Multiple sequence alignment - TraesCS3A01G052200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G052200 chr3A 100.000 2339 0 0 1 2339 27799258 27796920 0.000000e+00 4320.0
1 TraesCS3A01G052200 chr3A 84.631 488 45 19 787 1246 27766610 27766125 2.120000e-125 459.0
2 TraesCS3A01G052200 chr3A 84.490 245 16 11 1509 1737 28163245 28163007 3.030000e-54 222.0
3 TraesCS3A01G052200 chr3A 85.811 148 12 6 1573 1720 27765836 27765698 5.210000e-32 148.0
4 TraesCS3A01G052200 chr3A 78.947 190 30 5 1153 1339 28371220 28371038 1.140000e-23 121.0
5 TraesCS3A01G052200 chr3A 77.637 237 24 15 1112 1339 28322492 28322276 1.470000e-22 117.0
6 TraesCS3A01G052200 chr3A 75.347 288 46 10 1146 1423 28231095 28230823 5.280000e-22 115.0
7 TraesCS3A01G052200 chr3A 100.000 43 0 0 1250 1292 28423575 28423533 1.930000e-11 80.5
8 TraesCS3A01G052200 chr3A 88.136 59 4 1 1261 1316 27909266 27909208 1.500000e-07 67.6
9 TraesCS3A01G052200 chr5A 94.074 405 23 1 1934 2337 130313758 130313354 4.270000e-172 614.0
10 TraesCS3A01G052200 chr5A 90.220 409 39 1 1932 2339 602045163 602044755 1.230000e-147 532.0
11 TraesCS3A01G052200 chr7B 92.537 402 29 1 1934 2334 594132364 594132765 2.020000e-160 575.0
12 TraesCS3A01G052200 chr7B 91.791 402 29 4 1934 2334 610641075 610641473 7.300000e-155 556.0
13 TraesCS3A01G052200 chr4B 91.687 409 32 2 1933 2339 606907371 606906963 1.210000e-157 566.0
14 TraesCS3A01G052200 chr4B 91.400 407 32 2 1934 2339 658554709 658555113 2.630000e-154 555.0
15 TraesCS3A01G052200 chr4B 90.954 409 36 1 1932 2339 11620252 11620660 1.220000e-152 549.0
16 TraesCS3A01G052200 chr4B 90.370 405 38 1 1936 2339 267659128 267659532 4.430000e-147 531.0
17 TraesCS3A01G052200 chr4D 89.614 414 38 5 1931 2339 436862543 436862130 2.660000e-144 521.0
18 TraesCS3A01G052200 chr3D 76.682 1055 115 58 742 1733 20041078 20040092 4.550000e-127 464.0
19 TraesCS3A01G052200 chr3D 86.175 434 34 15 1382 1799 20141841 20141418 1.650000e-121 446.0
20 TraesCS3A01G052200 chr3D 81.836 523 44 25 772 1276 20018107 20017618 2.180000e-105 392.0
21 TraesCS3A01G052200 chr3D 78.768 617 52 34 742 1303 20142454 20141862 8.010000e-90 340.0
22 TraesCS3A01G052200 chr3D 74.643 1049 120 67 754 1759 20106517 20105572 1.730000e-86 329.0
23 TraesCS3A01G052200 chr3D 89.286 252 23 4 265 513 20018603 20018353 1.750000e-81 313.0
24 TraesCS3A01G052200 chr3D 89.313 131 12 2 354 482 20106968 20106838 1.860000e-36 163.0
25 TraesCS3A01G052200 chr3D 78.818 203 27 9 1146 1339 20708074 20707879 3.160000e-24 122.0
26 TraesCS3A01G052200 chr3D 88.136 59 4 1 1261 1316 20232558 20232500 1.500000e-07 67.6
27 TraesCS3A01G052200 chr3B 82.187 567 60 23 742 1276 32500752 32500195 1.270000e-122 449.0
28 TraesCS3A01G052200 chr3B 82.187 567 60 23 742 1276 32508636 32508079 1.270000e-122 449.0
29 TraesCS3A01G052200 chr3B 82.187 567 60 23 742 1276 32512654 32512097 1.270000e-122 449.0
30 TraesCS3A01G052200 chr3B 81.834 567 62 23 742 1276 32569662 32569105 2.760000e-119 438.0
31 TraesCS3A01G052200 chr3B 78.627 641 61 49 742 1339 32596930 32596323 2.860000e-94 355.0
32 TraesCS3A01G052200 chr3B 78.605 631 62 40 742 1339 32539781 32539191 1.330000e-92 350.0
33 TraesCS3A01G052200 chr3B 92.609 230 13 1 888 1117 32726214 32725989 6.230000e-86 327.0
34 TraesCS3A01G052200 chr3B 77.476 515 63 29 801 1282 32462332 32461838 2.310000e-65 259.0
35 TraesCS3A01G052200 chr3B 83.951 243 32 5 305 542 32467069 32466829 2.340000e-55 226.0
36 TraesCS3A01G052200 chr3B 83.951 243 32 5 305 542 32544443 32544203 2.340000e-55 226.0
37 TraesCS3A01G052200 chr3B 84.080 201 28 3 309 507 32713941 32713743 8.530000e-45 191.0
38 TraesCS3A01G052200 chr3B 78.112 233 34 9 1112 1339 33298819 33298599 5.240000e-27 132.0
39 TraesCS3A01G052200 chr3B 80.120 166 27 2 1151 1316 33333872 33333713 4.080000e-23 119.0
40 TraesCS3A01G052200 chr7A 86.000 250 27 5 1 248 731738565 731738808 6.410000e-66 261.0
41 TraesCS3A01G052200 chr1B 86.667 240 25 3 28 263 655905514 655905278 2.310000e-65 259.0
42 TraesCS3A01G052200 chr2A 84.351 262 33 5 1 260 769062720 769062975 1.390000e-62 250.0
43 TraesCS3A01G052200 chrUn 85.185 189 23 4 359 542 479250691 479250879 3.070000e-44 189.0
44 TraesCS3A01G052200 chr5D 90.435 115 11 0 101 215 335759270 335759384 4.030000e-33 152.0
45 TraesCS3A01G052200 chr5B 87.719 114 10 2 154 267 383035155 383035046 1.890000e-26 130.0
46 TraesCS3A01G052200 chr5B 81.065 169 18 5 92 260 393584596 393584750 3.160000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G052200 chr3A 27796920 27799258 2338 True 4320.0 4320 100.0000 1 2339 1 chr3A.!!$R1 2338
1 TraesCS3A01G052200 chr3A 27765698 27766610 912 True 303.5 459 85.2210 787 1720 2 chr3A.!!$R8 933
2 TraesCS3A01G052200 chr3D 20040092 20041078 986 True 464.0 464 76.6820 742 1733 1 chr3D.!!$R1 991
3 TraesCS3A01G052200 chr3D 20141418 20142454 1036 True 393.0 446 82.4715 742 1799 2 chr3D.!!$R6 1057
4 TraesCS3A01G052200 chr3D 20017618 20018603 985 True 352.5 392 85.5610 265 1276 2 chr3D.!!$R4 1011
5 TraesCS3A01G052200 chr3D 20105572 20106968 1396 True 246.0 329 81.9780 354 1759 2 chr3D.!!$R5 1405
6 TraesCS3A01G052200 chr3B 32500195 32500752 557 True 449.0 449 82.1870 742 1276 1 chr3B.!!$R3 534
7 TraesCS3A01G052200 chr3B 32508079 32512654 4575 True 449.0 449 82.1870 742 1276 2 chr3B.!!$R12 534
8 TraesCS3A01G052200 chr3B 32569105 32569662 557 True 438.0 438 81.8340 742 1276 1 chr3B.!!$R6 534
9 TraesCS3A01G052200 chr3B 32596323 32596930 607 True 355.0 355 78.6270 742 1339 1 chr3B.!!$R7 597
10 TraesCS3A01G052200 chr3B 32539191 32539781 590 True 350.0 350 78.6050 742 1339 1 chr3B.!!$R4 597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
699 733 0.110056 CCGCAAACAGCAACAGCTAG 60.11 55.0 0.0 0.0 46.13 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2205 5764 0.033405 TAAGGAGGAGGACAGGGACG 60.033 60.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.942872 CAACAAGCTAGAACTTTATGTGGG 58.057 41.667 0.00 0.00 0.00 4.61
24 25 4.010349 ACAAGCTAGAACTTTATGTGGGC 58.990 43.478 0.00 0.00 0.00 5.36
25 26 4.263506 ACAAGCTAGAACTTTATGTGGGCT 60.264 41.667 0.00 0.00 0.00 5.19
26 27 4.576330 AGCTAGAACTTTATGTGGGCTT 57.424 40.909 0.00 0.00 0.00 4.35
27 28 5.693769 AGCTAGAACTTTATGTGGGCTTA 57.306 39.130 0.00 0.00 0.00 3.09
28 29 5.675538 AGCTAGAACTTTATGTGGGCTTAG 58.324 41.667 0.00 0.00 0.00 2.18
29 30 5.425539 AGCTAGAACTTTATGTGGGCTTAGA 59.574 40.000 0.00 0.00 0.00 2.10
30 31 6.100424 AGCTAGAACTTTATGTGGGCTTAGAT 59.900 38.462 0.00 0.00 0.00 1.98
31 32 6.203723 GCTAGAACTTTATGTGGGCTTAGATG 59.796 42.308 0.00 0.00 0.00 2.90
32 33 6.067217 AGAACTTTATGTGGGCTTAGATGT 57.933 37.500 0.00 0.00 0.00 3.06
33 34 5.882557 AGAACTTTATGTGGGCTTAGATGTG 59.117 40.000 0.00 0.00 0.00 3.21
34 35 4.526970 ACTTTATGTGGGCTTAGATGTGG 58.473 43.478 0.00 0.00 0.00 4.17
35 36 2.638480 TATGTGGGCTTAGATGTGGC 57.362 50.000 0.00 0.00 0.00 5.01
36 37 0.625316 ATGTGGGCTTAGATGTGGCA 59.375 50.000 0.00 0.00 0.00 4.92
37 38 0.403655 TGTGGGCTTAGATGTGGCAA 59.596 50.000 0.00 0.00 0.00 4.52
38 39 0.811281 GTGGGCTTAGATGTGGCAAC 59.189 55.000 0.00 0.00 0.00 4.17
39 40 0.698238 TGGGCTTAGATGTGGCAACT 59.302 50.000 0.00 0.00 37.61 3.16
40 41 1.098050 GGGCTTAGATGTGGCAACTG 58.902 55.000 0.00 0.00 37.61 3.16
41 42 1.614317 GGGCTTAGATGTGGCAACTGT 60.614 52.381 0.00 0.00 37.61 3.55
42 43 1.470098 GGCTTAGATGTGGCAACTGTG 59.530 52.381 0.00 0.00 37.61 3.66
57 58 5.039480 CAACTGTGCTCAAATGTAAGGAG 57.961 43.478 0.00 0.00 0.00 3.69
58 59 4.357918 ACTGTGCTCAAATGTAAGGAGT 57.642 40.909 0.00 0.00 0.00 3.85
59 60 4.319177 ACTGTGCTCAAATGTAAGGAGTC 58.681 43.478 0.00 0.00 0.00 3.36
60 61 4.202357 ACTGTGCTCAAATGTAAGGAGTCA 60.202 41.667 0.00 0.00 0.00 3.41
61 62 4.318332 TGTGCTCAAATGTAAGGAGTCAG 58.682 43.478 0.00 0.00 0.00 3.51
62 63 3.126000 GTGCTCAAATGTAAGGAGTCAGC 59.874 47.826 0.00 0.00 0.00 4.26
63 64 3.244526 TGCTCAAATGTAAGGAGTCAGCA 60.245 43.478 0.00 0.00 0.00 4.41
64 65 3.753272 GCTCAAATGTAAGGAGTCAGCAA 59.247 43.478 0.00 0.00 0.00 3.91
65 66 4.397417 GCTCAAATGTAAGGAGTCAGCAAT 59.603 41.667 0.00 0.00 0.00 3.56
66 67 5.675575 GCTCAAATGTAAGGAGTCAGCAATG 60.676 44.000 0.00 0.00 0.00 2.82
67 68 4.701651 TCAAATGTAAGGAGTCAGCAATGG 59.298 41.667 0.00 0.00 0.00 3.16
68 69 4.574674 AATGTAAGGAGTCAGCAATGGA 57.425 40.909 0.00 0.00 0.00 3.41
69 70 4.785346 ATGTAAGGAGTCAGCAATGGAT 57.215 40.909 0.00 0.00 0.00 3.41
70 71 4.574674 TGTAAGGAGTCAGCAATGGATT 57.425 40.909 0.00 0.00 0.00 3.01
71 72 4.922206 TGTAAGGAGTCAGCAATGGATTT 58.078 39.130 0.00 0.00 0.00 2.17
72 73 5.324409 TGTAAGGAGTCAGCAATGGATTTT 58.676 37.500 0.00 0.00 0.00 1.82
73 74 4.796038 AAGGAGTCAGCAATGGATTTTG 57.204 40.909 0.00 0.00 0.00 2.44
80 81 2.368655 GCAATGGATTTTGCGAAGGT 57.631 45.000 0.00 0.00 42.22 3.50
81 82 2.262211 GCAATGGATTTTGCGAAGGTC 58.738 47.619 0.00 0.00 42.22 3.85
82 83 2.094545 GCAATGGATTTTGCGAAGGTCT 60.095 45.455 0.00 0.00 42.22 3.85
83 84 3.762779 CAATGGATTTTGCGAAGGTCTC 58.237 45.455 0.00 0.00 0.00 3.36
84 85 1.821216 TGGATTTTGCGAAGGTCTCC 58.179 50.000 0.00 0.00 0.00 3.71
85 86 1.351017 TGGATTTTGCGAAGGTCTCCT 59.649 47.619 0.00 0.00 33.87 3.69
86 87 2.569853 TGGATTTTGCGAAGGTCTCCTA 59.430 45.455 0.00 0.00 31.13 2.94
87 88 2.937149 GGATTTTGCGAAGGTCTCCTAC 59.063 50.000 0.00 0.00 31.13 3.18
88 89 3.596214 GATTTTGCGAAGGTCTCCTACA 58.404 45.455 0.00 0.00 31.13 2.74
89 90 2.450609 TTTGCGAAGGTCTCCTACAC 57.549 50.000 0.00 0.00 31.13 2.90
90 91 0.606604 TTGCGAAGGTCTCCTACACC 59.393 55.000 0.00 0.00 31.13 4.16
91 92 1.255667 TGCGAAGGTCTCCTACACCC 61.256 60.000 0.00 0.00 33.96 4.61
92 93 1.255667 GCGAAGGTCTCCTACACCCA 61.256 60.000 0.00 0.00 33.96 4.51
93 94 0.531200 CGAAGGTCTCCTACACCCAC 59.469 60.000 0.00 0.00 33.96 4.61
94 95 0.903236 GAAGGTCTCCTACACCCACC 59.097 60.000 0.00 0.00 33.96 4.61
95 96 0.903454 AAGGTCTCCTACACCCACCG 60.903 60.000 0.00 0.00 33.96 4.94
96 97 1.304713 GGTCTCCTACACCCACCGA 60.305 63.158 0.00 0.00 0.00 4.69
97 98 1.602327 GGTCTCCTACACCCACCGAC 61.602 65.000 0.00 0.00 0.00 4.79
98 99 0.611340 GTCTCCTACACCCACCGACT 60.611 60.000 0.00 0.00 0.00 4.18
99 100 0.323178 TCTCCTACACCCACCGACTC 60.323 60.000 0.00 0.00 0.00 3.36
100 101 1.304713 TCCTACACCCACCGACTCC 60.305 63.158 0.00 0.00 0.00 3.85
101 102 2.707849 CCTACACCCACCGACTCCG 61.708 68.421 0.00 0.00 0.00 4.63
102 103 3.352338 CTACACCCACCGACTCCGC 62.352 68.421 0.00 0.00 0.00 5.54
106 107 4.796231 CCCACCGACTCCGCGAAG 62.796 72.222 8.23 0.00 0.00 3.79
