.850207 CGGAAGCGTTATGACAACG 57.150 52.632 5.22 5.22 45.56 4.10
2333 4270 2.563670 CGTTATGACAACGCGTTTGA 57.436 45.000 24.21 9.37 38.73 2.69
2334 4271 3.098381 CGTTATGACAACGCGTTTGAT 57.902 42.857 24.21 16.05 38.73 2.57
2335 4272 2.832178 CGTTATGACAACGCGTTTGATG 59.168 45.455 24.21 14.87 38.73 3.07
2336 4273 3.663233 CGTTATGACAACGCGTTTGATGT 60.663 43.478 24.21 18.47 38.73 3.06
2337 4274 4.433152 CGTTATGACAACGCGTTTGATGTA 60.433 41.667 24.21 9.09 38.73 2.29
2338 4275 3.722555 ATGACAACGCGTTTGATGTAG 57.277 42.857 24.21 11.81 38.73 2.74
2339 4276 2.475818 TGACAACGCGTTTGATGTAGT 58.524 42.857 24.21 15.30 38.73 2.73
2340 4277 2.473609 TGACAACGCGTTTGATGTAGTC 59.526 45.455 24.21 22.94 38.73 2.59
2341 4278 1.454276 ACAACGCGTTTGATGTAGTCG 59.546 47.619 24.21 9.45 38.73 4.18
2342 4279 1.454276 CAACGCGTTTGATGTAGTCGT 59.546 47.619 24.21 0.00 37.39 4.34
2343 4280 2.617250 ACGCGTTTGATGTAGTCGTA 57.383 45.000 5.58 0.00 0.00 3.43
2344 4281 2.245096 ACGCGTTTGATGTAGTCGTAC 58.755 47.619 5.58 0.00 0.00 3.67
2345 4282 1.248489 CGCGTTTGATGTAGTCGTACG 59.752 52.381 9.53 9.53 38.49 3.67
2346 4283 2.245096 GCGTTTGATGTAGTCGTACGT 58.755 47.619 16.05 0.00 38.05 3.57
2347 4284 2.274740 GCGTTTGATGTAGTCGTACGTC 59.725 50.000 16.05 10.06 43.16 4.34
2348 4285 3.740590 CGTTTGATGTAGTCGTACGTCT 58.259 45.455 18.54 18.54 43.23 4.18
2349 4286 4.153986 CGTTTGATGTAGTCGTACGTCTT 58.846 43.478 19.61 2.66 43.23 3.01
2350 4287 4.259275 CGTTTGATGTAGTCGTACGTCTTC 59.741 45.833 19.61 15.02 43.23 2.87
2351 4288 5.149273 GTTTGATGTAGTCGTACGTCTTCA 58.851 41.667 19.61 19.79 43.23 3.02
2352 4289 4.332186 TGATGTAGTCGTACGTCTTCAC 57.668 45.455 19.61 13.19 43.23 3.18
2365 4302 2.722071 GTCTTCACGATCGACTGATCC 58.278 52.381 24.34 3.45 46.89 3.36
2366 4303 2.356382 GTCTTCACGATCGACTGATCCT 59.644 50.000 24.34 0.00 46.89 3.24
2367 4304 3.560481 GTCTTCACGATCGACTGATCCTA 59.440 47.826 24.34 0.00 46.89 2.94
2368 4305 3.810386 TCTTCACGATCGACTGATCCTAG 59.190 47.826 24.34 10.05 46.89 3.02
2369 4306 3.195471 TCACGATCGACTGATCCTAGT 57.805 47.619 24.34 0.00 46.89 2.57
2370 4307 4.332428 TCACGATCGACTGATCCTAGTA 57.668 45.455 24.34 0.00 46.89 1.82
2371 4308 4.056740 TCACGATCGACTGATCCTAGTAC 58.943 47.826 24.34 0.00 46.89 2.73
2372 4309 3.186817 CACGATCGACTGATCCTAGTACC 59.813 52.174 24.34 0.00 46.89 3.34
2373 4310 2.412429 CGATCGACTGATCCTAGTACCG 59.588 54.545 10.26 0.00 46.89 4.02
2374 4311 3.661944 GATCGACTGATCCTAGTACCGA 58.338 50.000 0.00 0.00 44.39 4.69
2375 4312 3.548745 TCGACTGATCCTAGTACCGAA 57.451 47.619 0.00 0.00 28.14 4.30
2376 4313 4.082665 TCGACTGATCCTAGTACCGAAT 57.917 45.455 0.00 0.00 28.14 3.34
2377 4314 3.813724 TCGACTGATCCTAGTACCGAATG 59.186 47.826 0.00 0.00 28.14 2.67
2378 4315 3.564644 CGACTGATCCTAGTACCGAATGT 59.435 47.826 0.00 0.00 0.00 2.71
2379 4316 4.753610 CGACTGATCCTAGTACCGAATGTA 59.246 45.833 0.00 0.00 0.00 2.29
2388 4325 4.104143 CCGAATGTACGGCACCTC 57.896 61.111 0.00 0.00 46.20 3.85
2389 4326 1.520787 CCGAATGTACGGCACCTCC 60.521 63.158 0.00 0.00 46.20 4.30
2399 4336 4.819761 GCACCTCCGCGATCTGCA 62.820 66.667 8.23 0.00 46.97 4.41
2400 4337 2.887568 CACCTCCGCGATCTGCAC 60.888 66.667 8.23 0.00 46.97 4.57
2401 4338 3.381983 ACCTCCGCGATCTGCACA 61.382 61.111 8.23 0.00 46.97 4.57
2402 4339 2.887568 CCTCCGCGATCTGCACAC 60.888 66.667 8.23 0.00 46.97 3.82
2403 4340 2.125952 CTCCGCGATCTGCACACA 60.126 61.111 8.23 0.00 46.97 3.72
2404 4341 1.520120 CTCCGCGATCTGCACACAT 60.520 57.895 8.23 0.00 46.97 3.21
2405 4342 1.079197 TCCGCGATCTGCACACATT 60.079 52.632 8.23 0.00 46.97 2.71
2406 4343 1.083806 TCCGCGATCTGCACACATTC 61.084 55.000 8.23 0.00 46.97 2.67
2407 4344 1.360931 CCGCGATCTGCACACATTCA 61.361 55.000 8.23 0.00 46.97 2.57
2408 4345 0.025898 CGCGATCTGCACACATTCAG 59.974 55.000 0.00 0.00 46.97 3.02
2409 4346 0.247974 GCGATCTGCACACATTCAGC 60.248 55.000 4.93 0.00 45.45 4.26
2410 4347 1.366679 CGATCTGCACACATTCAGCT 58.633 50.000 0.00 0.00 0.00 4.24
2411 4348 1.326852 CGATCTGCACACATTCAGCTC 59.673 52.381 0.00 0.00 0.00 4.09
2412 4349 1.326852 GATCTGCACACATTCAGCTCG 59.673 52.381 0.00 0.00 0.00 5.03
2413 4350 0.318120 TCTGCACACATTCAGCTCGA 59.682 50.000 0.00 0.00 0.00 4.04
2414 4351 1.066645 TCTGCACACATTCAGCTCGAT 60.067 47.619 0.00 0.00 0.00 3.59
2415 4352 1.062148 CTGCACACATTCAGCTCGATG 59.938 52.381 4.65 4.65 0.00 3.84
2416 4353 1.338011 TGCACACATTCAGCTCGATGA 60.338 47.619 11.72 0.00 0.00 2.92
2417 4354 1.061711 GCACACATTCAGCTCGATGAC 59.938 52.381 11.72 0.00 0.00 3.06
2418 4355 1.322637 CACACATTCAGCTCGATGACG 59.677 52.381 11.72 5.92 41.26 4.35
2419 4356 1.067565 ACACATTCAGCTCGATGACGT 60.068 47.619 11.72 0.00 40.69 4.34
2420 4357 1.585668 CACATTCAGCTCGATGACGTC 59.414 52.381 9.11 9.11 40.69 4.34
2421 4358 1.203928 CATTCAGCTCGATGACGTCC 58.796 55.000 14.12 0.00 40.69 4.79
