Multiple sequence alignment - TraesCS3A01G002800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G002800 chr3A 100.000 2774 0 0 1 2774 1617142 1619915 0.000000e+00 5123.0
1 TraesCS3A01G002800 chr3A 84.587 545 59 8 918 1462 1648492 1649011 4.100000e-143 518.0
2 TraesCS3A01G002800 chr3A 81.053 95 17 1 532 626 1648402 1648495 1.070000e-09 75.0
3 TraesCS3A01G002800 chr3D 88.176 1700 127 41 777 2455 2453691 2452045 0.000000e+00 1958.0
4 TraesCS3A01G002800 chr3D 97.312 186 5 0 2589 2774 2451913 2451728 1.600000e-82 316.0
5 TraesCS3A01G002800 chr3D 88.136 59 7 0 2066 2124 587094405 587094463 1.380000e-08 71.3
6 TraesCS3A01G002800 chrUn 90.674 1351 79 14 758 2082 270457550 270456221 0.000000e+00 1753.0
7 TraesCS3A01G002800 chrUn 90.674 1351 79 14 758 2082 270465814 270464485 0.000000e+00 1753.0
8 TraesCS3A01G002800 chrUn 90.674 1351 79 14 758 2082 280686409 280685080 0.000000e+00 1753.0
9 TraesCS3A01G002800 chrUn 89.004 673 45 11 2123 2774 270456221 270455557 0.000000e+00 806.0
10 TraesCS3A01G002800 chrUn 89.004 673 45 11 2123 2774 270464485 270463821 0.000000e+00 806.0
11 TraesCS3A01G002800 chrUn 89.004 673 45 11 2123 2774 280685080 280684416 0.000000e+00 806.0
12 TraesCS3A01G002800 chr1D 86.614 381 48 3 1 379 258617494 258617873 4.270000e-113 418.0
13 TraesCS3A01G002800 chr1D 85.974 385 46 7 1 382 272343451 272343830 3.330000e-109 405.0
14 TraesCS3A01G002800 chr5D 85.974 385 48 5 1 382 220418444 220418825 9.250000e-110 407.0
15 TraesCS3A01G002800 chr5B 86.089 381 47 4 1 380 348268766 348268391 3.330000e-109 405.0
16 TraesCS3A01G002800 chr2D 85.678 391 49 4 3 387 383828796 383829185 3.330000e-109 405.0
17 TraesCS3A01G002800 chr2D 85.347 389 46 9 1 381 503464370 503464755 2.590000e-105 392.0
18 TraesCS3A01G002800 chr1A 85.455 385 52 2 1 381 346495813 346495429 5.570000e-107 398.0
19 TraesCS3A01G002800 chr6A 85.271 387 51 6 1 381 551790030 551789644 7.200000e-106 394.0
20 TraesCS3A01G002800 chr4D 85.271 387 50 6 1 381 323090446 323090831 2.590000e-105 392.0
21 TraesCS3A01G002800 chr3B 87.129 202 12 4 2586 2773 3262620 3262419 1.670000e-52 217.0
22 TraesCS3A01G002800 chr3B 89.412 85 8 1 2511 2594 3264726 3264642 3.780000e-19 106.0
23 TraesCS3A01G002800 chr1B 81.347 193 34 2 2268 2459 638956857 638957048 3.700000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G002800 chr3A 1617142 1619915 2773 False 5123.0 5123 100.000 1 2774 1 chr3A.!!$F1 2773
1 TraesCS3A01G002800 chr3A 1648402 1649011 609 False 296.5 518 82.820 532 1462 2 chr3A.!!$F2 930