147 148 9.591792 AATGATTTAGCAAAGAAATCCTTTAGC 57.408 29.630 5.83 0.00 42.88 3.09
148 149 7.250569 TGATTTAGCAAAGAAATCCTTTAGCG 58.749 34.615 5.83 0.00 42.88 4.26
149 150 6.811253 TTTAGCAAAGAAATCCTTTAGCGA 57.189 33.333 0.00 0.00 42.88 4.93
150 151 6.811253 TTAGCAAAGAAATCCTTTAGCGAA 57.189 33.333 0.00 0.00 42.88 4.70
151 152 5.705609 AGCAAAGAAATCCTTTAGCGAAA 57.294 34.783 0.00 0.00 42.88 3.46
152 153 5.703876 AGCAAAGAAATCCTTTAGCGAAAG 58.296 37.500 11.94 11.94 42.88 2.62
153 154 5.473504 AGCAAAGAAATCCTTTAGCGAAAGA 59.526 36.000 19.51 7.27 44.23 2.52
154 155 6.016276 AGCAAAGAAATCCTTTAGCGAAAGAA 60.016 34.615 19.51 0.11 44.23 2.52
155 156 6.088217 GCAAAGAAATCCTTTAGCGAAAGAAC 59.912 38.462 19.51 6.88 44.23 3.01
156 157 7.363431 CAAAGAAATCCTTTAGCGAAAGAACT 58.637 34.615 19.51 8.68 44.23 3.01
157 158 7.511959 AAGAAATCCTTTAGCGAAAGAACTT 57.488 32.000 19.51 13.00 44.23 2.66
158 159 7.135089 AGAAATCCTTTAGCGAAAGAACTTC 57.865 36.000 19.51 16.10 44.23 3.01
159 160 6.937465 AGAAATCCTTTAGCGAAAGAACTTCT 59.063 34.615 19.51 17.64 44.23 2.85
160 161 8.095169 AGAAATCCTTTAGCGAAAGAACTTCTA 58.905 33.333 19.51 0.00 44.23 2.10
161 162 8.617290 AAATCCTTTAGCGAAAGAACTTCTAA 57.383 30.769 19.51 0.00 44.23 2.10
162 163 8.617290 AATCCTTTAGCGAAAGAACTTCTAAA 57.383 30.769 19.51 0.00 44.23 1.85
163 164 7.653767 TCCTTTAGCGAAAGAACTTCTAAAG 57.346 36.000 19.51 17.62 44.23 1.85
164 165 7.215085 TCCTTTAGCGAAAGAACTTCTAAAGT 58.785 34.615 19.51 0.00 44.23 2.66
176 177 5.584551 ACTTCTAAAGTTTGGGACTCCAT 57.415 39.130 0.00 0.00 39.04 3.41
177 178 5.316987 ACTTCTAAAGTTTGGGACTCCATG 58.683 41.667 0.00 0.00 39.04 3.66
178 179 4.993705 TCTAAAGTTTGGGACTCCATGT 57.006 40.909 0.00 0.00 43.63 3.21
179 180 5.319043 TCTAAAGTTTGGGACTCCATGTT 57.681 39.130 0.00 0.00 43.63 2.71
180 181 5.313712 TCTAAAGTTTGGGACTCCATGTTC 58.686 41.667 0.00 0.00 43.63 3.18
181 182 2.586648 AGTTTGGGACTCCATGTTCC 57.413 50.000 0.00 0.00 44.86 3.62
182 183 2.065799 AGTTTGGGACTCCATGTTCCT 58.934 47.619 0.00 0.00 44.89 3.36
183 184 2.447047 AGTTTGGGACTCCATGTTCCTT 59.553 45.455 0.00 0.00 44.89 3.36
184 185 2.558359 GTTTGGGACTCCATGTTCCTTG 59.442 50.000 0.00 0.00 44.89 3.61
185 186 1.741028 TGGGACTCCATGTTCCTTGA 58.259 50.000 0.00 0.00 44.89 3.02
186 187 2.278245 TGGGACTCCATGTTCCTTGAT 58.722 47.619 0.00 0.00 44.89 2.57
187 188 2.649312 TGGGACTCCATGTTCCTTGATT 59.351 45.455 0.00 0.00 44.89 2.57
188 189 3.075882 TGGGACTCCATGTTCCTTGATTT 59.924 43.478 0.00 0.00 44.89 2.17
189 190 4.089361 GGGACTCCATGTTCCTTGATTTT 58.911 43.478 0.00 0.00 41.27 1.82
190 191 5.222233 TGGGACTCCATGTTCCTTGATTTTA 60.222 40.000 0.00 0.00 44.89 1.52
191 192 5.893824 GGGACTCCATGTTCCTTGATTTTAT 59.106 40.000 0.00 0.00 41.27 1.40
192 193 6.381133 GGGACTCCATGTTCCTTGATTTTATT 59.619 38.462 0.00 0.00 41.27 1.40
193 194 7.093333 GGGACTCCATGTTCCTTGATTTTATTT 60.093 37.037 0.00 0.00 41.27 1.40
194 195 7.976175 GGACTCCATGTTCCTTGATTTTATTTC 59.024 37.037 0.00 0.00 0.00 2.17
195 196 8.655935 ACTCCATGTTCCTTGATTTTATTTCT 57.344 30.769 0.00 0.00 0.00 2.52
196 197 9.093458 ACTCCATGTTCCTTGATTTTATTTCTT 57.907 29.630 0.00 0.00 0.00 2.52
203 204 9.817809 GTTCCTTGATTTTATTTCTTATTCCCC 57.182 33.333 0.00 0.00 0.00 4.81
204 205 9.782900 TTCCTTGATTTTATTTCTTATTCCCCT 57.217 29.630 0.00 0.00 0.00 4.79
205 206 9.200817 TCCTTGATTTTATTTCTTATTCCCCTG 57.799 33.333 0.00 0.00 0.00 4.45
206 207 8.981659 CCTTGATTTTATTTCTTATTCCCCTGT 58.018 33.333 0.00 0.00 0.00 4.00
217 218 9.831682 TTTCTTATTCCCCTGTAAATAACCTTT 57.168 29.630 0.00 0.00 0.00 3.11
218 219 9.831682 TTCTTATTCCCCTGTAAATAACCTTTT 57.168 29.630 0.00 0.00 0.00 2.27
219 220 9.831682 TCTTATTCCCCTGTAAATAACCTTTTT 57.168 29.630 0.00 0.00 0.00 1.94
254 255 9.850628 CTGAGAAATAAAATCTTGATGCTTTCA 57.149 29.630 0.00 0.00 0.00 2.69
255 256 9.850628 TGAGAAATAAAATCTTGATGCTTTCAG 57.149 29.630 0.00 0.00 35.27 3.02
263 264 9.603921 AAAATCTTGATGCTTTCAGAAAAAGAA 57.396 25.926 9.87 0.00 35.27 2.52
287 288 5.539955 ACTTAACAACATTCAGCCCTCATTT 59.460 36.000 0.00 0.00 0.00 2.32
297 298 6.933514 TTCAGCCCTCATTTAATTTTCCTT 57.066 33.333 0.00 0.00 0.00 3.36
299 300 5.187576 TCAGCCCTCATTTAATTTTCCTTGG 59.812 40.000 0.00 0.00 0.00 3.61
301 302 4.080919 GCCCTCATTTAATTTTCCTTGGCT 60.081 41.667 0.00 0.00 0.00 4.75
303 304 5.423290 CCCTCATTTAATTTTCCTTGGCTCT 59.577 40.000 0.00 0.00 0.00 4.09
304 305 6.335777 CCTCATTTAATTTTCCTTGGCTCTG 58.664 40.000 0.00 0.00 0.00 3.35
321 322 2.434359 GCCGCCGCTAACAAGAGT 60.434 61.111 0.00 0.00 0.00 3.24
328 329 3.323243 GCCGCTAACAAGAGTTTACAGA 58.677 45.455 0.00 0.00 39.15 3.41
333 334 7.360607 GCCGCTAACAAGAGTTTACAGAAAATA 60.361 37.037 0.00 0.00 39.15 1.40
383 387 8.398878 TGTTATTTTGAACGGGTAAAGAATCT 57.601 30.769 0.00 0.00 31.59 2.40
386 390 9.729281 TTATTTTGAACGGGTAAAGAATCTAGT 57.271 29.630 0.00 0.00 0.00 2.57
399 403 0.179073 ATCTAGTGCGCGGCAGATTT 60.179 50.000 8.83 0.00 40.08 2.17
416 420 5.619981 GCAGATTTAGCGAAAACCAGTGAAT 60.620 40.000 0.00 0.00 0.00 2.57
433 437 2.035449 TGAATGAAGAGTCCAACGTCGT 59.965 45.455 0.00 0.00 0.00 4.34
484 488 1.065551 AGCTTGAAACTGAAACACGGC 59.934 47.619 0.00 0.00 0.00 5.68
508 512 2.034066 ACCGGCCAGTCCAACATG 59.966 61.111 0.00 0.00 34.01 3.21
514 518 0.890542 GCCAGTCCAACATGCTGACA 60.891 55.000 11.14 0.00 32.39 3.58
515 519 1.162698 CCAGTCCAACATGCTGACAG 58.837 55.000 11.14 0.00 32.39 3.51
519 523 0.764271 TCCAACATGCTGACAGGACA 59.236 50.000 4.26 0.00 0.00 4.02
520 524 1.142667 TCCAACATGCTGACAGGACAA 59.857 47.619 4.26 0.00 0.00 3.18
521 525 1.955778 CCAACATGCTGACAGGACAAA 59.044 47.619 4.26 0.00 0.00 2.83
522 526 2.559668 CCAACATGCTGACAGGACAAAT 59.440 45.455 4.26 0.00 0.00 2.32
524 528 4.218200 CCAACATGCTGACAGGACAAATTA 59.782 41.667 4.26 0.00 0.00 1.40
525 529 5.105635 CCAACATGCTGACAGGACAAATTAT 60.106 40.000 4.26 0.00 0.00 1.28
528 548 7.886629 ACATGCTGACAGGACAAATTATTAT 57.113 32.000 4.26 0.00 0.00 1.28
537 557 2.823747 GACAAATTATTATCCGGCCCCC 59.176 50.000 0.00 0.00 0.00 5.40
559 580 3.855689 AAAAATGCAGTCCATCCTTCG 57.144 42.857 0.00 0.00 31.43 3.79
560 581 2.496899 AAATGCAGTCCATCCTTCGT 57.503 45.000 0.00 0.00 31.43 3.85
561 582 2.029838 AATGCAGTCCATCCTTCGTC 57.970 50.000 0.00 0.00 31.43 4.20
562 583 0.179000 ATGCAGTCCATCCTTCGTCC 59.821 55.000 0.00 0.00 0.00 4.79
563 584 1.191489 TGCAGTCCATCCTTCGTCCA 61.191 55.000 0.00 0.00 0.00 4.02
564 585 0.460987 GCAGTCCATCCTTCGTCCAG 60.461 60.000 0.00 0.00 0.00 3.86
565 586 0.460987 CAGTCCATCCTTCGTCCAGC 60.461 60.000 0.00 0.00 0.00 4.85
566 587 1.519455 GTCCATCCTTCGTCCAGCG 60.519 63.158 0.00 0.00 43.01 5.18
567 588 2.202932 CCATCCTTCGTCCAGCGG 60.203 66.667 0.00 0.00 41.72 5.52
568 589 2.892425 CATCCTTCGTCCAGCGGC 60.892 66.667 0.00 0.00 41.72 6.53
569 590 3.390521 ATCCTTCGTCCAGCGGCA 61.391 61.111 1.45 0.00 41.72 5.69
570 591 3.376935 ATCCTTCGTCCAGCGGCAG 62.377 63.158 1.45 0.00 41.72 4.85
572 593 4.069232 CTTCGTCCAGCGGCAGGA 62.069 66.667 10.36 10.36 41.72 3.86
573 594 3.376935 CTTCGTCCAGCGGCAGGAT 62.377 63.158 17.52 0.00 41.72 3.24
574 595 3.371097 TTCGTCCAGCGGCAGGATC 62.371 63.158 17.52 10.04 41.72 3.36
576 597 4.148825 GTCCAGCGGCAGGATCGT 62.149 66.667 17.52 0.00 37.52 3.73
577 598 3.390521 TCCAGCGGCAGGATCGTT 61.391 61.111 10.36 0.00 0.00 3.85
586 607 1.425428 CAGGATCGTTTTCTGCCGC 59.575 57.895 0.00 0.00 0.00 6.53
616 637 2.815308 CCCTCCCTCCACGATTCG 59.185 66.667 4.14 4.14 0.00 3.34
617 638 2.107141 CCTCCCTCCACGATTCGC 59.893 66.667 5.86 0.00 0.00 4.70
618 639 2.721167 CCTCCCTCCACGATTCGCA 61.721 63.158 5.86 0.00 0.00 5.10
620 641 2.885644 CCCTCCACGATTCGCACG 60.886 66.667 5.86 0.00 0.00 5.34
621 642 2.885644 CCTCCACGATTCGCACGG 60.886 66.667 5.86 4.75 34.93 4.94
638 665 3.948719 GGCACGGTTGACCCTGGA 61.949 66.667 0.00 0.00 0.00 3.86
641 668 1.676968 CACGGTTGACCCTGGATGA 59.323 57.895 0.00 0.00 0.00 2.92
655 682 1.590259 GATGAAGACCGGAGAGCGC 60.590 63.158 9.46 0.00 0.00 5.92
672 699 3.431725 CGGGCCCGAAGCTGAAAC 61.432 66.667 41.82 0.00 43.05 2.78
673 700 3.431725 GGGCCCGAAGCTGAAACG 61.432 66.667 5.69 0.00 43.05 3.60
675 702 2.677979 GGCCCGAAGCTGAAACGAC 61.678 63.158 0.00 0.00 43.05 4.34
678 705 0.942410 CCCGAAGCTGAAACGACGAA 60.942 55.000 0.00 0.00 0.00 3.85
680 707 0.161024 CGAAGCTGAAACGACGAACC 59.839 55.000 0.00 0.00 0.00 3.62
681 708 0.511653 GAAGCTGAAACGACGAACCC 59.488 55.000 0.00 0.00 0.00 4.11
682 709 1.219522 AAGCTGAAACGACGAACCCG 61.220 55.000 0.00 0.00 42.50 5.28
683 710 2.851104 CTGAAACGACGAACCCGC 59.149 61.111 0.00 0.00 39.95 6.13
691 725 2.515057 ACGAACCCGCAAACAGCA 60.515 55.556 0.00 0.00 46.13 4.41
695 729 0.594796 GAACCCGCAAACAGCAACAG 60.595 55.000 0.00 0.00 46.13 3.16
697 731 2.723746 CCGCAAACAGCAACAGCT 59.276 55.556 0.00 0.00 46.13 4.24
698 732 1.514678 CCCGCAAACAGCAACAGCTA 61.515 55.000 0.00 0.00 46.13 3.32
699 733 0.110056 CCGCAAACAGCAACAGCTAG 60.110 55.000 0.00 0.00 46.13 3.42
702 736 1.609208 CAAACAGCAACAGCTAGGGT 58.391 50.000 0.00 0.00 36.70 4.34
703 737 1.956477 CAAACAGCAACAGCTAGGGTT 59.044 47.619 0.00 0.00 36.70 4.11
704 738 1.609208 AACAGCAACAGCTAGGGTTG 58.391 50.000 10.29 10.29 46.41 3.77
711 745 0.910088 ACAGCTAGGGTTGGGGAGAC 60.910 60.000 0.00 0.00 0.00 3.36
716 750 0.901580 TAGGGTTGGGGAGACGTGTC 60.902 60.000 3.66 3.66 0.00 3.67
717 751 2.513259 GGGTTGGGGAGACGTGTCA 61.513 63.158 15.28 0.00 0.00 3.58
719 753 0.602905 GGTTGGGGAGACGTGTCAAG 60.603 60.000 15.28 0.00 0.00 3.02
721 755 1.052124 TTGGGGAGACGTGTCAAGGT 61.052 55.000 15.28 0.00 0.00 3.50
722 756 1.004918 GGGGAGACGTGTCAAGGTG 60.005 63.158 15.28 0.00 0.00 4.00
723 757 1.469335 GGGGAGACGTGTCAAGGTGA 61.469 60.000 15.28 0.00 0.00 4.02
725 759 1.499049 GGAGACGTGTCAAGGTGAAC 58.501 55.000 15.28 0.00 0.00 3.18
727 761 0.249322 AGACGTGTCAAGGTGAACCG 60.249 55.000 0.00 0.00 42.08 4.44
728 762 0.249155 GACGTGTCAAGGTGAACCGA 60.249 55.000 0.00 0.00 42.08 4.69
729 763 0.176219 ACGTGTCAAGGTGAACCGAA 59.824 50.000 0.00 0.00 42.08 4.30
730 764 0.580104 CGTGTCAAGGTGAACCGAAC 59.420 55.000 0.00 0.00 42.08 3.95
731 765 0.942252 GTGTCAAGGTGAACCGAACC 59.058 55.000 0.00 0.00 42.08 3.62
734 768 2.281276 AAGGTGAACCGAACCCGC 60.281 61.111 0.00 0.00 42.08 6.13
735 769 3.109592 AAGGTGAACCGAACCCGCA 62.110 57.895 0.00 0.00 42.08 5.69
737 771 2.280592 GTGAACCGAACCCGCACT 60.281 61.111 0.00 0.00 0.00 4.40
739 773 2.029964 GAACCGAACCCGCACTGA 59.970 61.111 0.00 0.00 0.00 3.41
740 774 2.027625 GAACCGAACCCGCACTGAG 61.028 63.158 0.00 0.00 0.00 3.35
750 871 3.184683 GCACTGAGCTTCTCGGCG 61.185 66.667 0.00 0.00 40.26 6.46