2422 4359 0.103208 ATTCAGCTCGATGACGTCCC 59.897 55.000 14.12 3.95 40.69 4.46
2423 4360 2.266376 TTCAGCTCGATGACGTCCCG 62.266 60.000 14.12 16.31 40.69 5.14
2424 4361 4.194720 AGCTCGATGACGTCCCGC 62.195 66.667 14.12 8.19 40.69 6.13
2425 4362 4.492160 GCTCGATGACGTCCCGCA 62.492 66.667 14.12 6.32 40.69 5.69
2426 4363 2.180769 CTCGATGACGTCCCGCAA 59.819 61.111 14.12 1.28 40.69 4.85
2427 4364 1.445410 CTCGATGACGTCCCGCAAA 60.445 57.895 14.12 0.59 40.69 3.68
2428 4365 1.683790 CTCGATGACGTCCCGCAAAC 61.684 60.000 14.12 0.00 40.69 2.93
2429 4366 1.736645 CGATGACGTCCCGCAAACT 60.737 57.895 14.12 0.00 34.56 2.66
2430 4367 1.683790 CGATGACGTCCCGCAAACTC 61.684 60.000 14.12 0.00 34.56 3.01
2431 4368 0.669318 GATGACGTCCCGCAAACTCA 60.669 55.000 14.12 0.00 0.00 3.41
2432 4369 0.949105 ATGACGTCCCGCAAACTCAC 60.949 55.000 14.12 0.00 0.00 3.51
2433 4370 2.654912 GACGTCCCGCAAACTCACG 61.655 63.158 3.51 0.00 36.54 4.35
2434 4371 2.355363 CGTCCCGCAAACTCACGA 60.355 61.111 0.00 0.00 32.08 4.35
2435 4372 1.736645 CGTCCCGCAAACTCACGAT 60.737 57.895 0.00 0.00 32.08 3.73
2436 4373 1.683790 CGTCCCGCAAACTCACGATC 61.684 60.000 0.00 0.00 32.08 3.69
2437 4374 1.079405 TCCCGCAAACTCACGATCC 60.079 57.895 0.00 0.00 0.00 3.36
2438 4375 1.375396 CCCGCAAACTCACGATCCA 60.375 57.895 0.00 0.00 0.00 3.41
2439 4376 1.361668 CCCGCAAACTCACGATCCAG 61.362 60.000 0.00 0.00 0.00 3.86
2440 4377 0.670546 CCGCAAACTCACGATCCAGT 60.671 55.000 0.00 0.00 0.00 4.00
2441 4378 1.403647 CCGCAAACTCACGATCCAGTA 60.404 52.381 0.00 0.00 0.00 2.74
2442 4379 1.920574 CGCAAACTCACGATCCAGTAG 59.079 52.381 0.00 0.00 0.00 2.57
2443 4380 2.415491 CGCAAACTCACGATCCAGTAGA 60.415 50.000 0.00 0.00 0.00 2.59
2444 4381 3.182967 GCAAACTCACGATCCAGTAGAG 58.817 50.000 0.00 0.00 0.00 2.43
2445 4382 3.182967 CAAACTCACGATCCAGTAGAGC 58.817 50.000 0.00 0.00 0.00 4.09
2446 4383 2.428544 ACTCACGATCCAGTAGAGCT 57.571 50.000 0.00 0.00 0.00 4.09
2447 4384 2.729194 ACTCACGATCCAGTAGAGCTT 58.271 47.619 0.00 0.00 0.00 3.74
2448 4385 2.685897 ACTCACGATCCAGTAGAGCTTC 59.314 50.000 0.00 0.00 0.00 3.86
2449 4386 1.671328 TCACGATCCAGTAGAGCTTCG 59.329 52.381 0.00 0.00 32.83 3.79
2450 4387 1.402259 CACGATCCAGTAGAGCTTCGT 59.598 52.381 0.19 0.19 38.33 3.85
2451 4388 1.402259 ACGATCCAGTAGAGCTTCGTG 59.598 52.381 5.11 0.00 36.98 4.35
2452 4389 1.268794 CGATCCAGTAGAGCTTCGTGG 60.269 57.143 0.00 0.00 0.00 4.94
2453 4390 1.067821 GATCCAGTAGAGCTTCGTGGG 59.932 57.143 0.00 0.00 0.00 4.61
2454 4391 0.039180 TCCAGTAGAGCTTCGTGGGA 59.961 55.000 0.00 0.00 0.00 4.37
2455 4392 0.457851 CCAGTAGAGCTTCGTGGGAG 59.542 60.000 0.00 0.00 0.00 4.30
2456 4393 1.464734 CAGTAGAGCTTCGTGGGAGA 58.535 55.000 0.00 0.00 0.00 3.71
2457 4394 1.403679 CAGTAGAGCTTCGTGGGAGAG 59.596 57.143 0.00 0.00 0.00 3.20
2458 4395 1.004979 AGTAGAGCTTCGTGGGAGAGT 59.995 52.381 0.00 0.00 0.00 3.24
2459 4396 1.819903 GTAGAGCTTCGTGGGAGAGTT 59.180 52.381 0.00 0.00 0.00 3.01
2460 4397 1.343069 AGAGCTTCGTGGGAGAGTTT 58.657 50.000 0.00 0.00 0.00 2.66
2461 4398 1.273886 AGAGCTTCGTGGGAGAGTTTC 59.726 52.381 0.00 0.00 0.00 2.78
2462 4399 0.038159 AGCTTCGTGGGAGAGTTTCG 60.038 55.000 0.00 0.00 0.00 3.46
2463 4400 0.319641 GCTTCGTGGGAGAGTTTCGT 60.320 55.000 0.00 0.00 0.00 3.85
2464 4401 1.699343 CTTCGTGGGAGAGTTTCGTC 58.301 55.000 0.00 0.00 0.00 4.20
2465 4402 1.000607 CTTCGTGGGAGAGTTTCGTCA 60.001 52.381 0.00 0.00 0.00 4.35
2466 4403 0.596577 TCGTGGGAGAGTTTCGTCAG 59.403 55.000 0.00 0.00 0.00 3.51
2467 4404 1.009389 CGTGGGAGAGTTTCGTCAGC 61.009 60.000 0.00 0.00 0.00 4.26
2468 4405 0.033504 GTGGGAGAGTTTCGTCAGCA 59.966 55.000 0.00 0.00 0.00 4.41
2469 4406 0.033504 TGGGAGAGTTTCGTCAGCAC 59.966 55.000 0.00 0.00 0.00 4.40
2490 4427 3.398920 GGCGTGATGACGGTGATG 58.601 61.111 6.88 0.00 46.20 3.07
2491 4428 1.153647 GGCGTGATGACGGTGATGA 60.154 57.895 6.88 0.00 46.20 2.92
2492 4429 0.530650 GGCGTGATGACGGTGATGAT 60.531 55.000 6.88 0.00 46.20 2.45
2493 4430 0.578683 GCGTGATGACGGTGATGATG 59.421 55.000 6.88 0.00 46.20 3.07
2494 4431 1.926561 CGTGATGACGGTGATGATGT 58.073 50.000 0.00 0.00 42.18 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.029964 GACGGCGACCTTTGGTGA 59.970 61.111 16.62 0.00 35.25 4.02
27 28 1.597027 CTTGACGGCGACCTTTGGT 60.597 57.895 16.62 0.00 39.44 3.67
40 41 1.865340 GGTCGAAGTTGTGTCCTTGAC 59.135 52.381 0.00 0.00 0.00 3.18
102 103 0.601558 TCTTAGACGGCGAGTGCTTT 59.398 50.000 16.62 0.00 42.25 3.51
200 201 2.186384 CTCTGCTGCTCTTCCCGG 59.814 66.667 0.00 0.00 0.00 5.73
231 232 2.002977 CAGAGCATCCCCCTTCCCA 61.003 63.158 0.00 0.00 33.66 4.37
282 283 3.426568 GTGCTGCGCCCTCTGAAC 61.427 66.667 4.18 0.00 0.00 3.18
325 326 5.777223 AGGATCAAATATCTCAGATCGACCA 59.223 40.000 0.00 0.00 38.16 4.02
327 328 6.686630 ACAGGATCAAATATCTCAGATCGAC 58.313 40.000 0.00 0.00 38.16 4.20
328 329 6.907853 ACAGGATCAAATATCTCAGATCGA 57.092 37.500 0.00 0.00 38.16 3.59