2 TraesCS3A01G002800 chr3D 2451728 2453691 1963 True 1137.0 1958 92.744 777 2774 2 chr3D.!!$R1 1997
3 TraesCS3A01G002800 chrUn 270455557 270457550 1993 True 1279.5 1753 89.839 758 2774 2 chrUn.!!$R1 2016
4 TraesCS3A01G002800 chrUn 270463821 270465814 1993 True 1279.5 1753 89.839 758 2774 2 chrUn.!!$R2 2016
5 TraesCS3A01G002800 chrUn 280684416 280686409 1993 True 1279.5 1753 89.839 758 2774 2 chrUn.!!$R3 2016

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 216 0.031994 CAACCCCTTGTTTGCCTTCG 59.968 55.0 0.00 0.00 34.00 3.79 F
692 693 0.032540 AGAACGCTCGTACGGGTTTT 59.967 50.0 17.95 10.03 39.72 2.43 F
752 753 0.249447 GGCCTGTGCTTTTGGTGTTC 60.249 55.0 0.00 0.00 37.74 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1279 1301 0.108804 TTGAAGCCGACGATGAGGTC 60.109 55.0 0.00 0.00 0.00 3.85 R
1537 1567 0.324923 AGCCATGCATGAACCCACAT 60.325 50.0 28.31 0.74 0.00 3.21 R
2171 2212 0.400594 GGGCTGGGGTAAGCGATAAT 59.599 55.0 0.00 0.00 44.52 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.412853 AATTTATTTACCCACCGTATGCTTT 57.587 32.000 0.00 0.00 0.00 3.51
25 26 6.837471 TTTATTTACCCACCGTATGCTTTT 57.163 33.333 0.00 0.00 0.00 2.27
26 27 6.837471 TTATTTACCCACCGTATGCTTTTT 57.163 33.333 0.00 0.00 0.00 1.94
27 28 4.506886 TTTACCCACCGTATGCTTTTTG 57.493 40.909 0.00 0.00 0.00 2.44
28 29 1.989706 ACCCACCGTATGCTTTTTGT 58.010 45.000 0.00 0.00 0.00 2.83
29 30 2.312390 ACCCACCGTATGCTTTTTGTT 58.688 42.857 0.00 0.00 0.00 2.83
30 31 2.696187 ACCCACCGTATGCTTTTTGTTT 59.304 40.909 0.00 0.00 0.00 2.83
31 32 3.056304 CCCACCGTATGCTTTTTGTTTG 58.944 45.455 0.00 0.00 0.00 2.93
32 33 3.243569 CCCACCGTATGCTTTTTGTTTGA 60.244 43.478 0.00 0.00 0.00 2.69
33 34 4.363999 CCACCGTATGCTTTTTGTTTGAA 58.636 39.130 0.00 0.00 0.00 2.69
34 35 4.806247 CCACCGTATGCTTTTTGTTTGAAA 59.194 37.500 0.00 0.00 0.00 2.69
35 36 5.292101 CCACCGTATGCTTTTTGTTTGAAAA 59.708 36.000 0.00 0.00 0.00 2.29
36 37 6.183360 CCACCGTATGCTTTTTGTTTGAAAAA 60.183 34.615 0.00 0.00 0.00 1.94
37 38 6.899243 CACCGTATGCTTTTTGTTTGAAAAAG 59.101 34.615 13.04 13.04 45.29 2.27
38 39 6.814146 ACCGTATGCTTTTTGTTTGAAAAAGA 59.186 30.769 19.08 8.27 45.32 2.52
39 40 7.332182 ACCGTATGCTTTTTGTTTGAAAAAGAA 59.668 29.630 19.08 11.82 45.32 2.52
40 41 8.171840 CCGTATGCTTTTTGTTTGAAAAAGAAA 58.828 29.630 19.08 9.59 45.32 2.52
41 42 9.198065 CGTATGCTTTTTGTTTGAAAAAGAAAG 57.802 29.630 19.08 6.72 45.32 2.62
42 43 8.998989 GTATGCTTTTTGTTTGAAAAAGAAAGC 58.001 29.630 22.23 22.23 45.32 3.51
43 44 7.200778 TGCTTTTTGTTTGAAAAAGAAAGCT 57.799 28.000 26.38 0.00 45.32 3.74