769 896 3.123804 GCGCCGAATATATATCACCCAG 58.876 50.000 0.00 0.00 0.00 4.45
770 897 3.123804 CGCCGAATATATATCACCCAGC 58.876 50.000 0.00 0.00 0.00 4.85
771 898 3.467803 GCCGAATATATATCACCCAGCC 58.532 50.000 0.00 0.00 0.00 4.85
772 899 3.744530 GCCGAATATATATCACCCAGCCC 60.745 52.174 0.00 0.00 0.00 5.19
773 900 3.181454 CCGAATATATATCACCCAGCCCC 60.181 52.174 0.00 0.00 0.00 5.80
774 901 3.181454 CGAATATATATCACCCAGCCCCC 60.181 52.174 0.00 0.00 0.00 5.40
815 942 2.679996 GGGCCATCAACACCACCC 60.680 66.667 4.39 0.00 0.00 4.61
864 1000 1.142465 CAGGATAGTGCTGCTTCCCAT 59.858 52.381 0.00 0.00 0.00 4.00
874 1010 2.092914 GCTGCTTCCCATTACCAGTAGT 60.093 50.000 0.00 0.00 0.00 2.73
879 1015 1.137697 CCCATTACCAGTAGTCCCCC 58.862 60.000 0.00 0.00 0.00 5.40
880 1016 1.626913 CCCATTACCAGTAGTCCCCCA 60.627 57.143 0.00 0.00 0.00 4.96
881 1017 1.768870 CCATTACCAGTAGTCCCCCAG 59.231 57.143 0.00 0.00 0.00 4.45
886 1043 1.296715 CAGTAGTCCCCCAGCACAC 59.703 63.158 0.00 0.00 0.00 3.82
1174 1400 3.807538 GCATCCTGCGTGGCACAG 61.808 66.667 19.09 11.48 32.89 3.66
1211 1443 2.356553 GGCAACGGCGACTACACA 60.357 61.111 16.62 0.00 42.47 3.72
1242 1483 1.416813 CGAAGCTGCGACTGATCACC 61.417 60.000 9.01 0.00 0.00 4.02
1246 1487 2.994995 TGCGACTGATCACCGGGT 60.995 61.111 6.32 0.00 0.00 5.28
1247 1488 2.202756 GCGACTGATCACCGGGTC 60.203 66.667 6.32 0.62 0.00 4.46
1248 1489 2.494918 CGACTGATCACCGGGTCC 59.505 66.667 6.32 0.00 0.00 4.46
1249 1490 2.494918 GACTGATCACCGGGTCCG 59.505 66.667 6.32 1.86 39.44 4.79
1293 1540 1.354101 CCACTACCCAACCACTACCA 58.646 55.000 0.00 0.00 0.00 3.25
1295 1542 1.975680 CACTACCCAACCACTACCACT 59.024 52.381 0.00 0.00 0.00 4.00
1296 1543 1.975680 ACTACCCAACCACTACCACTG 59.024 52.381 0.00 0.00 0.00 3.66
1303 1550 1.153745 CCACTACCACTGCTCTCGC 60.154 63.158 0.00 0.00 0.00 5.03
1304 1551 1.515088 CACTACCACTGCTCTCGCG 60.515 63.158 0.00 0.00 39.65 5.87
1311 1580 2.023461 CTGCTCTCGCGAGGTACG 59.977 66.667 33.98 20.54 45.66 3.67
1367 1639 1.117150 GGCCATGGCAGTTCATCAAT 58.883 50.000 36.56 0.00 44.11 2.57
1383 1675 6.001449 TCATCAATTCCCCCTAAACACTAG 57.999 41.667 0.00 0.00 0.00 2.57
1407 1699 0.534412 GCCTCTGCTTCTGCTCTGTA 59.466 55.000 0.00 0.00 40.48 2.74
1409 1701 1.468908 CCTCTGCTTCTGCTCTGTACG 60.469 57.143 0.00 0.00 40.48 3.67
1432 1726 3.561725 GCAGCTCTGTTTTGTTCTGTAGT 59.438 43.478 0.00 0.00 0.00 2.73
1440 1735 6.757010 TCTGTTTTGTTCTGTAGTTCTGTCTC 59.243 38.462 0.00 0.00 0.00 3.36
1477 1772 3.132111 TCTTTCTCTGTTTGGGTTTTGGC 59.868 43.478 0.00 0.00 0.00 4.52
1507 1802 4.758674 TCTTCCAATCTGCTGAAACTGAAG 59.241 41.667 14.06 14.06 0.00 3.02
1508 1803 4.090761 TCCAATCTGCTGAAACTGAAGT 57.909 40.909 0.00 0.00 0.00 3.01
1554 1864 2.942804 TGAGGCTGTGGATTTTGACAA 58.057 42.857 0.00 0.00 0.00 3.18
1649 1983 9.362539 GTAGTGTAGTTGCTTGTAATTTAGCTA 57.637 33.333 0.00 0.00 38.22 3.32
1668 2002 1.081641 CAGCTGCTTTCGCCTTGTG 60.082 57.895 0.00 0.00 34.43 3.33
1675 2009 2.677836 TGCTTTCGCCTTGTGTCATATC 59.322 45.455 0.00 0.00 34.43 1.63
1708 2049 3.309682 TCAAGTGAAAGAAAGCACTGTCG 59.690 43.478 0.00 0.00 44.06 4.35
1716 2058 4.199432 AGAAAGCACTGTCGAATCTCAT 57.801 40.909 0.00 0.00 0.00 2.90
1738 2080 8.539117 TCATATGAGTCTCCATCTCTGTTTTA 57.461 34.615 0.00 0.00 33.59 1.52
1744 2086 7.400339 TGAGTCTCCATCTCTGTTTTACCTATT 59.600 37.037 0.00 0.00 33.59 1.73
1745 2087 7.560368 AGTCTCCATCTCTGTTTTACCTATTG 58.440 38.462 0.00 0.00 0.00 1.90
1746 2088 6.258947 GTCTCCATCTCTGTTTTACCTATTGC 59.741 42.308 0.00 0.00 0.00 3.56
1747 2089 6.061022 TCCATCTCTGTTTTACCTATTGCA 57.939 37.500 0.00 0.00 0.00 4.08
1756 2099 5.770663 TGTTTTACCTATTGCAAGTGGCTTA 59.229 36.000 17.29 4.27 45.15 3.09
1760 2103 5.630415 ACCTATTGCAAGTGGCTTATCTA 57.370 39.130 17.29 0.00 45.15 1.98
1766 2109 4.905429 TGCAAGTGGCTTATCTAACTTCA 58.095 39.130 0.00 0.00 45.15 3.02
1769 2112 5.163814 GCAAGTGGCTTATCTAACTTCACTG 60.164 44.000 0.00 0.00 40.25 3.66
1776 2119 7.044798 GGCTTATCTAACTTCACTGATTCACT 58.955 38.462 0.00 0.00 0.00 3.41
1782 2125 7.148641 TCTAACTTCACTGATTCACTCACTTC 58.851 38.462 0.00 0.00 0.00 3.01
1788 2131 5.770162 TCACTGATTCACTCACTTCTCACTA 59.230 40.000 0.00 0.00 0.00 2.74
1797 2140 2.368548 TCACTTCTCACTAGCCAAGCAA 59.631 45.455 0.00 0.00 0.00 3.91
1798 2141 3.008375 TCACTTCTCACTAGCCAAGCAAT 59.992 43.478 0.00 0.00 0.00 3.56
1801 2144 3.988976 TCTCACTAGCCAAGCAATTCT 57.011 42.857 0.00 0.00 0.00 2.40
1802 2145 4.292186 TCTCACTAGCCAAGCAATTCTT 57.708 40.909 0.00 0.00 34.78 2.52
1812 2155 2.195741 AGCAATTCTTGAGAGCAGCA 57.804 45.000 0.00 0.00 0.00 4.41
1813 2156 2.085320 AGCAATTCTTGAGAGCAGCAG 58.915 47.619 0.00 0.00 0.00 4.24
1814 2157 1.467713 GCAATTCTTGAGAGCAGCAGC 60.468 52.381 0.00 0.00 42.56 5.25
1815 2158 1.810755 CAATTCTTGAGAGCAGCAGCA 59.189 47.619 3.17 0.00 45.49 4.41
1816 2159 2.195741 ATTCTTGAGAGCAGCAGCAA 57.804 45.000 3.17 0.00 45.49 3.91
1817 2160 1.971481 TTCTTGAGAGCAGCAGCAAA 58.029 45.000 3.17 0.00 45.49 3.68
1818 2161 1.520494 TCTTGAGAGCAGCAGCAAAG 58.480 50.000 3.17 1.96 45.49 2.77
1819 2162 1.071228 TCTTGAGAGCAGCAGCAAAGA 59.929 47.619 3.17 4.34 45.49 2.52
1820 2163 2.085320 CTTGAGAGCAGCAGCAAAGAT 58.915 47.619 3.17 0.00 45.49 2.40
1821 2164 3.055602 TCTTGAGAGCAGCAGCAAAGATA 60.056 43.478 3.17 0.00 45.49 1.98
1822 2165 3.555527 TGAGAGCAGCAGCAAAGATAT 57.444 42.857 3.17 0.00 45.49 1.63
1823 2166 3.882444 TGAGAGCAGCAGCAAAGATATT 58.118 40.909 3.17 0.00 45.49 1.28
1824 2167 4.267536 TGAGAGCAGCAGCAAAGATATTT 58.732 39.130 3.17 0.00 45.49 1.40
1825 2168 5.430886 TGAGAGCAGCAGCAAAGATATTTA 58.569 37.500 3.17 0.00 45.49 1.40
1826 2169 6.060136 TGAGAGCAGCAGCAAAGATATTTAT 58.940 36.000 3.17 0.00 45.49 1.40
1827 2170 6.544931 TGAGAGCAGCAGCAAAGATATTTATT 59.455 34.615 3.17 0.00 45.49 1.40
1828 2171 6.736123 AGAGCAGCAGCAAAGATATTTATTG 58.264 36.000 3.17 0.00 45.49 1.90
1836 2179 6.520792 GCAAAGATATTTATTGCTTGCTGG 57.479 37.500 11.57 0.00 44.54 4.85
1837 2180 6.044682 GCAAAGATATTTATTGCTTGCTGGT 58.955 36.000 11.57 0.00 44.54 4.00
1838 2181 7.202526 GCAAAGATATTTATTGCTTGCTGGTA 58.797 34.615 11.57 0.00 44.54 3.25
1839 2182 7.380602 GCAAAGATATTTATTGCTTGCTGGTAG 59.619 37.037 11.57 0.00 44.54 3.18
1844 2187 8.696043 ATATTTATTGCTTGCTGGTAGATCAA 57.304 30.769 0.00 0.00 0.00 2.57
1859 2202 2.826128 AGATCAACTACTGCTCGGAACA 59.174 45.455 0.00 0.00 0.00 3.18
1860 2203 2.724977 TCAACTACTGCTCGGAACAG 57.275 50.000 6.85 6.85 41.08 3.16
1861 2204 2.235891 TCAACTACTGCTCGGAACAGA 58.764 47.619 14.90 0.00 38.55 3.41
1862 2205 2.229062 TCAACTACTGCTCGGAACAGAG 59.771 50.000 14.90 9.91 38.55 3.35
1868 2211 2.202676 CTCGGAACAGAGCTCGGC 60.203 66.667 14.20 1.85 0.00 5.54
1869 2212 2.989253 TCGGAACAGAGCTCGGCA 60.989 61.111 14.20 0.00 0.00 5.69
1872 2215 1.078848 GGAACAGAGCTCGGCACAT 60.079 57.895 14.20 0.00 0.00 3.21
1873 2216 0.674895 GGAACAGAGCTCGGCACATT 60.675 55.000 14.20 0.22 0.00 2.71
1875 2218 2.555199 GAACAGAGCTCGGCACATTAT 58.445 47.619 14.20 0.00 0.00 1.28
1876 2219 2.698855 ACAGAGCTCGGCACATTATT 57.301 45.000 14.20 0.00 0.00 1.40
1877 2220 2.283298 ACAGAGCTCGGCACATTATTG 58.717 47.619 14.20 2.28 0.00 1.90
1878 2221 1.003116 CAGAGCTCGGCACATTATTGC 60.003 52.381 8.37 0.00 42.18 3.56
1879 2222 1.016627 GAGCTCGGCACATTATTGCA 58.983 50.000 0.00 0.00 44.94 4.08
1881 2224 0.734889 GCTCGGCACATTATTGCACT 59.265 50.000 0.00 0.00 44.94 4.40
1882 2225 1.532505 GCTCGGCACATTATTGCACTG 60.533 52.381 0.00 0.00 44.94 3.66
1884 2227 2.615447 CTCGGCACATTATTGCACTGAT 59.385 45.455 0.00 0.00 44.94 2.90
1886 2229 3.065233 TCGGCACATTATTGCACTGATTC 59.935 43.478 0.00 0.00 44.94 2.52
1887 2230 3.181498 CGGCACATTATTGCACTGATTCA 60.181 43.478 0.00 0.00 44.94 2.57
1889 2232 4.096833 GGCACATTATTGCACTGATTCAGA 59.903 41.667 20.33 0.00 44.94 3.27
1890 2233 5.393352 GGCACATTATTGCACTGATTCAGAA 60.393 40.000 20.33 4.80 44.94 3.02
1891 2234 6.270815 GCACATTATTGCACTGATTCAGAAT 58.729 36.000 20.33 11.54 42.49 2.40
1893 2236 8.080417 GCACATTATTGCACTGATTCAGAATAT 58.920 33.333 20.33 9.73 42.49 1.28
1894 2237 9.961265 CACATTATTGCACTGATTCAGAATATT 57.039 29.630 20.33 7.62 35.18 1.28
1911 2254 9.793259 TCAGAATATTTTCTAAACAGACCAACT 57.207 29.630 0.00 0.00 40.28 3.16
1912 2255 9.831737 CAGAATATTTTCTAAACAGACCAACTG 57.168 33.333 0.00 0.00 44.62 3.16
1925 2268 6.824305 CAGACCAACTGTTAAATCTGGATT 57.176 37.500 15.07 0.00 41.30 3.01
1926 2269 6.846350 CAGACCAACTGTTAAATCTGGATTC 58.154 40.000 15.07 0.50 41.30 2.52
1927 2270 5.946377 AGACCAACTGTTAAATCTGGATTCC 59.054 40.000 0.00 0.00 0.00 3.01
1928 2271 4.700213 ACCAACTGTTAAATCTGGATTCCG 59.300 41.667 1.19 0.00 0.00 4.30
1929 2272 4.700213 CCAACTGTTAAATCTGGATTCCGT 59.300 41.667 0.00 0.00 0.00 4.69
1974 2449 7.878036 GCCATAGGCCGACTTTATAAATAAAA 58.122 34.615 0.00 0.00 44.06 1.52
1975 2450 8.520351 GCCATAGGCCGACTTTATAAATAAAAT 58.480 33.333 0.00 0.00 44.06 1.82
1981 2456 7.860872 GGCCGACTTTATAAATAAAATCACCAG 59.139 37.037 0.00 0.00 30.33 4.00
1983 2458 7.860872 CCGACTTTATAAATAAAATCACCAGGC 59.139 37.037 0.00 0.00 30.33 4.85
1984 2459 8.402472 CGACTTTATAAATAAAATCACCAGGCA 58.598 33.333 0.00 0.00 30.33 4.75
1985 2460 9.736023 GACTTTATAAATAAAATCACCAGGCAG 57.264 33.333 0.00 0.00 31.06 4.85
1986 2461 9.474313 ACTTTATAAATAAAATCACCAGGCAGA 57.526 29.630 0.00 0.00 32.39 4.26
1988 2463 9.474313 TTTATAAATAAAATCACCAGGCAGAGT 57.526 29.630 0.00 0.00 29.93 3.24
1991 2466 7.775053 AAATAAAATCACCAGGCAGAGTTAA 57.225 32.000 0.00 0.00 0.00 2.01
1993 2468 3.788227 AATCACCAGGCAGAGTTAACA 57.212 42.857 8.61 0.00 0.00 2.41
1994 2469 4.307032 AATCACCAGGCAGAGTTAACAT 57.693 40.909 8.61 0.00 0.00 2.71
1995 2470 5.435686 AATCACCAGGCAGAGTTAACATA 57.564 39.130 8.61 0.00 0.00 2.29
1996 2471 4.471904 TCACCAGGCAGAGTTAACATAG 57.528 45.455 8.61 0.00 0.00 2.23
1997 2472 4.093743 TCACCAGGCAGAGTTAACATAGA 58.906 43.478 8.61 0.00 0.00 1.98
2000 2475 3.432326 CCAGGCAGAGTTAACATAGACCC 60.432 52.174 8.61 0.57 0.00 4.46
2001 2476 3.197766 CAGGCAGAGTTAACATAGACCCA 59.802 47.826 8.61 0.00 0.00 4.51
2002 2477 4.040755 AGGCAGAGTTAACATAGACCCAT 58.959 43.478 8.61 0.00 0.00 4.00
2003 2478 5.070446 CAGGCAGAGTTAACATAGACCCATA 59.930 44.000 8.61 0.00 0.00 2.74
2004 2479 5.846714 AGGCAGAGTTAACATAGACCCATAT 59.153 40.000 8.61 0.00 0.00 1.78
2005 2480 5.934625 GGCAGAGTTAACATAGACCCATATG 59.065 44.000 8.61 0.00 38.79 1.78
2006 2481 6.239600 GGCAGAGTTAACATAGACCCATATGA 60.240 42.308 8.61 0.00 36.76 2.15
2007 2482 6.647067 GCAGAGTTAACATAGACCCATATGAC 59.353 42.308 8.61 0.00 36.76 3.06
2008 2483 7.155328 CAGAGTTAACATAGACCCATATGACC 58.845 42.308 8.61 0.00 36.76 4.02