329 330 7.543868 GGTTACAGGATCAAATATCTCAGATCG 59.456 40.741 0.00 0.00 38.16 3.69
330 331 8.592809 AGGTTACAGGATCAAATATCTCAGATC 58.407 37.037 0.00 0.00 36.91 2.75
331 332 8.373981 CAGGTTACAGGATCAAATATCTCAGAT 58.626 37.037 0.00 0.00 0.00 2.90
332 333 7.345653 ACAGGTTACAGGATCAAATATCTCAGA 59.654 37.037 0.00 0.00 0.00 3.27
437 442 4.156008 GCCGTGGTAAGATCTCAATTGTTT 59.844 41.667 5.13 0.00 0.00 2.83
560 571 5.862924 ATGTCAGTCACCTCAAAATAACG 57.137 39.130 0.00 0.00 0.00 3.18
568 579 3.767131 TCGGATAAATGTCAGTCACCTCA 59.233 43.478 0.00 0.00 0.00 3.86
589 600 3.550842 GCAACATGGTCAGGAACAAACTC 60.551 47.826 0.00 0.00 0.00 3.01
601 612 0.745845 AGGAGCATCGCAACATGGTC 60.746 55.000 9.82 9.82 46.34 4.02
730 761 4.500127 GGTCTTTCTTTAGGAGCAGAGAC 58.500 47.826 0.00 0.00 32.38 3.36
755 2634 2.637947 GGAAAGTTCCAGAGCTCCATC 58.362 52.381 10.93 0.00 46.76 3.51
756 2635 2.797177 GGAAAGTTCCAGAGCTCCAT 57.203 50.000 10.93 0.00 46.76 3.41
849 2741 4.617959 AGTTTATATCGGTGATGACGTGG 58.382 43.478 0.00 0.00 0.00 4.94
851 2743 4.261909 GGGAGTTTATATCGGTGATGACGT 60.262 45.833 0.00 0.00 0.00 4.34
853 2745 5.470047 AGGGAGTTTATATCGGTGATGAC 57.530 43.478 0.00 0.00 0.00 3.06
854 2746 4.527038 GGAGGGAGTTTATATCGGTGATGA 59.473 45.833 0.00 0.00 0.00 2.92
856 2748 4.753186 AGGAGGGAGTTTATATCGGTGAT 58.247 43.478 0.00 0.00 0.00 3.06
884 2781 2.230940 GGTGATGATGCGACGGACG 61.231 63.158 0.00 0.00 45.66 4.79
885 2782 0.739462 TTGGTGATGATGCGACGGAC 60.739 55.000 0.00 0.00 0.00 4.79
886 2783 0.460109 CTTGGTGATGATGCGACGGA 60.460 55.000 0.00 0.00 0.00 4.69
933 2831 1.234821 TTGGACTGCGTTGGATTGTC 58.765 50.000 0.00 0.00 0.00 3.18
983 2885 1.518133 ATTCTCGCTCGCTGCTGAC 60.518 57.895 0.00 0.00 40.11 3.51
1303 3207 2.424733 GGTACCTGGCGTCCTCCTC 61.425 68.421 4.06 0.00 0.00 3.71
1452 3356 1.136329 TCTTGGGCTTCTTGGGCTCT 61.136 55.000 0.00 0.00 0.00 4.09
1498 3410 1.149174 GGTCGTCCCATCCATGCAT 59.851 57.895 0.00 0.00 0.00 3.96
1499 3411 2.589540 GGTCGTCCCATCCATGCA 59.410 61.111 0.00 0.00 0.00 3.96
1500 3412 2.587322 TTCGGTCGTCCCATCCATGC 62.587 60.000 0.00 0.00 0.00 4.06
1501 3413 0.810031 GTTCGGTCGTCCCATCCATG 60.810 60.000 0.00 0.00 0.00 3.66
1548 3461 1.880340 CACTCGGCAGCTTCGATCC 60.880 63.158 9.05 0.00 36.01 3.36
1560 3473 2.163815 CACTAGTTCACTACCCACTCGG 59.836 54.545 0.00 0.00 37.81 4.63
1561 3474 3.079578 TCACTAGTTCACTACCCACTCG 58.920 50.000 0.00 0.00 0.00 4.18
1562 3475 4.201930 CGATCACTAGTTCACTACCCACTC 60.202 50.000 0.00 0.00 0.00 3.51
1563 3476 3.695060 CGATCACTAGTTCACTACCCACT 59.305 47.826 0.00 0.00 0.00 4.00
1565 3478 3.959293 TCGATCACTAGTTCACTACCCA 58.041 45.455 0.00 0.00 0.00 4.51
1566 3479 4.793353 GCATCGATCACTAGTTCACTACCC 60.793 50.000 0.00 0.00 0.00 3.69
1567 3480 4.036971 AGCATCGATCACTAGTTCACTACC 59.963 45.833 0.00 0.00 0.00 3.18
1568 3481 5.176407 AGCATCGATCACTAGTTCACTAC 57.824 43.478 0.00 0.00 0.00 2.73
1569 3482 5.836821 AAGCATCGATCACTAGTTCACTA 57.163 39.130 0.00 0.00 0.00 2.74
1570 3483 4.727507 AAGCATCGATCACTAGTTCACT 57.272 40.909 0.00 0.00 0.00 3.41
1571 3484 4.979197 CCTAAGCATCGATCACTAGTTCAC 59.021 45.833 0.00 0.00 0.00 3.18
1572 3485 4.038042 CCCTAAGCATCGATCACTAGTTCA 59.962 45.833 0.00 0.00 0.00 3.18
1573 3486 4.278669 TCCCTAAGCATCGATCACTAGTTC 59.721 45.833 0.00 0.00 0.00 3.01
1574 3487 4.215908 TCCCTAAGCATCGATCACTAGTT 58.784 43.478 0.00 0.00 0.00 2.24
1575 3488 3.823873 CTCCCTAAGCATCGATCACTAGT 59.176 47.826 0.00 0.00 0.00 2.57
1576 3489 3.823873 ACTCCCTAAGCATCGATCACTAG 59.176 47.826 0.00 0.00 0.00 2.57
1589 3502 4.090090 TCTCAGGAAACTCACTCCCTAAG 58.910 47.826 0.00 0.00 40.21 2.18
1625 3538 4.686091 CGAGCAGAGATAGAAAACACACAA 59.314 41.667 0.00 0.00 0.00 3.33
1626 3539 4.237724 CGAGCAGAGATAGAAAACACACA 58.762 43.478 0.00 0.00 0.00 3.72
1627 3540 4.238514 ACGAGCAGAGATAGAAAACACAC 58.761 43.478 0.00 0.00 0.00 3.82
1657 3570 3.211865 ACTAGTCACACAACACTCTCGA 58.788 45.455 0.00 0.00 0.00 4.04
1732 3645 8.691797 ACTTATTTTGAGCTGGTAAGTTTGAAA 58.308 29.630 0.00 0.00 33.19 2.69
1736 3670 7.502561 AGTCACTTATTTTGAGCTGGTAAGTTT 59.497 33.333 0.00 0.00 34.39 2.66
1737 3671 6.998673 AGTCACTTATTTTGAGCTGGTAAGTT 59.001 34.615 0.00 0.00 34.39 2.66
1738 3672 6.534634 AGTCACTTATTTTGAGCTGGTAAGT 58.465 36.000 0.00 0.00 36.37 2.24
1740 3674 6.530120 TGAGTCACTTATTTTGAGCTGGTAA 58.470 36.000 0.00 0.00 0.00 2.85
1741 3675 6.109156 TGAGTCACTTATTTTGAGCTGGTA 57.891 37.500 0.00 0.00 0.00 3.25
1742 3676 4.973168 TGAGTCACTTATTTTGAGCTGGT 58.027 39.130 0.00 0.00 0.00 4.00
1743 3677 5.471456 ACTTGAGTCACTTATTTTGAGCTGG 59.529 40.000 0.00 0.00 0.00 4.85
1744 3678 6.551385 ACTTGAGTCACTTATTTTGAGCTG 57.449 37.500 0.00 0.00 0.00 4.24
1745 3679 7.067494 ACAAACTTGAGTCACTTATTTTGAGCT 59.933 33.333 11.12 0.00 0.00 4.09
1746 3680 7.196331 ACAAACTTGAGTCACTTATTTTGAGC 58.804 34.615 11.12 0.00 0.00 4.26