44 45 7.297391 TGCTTTTTGTTTGAAAAAGAAAGCTC 58.703 30.769 26.38 8.76 45.32 4.09
45 46 7.173047 TGCTTTTTGTTTGAAAAAGAAAGCTCT 59.827 29.630 26.38 0.00 45.32 4.09
46 47 8.655970 GCTTTTTGTTTGAAAAAGAAAGCTCTA 58.344 29.630 21.91 0.00 45.32 2.43
48 49 9.705290 TTTTTGTTTGAAAAAGAAAGCTCTAGT 57.295 25.926 0.00 0.00 31.05 2.57
49 50 8.687824 TTTGTTTGAAAAAGAAAGCTCTAGTG 57.312 30.769 0.00 0.00 0.00 2.74
50 51 7.624360 TGTTTGAAAAAGAAAGCTCTAGTGA 57.376 32.000 0.00 0.00 0.00 3.41
51 52 8.050778 TGTTTGAAAAAGAAAGCTCTAGTGAA 57.949 30.769 0.00 0.00 0.00 3.18
52 53 8.519526 TGTTTGAAAAAGAAAGCTCTAGTGAAA 58.480 29.630 0.00 0.00 0.00 2.69
53 54 9.353999 GTTTGAAAAAGAAAGCTCTAGTGAAAA 57.646 29.630 0.00 0.00 0.00 2.29
60 61 7.326968 AGAAAGCTCTAGTGAAAATTATGGC 57.673 36.000 0.00 0.00 0.00 4.40
61 62 6.319911 AGAAAGCTCTAGTGAAAATTATGGCC 59.680 38.462 0.00 0.00 0.00 5.36
62 63 4.464947 AGCTCTAGTGAAAATTATGGCCC 58.535 43.478 0.00 0.00 0.00 5.80
63 64 3.570125 GCTCTAGTGAAAATTATGGCCCC 59.430 47.826 0.00 0.00 0.00 5.80
64 65 4.145052 CTCTAGTGAAAATTATGGCCCCC 58.855 47.826 0.00 0.00 0.00 5.40
65 66 1.775385 AGTGAAAATTATGGCCCCCG 58.225 50.000 0.00 0.00 0.00 5.73
66 67 0.750249 GTGAAAATTATGGCCCCCGG 59.250 55.000 0.00 0.00 0.00 5.73
67 68 0.336737 TGAAAATTATGGCCCCCGGT 59.663 50.000 0.00 0.00 0.00 5.28
68 69 1.273324 TGAAAATTATGGCCCCCGGTT 60.273 47.619 0.00 0.00 0.00 4.44
69 70 1.411246 GAAAATTATGGCCCCCGGTTC 59.589 52.381 0.00 0.00 0.00 3.62
70 71 0.634465 AAATTATGGCCCCCGGTTCT 59.366 50.000 0.00 0.00 0.00 3.01
71 72 1.525175 AATTATGGCCCCCGGTTCTA 58.475 50.000 0.00 0.00 0.00 2.10
72 73 0.769247 ATTATGGCCCCCGGTTCTAC 59.231 55.000 0.00 0.00 0.00 2.59
73 74 1.347243 TTATGGCCCCCGGTTCTACC 61.347 60.000 0.00 0.00 34.05 3.18
74 75 2.260316 TATGGCCCCCGGTTCTACCT 62.260 60.000 0.00 0.00 35.66 3.08
75 76 3.013327 GGCCCCCGGTTCTACCTT 61.013 66.667 0.00 0.00 35.66 3.50
76 77 2.609534 GGCCCCCGGTTCTACCTTT 61.610 63.158 0.00 0.00 35.66 3.11
77 78 1.273986 GGCCCCCGGTTCTACCTTTA 61.274 60.000 0.00 0.00 35.66 1.85
78 79 0.841961 GCCCCCGGTTCTACCTTTAT 59.158 55.000 0.00 0.00 35.66 1.40
79 80 2.049372 GCCCCCGGTTCTACCTTTATA 58.951 52.381 0.00 0.00 35.66 0.98
80 81 2.439135 GCCCCCGGTTCTACCTTTATAA 59.561 50.000 0.00 0.00 35.66 0.98
81 82 3.073503 GCCCCCGGTTCTACCTTTATAAT 59.926 47.826 0.00 0.00 35.66 1.28
82 83 4.286808 GCCCCCGGTTCTACCTTTATAATA 59.713 45.833 0.00 0.00 35.66 0.98
83 84 5.045359 GCCCCCGGTTCTACCTTTATAATAT 60.045 44.000 0.00 0.00 35.66 1.28