2010 5569 7.015682 AGAGTTAACATAGACCCATATGACCAG 59.984 40.741 8.61 0.00 36.76 4.00
2017 5576 0.752658 CCCATATGACCAGCACGAGA 59.247 55.000 3.65 0.00 0.00 4.04
2018 5577 1.138859 CCCATATGACCAGCACGAGAA 59.861 52.381 3.65 0.00 0.00 2.87
2020 5579 2.418609 CCATATGACCAGCACGAGAACA 60.419 50.000 3.65 0.00 0.00 3.18
2021 5580 3.461061 CATATGACCAGCACGAGAACAT 58.539 45.455 0.00 0.00 0.00 2.71
2025 5584 0.952497 ACCAGCACGAGAACATGCAG 60.952 55.000 0.00 0.00 44.59 4.41
2027 5586 0.720027 CAGCACGAGAACATGCAGAG 59.280 55.000 0.00 0.00 44.59 3.35
2028 5587 0.319728 AGCACGAGAACATGCAGAGT 59.680 50.000 0.00 0.00 44.59 3.24
2029 5588 1.546029 AGCACGAGAACATGCAGAGTA 59.454 47.619 0.00 0.00 44.59 2.59
2030 5589 2.167281 AGCACGAGAACATGCAGAGTAT 59.833 45.455 0.00 0.00 44.59 2.12
2032 5591 3.774066 CACGAGAACATGCAGAGTATCA 58.226 45.455 0.00 0.00 37.82 2.15
2036 5595 3.873952 GAGAACATGCAGAGTATCAACCC 59.126 47.826 0.00 0.00 37.82 4.11
2037 5596 3.264193 AGAACATGCAGAGTATCAACCCA 59.736 43.478 0.00 0.00 37.82 4.51
2042 5601 2.637382 TGCAGAGTATCAACCCAGACAA 59.363 45.455 0.00 0.00 37.82 3.18
2047 5606 2.631062 AGTATCAACCCAGACAACACGA 59.369 45.455 0.00 0.00 0.00 4.35
2048 5607 2.169832 ATCAACCCAGACAACACGAG 57.830 50.000 0.00 0.00 0.00 4.18
2049 5608 1.116308 TCAACCCAGACAACACGAGA 58.884 50.000 0.00 0.00 0.00 4.04
2050 5609 1.068588 TCAACCCAGACAACACGAGAG 59.931 52.381 0.00 0.00 0.00 3.20
2053 5612 1.971357 ACCCAGACAACACGAGAGAAT 59.029 47.619 0.00 0.00 0.00 2.40
2054 5613 3.162666 ACCCAGACAACACGAGAGAATA 58.837 45.455 0.00 0.00 0.00 1.75
2055 5614 3.193691 ACCCAGACAACACGAGAGAATAG 59.806 47.826 0.00 0.00 0.00 1.73
2056 5615 3.193691 CCCAGACAACACGAGAGAATAGT 59.806 47.826 0.00 0.00 0.00 2.12
2057 5616 4.416620 CCAGACAACACGAGAGAATAGTC 58.583 47.826 0.00 0.00 0.00 2.59
2058 5617 4.156922 CCAGACAACACGAGAGAATAGTCT 59.843 45.833 0.00 0.00 36.55 3.24
2059 5618 5.354513 CCAGACAACACGAGAGAATAGTCTA 59.645 44.000 0.00 0.00 32.80 2.59
2061 5620 6.964370 CAGACAACACGAGAGAATAGTCTAAG 59.036 42.308 0.00 0.00 32.80 2.18
2062 5621 6.655848 AGACAACACGAGAGAATAGTCTAAGT 59.344 38.462 0.00 0.00 32.80 2.24
2063 5622 7.823310 AGACAACACGAGAGAATAGTCTAAGTA 59.177 37.037 0.00 0.00 32.80 2.24
2065 5624 7.389884 ACAACACGAGAGAATAGTCTAAGTACA 59.610 37.037 0.00 0.00 32.80 2.90
2066 5625 8.399425 CAACACGAGAGAATAGTCTAAGTACAT 58.601 37.037 0.00 0.00 32.80 2.29
2067 5626 7.921787 ACACGAGAGAATAGTCTAAGTACATG 58.078 38.462 0.00 0.00 32.80 3.21
2070 5629 6.205853 CGAGAGAATAGTCTAAGTACATGGCT 59.794 42.308 0.00 0.00 32.80 4.75
2071 5630 7.255312 CGAGAGAATAGTCTAAGTACATGGCTT 60.255 40.741 0.00 3.83 32.80 4.35
2072 5631 7.947282 AGAGAATAGTCTAAGTACATGGCTTC 58.053 38.462 7.86 0.00 32.80 3.86
2075 5634 6.808321 ATAGTCTAAGTACATGGCTTCCAA 57.192 37.500 7.86 0.00 36.95 3.53
2076 5635 5.091261 AGTCTAAGTACATGGCTTCCAAG 57.909 43.478 7.86 2.38 36.95 3.61
2086 5645 2.162716 GCTTCCAAGCCAGTACACG 58.837 57.895 0.00 0.00 46.20 4.49
2087 5646 1.298859 GCTTCCAAGCCAGTACACGG 61.299 60.000 0.00 0.00 46.20 4.94
2094 5653 1.738099 GCCAGTACACGGCTCACAG 60.738 63.158 16.82 0.00 46.56 3.66
2096 5655 1.738099 CAGTACACGGCTCACAGGC 60.738 63.158 0.00 0.00 37.44 4.85
2121 5680 6.049149 CGGAGGTAGAAAGATAATGAAAGCA 58.951 40.000 0.00 0.00 0.00 3.91
2124 5683 7.326968 AGGTAGAAAGATAATGAAAGCAAGC 57.673 36.000 0.00 0.00 0.00 4.01
2128 5687 5.713861 AGAAAGATAATGAAAGCAAGCCACT 59.286 36.000 0.00 0.00 0.00 4.00
2129 5688 6.886459 AGAAAGATAATGAAAGCAAGCCACTA 59.114 34.615 0.00 0.00 0.00 2.74
2130 5689 6.690194 AAGATAATGAAAGCAAGCCACTAG 57.310 37.500 0.00 0.00 0.00 2.57
2131 5690 4.578105 AGATAATGAAAGCAAGCCACTAGC 59.422 41.667 0.00 0.00 44.25 3.42
2140 5699 4.110493 GCCACTAGCGCCTAAGTG 57.890 61.111 21.84 21.84 0.00 3.16
2147 5706 2.747855 GCGCCTAAGTGCCTGCTT 60.748 61.111 0.00 0.00 44.01 3.91
2149 5708 1.375908 CGCCTAAGTGCCTGCTTGA 60.376 57.895 0.00 0.00 0.00 3.02
2150 5709 0.955428 CGCCTAAGTGCCTGCTTGAA 60.955 55.000 0.00 0.00 0.00 2.69
2152 5711 1.884067 GCCTAAGTGCCTGCTTGAACT 60.884 52.381 0.00 0.00 0.00 3.01
2154 5713 1.808945 CTAAGTGCCTGCTTGAACTGG 59.191 52.381 0.00 0.00 0.00 4.00
2156 5715 2.115910 TGCCTGCTTGAACTGGGG 59.884 61.111 0.00 0.00 0.00 4.96
2157 5716 2.436109 GCCTGCTTGAACTGGGGA 59.564 61.111 0.00 0.00 0.00 4.81
2160 5719 0.622665 CCTGCTTGAACTGGGGAGAT 59.377 55.000 0.00 0.00 0.00 2.75
2161 5720 1.681166 CCTGCTTGAACTGGGGAGATG 60.681 57.143 0.00 0.00 0.00 2.90
2162 5721 0.329261 TGCTTGAACTGGGGAGATGG 59.671 55.000 0.00 0.00 0.00 3.51
2163 5722 0.620556 GCTTGAACTGGGGAGATGGA 59.379 55.000 0.00 0.00 0.00 3.41
2165 5724 2.191400 CTTGAACTGGGGAGATGGAGA 58.809 52.381 0.00 0.00 0.00 3.71
2166 5725 2.575921 TGAACTGGGGAGATGGAGAT 57.424 50.000 0.00 0.00 0.00 2.75
2168 5727 3.581101 TGAACTGGGGAGATGGAGATAG 58.419 50.000 0.00 0.00 0.00 2.08
2170 5729 1.221523 ACTGGGGAGATGGAGATAGCA 59.778 52.381 0.00 0.00 0.00 3.49
2172 5731 1.505098 TGGGGAGATGGAGATAGCAGA 59.495 52.381 0.00 0.00 0.00 4.26
2173 5732 2.090550 TGGGGAGATGGAGATAGCAGAA 60.091 50.000 0.00 0.00 0.00 3.02
2174 5733 3.180507 GGGGAGATGGAGATAGCAGAAT 58.819 50.000 0.00 0.00 0.00 2.40
2175 5734 3.586618 GGGGAGATGGAGATAGCAGAATT 59.413 47.826 0.00 0.00 0.00 2.17
2176 5735 4.323409 GGGGAGATGGAGATAGCAGAATTC 60.323 50.000 0.00 0.00 0.00 2.17
2177 5736 4.323409 GGGAGATGGAGATAGCAGAATTCC 60.323 50.000 0.65 0.00 0.00 3.01
2178 5737 4.285517 GGAGATGGAGATAGCAGAATTCCA 59.714 45.833 0.65 0.00 41.75 3.53
2179 5738 5.481105 GAGATGGAGATAGCAGAATTCCAG 58.519 45.833 0.65 0.00 40.93 3.86
2180 5739 5.153675 AGATGGAGATAGCAGAATTCCAGA 58.846 41.667 0.65 0.00 40.93 3.86
2181 5740 5.786457 AGATGGAGATAGCAGAATTCCAGAT 59.214 40.000 0.65 0.00 40.93 2.90
2183 5742 5.153675 TGGAGATAGCAGAATTCCAGATCT 58.846 41.667 0.65 5.73 33.21 2.75
2184 5743 5.605908 TGGAGATAGCAGAATTCCAGATCTT 59.394 40.000 0.65 0.00 33.21 2.40
2185 5744 5.933463 GGAGATAGCAGAATTCCAGATCTTG 59.067 44.000 0.65 0.00 0.00 3.02
2195 5754 1.108776 CCAGATCTTGGCCAACATGG 58.891 55.000 16.05 15.65 40.87 3.66
2204 5763 2.264480 CCAACATGGCGTCGAGGA 59.736 61.111 9.75 0.00 0.00 3.71
2205 5764 2.100631 CCAACATGGCGTCGAGGAC 61.101 63.158 9.75 6.67 0.00 3.85
2221 5780 2.037527 ACGTCCCTGTCCTCCTCC 59.962 66.667 0.00 0.00 0.00 4.30
2222 5781 2.360980 CGTCCCTGTCCTCCTCCT 59.639 66.667 0.00 0.00 0.00 3.69
2223 5782 1.305381 CGTCCCTGTCCTCCTCCTT 60.305 63.158 0.00 0.00 0.00 3.36
2224 5783 0.033405 CGTCCCTGTCCTCCTCCTTA 60.033 60.000 0.00 0.00 0.00 2.69
2225 5784 1.783071 GTCCCTGTCCTCCTCCTTAG 58.217 60.000 0.00 0.00 0.00 2.18
2227 5786 1.288335 TCCCTGTCCTCCTCCTTAGTC 59.712 57.143 0.00 0.00 0.00 2.59
2228 5787 1.007238 CCCTGTCCTCCTCCTTAGTCA 59.993 57.143 0.00 0.00 0.00 3.41
2229 5788 2.559931 CCCTGTCCTCCTCCTTAGTCAA 60.560 54.545 0.00 0.00 0.00 3.18
2230 5789 3.379452 CCTGTCCTCCTCCTTAGTCAAT 58.621 50.000 0.00 0.00 0.00 2.57
2231 5790 4.547671 CCTGTCCTCCTCCTTAGTCAATA 58.452 47.826 0.00 0.00 0.00 1.90
2232 5791 4.962995 CCTGTCCTCCTCCTTAGTCAATAA 59.037 45.833 0.00 0.00 0.00 1.40
2233 5792 5.604650 CCTGTCCTCCTCCTTAGTCAATAAT 59.395 44.000 0.00 0.00 0.00 1.28
2234 5793 6.239458 CCTGTCCTCCTCCTTAGTCAATAATC 60.239 46.154 0.00 0.00 0.00 1.75
2236 5795 6.551601 TGTCCTCCTCCTTAGTCAATAATCTC 59.448 42.308 0.00 0.00 0.00 2.75
2237 5796 6.014925 GTCCTCCTCCTTAGTCAATAATCTCC 60.015 46.154 0.00 0.00 0.00 3.71
2238 5797 5.841237 CCTCCTCCTTAGTCAATAATCTCCA 59.159 44.000 0.00 0.00 0.00 3.86
2240 5799 6.444704 TCCTCCTTAGTCAATAATCTCCACT 58.555 40.000 0.00 0.00 0.00 4.00
2241 5800 6.325028 TCCTCCTTAGTCAATAATCTCCACTG 59.675 42.308 0.00 0.00 0.00 3.66
2243 5802 5.663106 TCCTTAGTCAATAATCTCCACTGCT 59.337 40.000 0.00 0.00 0.00 4.24
2244 5803 5.757320 CCTTAGTCAATAATCTCCACTGCTG 59.243 44.000 0.00 0.00 0.00 4.41
2245 5804 3.539604 AGTCAATAATCTCCACTGCTGC 58.460 45.455 0.00 0.00 0.00 5.25
2246 5805 3.054875 AGTCAATAATCTCCACTGCTGCA 60.055 43.478 0.88 0.88 0.00 4.41
2247 5806 3.311871 GTCAATAATCTCCACTGCTGCAG 59.688 47.826 27.02 27.02 37.52 4.41
2248 5807 2.617308 CAATAATCTCCACTGCTGCAGG 59.383 50.000 31.00 19.91 35.51 4.85
2249 5808 1.571955 TAATCTCCACTGCTGCAGGA 58.428 50.000 31.00 20.34 35.51 3.86
2250 5809 0.694771 AATCTCCACTGCTGCAGGAA 59.305 50.000 31.00 15.87 35.51 3.36
2251 5810 0.917533 ATCTCCACTGCTGCAGGAAT 59.082 50.000 31.00 14.67 35.51 3.01
2252 5811 1.571955 TCTCCACTGCTGCAGGAATA 58.428 50.000 31.00 13.89 35.51 1.75
2253 5812 2.121948 TCTCCACTGCTGCAGGAATAT 58.878 47.619 31.00 9.20 35.51 1.28
2254 5813 3.308401 TCTCCACTGCTGCAGGAATATA 58.692 45.455 31.00 11.02 35.51 0.86
2255 5814 3.070159 TCTCCACTGCTGCAGGAATATAC 59.930 47.826 31.00 0.00 35.51 1.47
2256 5815 2.771372 TCCACTGCTGCAGGAATATACA 59.229 45.455 31.00 1.55 35.51 2.29
2257 5816 3.199727 TCCACTGCTGCAGGAATATACAA 59.800 43.478 31.00 5.56 35.51 2.41
2258 5817 3.562973 CCACTGCTGCAGGAATATACAAG 59.437 47.826 31.00 5.14 35.51 3.16
2259 5818 4.194640 CACTGCTGCAGGAATATACAAGT 58.805 43.478 31.00 5.80 35.51 3.16
2260 5819 4.272018 CACTGCTGCAGGAATATACAAGTC 59.728 45.833 31.00 0.00 35.51 3.01
2261 5820 4.163078 ACTGCTGCAGGAATATACAAGTCT 59.837 41.667 31.00 4.29 35.51 3.24
2262 5821 5.102953 TGCTGCAGGAATATACAAGTCTT 57.897 39.130 17.12 0.00 0.00 3.01
2263 5822 6.127054 ACTGCTGCAGGAATATACAAGTCTTA 60.127 38.462 31.00 0.00 35.51 2.10
2264 5823 6.649155 TGCTGCAGGAATATACAAGTCTTAA 58.351 36.000 17.12 0.00 0.00 1.85
2265 5824 7.109501 TGCTGCAGGAATATACAAGTCTTAAA 58.890 34.615 17.12 0.00 0.00 1.52
2266 5825 7.775093 TGCTGCAGGAATATACAAGTCTTAAAT 59.225 33.333 17.12 0.00 0.00 1.40
2267 5826 9.273016 GCTGCAGGAATATACAAGTCTTAAATA 57.727 33.333 17.12 0.00 0.00 1.40
2269 5828 9.273016 TGCAGGAATATACAAGTCTTAAATAGC 57.727 33.333 0.00 0.00 0.00 2.97
2270 5829 9.273016 GCAGGAATATACAAGTCTTAAATAGCA 57.727 33.333 0.00 0.00 0.00 3.49
2286 5845 2.485677 GCAATCAGCAGGCTTAGCA 58.514 52.632 6.53 0.00 44.79 3.49
2287 5846 0.381089 GCAATCAGCAGGCTTAGCAG 59.619 55.000 6.53 0.00 44.79 4.24
2288 5847 1.022735 CAATCAGCAGGCTTAGCAGG 58.977 55.000 6.53 0.00 0.00 4.85
2289 5848 0.106819 AATCAGCAGGCTTAGCAGGG 60.107 55.000 6.53 0.00 0.00 4.45
2290 5849 0.984961 ATCAGCAGGCTTAGCAGGGA 60.985 55.000 6.53 0.00 0.00 4.20
2291 5850 1.200760 TCAGCAGGCTTAGCAGGGAA 61.201 55.000 6.53 0.00 0.00 3.97
2292 5851 0.322816 CAGCAGGCTTAGCAGGGAAA 60.323 55.000 6.53 0.00 0.00 3.13
2293 5852 0.405585 AGCAGGCTTAGCAGGGAAAA 59.594 50.000 6.53 0.00 0.00 2.29
2294 5853 0.528017 GCAGGCTTAGCAGGGAAAAC 59.472 55.000 6.53 0.00 0.00 2.43