1747 3681 9.651718 GTACAAACTTGAGTCACTTATTTTGAG 57.348 33.333 11.12 0.00 0.00 3.02
1748 3682 9.391006 AGTACAAACTTGAGTCACTTATTTTGA 57.609 29.630 11.12 0.00 29.00 2.69
1765 3699 7.783042 AGAGACACTTCAAGTTAGTACAAACT 58.217 34.615 0.00 0.00 41.46 2.66
1766 3700 8.421673 AAGAGACACTTCAAGTTAGTACAAAC 57.578 34.615 0.00 0.00 32.91 2.93
1774 3708 9.273016 CCAAGATTAAAGAGACACTTCAAGTTA 57.727 33.333 0.00 0.00 37.93 2.24
1775 3709 7.229506 CCCAAGATTAAAGAGACACTTCAAGTT 59.770 37.037 0.00 0.00 37.93 2.66
1776 3710 6.712547 CCCAAGATTAAAGAGACACTTCAAGT 59.287 38.462 0.00 0.00 37.93 3.16
1777 3711 6.150140 CCCCAAGATTAAAGAGACACTTCAAG 59.850 42.308 0.00 0.00 37.93 3.02
1778 3712 6.003950 CCCCAAGATTAAAGAGACACTTCAA 58.996 40.000 0.00 0.00 37.93 2.69
1779 3713 5.514834 CCCCCAAGATTAAAGAGACACTTCA 60.515 44.000 0.00 0.00 37.93 3.02
1780 3714 4.944317 CCCCCAAGATTAAAGAGACACTTC 59.056 45.833 0.00 0.00 37.93 3.01
1783 3717 4.010349 CACCCCCAAGATTAAAGAGACAC 58.990 47.826 0.00 0.00 0.00 3.67
1785 3719 3.017442 GCACCCCCAAGATTAAAGAGAC 58.983 50.000 0.00 0.00 0.00 3.36
1790 3724 2.243810 GTGTGCACCCCCAAGATTAAA 58.756 47.619 15.69 0.00 0.00 1.52
1791 3725 1.145945 TGTGTGCACCCCCAAGATTAA 59.854 47.619 15.69 0.00 0.00 1.40
1801 3735 2.888834 ATTTGAAGTTGTGTGCACCC 57.111 45.000 15.69 2.52 0.00 4.61
1804 3738 9.979578 ATTTAGAATTATTTGAAGTTGTGTGCA 57.020 25.926 0.00 0.00 0.00 4.57
1900 3837 4.889409 AGTGGCTCTGTTTTTCATTTCAGA 59.111 37.500 0.00 0.00 35.92 3.27
1966 3903 4.767928 AGTAAAAACCACCACAAACAGACA 59.232 37.500 0.00 0.00 0.00 3.41
1967 3904 5.319140 AGTAAAAACCACCACAAACAGAC 57.681 39.130 0.00 0.00 0.00 3.51
1968 3905 5.064962 CGTAGTAAAAACCACCACAAACAGA 59.935 40.000 0.00 0.00 0.00 3.41
1969 3906 5.163733 ACGTAGTAAAAACCACCACAAACAG 60.164 40.000 0.00 0.00 41.94 3.16
2010 3947 7.074494 AGGGAGTACCAATCTATCTTCTACTCT 59.926 40.741 0.00 0.00 43.89 3.24
2013 3950 6.434965 GGAGGGAGTACCAATCTATCTTCTAC 59.565 46.154 0.00 0.00 43.89 2.59
2014 3951 6.553857 GGAGGGAGTACCAATCTATCTTCTA 58.446 44.000 0.00 0.00 43.89 2.10
2015 3952 5.399113 GGAGGGAGTACCAATCTATCTTCT 58.601 45.833 0.00 0.00 43.89 2.85
2016 3953 4.218852 CGGAGGGAGTACCAATCTATCTTC 59.781 50.000 0.00 0.00 43.89 2.87
2017 3954 4.153411 CGGAGGGAGTACCAATCTATCTT 58.847 47.826 0.00 0.00 43.89 2.40
2018 3955 3.140519 ACGGAGGGAGTACCAATCTATCT 59.859 47.826 0.00 0.00 43.89 1.98
2019 3956 3.498334 ACGGAGGGAGTACCAATCTATC 58.502 50.000 0.00 0.00 43.89 2.08
2020 3957 3.140519 AGACGGAGGGAGTACCAATCTAT 59.859 47.826 0.00 0.00 43.89 1.98
2021 3958 2.512896 AGACGGAGGGAGTACCAATCTA 59.487 50.000 0.00 0.00 43.89 1.98
2022 3959 1.288335 AGACGGAGGGAGTACCAATCT 59.712 52.381 0.00 0.00 43.89 2.40
2023 3960 1.682323 GAGACGGAGGGAGTACCAATC 59.318 57.143 0.00 0.00 43.89 2.67
2024 3961 1.006758 TGAGACGGAGGGAGTACCAAT 59.993 52.381 0.00 0.00 43.89 3.16
2025 3962 0.406750 TGAGACGGAGGGAGTACCAA 59.593 55.000 0.00 0.00 43.89 3.67
2026 3963 0.629596 ATGAGACGGAGGGAGTACCA 59.370 55.000 0.00 0.00 43.89 3.25
2027 3964 2.158638 AGTATGAGACGGAGGGAGTACC 60.159 54.545 0.00 0.00 40.67 3.34
2028 3965 2.879646 CAGTATGAGACGGAGGGAGTAC 59.120 54.545 0.00 0.00 39.69 2.73
2029 3966 2.508716 ACAGTATGAGACGGAGGGAGTA 59.491 50.000 0.00 0.00 39.69 2.59
2030 3967 1.285373 ACAGTATGAGACGGAGGGAGT 59.715 52.381 0.00 0.00 39.69 3.85
2031 3968 2.060050 ACAGTATGAGACGGAGGGAG 57.940 55.000 0.00 0.00 39.69 4.30
2032 3969 3.657398 TTACAGTATGAGACGGAGGGA 57.343 47.619 0.00 0.00 39.69 4.20
2033 3970 4.730949 TTTTACAGTATGAGACGGAGGG 57.269 45.455 0.00 0.00 39.69 4.30
2034 3971 5.661458 ACATTTTACAGTATGAGACGGAGG 58.339 41.667 0.00 0.00 39.69 4.30
2035 3972 7.596749 AAACATTTTACAGTATGAGACGGAG 57.403 36.000 0.00 0.00 39.69 4.63
2036 3973 7.972832 AAAACATTTTACAGTATGAGACGGA 57.027 32.000 0.00 0.00 39.69 4.69
2037 3974 8.286800 TCAAAAACATTTTACAGTATGAGACGG 58.713 33.333 0.00 0.00 39.69 4.79
2038 3975 9.103048 GTCAAAAACATTTTACAGTATGAGACG 57.897 33.333 0.00 0.00 39.69 4.18
2039 3976 9.944663 TGTCAAAAACATTTTACAGTATGAGAC 57.055 29.630 0.00 0.00 33.62 3.36
2040 3977 9.944663 GTGTCAAAAACATTTTACAGTATGAGA 57.055 29.630 0.00 0.00 40.80 3.27
2041 3978 9.950680 AGTGTCAAAAACATTTTACAGTATGAG 57.049 29.630 0.00 0.00 40.80 2.90
2060 3997 9.811995 ACGTAATGCTTAATTATCTAGTGTCAA 57.188 29.630 0.00 0.00 33.32 3.18
2061 3998 9.811995 AACGTAATGCTTAATTATCTAGTGTCA 57.188 29.630 0.00 0.00 33.32 3.58
2076 4013 9.680315 GAGAGAGTATGTATAAACGTAATGCTT 57.320 33.333 0.00 0.00 0.00 3.91
2077 4014 8.847196 TGAGAGAGTATGTATAAACGTAATGCT 58.153 33.333 0.00 0.00 0.00 3.79
2078 4015 9.119329 CTGAGAGAGTATGTATAAACGTAATGC 57.881 37.037 0.00 0.00 0.00 3.56
2083 4020 8.737175 TGAAACTGAGAGAGTATGTATAAACGT 58.263 33.333 0.00 0.00 33.09 3.99
2084 4021 9.227490 CTGAAACTGAGAGAGTATGTATAAACG 57.773 37.037 0.00 0.00 33.09 3.60