84 85 6.156775 GCCCCCGGTTCTACCTTTATAATATA 59.843 42.308 0.00 0.00 35.66 0.86
85 86 7.147426 GCCCCCGGTTCTACCTTTATAATATAT 60.147 40.741 0.00 0.00 35.66 0.86
86 87 8.775151 CCCCCGGTTCTACCTTTATAATATATT 58.225 37.037 0.00 2.97 35.66 1.28
123 124 9.646427 AATACATTGTTGCAATTTATTTACCGT 57.354 25.926 0.59 0.00 0.00 4.83
124 125 7.954788 ACATTGTTGCAATTTATTTACCGTT 57.045 28.000 0.59 0.00 0.00 4.44
126 127 9.646427 ACATTGTTGCAATTTATTTACCGTTAT 57.354 25.926 0.59 0.00 0.00 1.89
183 184 8.208718 TGAGATTTGATCCTTACAATTAACCG 57.791 34.615 0.00 0.00 0.00 4.44
184 185 7.827236 TGAGATTTGATCCTTACAATTAACCGT 59.173 33.333 0.00 0.00 0.00 4.83
185 186 8.209917 AGATTTGATCCTTACAATTAACCGTC 57.790 34.615 0.00 0.00 0.00 4.79
186 187 7.827236 AGATTTGATCCTTACAATTAACCGTCA 59.173 33.333 0.00 0.00 0.00 4.35
187 188 7.747155 TTTGATCCTTACAATTAACCGTCAA 57.253 32.000 0.00 0.00 0.00 3.18
188 189 6.978343 TGATCCTTACAATTAACCGTCAAG 57.022 37.500 0.00 0.00 0.00 3.02
190 191 4.581868 TCCTTACAATTAACCGTCAAGGG 58.418 43.478 0.00 0.00 46.96 3.95
191 192 4.286549 TCCTTACAATTAACCGTCAAGGGA 59.713 41.667 0.00 0.00 46.96 4.20
192 193 5.045432 TCCTTACAATTAACCGTCAAGGGAT 60.045 40.000 0.00 0.00 46.96 3.85
193 194 5.650703 CCTTACAATTAACCGTCAAGGGATT 59.349 40.000 0.00 0.00 46.96 3.01
194 195 6.404293 CCTTACAATTAACCGTCAAGGGATTG 60.404 42.308 0.00 0.00 46.96 2.67
195 196 4.658063 ACAATTAACCGTCAAGGGATTGA 58.342 39.130 8.77 0.00 46.96 2.57
196 197 4.457949 ACAATTAACCGTCAAGGGATTGAC 59.542 41.667 10.38 10.38 46.96 3.18
206 207 3.765968 GGGATTGACAACCCCTTGT 57.234 52.632 10.82 0.00 43.71 3.16
207 208 2.009681 GGGATTGACAACCCCTTGTT 57.990 50.000 10.82 0.00 40.93 2.83
208 209 2.325484 GGGATTGACAACCCCTTGTTT 58.675 47.619 10.82 0.00 40.93 2.83
209 210 2.037121 GGGATTGACAACCCCTTGTTTG 59.963 50.000 10.82 0.00 40.93 2.93
210 211 2.547855 GGATTGACAACCCCTTGTTTGC 60.548 50.000 0.00 0.00 40.93 3.68
211 212 0.827368 TTGACAACCCCTTGTTTGCC 59.173 50.000 0.00 0.00 40.93 4.52
212 213 0.032615 TGACAACCCCTTGTTTGCCT 60.033 50.000 0.00 0.00 40.93 4.75
213 214 1.119684 GACAACCCCTTGTTTGCCTT 58.880 50.000 0.00 0.00 40.93 4.35
214 215 1.068588 GACAACCCCTTGTTTGCCTTC 59.931 52.381 0.00 0.00 40.93 3.46
215 216 0.031994 CAACCCCTTGTTTGCCTTCG 59.968 55.000 0.00 0.00 34.00 3.79
216 217 0.106419 AACCCCTTGTTTGCCTTCGA 60.106 50.000 0.00 0.00 31.47 3.71
217 218 0.112412 ACCCCTTGTTTGCCTTCGAT 59.888 50.000 0.00 0.00 0.00 3.59
218 219 0.527565 CCCCTTGTTTGCCTTCGATG 59.472 55.000 0.00 0.00 0.00 3.84
219 220 0.109132 CCCTTGTTTGCCTTCGATGC 60.109 55.000 0.75 0.75 0.00 3.91