2295 5854 1.909700 CAGGCTTAGCAGGGAAAACA 58.090 50.000 6.53 0.00 0.00 2.83
2296 5855 2.450476 CAGGCTTAGCAGGGAAAACAT 58.550 47.619 6.53 0.00 0.00 2.71
2297 5856 2.165030 CAGGCTTAGCAGGGAAAACATG 59.835 50.000 6.53 0.00 0.00 3.21
2306 5865 3.535561 CAGGGAAAACATGCTCGATAGT 58.464 45.455 0.00 0.00 37.40 2.12
2307 5866 4.693283 CAGGGAAAACATGCTCGATAGTA 58.307 43.478 0.00 0.00 37.40 1.82
2308 5867 5.116180 CAGGGAAAACATGCTCGATAGTAA 58.884 41.667 0.00 0.00 37.40 2.24
2309 5868 5.584649 CAGGGAAAACATGCTCGATAGTAAA 59.415 40.000 0.00 0.00 37.40 2.01
2310 5869 6.260936 CAGGGAAAACATGCTCGATAGTAAAT 59.739 38.462 0.00 0.00 37.40 1.40
2311 5870 6.828785 AGGGAAAACATGCTCGATAGTAAATT 59.171 34.615 0.00 0.00 37.40 1.82
2312 5871 7.339466 AGGGAAAACATGCTCGATAGTAAATTT 59.661 33.333 0.00 0.00 37.40 1.82
2313 5872 8.617809 GGGAAAACATGCTCGATAGTAAATTTA 58.382 33.333 0.00 0.00 37.40 1.40
2318 5877 9.561069 AACATGCTCGATAGTAAATTTATTCCT 57.439 29.630 0.31 0.00 37.40 3.36
2319 5878 9.561069 ACATGCTCGATAGTAAATTTATTCCTT 57.439 29.630 0.31 0.00 37.40 3.36
2320 5879 9.817365 CATGCTCGATAGTAAATTTATTCCTTG 57.183 33.333 0.31 0.00 37.40 3.61
2321 5880 8.958119 TGCTCGATAGTAAATTTATTCCTTGT 57.042 30.769 0.31 0.00 37.40 3.16
2322 5881 9.042008 TGCTCGATAGTAAATTTATTCCTTGTC 57.958 33.333 0.31 0.00 37.40 3.18
2323 5882 8.215132 GCTCGATAGTAAATTTATTCCTTGTCG 58.785 37.037 0.31 7.88 37.40 4.35
2324 5883 9.245962 CTCGATAGTAAATTTATTCCTTGTCGT 57.754 33.333 0.31 0.00 37.40 4.34
2325 5884 9.241317 TCGATAGTAAATTTATTCCTTGTCGTC 57.759 33.333 0.31 0.00 37.40 4.20
2326 5885 8.485591 CGATAGTAAATTTATTCCTTGTCGTCC 58.514 37.037 0.31 0.00 0.00 4.79
2327 5886 9.321562 GATAGTAAATTTATTCCTTGTCGTCCA 57.678 33.333 0.31 0.00 0.00 4.02
2328 5887 7.989416 AGTAAATTTATTCCTTGTCGTCCAA 57.011 32.000 0.31 0.00 0.00 3.53
2329 5888 8.398878 AGTAAATTTATTCCTTGTCGTCCAAA 57.601 30.769 0.31 0.00 31.20 3.28
2330 5889 8.512138 AGTAAATTTATTCCTTGTCGTCCAAAG 58.488 33.333 0.31 0.00 31.20 2.77
2331 5890 5.897377 ATTTATTCCTTGTCGTCCAAAGG 57.103 39.130 0.00 0.00 31.20 3.11
2332 5891 2.200373 ATTCCTTGTCGTCCAAAGGG 57.800 50.000 1.82 0.00 31.20 3.95
2333 5892 1.133363 TTCCTTGTCGTCCAAAGGGA 58.867 50.000 1.82 0.00 42.29 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.619981 GCCCACATAAAGTTCTAGCTTGTTG 60.620 44.000 0.00 0.00 0.00 3.33
1 2 4.459337 GCCCACATAAAGTTCTAGCTTGTT 59.541 41.667 0.00 0.00 0.00 2.83
2 3 4.010349 GCCCACATAAAGTTCTAGCTTGT 58.990 43.478 0.00 0.00 0.00 3.16
3 4 4.265073 AGCCCACATAAAGTTCTAGCTTG 58.735 43.478 0.00 0.00 0.00 4.01
4 5 4.576330 AGCCCACATAAAGTTCTAGCTT 57.424 40.909 0.00 0.00 0.00 3.74
5 6 4.576330 AAGCCCACATAAAGTTCTAGCT 57.424 40.909 0.00 0.00 0.00 3.32
6 7 5.671493 TCTAAGCCCACATAAAGTTCTAGC 58.329 41.667 0.00 0.00 0.00 3.42
7 8 7.225538 CACATCTAAGCCCACATAAAGTTCTAG 59.774 40.741 0.00 0.00 0.00 2.43
8 9 7.047891 CACATCTAAGCCCACATAAAGTTCTA 58.952 38.462 0.00 0.00 0.00 2.10
9 10 5.882557 CACATCTAAGCCCACATAAAGTTCT 59.117 40.000 0.00 0.00 0.00 3.01
10 11 5.066505 CCACATCTAAGCCCACATAAAGTTC 59.933 44.000 0.00 0.00 0.00 3.01
11 12 4.949856 CCACATCTAAGCCCACATAAAGTT 59.050 41.667 0.00 0.00 0.00 2.66
12 13 4.526970 CCACATCTAAGCCCACATAAAGT 58.473 43.478 0.00 0.00 0.00 2.66
13 14 3.316308 GCCACATCTAAGCCCACATAAAG 59.684 47.826 0.00 0.00 0.00 1.85
14 15 3.287222 GCCACATCTAAGCCCACATAAA 58.713 45.455 0.00 0.00 0.00 1.40
15 16 2.240921 TGCCACATCTAAGCCCACATAA 59.759 45.455 0.00 0.00 0.00 1.90
16 17 1.843206 TGCCACATCTAAGCCCACATA 59.157 47.619 0.00 0.00 0.00 2.29
17 18 0.625316 TGCCACATCTAAGCCCACAT 59.375 50.000 0.00 0.00 0.00 3.21
18 19 0.403655 TTGCCACATCTAAGCCCACA 59.596 50.000 0.00 0.00 0.00 4.17
19 20 0.811281 GTTGCCACATCTAAGCCCAC 59.189 55.000 0.00 0.00 0.00 4.61
20 21 0.698238 AGTTGCCACATCTAAGCCCA 59.302 50.000 0.00 0.00 0.00 5.36
21 22 1.098050 CAGTTGCCACATCTAAGCCC 58.902 55.000 0.00 0.00 0.00 5.19
22 23 1.470098 CACAGTTGCCACATCTAAGCC 59.530 52.381 0.00 0.00 0.00 4.35
23 24 1.135575 GCACAGTTGCCACATCTAAGC 60.136 52.381 0.00 0.00 43.66 3.09
24 25 2.907910 GCACAGTTGCCACATCTAAG 57.092 50.000 0.00 0.00 43.66 2.18
35 36 4.516698 ACTCCTTACATTTGAGCACAGTTG 59.483 41.667 0.00 0.00 0.00 3.16
36 37 4.718961 ACTCCTTACATTTGAGCACAGTT 58.281 39.130 0.00 0.00 0.00 3.16
37 38 4.202357 TGACTCCTTACATTTGAGCACAGT 60.202 41.667 0.00 0.00 0.00 3.55
38 39 4.318332 TGACTCCTTACATTTGAGCACAG 58.682 43.478 0.00 0.00 0.00 3.66
39 40 4.318332 CTGACTCCTTACATTTGAGCACA 58.682 43.478 0.00 0.00 0.00 4.57
40 41 3.126000 GCTGACTCCTTACATTTGAGCAC 59.874 47.826 0.00 0.00 0.00 4.40
41 42 3.244526 TGCTGACTCCTTACATTTGAGCA 60.245 43.478 0.00 0.00 0.00 4.26
42 43 3.338249 TGCTGACTCCTTACATTTGAGC 58.662 45.455 0.00 0.00 0.00 4.26
43 44 5.163683 CCATTGCTGACTCCTTACATTTGAG 60.164 44.000 0.00 0.00 0.00 3.02
44 45 4.701651 CCATTGCTGACTCCTTACATTTGA 59.298 41.667 0.00 0.00 0.00 2.69
45 46 4.701651 TCCATTGCTGACTCCTTACATTTG 59.298 41.667 0.00 0.00 0.00 2.32
46 47 4.922206 TCCATTGCTGACTCCTTACATTT 58.078 39.130 0.00 0.00 0.00 2.32
47 48 4.574674 TCCATTGCTGACTCCTTACATT 57.425 40.909 0.00 0.00 0.00 2.71
48 49 4.785346 ATCCATTGCTGACTCCTTACAT 57.215 40.909 0.00 0.00 0.00 2.29
49 50 4.574674 AATCCATTGCTGACTCCTTACA 57.425 40.909 0.00 0.00 0.00 2.41
50 51 5.644644 CAAAATCCATTGCTGACTCCTTAC 58.355 41.667 0.00 0.00 0.00 2.34
51 52 5.902613 CAAAATCCATTGCTGACTCCTTA 57.097 39.130 0.00 0.00 0.00 2.69
52 53 4.796038 CAAAATCCATTGCTGACTCCTT 57.204 40.909 0.00 0.00 0.00 3.36
62 63 3.428045 GGAGACCTTCGCAAAATCCATTG 60.428 47.826 0.00 0.00 0.00 2.82
63 64 2.755103 GGAGACCTTCGCAAAATCCATT 59.245 45.455 0.00 0.00 0.00 3.16
64 65 2.025887 AGGAGACCTTCGCAAAATCCAT 60.026 45.455 0.00 0.00 0.00 3.41
65 66 1.351017 AGGAGACCTTCGCAAAATCCA 59.649 47.619 0.00 0.00 0.00 3.41
66 67 2.115343 AGGAGACCTTCGCAAAATCC 57.885 50.000 0.00 0.00 0.00 3.01
67 68 3.371285 GTGTAGGAGACCTTCGCAAAATC 59.629 47.826 0.00 0.00 34.61 2.17
68 69 3.335579 GTGTAGGAGACCTTCGCAAAAT 58.664 45.455 0.00 0.00 34.61 1.82
69 70 2.549349 GGTGTAGGAGACCTTCGCAAAA 60.549 50.000 9.41 0.00 33.94 2.44
70 71 1.001633 GGTGTAGGAGACCTTCGCAAA 59.998 52.381 9.41 0.00 33.94 3.68
71 72 0.606604 GGTGTAGGAGACCTTCGCAA 59.393 55.000 9.41 0.00 33.94 4.85
72 73 1.255667 GGGTGTAGGAGACCTTCGCA 61.256 60.000 9.41 0.00 33.94 5.10
73 74 1.255667 TGGGTGTAGGAGACCTTCGC 61.256 60.000 0.00 0.00 34.61 4.70
74 75 0.531200 GTGGGTGTAGGAGACCTTCG 59.469 60.000 0.00 0.00 34.61 3.79
75 76 0.903236 GGTGGGTGTAGGAGACCTTC 59.097 60.000 0.00 0.00 34.61 3.46
76 77 0.903454 CGGTGGGTGTAGGAGACCTT 60.903 60.000 0.00 0.00 34.61 3.50
77 78 1.305046 CGGTGGGTGTAGGAGACCT 60.305 63.158 0.00 0.00 37.71 3.85
78 79 1.304713 TCGGTGGGTGTAGGAGACC 60.305 63.158 0.00 0.00 0.00 3.85
79 80 0.611340 AGTCGGTGGGTGTAGGAGAC 60.611 60.000 0.00 0.00 0.00 3.36
80 81 0.323178 GAGTCGGTGGGTGTAGGAGA 60.323 60.000 0.00 0.00 0.00 3.71
81 82 1.321074 GGAGTCGGTGGGTGTAGGAG 61.321 65.000 0.00 0.00 0.00 3.69
82 83 1.304713 GGAGTCGGTGGGTGTAGGA 60.305 63.158 0.00 0.00 0.00 2.94
83 84 2.707849 CGGAGTCGGTGGGTGTAGG 61.708 68.421 0.00 0.00 0.00 3.18
84 85 2.882876 CGGAGTCGGTGGGTGTAG 59.117 66.667 0.00 0.00 0.00 2.74
85 86 3.376078 GCGGAGTCGGTGGGTGTA 61.376 66.667 0.00 0.00 36.79 2.90
89 90 4.796231 CTTCGCGGAGTCGGTGGG 62.796 72.222 6.14 0.00 36.79 4.61
91 92 4.717629 TGCTTCGCGGAGTCGGTG 62.718 66.667 17.40 4.95 36.79 4.94
92 93 2.781595 ATTTGCTTCGCGGAGTCGGT 62.782 55.000 17.40 0.00 36.79 4.69
93 94 2.100631 ATTTGCTTCGCGGAGTCGG 61.101 57.895 17.40 0.00 36.79 4.79
94 95 1.059369 CATTTGCTTCGCGGAGTCG 59.941 57.895 17.40 0.00 39.81 4.18
95 96 0.796312 TTCATTTGCTTCGCGGAGTC 59.204 50.000 17.40 9.08 0.00 3.36
96 97 0.798776 CTTCATTTGCTTCGCGGAGT 59.201 50.000 17.40 0.00 0.00 3.85
97 98 0.798776 ACTTCATTTGCTTCGCGGAG 59.201 50.000 10.99 10.99 0.00 4.63
98 99 1.069296 CAACTTCATTTGCTTCGCGGA 60.069 47.619 6.13 0.00 0.00 5.54
99 100 1.330306 CAACTTCATTTGCTTCGCGG 58.670 50.000 6.13 0.00 0.00 6.46
121 122 9.591792 GCTAAAGGATTTCTTTGCTAAATCATT 57.408 29.630 0.00 6.72 44.61 2.57
122 123 7.917505 CGCTAAAGGATTTCTTTGCTAAATCAT 59.082 33.333 0.00 1.32 44.68 2.45
123 124 7.120579 TCGCTAAAGGATTTCTTTGCTAAATCA 59.879 33.333 0.00 0.00 44.68 2.57
124 125 7.472543 TCGCTAAAGGATTTCTTTGCTAAATC 58.527 34.615 0.00 0.00 44.68 2.17
125 126 7.391148 TCGCTAAAGGATTTCTTTGCTAAAT 57.609 32.000 0.00 0.00 44.68 1.40
126 127 6.811253 TCGCTAAAGGATTTCTTTGCTAAA 57.189 33.333 0.00 0.00 44.68 1.85
127 128 6.811253 TTCGCTAAAGGATTTCTTTGCTAA 57.189 33.333 0.00 0.00 44.68 3.09
128 129 6.653320 TCTTTCGCTAAAGGATTTCTTTGCTA 59.347 34.615 10.51 0.00 44.68 3.49
129 130 5.473504 TCTTTCGCTAAAGGATTTCTTTGCT 59.526 36.000 10.51 0.00 44.68 3.91
130 131 5.699839 TCTTTCGCTAAAGGATTTCTTTGC 58.300 37.500 10.51 1.88 44.68 3.68
131 132 7.363431 AGTTCTTTCGCTAAAGGATTTCTTTG 58.637 34.615 10.51 0.00 44.68 2.77
132 133 7.511959 AGTTCTTTCGCTAAAGGATTTCTTT 57.488 32.000 10.51 0.00 46.49 2.52
133 134 7.445707 AGAAGTTCTTTCGCTAAAGGATTTCTT 59.554 33.333 18.57 8.02 46.95 2.52
134 135 6.937465 AGAAGTTCTTTCGCTAAAGGATTTCT 59.063 34.615 18.57 18.57 45.50 2.52
135 136 7.135089 AGAAGTTCTTTCGCTAAAGGATTTC 57.865 36.000 15.50 15.50 42.84 2.17
136 137 8.617290 TTAGAAGTTCTTTCGCTAAAGGATTT 57.383 30.769 11.40 5.29 42.09 2.17
137 138 8.617290 TTTAGAAGTTCTTTCGCTAAAGGATT 57.383 30.769 11.40 0.00 42.09 3.01
138 139 7.878644 ACTTTAGAAGTTCTTTCGCTAAAGGAT 59.121 33.333 20.07 5.32 39.04 3.24
139 140 7.215085 ACTTTAGAAGTTCTTTCGCTAAAGGA 58.785 34.615 20.07 0.00 39.04 3.36
140 141 7.422878 ACTTTAGAAGTTCTTTCGCTAAAGG 57.577 36.000 20.07 8.42 39.04 3.11
167 168 3.372440 AATCAAGGAACATGGAGTCCC 57.628 47.619 6.74 0.00 0.00 4.46
168 169 7.410120 AATAAAATCAAGGAACATGGAGTCC 57.590 36.000 0.73 0.73 0.00 3.85
169 170 8.743714 AGAAATAAAATCAAGGAACATGGAGTC 58.256 33.333 0.00 0.00 0.00 3.36
170 171 8.655935 AGAAATAAAATCAAGGAACATGGAGT 57.344 30.769 0.00 0.00 0.00 3.85
177 178 9.817809 GGGGAATAAGAAATAAAATCAAGGAAC 57.182 33.333 0.00 0.00 0.00 3.62
178 179 9.782900 AGGGGAATAAGAAATAAAATCAAGGAA 57.217 29.630 0.00 0.00 0.00 3.36
179 180 9.200817 CAGGGGAATAAGAAATAAAATCAAGGA 57.799 33.333 0.00 0.00 0.00 3.36
180 181 8.981659 ACAGGGGAATAAGAAATAAAATCAAGG 58.018 33.333 0.00 0.00 0.00 3.61
191 192 9.831682 AAAGGTTATTTACAGGGGAATAAGAAA 57.168 29.630 0.00 0.00 30.69 2.52
192 193 9.831682 AAAAGGTTATTTACAGGGGAATAAGAA 57.168 29.630 0.00 0.00 30.69 2.52
193 194 9.831682 AAAAAGGTTATTTACAGGGGAATAAGA 57.168 29.630 0.00 0.00 30.69 2.10