2085 4022 9.026074 GCTGAAACTGAGAGAGTATGTATAAAC 57.974 37.037 0.00 0.00 33.09 2.01
2086 4023 7.915923 CGCTGAAACTGAGAGAGTATGTATAAA 59.084 37.037 0.00 0.00 33.09 1.40
2087 4024 7.067129 ACGCTGAAACTGAGAGAGTATGTATAA 59.933 37.037 0.00 0.00 33.09 0.98
2088 4025 6.542735 ACGCTGAAACTGAGAGAGTATGTATA 59.457 38.462 0.00 0.00 33.09 1.47
2089 4026 5.358442 ACGCTGAAACTGAGAGAGTATGTAT 59.642 40.000 0.00 0.00 33.09 2.29
2090 4027 4.700692 ACGCTGAAACTGAGAGAGTATGTA 59.299 41.667 0.00 0.00 33.09 2.29
2091 4028 3.508012 ACGCTGAAACTGAGAGAGTATGT 59.492 43.478 0.00 0.00 33.09 2.29
2092 4029 4.101942 GACGCTGAAACTGAGAGAGTATG 58.898 47.826 0.00 0.00 33.09 2.39
2093 4030 3.129638 GGACGCTGAAACTGAGAGAGTAT 59.870 47.826 0.00 0.00 33.09 2.12
2094 4031 2.488545 GGACGCTGAAACTGAGAGAGTA 59.511 50.000 0.00 0.00 33.09 2.59
2095 4032 1.271102 GGACGCTGAAACTGAGAGAGT 59.729 52.381 0.00 0.00 35.94 3.24
2096 4033 1.270826 TGGACGCTGAAACTGAGAGAG 59.729 52.381 0.00 0.00 0.00 3.20
2097 4034 1.328279 TGGACGCTGAAACTGAGAGA 58.672 50.000 0.00 0.00 0.00 3.10
2098 4035 2.154854 TTGGACGCTGAAACTGAGAG 57.845 50.000 0.00 0.00 0.00 3.20
2099 4036 2.224281 ACATTGGACGCTGAAACTGAGA 60.224 45.455 0.00 0.00 0.00 3.27
2100 4037 2.146342 ACATTGGACGCTGAAACTGAG 58.854 47.619 0.00 0.00 0.00 3.35
2101 4038 2.254546 ACATTGGACGCTGAAACTGA 57.745 45.000 0.00 0.00 0.00 3.41
2102 4039 3.354089 AAACATTGGACGCTGAAACTG 57.646 42.857 0.00 0.00 0.00 3.16
2103 4040 4.111916 CAAAAACATTGGACGCTGAAACT 58.888 39.130 0.00 0.00 0.00 2.66
2104 4041 4.026886 GTCAAAAACATTGGACGCTGAAAC 60.027 41.667 0.00 0.00 0.00 2.78
2105 4042 4.109050 GTCAAAAACATTGGACGCTGAAA 58.891 39.130 0.00 0.00 0.00 2.69
2106 4043 3.129462 TGTCAAAAACATTGGACGCTGAA 59.871 39.130 0.00 0.00 31.20 3.02
2107 4044 2.685388 TGTCAAAAACATTGGACGCTGA 59.315 40.909 0.00 0.00 31.20 4.26
2108 4045 2.788786 GTGTCAAAAACATTGGACGCTG 59.211 45.455 3.08 0.00 40.80 5.18
2109 4046 2.687935 AGTGTCAAAAACATTGGACGCT 59.312 40.909 6.38 6.38 43.91 5.07
2110 4047 3.078594 AGTGTCAAAAACATTGGACGC 57.921 42.857 2.20 2.20 40.80 5.19
2111 4048 5.666969 TCTAGTGTCAAAAACATTGGACG 57.333 39.130 0.00 0.00 40.80 4.79
2123 4060 9.811995 ACGTAATGCTTAATTATCTAGTGTCAA 57.188 29.630 0.00 0.00 33.32 3.18
2124 4061 9.811995 AACGTAATGCTTAATTATCTAGTGTCA 57.188 29.630 0.00 0.00 33.32 3.58
2139 4076 9.680315 GAGAGAGTATGTATAAACGTAATGCTT 57.320 33.333 0.00 0.00 0.00 3.91
2140 4077 8.847196 TGAGAGAGTATGTATAAACGTAATGCT 58.153 33.333 0.00 0.00 0.00 3.79
2141 4078 9.119329 CTGAGAGAGTATGTATAAACGTAATGC 57.881 37.037 0.00 0.00 0.00 3.56
2146 4083 8.737175 TGAAACTGAGAGAGTATGTATAAACGT 58.263 33.333 0.00 0.00 33.09 3.99
2147 4084 9.227490 CTGAAACTGAGAGAGTATGTATAAACG 57.773 37.037 0.00 0.00 33.09 3.60
2148 4085 9.026074 GCTGAAACTGAGAGAGTATGTATAAAC 57.974 37.037 0.00 0.00 33.09 2.01
2149 4086 7.915923 CGCTGAAACTGAGAGAGTATGTATAAA 59.084 37.037 0.00 0.00 33.09 1.40
2150 4087 7.067129 ACGCTGAAACTGAGAGAGTATGTATAA 59.933 37.037 0.00 0.00 33.09 0.98
2151 4088 6.542735 ACGCTGAAACTGAGAGAGTATGTATA 59.457 38.462 0.00 0.00 33.09 1.47
2152 4089 5.358442 ACGCTGAAACTGAGAGAGTATGTAT 59.642 40.000 0.00 0.00 33.09 2.29
2153 4090 4.700692 ACGCTGAAACTGAGAGAGTATGTA 59.299 41.667 0.00 0.00 33.09 2.29
2154 4091 3.508012 ACGCTGAAACTGAGAGAGTATGT 59.492 43.478 0.00 0.00 33.09 2.29
2155 4092 4.101942 GACGCTGAAACTGAGAGAGTATG 58.898 47.826 0.00 0.00 33.09 2.39
2156 4093 3.129638 GGACGCTGAAACTGAGAGAGTAT 59.870 47.826 0.00 0.00 33.09 2.12
2157 4094 2.488545 GGACGCTGAAACTGAGAGAGTA 59.511 50.000 0.00 0.00 33.09 2.59
2158 4095 1.271102 GGACGCTGAAACTGAGAGAGT 59.729 52.381 0.00 0.00 35.94 3.24
2159 4096 1.403514 GGGACGCTGAAACTGAGAGAG 60.404 57.143 0.00 0.00 0.00 3.20
2160 4097 0.603569 GGGACGCTGAAACTGAGAGA 59.396 55.000 0.00 0.00 0.00 3.10
2161 4098 0.318441 TGGGACGCTGAAACTGAGAG 59.682 55.000 0.00 0.00 0.00 3.20
2162 4099 0.756294 TTGGGACGCTGAAACTGAGA 59.244 50.000 0.00 0.00 0.00 3.27
2163 4100 1.593196 TTTGGGACGCTGAAACTGAG 58.407 50.000 0.00 0.00 0.00 3.35
2164 4101 2.045561 TTTTGGGACGCTGAAACTGA 57.954 45.000 0.00 0.00 0.00 3.41
2165 4102 3.004734 AGAATTTTGGGACGCTGAAACTG 59.995 43.478 0.00 0.00 0.00 3.16
2166 4103 3.222603 AGAATTTTGGGACGCTGAAACT 58.777 40.909 0.00 0.00 0.00 2.66
2167 4104 3.253432 AGAGAATTTTGGGACGCTGAAAC 59.747 43.478 0.00 0.00 0.00 2.78
2168 4105 3.486383 AGAGAATTTTGGGACGCTGAAA 58.514 40.909 0.00 0.00 0.00 2.69
2169 4106 3.140325 AGAGAATTTTGGGACGCTGAA 57.860 42.857 0.00 0.00 0.00 3.02
2170 4107 2.859165 AGAGAATTTTGGGACGCTGA 57.141 45.000 0.00 0.00 0.00 4.26
2171 4108 3.253188 TCAAAGAGAATTTTGGGACGCTG 59.747 43.478 0.00 0.00 38.33 5.18
2172 4109 3.253432 GTCAAAGAGAATTTTGGGACGCT 59.747 43.478 0.00 0.00 38.33 5.07
2173 4110 3.253432 AGTCAAAGAGAATTTTGGGACGC 59.747 43.478 0.00 0.00 38.33 5.19
2174 4111 6.149474 ACATAGTCAAAGAGAATTTTGGGACG 59.851 38.462 0.00 0.00 38.33 4.79
2175 4112 7.454260 ACATAGTCAAAGAGAATTTTGGGAC 57.546 36.000 0.00 0.00 38.33 4.46
2176 4113 7.039784 CCAACATAGTCAAAGAGAATTTTGGGA 60.040 37.037 0.00 0.00 38.33 4.37
2177 4114 7.092716 CCAACATAGTCAAAGAGAATTTTGGG 58.907 38.462 0.00 0.00 38.33 4.12
2178 4115 7.092716 CCCAACATAGTCAAAGAGAATTTTGG 58.907 38.462 0.00 0.00 38.33 3.28
2179 4116 7.039784 TCCCCAACATAGTCAAAGAGAATTTTG 60.040 37.037 0.00 0.00 38.97 2.44
2180 4117 7.010160 TCCCCAACATAGTCAAAGAGAATTTT 58.990 34.615 0.00 0.00 0.00 1.82
2181 4118 6.552008 TCCCCAACATAGTCAAAGAGAATTT 58.448 36.000 0.00 0.00 0.00 1.82
2182 4119 6.139679 TCCCCAACATAGTCAAAGAGAATT 57.860 37.500 0.00 0.00 0.00 2.17
2183 4120 5.779241 TCCCCAACATAGTCAAAGAGAAT 57.221 39.130 0.00 0.00 0.00 2.40
2184 4121 5.576563 TTCCCCAACATAGTCAAAGAGAA 57.423 39.130 0.00 0.00 0.00 2.87
2185 4122 5.339200 GGATTCCCCAACATAGTCAAAGAGA 60.339 44.000 0.00 0.00 34.14 3.10
2186 4123 4.884164 GGATTCCCCAACATAGTCAAAGAG 59.116 45.833 0.00 0.00 34.14 2.85
2187 4124 4.290985 TGGATTCCCCAACATAGTCAAAGA 59.709 41.667 0.00 0.00 43.29 2.52
2188 4125 4.599041 TGGATTCCCCAACATAGTCAAAG 58.401 43.478 0.00 0.00 43.29 2.77
2189 4126 4.044065 ACTGGATTCCCCAACATAGTCAAA 59.956 41.667 0.00 0.00 46.07 2.69
2190 4127 3.591527 ACTGGATTCCCCAACATAGTCAA 59.408 43.478 0.00 0.00 46.07 3.18
2191 4128 3.189606 ACTGGATTCCCCAACATAGTCA 58.810 45.455 0.00 0.00 46.07 3.41
2192 4129 3.933861 ACTGGATTCCCCAACATAGTC 57.066 47.619 0.00 0.00 46.07 2.59
2193 4130 5.994416 ATTACTGGATTCCCCAACATAGT 57.006 39.130 0.00 0.00 46.07 2.12
2194 4131 7.660030 AAAATTACTGGATTCCCCAACATAG 57.340 36.000 0.00 0.00 46.07 2.23
2195 4132 9.548631 TTTAAAATTACTGGATTCCCCAACATA 57.451 29.630 0.00 0.00 46.07 2.29
2196 4133 8.442660 TTTAAAATTACTGGATTCCCCAACAT 57.557 30.769 0.00 0.00 46.07 2.71
2197 4134 7.857404 TTTAAAATTACTGGATTCCCCAACA 57.143 32.000 0.00 0.00 46.07 3.33
2222 4159 5.403246 TCTTGTGTGTGTGCGTAAATTTTT 58.597 33.333 0.00 0.00 0.00 1.94
2223 4160 4.987832 TCTTGTGTGTGTGCGTAAATTTT 58.012 34.783 0.00 0.00 0.00 1.82
2224 4161 4.624336 TCTTGTGTGTGTGCGTAAATTT 57.376 36.364 0.00 0.00 0.00 1.82
2225 4162 4.274705 TGATCTTGTGTGTGTGCGTAAATT 59.725 37.500 0.00 0.00 0.00 1.82
2226 4163 3.812609 TGATCTTGTGTGTGTGCGTAAAT 59.187 39.130 0.00 0.00 0.00 1.40
2227 4164 3.198872 TGATCTTGTGTGTGTGCGTAAA 58.801 40.909 0.00 0.00 0.00 2.01
2228 4165 2.827652 TGATCTTGTGTGTGTGCGTAA 58.172 42.857 0.00 0.00 0.00 3.18
2229 4166 2.517650 TGATCTTGTGTGTGTGCGTA 57.482 45.000 0.00 0.00 0.00 4.42
2230 4167 1.532437 CATGATCTTGTGTGTGTGCGT 59.468 47.619 0.44 0.00 0.00 5.24
2231 4168 1.135888 CCATGATCTTGTGTGTGTGCG 60.136 52.381 7.73 0.00 0.00 5.34
2232 4169 1.881973 ACCATGATCTTGTGTGTGTGC 59.118 47.619 7.73 0.00 0.00 4.57
2233 4170 3.140623 TCACCATGATCTTGTGTGTGTG 58.859 45.455 19.89 14.47 0.00 3.82
2234 4171 3.490439 TCACCATGATCTTGTGTGTGT 57.510 42.857 19.89 6.09 0.00 3.72
2235 4172 3.754850 ACATCACCATGATCTTGTGTGTG 59.245 43.478 19.89 18.69 34.28 3.82
2236 4173 3.754850 CACATCACCATGATCTTGTGTGT 59.245 43.478 19.89 14.71 34.28 3.72
2237 4174 3.754850 ACACATCACCATGATCTTGTGTG 59.245 43.478 19.81 19.81 42.84 3.82
2238 4175 4.025040 ACACATCACCATGATCTTGTGT 57.975 40.909 14.62 14.62 40.94 3.72
2239 4176 4.034858 GCTACACATCACCATGATCTTGTG 59.965 45.833 13.67 13.67 39.49 3.33
2240 4177 4.194640 GCTACACATCACCATGATCTTGT 58.805 43.478 7.73 7.43 34.28 3.16
2241 4178 4.193865 TGCTACACATCACCATGATCTTG 58.806 43.478 0.00 1.60 34.28 3.02
2242 4179 4.492494 TGCTACACATCACCATGATCTT 57.508 40.909 0.00 0.00 34.28 2.40
2243 4180 4.194640 GTTGCTACACATCACCATGATCT 58.805 43.478 0.00 0.00 34.28 2.75
2244 4181 3.001634 CGTTGCTACACATCACCATGATC 59.998 47.826 0.00 0.00 34.28 2.92
2245 4182 2.938451 CGTTGCTACACATCACCATGAT 59.062 45.455 0.00 0.00 37.65 2.45
2246 4183 2.028567 TCGTTGCTACACATCACCATGA 60.029 45.455 0.00 0.00 33.72 3.07
2247 4184 2.345876 TCGTTGCTACACATCACCATG 58.654 47.619 0.00 0.00 35.92 3.66
2248 4185 2.233676 TCTCGTTGCTACACATCACCAT 59.766 45.455 0.00 0.00 0.00 3.55
2249 4186 1.616374 TCTCGTTGCTACACATCACCA 59.384 47.619 0.00 0.00 0.00 4.17
2250 4187 2.263077 CTCTCGTTGCTACACATCACC 58.737 52.381 0.00 0.00 0.00 4.02
2251 4188 2.263077 CCTCTCGTTGCTACACATCAC 58.737 52.381 0.00 0.00 0.00 3.06
2252 4189 1.204704 CCCTCTCGTTGCTACACATCA 59.795 52.381 0.00 0.00 0.00 3.07
2253 4190 1.471676 CCCCTCTCGTTGCTACACATC 60.472 57.143 0.00 0.00 0.00 3.06
2254 4191 0.537188 CCCCTCTCGTTGCTACACAT 59.463 55.000 0.00 0.00 0.00 3.21
2255 4192 0.541063 TCCCCTCTCGTTGCTACACA 60.541 55.000 0.00 0.00 0.00 3.72
2256 4193 0.173708 CTCCCCTCTCGTTGCTACAC 59.826 60.000 0.00 0.00 0.00 2.90
2257 4194 0.251653 ACTCCCCTCTCGTTGCTACA 60.252 55.000 0.00 0.00 0.00 2.74
2258 4195 0.173708 CACTCCCCTCTCGTTGCTAC 59.826 60.000 0.00 0.00 0.00 3.58