228 229 9.850628 TGAAAGCATCAAGATTTTATTTCTCAG 57.149 29.630 0.00 0.00 35.66 3.35
229 230 9.850628 CTGAAAGCATCAAGATTTTATTTCTCA 57.149 29.630 0.00 0.00 35.66 3.27
237 238 9.603921 TTCTTTTTCTGAAAGCATCAAGATTTT 57.396 25.926 12.46 0.00 35.66 1.82
238 239 9.038803 GTTCTTTTTCTGAAAGCATCAAGATTT 57.961 29.630 12.46 0.00 38.82 2.17
239 240 8.419442 AGTTCTTTTTCTGAAAGCATCAAGATT 58.581 29.630 12.46 4.99 37.67 2.40
240 241 7.949434 AGTTCTTTTTCTGAAAGCATCAAGAT 58.051 30.769 12.46 0.75 37.67 2.40
241 242 7.338800 AGTTCTTTTTCTGAAAGCATCAAGA 57.661 32.000 9.14 9.14 37.67 3.02
242 243 7.998753 AAGTTCTTTTTCTGAAAGCATCAAG 57.001 32.000 2.75 4.38 37.67 3.02
243 244 9.301153 GTTAAGTTCTTTTTCTGAAAGCATCAA 57.699 29.630 2.75 0.00 37.67 2.57
244 245 8.465999 TGTTAAGTTCTTTTTCTGAAAGCATCA 58.534 29.630 2.75 0.00 36.38 3.07
245 246 8.856490 TGTTAAGTTCTTTTTCTGAAAGCATC 57.144 30.769 2.75 0.00 0.00 3.91
246 247 9.087424 GTTGTTAAGTTCTTTTTCTGAAAGCAT 57.913 29.630 2.75 0.00 0.00 3.79
247 248 8.085296 TGTTGTTAAGTTCTTTTTCTGAAAGCA 58.915 29.630 2.75 0.00 0.00 3.91
248 249 8.460831 TGTTGTTAAGTTCTTTTTCTGAAAGC 57.539 30.769 2.75 0.00 0.00 3.51
252 253 9.787532 CTGAATGTTGTTAAGTTCTTTTTCTGA 57.212 29.630 0.00 0.00 0.00 3.27
253 254 8.534778 GCTGAATGTTGTTAAGTTCTTTTTCTG 58.465 33.333 0.00 0.00 0.00 3.02
254 255 7.706607 GGCTGAATGTTGTTAAGTTCTTTTTCT 59.293 33.333 0.00 0.00 0.00 2.52
255 256 7.042725 GGGCTGAATGTTGTTAAGTTCTTTTTC 60.043 37.037 0.00 0.00 0.00 2.29
256 257 6.761242 GGGCTGAATGTTGTTAAGTTCTTTTT 59.239 34.615 0.00 0.00 0.00 1.94
257 258 6.098266 AGGGCTGAATGTTGTTAAGTTCTTTT 59.902 34.615 0.00 0.00 0.00 2.27
258 259 5.598417 AGGGCTGAATGTTGTTAAGTTCTTT 59.402 36.000 0.00 0.00 0.00 2.52
259 260 5.140454 AGGGCTGAATGTTGTTAAGTTCTT 58.860 37.500 0.00 0.00 0.00 2.52
260 261 4.729868 AGGGCTGAATGTTGTTAAGTTCT 58.270 39.130 0.00 0.00 0.00 3.01
261 262 4.518970 TGAGGGCTGAATGTTGTTAAGTTC 59.481 41.667 0.00 0.00 0.00 3.01
262 263 4.469657 TGAGGGCTGAATGTTGTTAAGTT 58.530 39.130 0.00 0.00 0.00 2.66
263 264 4.098914 TGAGGGCTGAATGTTGTTAAGT 57.901 40.909 0.00 0.00 0.00 2.24
301 302 2.434185 CTTGTTAGCGGCGGCAGA 60.434 61.111 19.21 2.75 43.41 4.26
303 304 2.434185 CTCTTGTTAGCGGCGGCA 60.434 61.111 19.21 1.65 43.41 5.69
304 305 1.574702 AAACTCTTGTTAGCGGCGGC 61.575 55.000 9.78 8.43 34.96 6.53
306 307 2.063266 TGTAAACTCTTGTTAGCGGCG 58.937 47.619 0.51 0.51 34.96 6.46
307 308 3.323243 TCTGTAAACTCTTGTTAGCGGC 58.677 45.455 0.00 0.00 34.96 6.53
348 349 6.346518 CCCGTTCAAAATAACAGTTTTGCATC 60.347 38.462 7.11 1.33 44.65 3.91
350 351 4.806247 CCCGTTCAAAATAACAGTTTTGCA 59.194 37.500 7.11 0.00 44.65 4.08
357 358 8.512138 AGATTCTTTACCCGTTCAAAATAACAG 58.488 33.333 0.00 0.00 0.00 3.16
359 360 9.983804 CTAGATTCTTTACCCGTTCAAAATAAC 57.016 33.333 0.00 0.00 0.00 1.89
360 361 9.729281 ACTAGATTCTTTACCCGTTCAAAATAA 57.271 29.630 0.00 0.00 0.00 1.40
383 387 1.151777 GCTAAATCTGCCGCGCACTA 61.152 55.000 8.75 0.00 33.79 2.74
386 390 3.563088 CGCTAAATCTGCCGCGCA 61.563 61.111 8.75 1.04 39.11 6.09
399 403 4.637276 TCTTCATTCACTGGTTTTCGCTA 58.363 39.130 0.00 0.00 0.00 4.26
416 420 1.135527 ACAACGACGTTGGACTCTTCA 59.864 47.619 36.06 0.00 46.50 3.02
433 437 4.612279 ACATGGGGCGGGCAACAA 62.612 61.111 3.27 0.00 39.74 2.83
448 452 2.712539 CTTTCAACACGGCGCACA 59.287 55.556 10.83 0.00 0.00 4.57
508 512 5.049405 CCGGATAATAATTTGTCCTGTCAGC 60.049 44.000 0.00 0.00 40.11 4.26
514 518 3.499745 GGGGCCGGATAATAATTTGTCCT 60.500 47.826 5.05 0.00 40.11 3.85
515 519 2.823747 GGGGCCGGATAATAATTTGTCC 59.176 50.000 5.05 0.00 39.18 4.02
519 523 3.621682 TTGGGGGCCGGATAATAATTT 57.378 42.857 5.05 0.00 0.00 1.82
520 524 3.621682 TTTGGGGGCCGGATAATAATT 57.378 42.857 5.05 0.00 0.00 1.40
521 525 3.621682 TTTTGGGGGCCGGATAATAAT 57.378 42.857 5.05 0.00 0.00 1.28
522 526 3.399952 TTTTTGGGGGCCGGATAATAA 57.600 42.857 5.05 0.00 0.00 1.40
545 566 0.460987 CTGGACGAAGGATGGACTGC 60.461 60.000 0.00 0.00 0.00 4.40
546 567 0.460987 GCTGGACGAAGGATGGACTG 60.461 60.000 0.00 0.00 0.00 3.51
547 568 1.901085 GCTGGACGAAGGATGGACT 59.099 57.895 0.00 0.00 0.00 3.85
548 569 4.522971 GCTGGACGAAGGATGGAC 57.477 61.111 0.00 0.00 0.00 4.02
559 580 3.665675 AACGATCCTGCCGCTGGAC 62.666 63.158 20.21 13.12 34.44 4.02
560 581 2.463589 AAAACGATCCTGCCGCTGGA 62.464 55.000 20.09 20.09 36.01 3.86
561 582 1.982073 GAAAACGATCCTGCCGCTGG 61.982 60.000 9.98 9.98 0.00 4.85
562 583 1.021390 AGAAAACGATCCTGCCGCTG 61.021 55.000 0.00 0.00 0.00 5.18
563 584 1.021390 CAGAAAACGATCCTGCCGCT 61.021 55.000 0.00 0.00 0.00 5.52
564 585 1.425428 CAGAAAACGATCCTGCCGC 59.575 57.895 0.00 0.00 0.00 6.53
565 586 1.425428 GCAGAAAACGATCCTGCCG 59.575 57.895 9.11 0.00 45.38 5.69
568 589 1.425428 GCGGCAGAAAACGATCCTG 59.575 57.895 0.00 0.00 0.00 3.86
569 590 1.745489 GGCGGCAGAAAACGATCCT 60.745 57.895 3.07 0.00 0.00 3.24
570 591 2.761195 GGGCGGCAGAAAACGATCC 61.761 63.158 12.47 0.00 0.00 3.36
571 592 2.761195 GGGGCGGCAGAAAACGATC 61.761 63.158 12.47 0.00 0.00 3.69
572 593 2.750237 GGGGCGGCAGAAAACGAT 60.750 61.111 12.47 0.00 0.00 3.73
634 661 0.103937 GCTCTCCGGTCTTCATCCAG 59.896 60.000 0.00 0.00 0.00 3.86
635 662 1.667154 CGCTCTCCGGTCTTCATCCA 61.667 60.000 0.00 0.00 0.00 3.41
636 663 1.066587 CGCTCTCCGGTCTTCATCC 59.933 63.158 0.00 0.00 0.00 3.51
637 664 1.590259 GCGCTCTCCGGTCTTCATC 60.590 63.158 0.00 0.00 37.44 2.92
638 665 2.496817 GCGCTCTCCGGTCTTCAT 59.503 61.111 0.00 0.00 37.44 2.57
655 682 3.431725 GTTTCAGCTTCGGGCCCG 61.432 66.667 39.13 39.13 43.05 6.13
658 685 2.861006 GTCGTTTCAGCTTCGGGC 59.139 61.111 0.00 0.00 42.19 6.13
659 686 0.942410 TTCGTCGTTTCAGCTTCGGG 60.942 55.000 0.00 0.00 0.00 5.14
661 688 0.161024 GGTTCGTCGTTTCAGCTTCG 59.839 55.000 0.00 0.00 0.00 3.79
662 689 0.511653 GGGTTCGTCGTTTCAGCTTC 59.488 55.000 0.00 0.00 0.00 3.86
663 690 1.219522 CGGGTTCGTCGTTTCAGCTT 61.220 55.000 0.00 0.00 0.00 3.74
664 691 1.663702 CGGGTTCGTCGTTTCAGCT 60.664 57.895 0.00 0.00 0.00 4.24
665 692 2.851104 CGGGTTCGTCGTTTCAGC 59.149 61.111 0.00 0.00 0.00 4.26
666 693 1.492319 TTGCGGGTTCGTCGTTTCAG 61.492 55.000 0.00 0.00 38.89 3.02
667 694 1.088340 TTTGCGGGTTCGTCGTTTCA 61.088 50.000 0.00 0.00 38.89 2.69
668 695 0.655337 GTTTGCGGGTTCGTCGTTTC 60.655 55.000 0.00 0.00 38.89 2.78
669 696 1.352753 GTTTGCGGGTTCGTCGTTT 59.647 52.632 0.00 0.00 38.89 3.60
670 697 1.768112 CTGTTTGCGGGTTCGTCGTT 61.768 55.000 0.00 0.00 38.89 3.85
672 699 2.549282 CTGTTTGCGGGTTCGTCG 59.451 61.111 0.00 0.00 38.89 5.12
673 700 2.054140 TTGCTGTTTGCGGGTTCGTC 62.054 55.000 0.00 0.00 46.63 4.20
675 702 1.657181 GTTGCTGTTTGCGGGTTCG 60.657 57.895 0.00 0.00 46.63 3.95
678 705 3.119193 CTGTTGCTGTTTGCGGGT 58.881 55.556 0.00 0.00 46.63 5.28
691 725 0.178873 TCTCCCCAACCCTAGCTGTT 60.179 55.000 0.00 0.00 0.00 3.16
695 729 1.988406 ACGTCTCCCCAACCCTAGC 60.988 63.158 0.00 0.00 0.00 3.42
697 731 0.901580 GACACGTCTCCCCAACCCTA 60.902 60.000 0.00 0.00 0.00 3.53
698 732 2.122547 ACACGTCTCCCCAACCCT 60.123 61.111 0.00 0.00 0.00 4.34
699 733 2.047213 TTGACACGTCTCCCCAACCC 62.047 60.000 0.00 0.00 0.00 4.11
702 736 1.052124 ACCTTGACACGTCTCCCCAA 61.052 55.000 0.00 0.00 0.00 4.12
703 737 1.458777 ACCTTGACACGTCTCCCCA 60.459 57.895 0.00 0.00 0.00 4.96
704 738 1.004918 CACCTTGACACGTCTCCCC 60.005 63.158 0.00 0.00 0.00 4.81
711 745 0.580104 GTTCGGTTCACCTTGACACG 59.420 55.000 0.00 0.00 0.00 4.49
716 750 2.613506 GCGGGTTCGGTTCACCTTG 61.614 63.158 0.00 0.00 36.79 3.61
717 751 2.281276 GCGGGTTCGGTTCACCTT 60.281 61.111 0.00 0.00 36.79 3.50
719 753 3.351416 GTGCGGGTTCGGTTCACC 61.351 66.667 0.00 0.00 36.79 4.02
721 755 2.280524 CAGTGCGGGTTCGGTTCA 60.281 61.111 0.00 0.00 36.79 3.18
722 756 2.027625 CTCAGTGCGGGTTCGGTTC 61.028 63.158 0.00 0.00 36.79 3.62
723 757 2.030562 CTCAGTGCGGGTTCGGTT 59.969 61.111 0.00 0.00 36.79 4.44
734 768 3.184683 GCGCCGAGAAGCTCAGTG 61.185 66.667 0.00 0.00 0.00 3.66
735 769 4.443266 GGCGCCGAGAAGCTCAGT 62.443 66.667 12.58 0.00 0.00 3.41
750 871 3.467803 GGCTGGGTGATATATATTCGGC 58.532 50.000 0.00 4.62 0.00 5.54
772 899 1.528309 GACAGTGTTGGTGTGGGGG 60.528 63.158 0.00 0.00 0.00 5.40
773 900 0.819259 CTGACAGTGTTGGTGTGGGG 60.819 60.000 0.00 0.00 0.00 4.96
774 901 0.107214 ACTGACAGTGTTGGTGTGGG 60.107 55.000 7.47 0.00 0.00 4.61
815 942 1.528824 CTGGGGGTATCAGTGCAGG 59.471 63.158 0.00 0.00 0.00 4.85
864 1000 0.117541 TGCTGGGGGACTACTGGTAA 59.882 55.000 0.00 0.00 0.00 2.85
874 1010 0.178992 CTTCTTTGTGTGCTGGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
879 1015 0.031178 GGGTGCTTCTTTGTGTGCTG 59.969 55.000 0.00 0.00 0.00 4.41
880 1016 1.447317 CGGGTGCTTCTTTGTGTGCT 61.447 55.000 0.00 0.00 0.00 4.40
881 1017 1.008538 CGGGTGCTTCTTTGTGTGC 60.009 57.895 0.00 0.00 0.00 4.57
886 1043 4.404654 GCGCCGGGTGCTTCTTTG 62.405 66.667 24.73 0.00 38.05 2.77
911 1078 1.593196 TTCTTTCTTGGTGGCGAGTG 58.407 50.000 0.00 0.00 0.00 3.51
971 1143 4.111016 CTGCGGCCGTAGTCGTCA 62.111 66.667 32.20 16.34 35.01 4.35
996 1168 2.824041 GTAGCCGTGGCCATGGTG 60.824 66.667 38.39 19.60 43.17 4.17
1001 1173 3.702048 GACCAGTAGCCGTGGCCA 61.702 66.667 0.00 0.00 43.17 5.36
1088 1284 3.050275 GCTTTCGGTGCGCCTTCT 61.050 61.111 15.69 0.00 0.00 2.85
1163 1386 4.873810 ACCTTGCTGTGCCACGCA 62.874 61.111 9.66 9.66 35.60 5.24
1174 1400 3.479269 CTTCGACGCCGACCTTGC 61.479 66.667 0.00 0.00 45.50 4.01
1190 1416 3.691342 TAGTCGCCGTTGCCAGCT 61.691 61.111 0.00 0.00 0.00 4.24
1193 1419 2.356553 GTGTAGTCGCCGTTGCCA 60.357 61.111 0.00 0.00 0.00 4.92
1303 1550 0.747283 ACTAGCCACCTCGTACCTCG 60.747 60.000 0.00 0.00 41.41 4.63
1304 1551 1.023502 GACTAGCCACCTCGTACCTC 58.976 60.000 0.00 0.00 0.00 3.85
1311 1580 1.760192 TCCTAACGACTAGCCACCTC 58.240 55.000 0.00 0.00 0.00 3.85
1313 1582 3.552478 GCTAATCCTAACGACTAGCCACC 60.552 52.174 0.00 0.00 30.87 4.61
1314 1583 3.318557 AGCTAATCCTAACGACTAGCCAC 59.681 47.826 0.00 0.00 36.47 5.01
1315 1584 3.563223 AGCTAATCCTAACGACTAGCCA 58.437 45.455 0.00 0.00 36.47 4.75
1316 1585 5.002516 TCTAGCTAATCCTAACGACTAGCC 58.997 45.833 0.00 0.00 36.47 3.93
1367 1639 3.516700 GCAGTACTAGTGTTTAGGGGGAA 59.483 47.826 5.39 0.00 0.00 3.97
1383 1675 0.248843 AGCAGAAGCAGAGGCAGTAC 59.751 55.000 0.00 0.00 45.49 2.73
1407 1699 0.663153 GAACAAAACAGAGCTGCCGT 59.337 50.000 0.00 0.00 0.00 5.68
1409 1701 1.678101 ACAGAACAAAACAGAGCTGCC 59.322 47.619 0.00 0.00 0.00 4.85
1477 1772 1.066573 AGCAGATTGGAAGACGACTGG 60.067 52.381 0.00 0.00 0.00 4.00
1507 1802 3.551046 CCTCTCACACACAGACACACTAC 60.551 52.174 0.00 0.00 0.00 2.73
1508 1803 2.623416 CCTCTCACACACAGACACACTA 59.377 50.000 0.00 0.00 0.00 2.74