2259 4196 0.251653 ACACTCCCCTCTCGTTGCTA 60.252 55.000 0.00 0.00 0.00 3.49
2260 4197 0.251653 TACACTCCCCTCTCGTTGCT 60.252 55.000 0.00 0.00 0.00 3.91
2261 4198 0.824759 ATACACTCCCCTCTCGTTGC 59.175 55.000 0.00 0.00 0.00 4.17
2262 4199 1.065701 CGATACACTCCCCTCTCGTTG 59.934 57.143 0.00 0.00 0.00 4.10
2263 4200 1.340795 ACGATACACTCCCCTCTCGTT 60.341 52.381 0.00 0.00 36.04 3.85
2264 4201 0.255318 ACGATACACTCCCCTCTCGT 59.745 55.000 0.00 0.00 34.80 4.18
2265 4202 0.945813 GACGATACACTCCCCTCTCG 59.054 60.000 0.00 0.00 0.00 4.04
2266 4203 2.351706 AGACGATACACTCCCCTCTC 57.648 55.000 0.00 0.00 0.00 3.20
2267 4204 5.782677 ATATAGACGATACACTCCCCTCT 57.217 43.478 0.00 0.00 0.00 3.69
2268 4205 7.994334 AGAATATATAGACGATACACTCCCCTC 59.006 40.741 0.00 0.00 0.00 4.30
2269 4206 7.874252 AGAATATATAGACGATACACTCCCCT 58.126 38.462 0.00 0.00 0.00 4.79
2270 4207 8.407064 CAAGAATATATAGACGATACACTCCCC 58.593 40.741 0.00 0.00 0.00 4.81
2271 4208 8.958506 ACAAGAATATATAGACGATACACTCCC 58.041 37.037 0.00 0.00 0.00 4.30
2278 4215 9.881649 ACGGTCTACAAGAATATATAGACGATA 57.118 33.333 0.00 0.00 42.93 2.92
2279 4216 8.789825 ACGGTCTACAAGAATATATAGACGAT 57.210 34.615 0.00 0.00 42.93 3.73
2280 4217 9.710900 TTACGGTCTACAAGAATATATAGACGA 57.289 33.333 0.00 0.00 42.93 4.20
2281 4218 9.970243 CTTACGGTCTACAAGAATATATAGACG 57.030 37.037 0.00 0.00 42.93 4.18
2282 4219 9.771915 GCTTACGGTCTACAAGAATATATAGAC 57.228 37.037 0.00 0.00 41.81 2.59
2283 4220 8.663025 CGCTTACGGTCTACAAGAATATATAGA 58.337 37.037 0.00 0.00 34.97 1.98
2284 4221 8.823584 CGCTTACGGTCTACAAGAATATATAG 57.176 38.462 0.00 0.00 34.97 1.31
2302 4239 1.254570 GTCATAACGCTTCCGCTTACG 59.745 52.381 0.00 0.00 38.22 3.18
2303 4240 2.264813 TGTCATAACGCTTCCGCTTAC 58.735 47.619 0.00 0.00 38.22 2.34
2304 4241 2.658373 TGTCATAACGCTTCCGCTTA 57.342 45.000 0.00 0.00 38.22 3.09
2305 4242 1.463444 GTTGTCATAACGCTTCCGCTT 59.537 47.619 0.00 0.00 38.22 4.68
2306 4243 1.076332 GTTGTCATAACGCTTCCGCT 58.924 50.000 0.00 0.00 38.22 5.52
2307 4244 0.247145 CGTTGTCATAACGCTTCCGC 60.247 55.000 0.00 0.00 36.82 5.54
2308 4245 3.850207 CGTTGTCATAACGCTTCCG 57.150 52.632 0.00 0.00 36.82 4.30
2314 4251 2.563670 TCAAACGCGTTGTCATAACG 57.436 45.000 27.34 1.71 45.56 3.18
2315 4252 3.805823 ACATCAAACGCGTTGTCATAAC 58.194 40.909 27.34 0.00 38.47 1.89
2316 4253 4.687018 ACTACATCAAACGCGTTGTCATAA 59.313 37.500 27.34 9.53 38.47 1.90
2317 4254 4.239304 ACTACATCAAACGCGTTGTCATA 58.761 39.130 27.34 13.24 38.47 2.15
2318 4255 3.064207 ACTACATCAAACGCGTTGTCAT 58.936 40.909 27.34 14.56 38.47 3.06
2319 4256 2.473609 GACTACATCAAACGCGTTGTCA 59.526 45.455 27.34 12.75 38.47 3.58
2320 4257 2.470140 CGACTACATCAAACGCGTTGTC 60.470 50.000 27.34 22.94 38.47 3.18
2321 4258 1.454276 CGACTACATCAAACGCGTTGT 59.546 47.619 27.34 21.68 38.47 3.32
2322 4259 1.454276 ACGACTACATCAAACGCGTTG 59.546 47.619 27.34 16.51 38.71 4.10
2323 4260 1.774639 ACGACTACATCAAACGCGTT 58.225 45.000 20.79 20.79 0.00 4.84
2324 4261 2.245096 GTACGACTACATCAAACGCGT 58.755 47.619 5.58 5.58 0.00 6.01
2325 4262 1.248489 CGTACGACTACATCAAACGCG 59.752 52.381 10.44 3.53 30.92 6.01
2326 4263 2.245096 ACGTACGACTACATCAAACGC 58.755 47.619 24.41 0.00 38.20 4.84
2327 4264 3.740590 AGACGTACGACTACATCAAACG 58.259 45.455 24.41 0.00 39.70 3.60
2328 4265 5.058977 GTGAAGACGTACGACTACATCAAAC 59.941 44.000 24.41 7.39 0.00 2.93
2329 4266 5.149273 GTGAAGACGTACGACTACATCAAA 58.851 41.667 24.41 0.00 0.00 2.69
2330 4267 4.667415 CGTGAAGACGTACGACTACATCAA 60.667 45.833 24.41 4.49 42.54 2.57
2331 4268 3.181527 CGTGAAGACGTACGACTACATCA 60.182 47.826 24.41 18.00 42.54 3.07
2332 4269 3.061295 TCGTGAAGACGTACGACTACATC 59.939 47.826 24.41 15.62 46.20 3.06
2333 4270 2.995939 TCGTGAAGACGTACGACTACAT 59.004 45.455 24.41 6.17 46.20 2.29
2334 4271 2.403259 TCGTGAAGACGTACGACTACA 58.597 47.619 24.41 13.28 46.20 2.74
2340 4277 1.060266 AGTCGATCGTGAAGACGTACG 59.940 52.381 15.01 15.01 46.20 3.67
2341 4278 2.093310 TCAGTCGATCGTGAAGACGTAC 59.907 50.000 15.94 2.21 46.20 3.67
2342 4279 2.340337 TCAGTCGATCGTGAAGACGTA 58.660 47.619 15.94 0.00 46.20 3.57
2343 4280 1.154197 TCAGTCGATCGTGAAGACGT 58.846 50.000 15.94 0.00 46.20 4.34
2353 4290 3.661944 TCGGTACTAGGATCAGTCGATC 58.338 50.000 0.00 0.00 46.34 3.69
2354 4291 3.766068 TCGGTACTAGGATCAGTCGAT 57.234 47.619 0.00 0.00 33.31 3.59
2355 4292 3.548745 TTCGGTACTAGGATCAGTCGA 57.451 47.619 0.00 0.00 0.00 4.20
2356 4293 3.564644 ACATTCGGTACTAGGATCAGTCG 59.435 47.826 0.00 0.00 0.00 4.18
2372 4309 4.104143 GGAGGTGCCGTACATTCG 57.896 61.111 0.00 0.00 0.00 3.34
2382 4319 4.819761 TGCAGATCGCGGAGGTGC 62.820 66.667 6.13 11.38 46.97 5.01
2383 4320 2.887568 GTGCAGATCGCGGAGGTG 60.888 66.667 6.13 0.00 46.97 4.00
2384 4321 3.381983 TGTGCAGATCGCGGAGGT 61.382 61.111 6.13 0.00 46.97 3.85
2385 4322 2.887568 GTGTGCAGATCGCGGAGG 60.888 66.667 6.13 0.00 46.97 4.30
2386 4323 1.086067 AATGTGTGCAGATCGCGGAG 61.086 55.000 6.13 0.00 46.97 4.63
2387 4324 1.079197 AATGTGTGCAGATCGCGGA 60.079 52.632 6.13 0.00 46.97 5.54
2388 4325 1.349627 GAATGTGTGCAGATCGCGG 59.650 57.895 6.13 0.00 46.97 6.46
2389 4326 0.025898 CTGAATGTGTGCAGATCGCG 59.974 55.000 0.00 0.00 46.97 5.87
2390 4327 0.247974 GCTGAATGTGTGCAGATCGC 60.248 55.000 0.00 3.07 42.89 4.58
2391 4328 1.326852 GAGCTGAATGTGTGCAGATCG 59.673 52.381 0.00 0.00 37.73 3.69
2392 4329 1.326852 CGAGCTGAATGTGTGCAGATC 59.673 52.381 0.00 0.00 42.42 2.75
2393 4330 1.066645 TCGAGCTGAATGTGTGCAGAT 60.067 47.619 0.00 0.00 34.06 2.90
2394 4331 0.318120 TCGAGCTGAATGTGTGCAGA 59.682 50.000 0.00 0.00 34.06 4.26
2395 4332 1.062148 CATCGAGCTGAATGTGTGCAG 59.938 52.381 0.00 0.00 35.28 4.41
2396 4333 1.081094 CATCGAGCTGAATGTGTGCA 58.919 50.000 0.00 0.00 0.00 4.57
2397 4334 1.061711 GTCATCGAGCTGAATGTGTGC 59.938 52.381 0.00 0.00 0.00 4.57
2398 4335 1.322637 CGTCATCGAGCTGAATGTGTG 59.677 52.381 0.00 0.00 39.71 3.82
2399 4336 1.067565 ACGTCATCGAGCTGAATGTGT 60.068 47.619 0.00 0.00 40.62 3.72
2400 4337 1.585668 GACGTCATCGAGCTGAATGTG 59.414 52.381 11.55 0.00 40.62 3.21
2401 4338 1.469940 GGACGTCATCGAGCTGAATGT 60.470 52.381 18.91 0.00 40.62 2.71
2402 4339 1.203928 GGACGTCATCGAGCTGAATG 58.796 55.000 18.91 0.00 40.62 2.67
2403 4340 0.103208 GGGACGTCATCGAGCTGAAT 59.897 55.000 18.91 0.00 40.62 2.57
2404 4341 1.511305 GGGACGTCATCGAGCTGAA 59.489 57.895 18.91 0.00 40.62 3.02
2405 4342 3.197614 GGGACGTCATCGAGCTGA 58.802 61.111 18.91 0.00 40.62 4.26
2418 4355 1.359459 GGATCGTGAGTTTGCGGGAC 61.359 60.000 0.00 0.00 0.00 4.46
2419 4356 1.079405 GGATCGTGAGTTTGCGGGA 60.079 57.895 0.00 0.00 0.00 5.14
2420 4357 1.361668 CTGGATCGTGAGTTTGCGGG 61.362 60.000 0.00 0.00 0.00 6.13
2421 4358 0.670546 ACTGGATCGTGAGTTTGCGG 60.671 55.000 0.00 0.00 0.00 5.69
2422 4359 1.920574 CTACTGGATCGTGAGTTTGCG 59.079 52.381 0.00 0.00 0.00 4.85
2423 4360 3.182967 CTCTACTGGATCGTGAGTTTGC 58.817 50.000 0.00 0.00 0.00 3.68
2424 4361 3.119316 AGCTCTACTGGATCGTGAGTTTG 60.119 47.826 0.00 0.00 0.00 2.93
2425 4362 3.093057 AGCTCTACTGGATCGTGAGTTT 58.907 45.455 0.00 0.00 0.00 2.66
2426 4363 2.729194 AGCTCTACTGGATCGTGAGTT 58.271 47.619 0.00 0.00 0.00 3.01
2427 4364 2.428544 AGCTCTACTGGATCGTGAGT 57.571 50.000 0.00 0.00 0.00 3.41
2428 4365 2.286713 CGAAGCTCTACTGGATCGTGAG 60.287 54.545 0.00 0.00 0.00 3.51
2429 4366 1.671328 CGAAGCTCTACTGGATCGTGA 59.329 52.381 0.00 0.00 0.00 4.35
2430 4367 1.402259 ACGAAGCTCTACTGGATCGTG 59.598 52.381 5.11 0.00 41.41 4.35
2431 4368 1.402259 CACGAAGCTCTACTGGATCGT 59.598 52.381 0.19 0.19 43.48 3.73
2432 4369 1.268794 CCACGAAGCTCTACTGGATCG 60.269 57.143 0.00 0.00 36.45 3.69
2433 4370 1.067821 CCCACGAAGCTCTACTGGATC 59.932 57.143 0.00 0.00 0.00 3.36
2434 4371 1.115467 CCCACGAAGCTCTACTGGAT 58.885 55.000 0.00 0.00 0.00 3.41
2435 4372 0.039180 TCCCACGAAGCTCTACTGGA 59.961 55.000 0.00 0.00 0.00 3.86
2436 4373 0.457851 CTCCCACGAAGCTCTACTGG 59.542 60.000 0.00 0.00 0.00 4.00
2437 4374 1.403679 CTCTCCCACGAAGCTCTACTG 59.596 57.143 0.00 0.00 0.00 2.74
2438 4375 1.004979 ACTCTCCCACGAAGCTCTACT 59.995 52.381 0.00 0.00 0.00 2.57
2439 4376 1.465794 ACTCTCCCACGAAGCTCTAC 58.534 55.000 0.00 0.00 0.00 2.59
2440 4377 2.217510 AACTCTCCCACGAAGCTCTA 57.782 50.000 0.00 0.00 0.00 2.43
2441 4378 1.273886 GAAACTCTCCCACGAAGCTCT 59.726 52.381 0.00 0.00 0.00 4.09
2442 4379 1.715993 GAAACTCTCCCACGAAGCTC 58.284 55.000 0.00 0.00 0.00 4.09
2443 4380 0.038159 CGAAACTCTCCCACGAAGCT 60.038 55.000 0.00 0.00 0.00 3.74
2444 4381 0.319641 ACGAAACTCTCCCACGAAGC 60.320 55.000 0.00 0.00 0.00 3.86
2445 4382 1.000607 TGACGAAACTCTCCCACGAAG 60.001 52.381 0.00 0.00 0.00 3.79
2446 4383 1.000607 CTGACGAAACTCTCCCACGAA 60.001 52.381 0.00 0.00 0.00 3.85
2447 4384 0.596577 CTGACGAAACTCTCCCACGA 59.403 55.000 0.00 0.00 0.00 4.35
2448 4385 1.009389 GCTGACGAAACTCTCCCACG 61.009 60.000 0.00 0.00 0.00 4.94
2449 4386 0.033504 TGCTGACGAAACTCTCCCAC 59.966 55.000 0.00 0.00 0.00 4.61
2450 4387 0.033504 GTGCTGACGAAACTCTCCCA 59.966 55.000 0.00 0.00 0.00 4.37
2451 4388 2.828933 GTGCTGACGAAACTCTCCC 58.171 57.895 0.00 0.00 0.00 4.30
2469 4406 4.771356 ACCGTCATCACGCCGTCG 62.771 66.667 0.00 0.00 45.29 5.12
2470 4407 2.884087 ATCACCGTCATCACGCCGTC 62.884 60.000 0.00 0.00 45.29 4.79
2471 4408 3.001902 ATCACCGTCATCACGCCGT 62.002 57.895 0.00 0.00 45.29 5.68
2472 4409 2.202743 ATCACCGTCATCACGCCG 60.203 61.111 0.00 0.00 45.29 6.46
2473 4410 0.530650 ATCATCACCGTCATCACGCC 60.531 55.000 0.00 0.00 45.29 5.68
2474 4411 0.578683 CATCATCACCGTCATCACGC 59.421 55.000 0.00 0.00 45.29 5.34
2475 4412 1.926561 ACATCATCACCGTCATCACG 58.073 50.000 0.00 0.00 46.29 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.