1554 1864 4.021916 CTGGAAAAATCATGGAGGCTCTT 58.978 43.478 15.23 0.00 0.00 2.85
1708 2049 7.177216 ACAGAGATGGAGACTCATATGAGATTC 59.823 40.741 34.16 27.16 44.74 2.52
1716 2058 6.897966 AGGTAAAACAGAGATGGAGACTCATA 59.102 38.462 4.53 0.00 36.91 2.15
1738 2080 4.510167 AGATAAGCCACTTGCAATAGGT 57.490 40.909 16.07 1.98 44.83 3.08
1744 2086 4.695455 GTGAAGTTAGATAAGCCACTTGCA 59.305 41.667 0.00 0.00 44.83 4.08
1745 2087 4.938226 AGTGAAGTTAGATAAGCCACTTGC 59.062 41.667 0.00 0.00 41.71 4.01
1746 2088 6.166279 TCAGTGAAGTTAGATAAGCCACTTG 58.834 40.000 0.00 0.00 31.85 3.16
1747 2089 6.360370 TCAGTGAAGTTAGATAAGCCACTT 57.640 37.500 0.00 0.00 31.85 3.16
1756 2099 7.238486 AGTGAGTGAATCAGTGAAGTTAGAT 57.762 36.000 0.00 0.00 40.23 1.98
1760 2103 5.923204 AGAAGTGAGTGAATCAGTGAAGTT 58.077 37.500 0.00 0.00 40.90 2.66
1766 2109 5.336372 GCTAGTGAGAAGTGAGTGAATCAGT 60.336 44.000 0.00 0.00 43.78 3.41
1769 2112 4.081972 TGGCTAGTGAGAAGTGAGTGAATC 60.082 45.833 0.00 0.00 0.00 2.52
1776 2119 1.970640 TGCTTGGCTAGTGAGAAGTGA 59.029 47.619 0.00 0.00 0.00 3.41
1797 2140 2.195741 TTGCTGCTGCTCTCAAGAAT 57.804 45.000 17.00 0.00 40.48 2.40
1798 2141 1.878088 CTTTGCTGCTGCTCTCAAGAA 59.122 47.619 17.00 0.00 40.48 2.52
1801 2144 2.195741 ATCTTTGCTGCTGCTCTCAA 57.804 45.000 17.00 0.00 40.48 3.02
1802 2145 3.555527 ATATCTTTGCTGCTGCTCTCA 57.444 42.857 17.00 0.00 40.48 3.27
1803 2146 4.897025 AAATATCTTTGCTGCTGCTCTC 57.103 40.909 17.00 0.00 40.48 3.20
1804 2147 6.735145 GCAATAAATATCTTTGCTGCTGCTCT 60.735 38.462 17.00 0.00 41.86 4.09
1805 2148 5.401674 GCAATAAATATCTTTGCTGCTGCTC 59.598 40.000 17.00 0.00 41.86 4.26
1806 2149 5.287226 GCAATAAATATCTTTGCTGCTGCT 58.713 37.500 17.00 0.00 41.86 4.24
1807 2150 5.571778 GCAATAAATATCTTTGCTGCTGC 57.428 39.130 8.89 8.89 41.86 5.25
1813 2156 6.044682 ACCAGCAAGCAATAAATATCTTTGC 58.955 36.000 8.43 8.43 44.67 3.68
1814 2157 8.623903 TCTACCAGCAAGCAATAAATATCTTTG 58.376 33.333 0.00 0.00 0.00 2.77
1815 2158 8.752005 TCTACCAGCAAGCAATAAATATCTTT 57.248 30.769 0.00 0.00 0.00 2.52
1816 2159 8.930846 ATCTACCAGCAAGCAATAAATATCTT 57.069 30.769 0.00 0.00 0.00 2.40
1817 2160 8.159447 TGATCTACCAGCAAGCAATAAATATCT 58.841 33.333 0.00 0.00 0.00 1.98
1818 2161 8.327941 TGATCTACCAGCAAGCAATAAATATC 57.672 34.615 0.00 0.00 0.00 1.63
1819 2162 8.571336 GTTGATCTACCAGCAAGCAATAAATAT 58.429 33.333 0.00 0.00 0.00 1.28
1820 2163 7.775093 AGTTGATCTACCAGCAAGCAATAAATA 59.225 33.333 3.54 0.00 0.00 1.40
1821 2164 6.604795 AGTTGATCTACCAGCAAGCAATAAAT 59.395 34.615 3.54 0.00 0.00 1.40
1822 2165 5.945784 AGTTGATCTACCAGCAAGCAATAAA 59.054 36.000 3.54 0.00 0.00 1.40
1823 2166 5.500234 AGTTGATCTACCAGCAAGCAATAA 58.500 37.500 3.54 0.00 0.00 1.40
1824 2167 5.102953 AGTTGATCTACCAGCAAGCAATA 57.897 39.130 3.54 0.00 0.00 1.90
1825 2168 3.960571 AGTTGATCTACCAGCAAGCAAT 58.039 40.909 3.54 0.00 0.00 3.56
1826 2169 3.423539 AGTTGATCTACCAGCAAGCAA 57.576 42.857 3.54 0.00 0.00 3.91
1827 2170 3.861840 GTAGTTGATCTACCAGCAAGCA 58.138 45.455 3.54 0.00 42.13 3.91
1836 2179 4.142447 TGTTCCGAGCAGTAGTTGATCTAC 60.142 45.833 0.00 0.00 46.68 2.59
1837 2180 4.014406 TGTTCCGAGCAGTAGTTGATCTA 58.986 43.478 0.00 0.00 40.06 1.98
1838 2181 2.826128 TGTTCCGAGCAGTAGTTGATCT 59.174 45.455 0.00 0.00 40.06 2.75
1839 2182 3.119459 TCTGTTCCGAGCAGTAGTTGATC 60.119 47.826 11.54 0.00 38.84 2.92
1859 2202 1.303309 GCAATAATGTGCCGAGCTCT 58.697 50.000 12.85 0.00 38.66 4.09
1860 2203 1.016627 TGCAATAATGTGCCGAGCTC 58.983 50.000 2.73 2.73 44.26 4.09
1861 2204 0.734889 GTGCAATAATGTGCCGAGCT 59.265 50.000 0.00 0.00 44.26 4.09
1862 2205 0.734889 AGTGCAATAATGTGCCGAGC 59.265 50.000 0.00 0.00 44.26 5.03
1863 2206 2.009051 TCAGTGCAATAATGTGCCGAG 58.991 47.619 0.00 0.00 44.26 4.63
1865 2208 3.181498 TGAATCAGTGCAATAATGTGCCG 60.181 43.478 0.00 0.00 44.26 5.69
1866 2209 4.096833 TCTGAATCAGTGCAATAATGTGCC 59.903 41.667 10.36 0.00 44.26 5.01
1867 2210 5.239359 TCTGAATCAGTGCAATAATGTGC 57.761 39.130 10.36 0.00 45.15 4.57
1868 2211 9.961265 AATATTCTGAATCAGTGCAATAATGTG 57.039 29.630 10.36 0.00 32.61 3.21
1886 2229 9.831737 CAGTTGGTCTGTTTAGAAAATATTCTG 57.168 33.333 1.47 0.00 41.16 3.02
1904 2247 5.163754 CGGAATCCAGATTTAACAGTTGGTC 60.164 44.000 0.00 0.00 0.00 4.02
1906 2249 4.700213 ACGGAATCCAGATTTAACAGTTGG 59.300 41.667 0.00 0.00 0.00 3.77
1908 2251 9.847224 AATATACGGAATCCAGATTTAACAGTT 57.153 29.630 0.00 0.00 0.00 3.16
1948 2423 7.040271 TTTTATTTATAAAGTCGGCCTATGGCC 60.040 37.037 17.08 17.08 46.84 5.36
1954 2429 7.558444 TGGTGATTTTATTTATAAAGTCGGCCT 59.442 33.333 19.33 0.00 40.04 5.19
1955 2430 7.708998 TGGTGATTTTATTTATAAAGTCGGCC 58.291 34.615 3.94 15.75 40.04 6.13
1956 2431 7.860872 CCTGGTGATTTTATTTATAAAGTCGGC 59.139 37.037 3.94 7.71 40.04 5.54
1957 2432 7.860872 GCCTGGTGATTTTATTTATAAAGTCGG 59.139 37.037 3.94 8.17 40.04 4.79
1958 2433 8.402472 TGCCTGGTGATTTTATTTATAAAGTCG 58.598 33.333 3.94 0.00 40.04 4.18
1959 2434 9.736023 CTGCCTGGTGATTTTATTTATAAAGTC 57.264 33.333 3.94 9.52 38.61 3.01
1960 2435 9.474313 TCTGCCTGGTGATTTTATTTATAAAGT 57.526 29.630 3.94 0.00 34.13 2.66
1961 2436 9.956720 CTCTGCCTGGTGATTTTATTTATAAAG 57.043 33.333 3.94 0.00 34.13 1.85
1963 2438 9.474313 AACTCTGCCTGGTGATTTTATTTATAA 57.526 29.630 0.00 0.00 0.00 0.98
1966 2441 8.736244 GTTAACTCTGCCTGGTGATTTTATTTA 58.264 33.333 0.00 0.00 0.00 1.40
1967 2442 7.232534 TGTTAACTCTGCCTGGTGATTTTATTT 59.767 33.333 7.22 0.00 0.00 1.40
1968 2443 6.719370 TGTTAACTCTGCCTGGTGATTTTATT 59.281 34.615 7.22 0.00 0.00 1.40
1969 2444 6.245408 TGTTAACTCTGCCTGGTGATTTTAT 58.755 36.000 7.22 0.00 0.00 1.40
1970 2445 5.626142 TGTTAACTCTGCCTGGTGATTTTA 58.374 37.500 7.22 0.00 0.00 1.52
1972 2447 4.098914 TGTTAACTCTGCCTGGTGATTT 57.901 40.909 7.22 0.00 0.00 2.17
1974 2449 4.716784 TCTATGTTAACTCTGCCTGGTGAT 59.283 41.667 7.22 0.00 0.00 3.06
1975 2450 4.081642 GTCTATGTTAACTCTGCCTGGTGA 60.082 45.833 7.22 0.00 0.00 4.02
1976 2451 4.184629 GTCTATGTTAACTCTGCCTGGTG 58.815 47.826 7.22 0.00 0.00 4.17
1977 2452 3.197983 GGTCTATGTTAACTCTGCCTGGT 59.802 47.826 7.22 0.00 0.00 4.00
1978 2453 3.432326 GGGTCTATGTTAACTCTGCCTGG 60.432 52.174 7.22 0.00 0.00 4.45
1981 2456 3.906720 TGGGTCTATGTTAACTCTGCC 57.093 47.619 7.22 3.15 0.00 4.85
1983 2458 7.155328 GGTCATATGGGTCTATGTTAACTCTG 58.845 42.308 7.22 0.00 32.13 3.35
1984 2459 6.844388 TGGTCATATGGGTCTATGTTAACTCT 59.156 38.462 7.22 0.00 32.13 3.24
1985 2460 7.062749 TGGTCATATGGGTCTATGTTAACTC 57.937 40.000 7.22 0.00 32.13 3.01
1986 2461 6.464465 GCTGGTCATATGGGTCTATGTTAACT 60.464 42.308 7.22 0.00 32.13 2.24
1988 2463 5.368230 TGCTGGTCATATGGGTCTATGTTAA 59.632 40.000 2.13 0.00 32.13 2.01
1990 2465 3.716353 TGCTGGTCATATGGGTCTATGTT 59.284 43.478 2.13 0.00 32.13 2.71
1991 2466 3.071602 GTGCTGGTCATATGGGTCTATGT 59.928 47.826 2.13 0.00 32.13 2.29
1993 2468 2.300152 CGTGCTGGTCATATGGGTCTAT 59.700 50.000 2.13 0.00 0.00 1.98
1994 2469 1.686587 CGTGCTGGTCATATGGGTCTA 59.313 52.381 2.13 0.00 0.00 2.59
1995 2470 0.465705 CGTGCTGGTCATATGGGTCT 59.534 55.000 2.13 0.00 0.00 3.85
1996 2471 0.464036 TCGTGCTGGTCATATGGGTC 59.536 55.000 2.13 0.00 0.00 4.46
1997 2472 0.465705 CTCGTGCTGGTCATATGGGT 59.534 55.000 2.13 0.00 0.00 4.51
2000 2475 2.892374 TGTTCTCGTGCTGGTCATATG 58.108 47.619 0.00 0.00 0.00 1.78
2001 2476 3.461061 CATGTTCTCGTGCTGGTCATAT 58.539 45.455 0.00 0.00 0.00 1.78
2002 2477 2.892374 CATGTTCTCGTGCTGGTCATA 58.108 47.619 0.00 0.00 0.00 2.15
2003 2478 1.730501 CATGTTCTCGTGCTGGTCAT 58.269 50.000 0.00 0.00 0.00 3.06
2004 2479 3.215642 CATGTTCTCGTGCTGGTCA 57.784 52.632 0.00 0.00 0.00 4.02
2017 5576 3.264193 TCTGGGTTGATACTCTGCATGTT 59.736 43.478 0.00 0.00 0.00 2.71
2018 5577 2.840038 TCTGGGTTGATACTCTGCATGT 59.160 45.455 0.00 0.00 0.00 3.21
2020 5579 2.840038 TGTCTGGGTTGATACTCTGCAT 59.160 45.455 0.00 0.00 0.00 3.96
2021 5580 2.256306 TGTCTGGGTTGATACTCTGCA 58.744 47.619 0.00 0.00 0.00 4.41
2025 5584 2.993899 CGTGTTGTCTGGGTTGATACTC 59.006 50.000 0.00 0.00 0.00 2.59
2027 5586 2.993899 CTCGTGTTGTCTGGGTTGATAC 59.006 50.000 0.00 0.00 0.00 2.24
2028 5587 2.894765 TCTCGTGTTGTCTGGGTTGATA 59.105 45.455 0.00 0.00 0.00 2.15
2029 5588 1.691976 TCTCGTGTTGTCTGGGTTGAT 59.308 47.619 0.00 0.00 0.00 2.57
2030 5589 1.068588 CTCTCGTGTTGTCTGGGTTGA 59.931 52.381 0.00 0.00 0.00 3.18
2032 5591 1.410004 TCTCTCGTGTTGTCTGGGTT 58.590 50.000 0.00 0.00 0.00 4.11
2036 5595 5.303747 AGACTATTCTCTCGTGTTGTCTG 57.696 43.478 0.00 0.00 33.09 3.51
2037 5596 6.655848 ACTTAGACTATTCTCTCGTGTTGTCT 59.344 38.462 0.00 0.00 37.33 3.41
2042 5601 7.012515 CCATGTACTTAGACTATTCTCTCGTGT 59.987 40.741 0.00 0.00 32.75 4.49
2047 5606 7.014808 GGAAGCCATGTACTTAGACTATTCTCT 59.985 40.741 0.00 0.00 32.75 3.10
2048 5607 7.149307 GGAAGCCATGTACTTAGACTATTCTC 58.851 42.308 0.00 0.00 32.75 2.87
2049 5608 6.611642 TGGAAGCCATGTACTTAGACTATTCT 59.388 38.462 0.00 0.00 35.66 2.40
2050 5609 6.817184 TGGAAGCCATGTACTTAGACTATTC 58.183 40.000 0.00 0.00 0.00 1.75
2053 5612 5.395324 GCTTGGAAGCCATGTACTTAGACTA 60.395 44.000 0.00 0.00 46.20 2.59
2054 5613 4.624125 GCTTGGAAGCCATGTACTTAGACT 60.624 45.833 0.00 0.00 46.20 3.24
2055 5614 3.623510 GCTTGGAAGCCATGTACTTAGAC 59.376 47.826 0.00 0.00 46.20 2.59
2056 5615 3.873910 GCTTGGAAGCCATGTACTTAGA 58.126 45.455 0.00 0.00 46.20 2.10
2078 5637 1.738099 GCCTGTGAGCCGTGTACTG 60.738 63.158 0.00 0.00 0.00 2.74
2079 5638 2.657237 GCCTGTGAGCCGTGTACT 59.343 61.111 0.00 0.00 0.00 2.73
2087 5646 3.075005 TACCTCCGGCCTGTGAGC 61.075 66.667 0.00 0.00 0.00 4.26
2090 5649 0.108138 CTTTCTACCTCCGGCCTGTG 60.108 60.000 0.00 0.00 0.00 3.66
2091 5650 0.252103 TCTTTCTACCTCCGGCCTGT 60.252 55.000 0.00 0.00 0.00 4.00
2094 5653 3.323979 TCATTATCTTTCTACCTCCGGCC 59.676 47.826 0.00 0.00 0.00 6.13
2096 5655 5.467063 GCTTTCATTATCTTTCTACCTCCGG 59.533 44.000 0.00 0.00 0.00 5.14
2098 5657 7.467947 GCTTGCTTTCATTATCTTTCTACCTCC 60.468 40.741 0.00 0.00 0.00 4.30
2099 5658 7.413644 GCTTGCTTTCATTATCTTTCTACCTC 58.586 38.462 0.00 0.00 0.00 3.85
2100 5659 6.319911 GGCTTGCTTTCATTATCTTTCTACCT 59.680 38.462 0.00 0.00 0.00 3.08
2102 5661 6.969473 GTGGCTTGCTTTCATTATCTTTCTAC 59.031 38.462 0.00 0.00 0.00 2.59
2104 5663 5.713861 AGTGGCTTGCTTTCATTATCTTTCT 59.286 36.000 0.00 0.00 0.00 2.52
2106 5665 5.990120 AGTGGCTTGCTTTCATTATCTTT 57.010 34.783 0.00 0.00 0.00 2.52
2107 5666 5.067023 GCTAGTGGCTTGCTTTCATTATCTT 59.933 40.000 0.00 0.00 38.06 2.40
2108 5667 4.578105 GCTAGTGGCTTGCTTTCATTATCT 59.422 41.667 0.00 0.00 38.06 1.98
2109 5668 4.553547 CGCTAGTGGCTTGCTTTCATTATC 60.554 45.833 0.00 0.00 39.13 1.75
2110 5669 3.313526 CGCTAGTGGCTTGCTTTCATTAT 59.686 43.478 0.00 0.00 39.13 1.28
2111 5670 2.677836 CGCTAGTGGCTTGCTTTCATTA 59.322 45.455 0.00 0.00 39.13 1.90
2112 5671 1.470098 CGCTAGTGGCTTGCTTTCATT 59.530 47.619 0.00 0.00 39.13 2.57
2114 5673 1.577328 GCGCTAGTGGCTTGCTTTCA 61.577 55.000 0.00 0.00 39.13 2.69
2116 5675 2.335712 GGCGCTAGTGGCTTGCTTT 61.336 57.895 21.65 0.00 39.13 3.51
2117 5676 1.899437 TAGGCGCTAGTGGCTTGCTT 61.899 55.000 33.80 14.80 42.97 3.91
2118 5677 1.899437 TTAGGCGCTAGTGGCTTGCT 61.899 55.000 33.80 15.16 42.97 3.91
2119 5678 1.432270 CTTAGGCGCTAGTGGCTTGC 61.432 60.000 33.80 8.85 42.97 4.01
2121 5680 0.108138 CACTTAGGCGCTAGTGGCTT 60.108 55.000 33.80 16.33 42.97 4.35
2124 5683 1.521681 GGCACTTAGGCGCTAGTGG 60.522 63.158 26.81 15.56 33.33 4.00
2132 5691 0.523519 GTTCAAGCAGGCACTTAGGC 59.476 55.000 0.00 0.00 44.61 3.93
2133 5692 1.808945 CAGTTCAAGCAGGCACTTAGG 59.191 52.381 0.00 0.00 34.60 2.69
2134 5693 1.808945 CCAGTTCAAGCAGGCACTTAG 59.191 52.381 0.00 0.00 34.60 2.18
2135 5694 1.545428 CCCAGTTCAAGCAGGCACTTA 60.545 52.381 0.00 0.00 34.60 2.24
2136 5695 0.825010 CCCAGTTCAAGCAGGCACTT 60.825 55.000 0.00 0.00 34.60 3.16
2137 5696 1.228367 CCCAGTTCAAGCAGGCACT 60.228 57.895 0.00 0.00 43.88 4.40
2138 5697 2.270986 CCCCAGTTCAAGCAGGCAC 61.271 63.158 0.00 0.00 0.00 5.01
2139 5698 2.115910 CCCCAGTTCAAGCAGGCA 59.884 61.111 0.00 0.00 0.00 4.75
2140 5699 1.676967 CTCCCCAGTTCAAGCAGGC 60.677 63.158 0.00 0.00 0.00 4.85
2141 5700 0.622665 ATCTCCCCAGTTCAAGCAGG 59.377 55.000 0.00 0.00 0.00 4.85
2143 5702 0.329261 CCATCTCCCCAGTTCAAGCA 59.671 55.000 0.00 0.00 0.00 3.91
2144 5703 0.620556 TCCATCTCCCCAGTTCAAGC 59.379 55.000 0.00 0.00 0.00 4.01
2146 5705 2.342406 TCTCCATCTCCCCAGTTCAA 57.658 50.000 0.00 0.00 0.00 2.69
2147 5706 2.575921 ATCTCCATCTCCCCAGTTCA 57.424 50.000 0.00 0.00 0.00 3.18
2149 5708 2.334023 GCTATCTCCATCTCCCCAGTT 58.666 52.381 0.00 0.00 0.00 3.16
2150 5709 1.221523 TGCTATCTCCATCTCCCCAGT 59.778 52.381 0.00 0.00 0.00 4.00
2152 5711 1.505098 TCTGCTATCTCCATCTCCCCA 59.495 52.381 0.00 0.00 0.00 4.96
2154 5713 4.323409 GGAATTCTGCTATCTCCATCTCCC 60.323 50.000 5.23 0.00 0.00 4.30
2156 5715 5.245751 TCTGGAATTCTGCTATCTCCATCTC 59.754 44.000 5.23 0.00 35.67 2.75
2157 5716 5.153675 TCTGGAATTCTGCTATCTCCATCT 58.846 41.667 5.23 0.00 35.67 2.90
2160 5719 5.153675 AGATCTGGAATTCTGCTATCTCCA 58.846 41.667 5.23 0.00 34.97 3.86
2161 5720 5.743636 AGATCTGGAATTCTGCTATCTCC 57.256 43.478 5.23 0.00 0.00 3.71
2204 5763 2.037527 GGAGGAGGACAGGGACGT 59.962 66.667 0.00 0.00 0.00 4.34
2205 5764 0.033405 TAAGGAGGAGGACAGGGACG 60.033 60.000 0.00 0.00 0.00 4.79
2207 5766 1.288335 GACTAAGGAGGAGGACAGGGA 59.712 57.143 0.00 0.00 0.00 4.20
2208 5767 1.007238 TGACTAAGGAGGAGGACAGGG 59.993 57.143 0.00 0.00 0.00 4.45
2210 5769 6.553100 AGATTATTGACTAAGGAGGAGGACAG 59.447 42.308 0.00 0.00 0.00 3.51
2211 5770 6.444704 AGATTATTGACTAAGGAGGAGGACA 58.555 40.000 0.00 0.00 0.00 4.02
2212 5771 6.014925 GGAGATTATTGACTAAGGAGGAGGAC 60.015 46.154 0.00 0.00 0.00 3.85
2213 5772 6.078664 GGAGATTATTGACTAAGGAGGAGGA 58.921 44.000 0.00 0.00 0.00 3.71
2214 5773 5.841237 TGGAGATTATTGACTAAGGAGGAGG 59.159 44.000 0.00 0.00 0.00 4.30
2215 5774 6.553100 AGTGGAGATTATTGACTAAGGAGGAG 59.447 42.308 0.00 0.00 0.00 3.69
2216 5775 6.325028 CAGTGGAGATTATTGACTAAGGAGGA 59.675 42.308 0.00 0.00 0.00 3.71
2218 5777 5.988561 GCAGTGGAGATTATTGACTAAGGAG 59.011 44.000 0.00 0.00 0.00 3.69
2219 5778 5.663106 AGCAGTGGAGATTATTGACTAAGGA 59.337 40.000 0.00 0.00 0.00 3.36
2221 5780 5.236047 GCAGCAGTGGAGATTATTGACTAAG 59.764 44.000 0.00 0.00 0.00 2.18
2222 5781 5.118990 GCAGCAGTGGAGATTATTGACTAA 58.881 41.667 0.00 0.00 0.00 2.24
2223 5782 4.162131 TGCAGCAGTGGAGATTATTGACTA 59.838 41.667 0.00 0.00 0.00 2.59
2224 5783 3.054875 TGCAGCAGTGGAGATTATTGACT 60.055 43.478 0.00 0.00 0.00 3.41
2225 5784 3.273434 TGCAGCAGTGGAGATTATTGAC 58.727 45.455 0.00 0.00 0.00 3.18
2227 5786 2.617308 CCTGCAGCAGTGGAGATTATTG 59.383 50.000 21.26 0.00 44.77 1.90
2228 5787 2.507058 TCCTGCAGCAGTGGAGATTATT 59.493 45.455 21.26 0.00 44.77 1.40
2229 5788 2.121948 TCCTGCAGCAGTGGAGATTAT 58.878 47.619 21.26 0.00 44.77 1.28
2230 5789 1.571955 TCCTGCAGCAGTGGAGATTA 58.428 50.000 21.26 0.00 44.77 1.75
2231 5790 0.694771 TTCCTGCAGCAGTGGAGATT 59.305 50.000 21.26 0.00 44.77 2.40
2232 5791 0.917533 ATTCCTGCAGCAGTGGAGAT 59.082 50.000 21.26 7.00 44.77 2.75
2233 5792 1.571955 TATTCCTGCAGCAGTGGAGA 58.428 50.000 21.26 8.27 44.77 3.71
2234 5793 2.634815 ATATTCCTGCAGCAGTGGAG 57.365 50.000 21.26 5.86 41.71 3.86
2236 5795 3.198409 TGTATATTCCTGCAGCAGTGG 57.802 47.619 21.26 8.04 0.00 4.00
2237 5796 4.194640 ACTTGTATATTCCTGCAGCAGTG 58.805 43.478 21.26 12.48 0.00 3.66
2238 5797 4.163078 AGACTTGTATATTCCTGCAGCAGT 59.837 41.667 21.26 5.44 0.00 4.40
2240 5799 4.760530 AGACTTGTATATTCCTGCAGCA 57.239 40.909 8.66 0.00 0.00 4.41
2241 5800 7.553881 TTTAAGACTTGTATATTCCTGCAGC 57.446 36.000 8.66 0.00 0.00 5.25
2243 5802 9.273016 GCTATTTAAGACTTGTATATTCCTGCA 57.727 33.333 0.00 0.00 0.00 4.41
2244 5803 9.273016 TGCTATTTAAGACTTGTATATTCCTGC 57.727 33.333 0.00 0.00 0.00 4.85
2251 5810 9.830975 TGCTGATTGCTATTTAAGACTTGTATA 57.169 29.630 0.00 0.00 43.37 1.47
2252 5811 8.737168 TGCTGATTGCTATTTAAGACTTGTAT 57.263 30.769 0.00 0.00 43.37 2.29
2253 5812 7.280876 CCTGCTGATTGCTATTTAAGACTTGTA 59.719 37.037 0.00 0.00 43.37 2.41
2254 5813 6.094603 CCTGCTGATTGCTATTTAAGACTTGT 59.905 38.462 0.00 0.00 43.37 3.16
2255 5814 6.493116 CCTGCTGATTGCTATTTAAGACTTG 58.507 40.000 0.00 0.00 43.37 3.16
2256 5815 5.067023 GCCTGCTGATTGCTATTTAAGACTT 59.933 40.000 0.00 0.00 43.37 3.01
2257 5816 4.578105 GCCTGCTGATTGCTATTTAAGACT 59.422 41.667 0.00 0.00 43.37 3.24
2258 5817 4.578105 AGCCTGCTGATTGCTATTTAAGAC 59.422 41.667 0.00 0.00 43.37 3.01
2259 5818 4.785301 AGCCTGCTGATTGCTATTTAAGA 58.215 39.130 0.00 0.00 43.37 2.10
2260 5819 5.511234 AAGCCTGCTGATTGCTATTTAAG 57.489 39.130 0.00 0.00 43.37 1.85
2261 5820 5.009010 GCTAAGCCTGCTGATTGCTATTTAA 59.991 40.000 0.00 0.00 43.37 1.52
2262 5821 4.516698 GCTAAGCCTGCTGATTGCTATTTA 59.483 41.667 0.00 0.00 43.37 1.40
2263 5822 3.317430 GCTAAGCCTGCTGATTGCTATTT 59.683 43.478 0.00 0.00 43.37 1.40
2264 5823 2.883386 GCTAAGCCTGCTGATTGCTATT 59.117 45.455 0.00 0.00 43.37 1.73
2265 5824 2.158711 TGCTAAGCCTGCTGATTGCTAT 60.159 45.455 0.00 0.00 43.37 2.97
2266 5825 1.210234 TGCTAAGCCTGCTGATTGCTA 59.790 47.619 0.00 0.00 43.37 3.49
2267 5826 0.034767 TGCTAAGCCTGCTGATTGCT 60.035 50.000 0.00 0.00 43.37 3.91
2268 5827 0.381089 CTGCTAAGCCTGCTGATTGC 59.619 55.000 0.00 0.00 43.25 3.56
2269 5828 1.022735 CCTGCTAAGCCTGCTGATTG 58.977 55.000 0.00 0.00 0.00 2.67
2270 5829 0.106819 CCCTGCTAAGCCTGCTGATT 60.107 55.000 0.00 0.00 0.00 2.57
2271 5830 0.984961 TCCCTGCTAAGCCTGCTGAT 60.985 55.000 0.00 0.00 0.00 2.90
2272 5831 1.200760 TTCCCTGCTAAGCCTGCTGA 61.201 55.000 0.00 0.00 0.00 4.26
2273 5832 0.322816 TTTCCCTGCTAAGCCTGCTG 60.323 55.000 0.00 0.00 0.00 4.41
2274 5833 0.405585 TTTTCCCTGCTAAGCCTGCT 59.594 50.000 0.00 0.00 0.00 4.24
2275 5834 0.528017 GTTTTCCCTGCTAAGCCTGC 59.472 55.000 0.00 0.00 0.00 4.85
2276 5835 1.909700 TGTTTTCCCTGCTAAGCCTG 58.090 50.000 0.00 0.00 0.00 4.85
2277 5836 2.450476 CATGTTTTCCCTGCTAAGCCT 58.550 47.619 0.00 0.00 0.00 4.58
2278 5837 1.134995 GCATGTTTTCCCTGCTAAGCC 60.135 52.381 0.00 0.00 33.15 4.35
2279 5838 1.821136 AGCATGTTTTCCCTGCTAAGC 59.179 47.619 0.00 0.00 44.08 3.09
2280 5839 2.096496 CGAGCATGTTTTCCCTGCTAAG 59.904 50.000 0.00 0.00 45.79 2.18
2281 5840 2.083774 CGAGCATGTTTTCCCTGCTAA 58.916 47.619 0.00 0.00 45.79 3.09
2282 5841 1.277842 TCGAGCATGTTTTCCCTGCTA 59.722 47.619 0.00 0.00 45.79 3.49
2284 5843 1.098050 ATCGAGCATGTTTTCCCTGC 58.902 50.000 0.00 0.00 36.15 4.85
2285 5844 3.535561 ACTATCGAGCATGTTTTCCCTG 58.464 45.455 0.00 0.00 0.00 4.45
2286 5845 3.914426 ACTATCGAGCATGTTTTCCCT 57.086 42.857 0.00 0.00 0.00 4.20
2287 5846 6.619801 ATTTACTATCGAGCATGTTTTCCC 57.380 37.500 0.00 0.00 0.00 3.97
2292 5851 9.561069 AGGAATAAATTTACTATCGAGCATGTT 57.439 29.630 0.00 0.00 0.00 2.71
2293 5852 9.561069 AAGGAATAAATTTACTATCGAGCATGT 57.439 29.630 0.00 0.00 0.00 3.21
2294 5853 9.817365 CAAGGAATAAATTTACTATCGAGCATG 57.183 33.333 0.00 0.00 0.00 4.06
2295 5854 9.561069 ACAAGGAATAAATTTACTATCGAGCAT 57.439 29.630 0.00 0.00 0.00 3.79
2296 5855 8.958119 ACAAGGAATAAATTTACTATCGAGCA 57.042 30.769 0.00 0.00 0.00 4.26
2297 5856 8.215132 CGACAAGGAATAAATTTACTATCGAGC 58.785 37.037 0.00 0.00 0.00 5.03
2298 5857 9.245962 ACGACAAGGAATAAATTTACTATCGAG 57.754 33.333 18.12 5.46 0.00 4.04
2299 5858 9.241317 GACGACAAGGAATAAATTTACTATCGA 57.759 33.333 18.12 0.00 0.00 3.59
2300 5859 8.485591 GGACGACAAGGAATAAATTTACTATCG 58.514 37.037 0.00 8.96 0.00 2.92
2301 5860 9.321562 TGGACGACAAGGAATAAATTTACTATC 57.678 33.333 0.00 0.02 0.00 2.08
2302 5861 9.675464 TTGGACGACAAGGAATAAATTTACTAT 57.325 29.630 0.00 0.00 33.18 2.12
2303 5862 9.504708 TTTGGACGACAAGGAATAAATTTACTA 57.495 29.630 0.00 0.00 40.82 1.82
2304 5863 7.989416 TTGGACGACAAGGAATAAATTTACT 57.011 32.000 0.00 0.00 33.18 2.24
2305 5864 7.753580 CCTTTGGACGACAAGGAATAAATTTAC 59.246 37.037 0.00 0.00 40.82 2.01
2306 5865 7.094118 CCCTTTGGACGACAAGGAATAAATTTA 60.094 37.037 0.00 0.00 40.82 1.40
2307 5866 6.295067 CCCTTTGGACGACAAGGAATAAATTT 60.295 38.462 5.74 0.00 40.82 1.82
2308 5867 5.185056 CCCTTTGGACGACAAGGAATAAATT 59.815 40.000 5.74 0.00 40.82 1.82
2309 5868 4.705023 CCCTTTGGACGACAAGGAATAAAT 59.295 41.667 5.74 0.00 40.82 1.40
2310 5869 4.076394 CCCTTTGGACGACAAGGAATAAA 58.924 43.478 5.74 0.00 40.82 1.40
2311 5870 3.328343 TCCCTTTGGACGACAAGGAATAA 59.672 43.478 5.74 0.00 40.82 1.40
2312 5871 2.907696 TCCCTTTGGACGACAAGGAATA 59.092 45.455 5.74 0.00 40.82 1.75
2313 5872 1.702957 TCCCTTTGGACGACAAGGAAT 59.297 47.619 5.74 0.00 40.82 3.01
2314 5873 1.133363 TCCCTTTGGACGACAAGGAA 58.867 50.000 5.74 0.00 40.82 3.36
2315 5874 1.133363 TTCCCTTTGGACGACAAGGA 58.867 50.000 5.74 4.24 41.57 3.36
2316 5875 1.235724 GTTCCCTTTGGACGACAAGG 58.764 55.000 0.00 0.00 41.57 3.61
2317 5876 1.873591 CTGTTCCCTTTGGACGACAAG 59.126 52.381 0.00 0.00 41.57 3.16
2318 5877 1.961793 CTGTTCCCTTTGGACGACAA 58.038 50.000 0.00 0.00 41.57 3.18
2319 5878 0.534203 GCTGTTCCCTTTGGACGACA 60.534 55.000 0.00 0.00 41.57 4.35
2320 5879 2.244946 GCTGTTCCCTTTGGACGAC 58.755 57.895 0.00 0.00 41.57 4.34
2321 5880 4.792087 GCTGTTCCCTTTGGACGA 57.208 55.556 0.00 0.00 41.57 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.