220 221 0.597568 CCTTGTTTGCCTTCGATGCA 59.402 50.000 6.08 6.08 36.84 3.96
221 222 1.000385 CCTTGTTTGCCTTCGATGCAA 60.000 47.619 16.28 16.28 46.30 4.08
230 231 6.449635 TTGCCTTCGATGCAAGTATTTATT 57.550 33.333 16.28 0.00 43.36 1.40
231 232 7.561021 TTGCCTTCGATGCAAGTATTTATTA 57.439 32.000 16.28 0.00 43.36 0.98
232 233 7.744087 TGCCTTCGATGCAAGTATTTATTAT 57.256 32.000 7.60 0.00 35.40 1.28
233 234 8.165239 TGCCTTCGATGCAAGTATTTATTATT 57.835 30.769 7.60 0.00 35.40 1.40
234 235 8.629158 TGCCTTCGATGCAAGTATTTATTATTT 58.371 29.630 7.60 0.00 35.40 1.40
235 236 9.118236 GCCTTCGATGCAAGTATTTATTATTTC 57.882 33.333 0.00 0.00 0.00 2.17
236 237 9.318041 CCTTCGATGCAAGTATTTATTATTTCG 57.682 33.333 0.00 0.00 0.00 3.46
237 238 9.864034 CTTCGATGCAAGTATTTATTATTTCGT 57.136 29.630 0.00 0.00 0.00 3.85
238 239 9.644993 TTCGATGCAAGTATTTATTATTTCGTG 57.355 29.630 0.00 0.00 0.00 4.35
239 240 8.822855 TCGATGCAAGTATTTATTATTTCGTGT 58.177 29.630 0.00 0.00 0.00 4.49
240 241 8.882199 CGATGCAAGTATTTATTATTTCGTGTG 58.118 33.333 0.00 0.00 0.00 3.82
241 242 9.716507 GATGCAAGTATTTATTATTTCGTGTGT 57.283 29.630 0.00 0.00 0.00 3.72
253 254 7.716768 TTATTTCGTGTGTATGTGTTCTTCA 57.283 32.000 0.00 0.00 0.00 3.02
254 255 5.398176 TTTCGTGTGTATGTGTTCTTCAC 57.602 39.130 0.00 0.00 46.31 3.18
264 265 3.340337 GTGTTCTTCACAAGGTCTTGC 57.660 47.619 10.31 0.00 45.51 4.01
265 266 1.939934 TGTTCTTCACAAGGTCTTGCG 59.060 47.619 10.31 1.80 44.03 4.85
266 267 2.210116 GTTCTTCACAAGGTCTTGCGA 58.790 47.619 10.31 4.18 44.03 5.10
267 268 2.154854 TCTTCACAAGGTCTTGCGAG 57.845 50.000 10.31 0.00 44.03 5.03
268 269 1.151668 CTTCACAAGGTCTTGCGAGG 58.848 55.000 10.31 3.93 44.03 4.63
269 270 0.468226 TTCACAAGGTCTTGCGAGGT 59.532 50.000 10.31 0.00 44.03 3.85
270 271 0.468226 TCACAAGGTCTTGCGAGGTT 59.532 50.000 10.31 0.00 44.03 3.50
271 272 0.868406 CACAAGGTCTTGCGAGGTTC 59.132 55.000 10.31 0.00 44.03 3.62
272 273 0.250338 ACAAGGTCTTGCGAGGTTCC 60.250 55.000 10.31 2.14 44.03 3.62
273 274 0.250295 CAAGGTCTTGCGAGGTTCCA 60.250 55.000 0.00 0.00 33.45 3.53
274 275 0.250338 AAGGTCTTGCGAGGTTCCAC 60.250 55.000 0.00 0.00 0.00 4.02
275 276 1.122019 AGGTCTTGCGAGGTTCCACT 61.122 55.000 0.00 0.00 0.00 4.00
276 277 0.606604 GGTCTTGCGAGGTTCCACTA 59.393 55.000 0.00 0.00 0.00 2.74
277 278 1.672145 GGTCTTGCGAGGTTCCACTAC 60.672 57.143 0.00 0.00 0.00 2.73
278 279 1.272769 GTCTTGCGAGGTTCCACTACT 59.727 52.381 0.00 0.00 0.00 2.57
279 280 1.272490 TCTTGCGAGGTTCCACTACTG 59.728 52.381 0.00 0.00 0.00 2.74
280 281 0.320374 TTGCGAGGTTCCACTACTGG 59.680 55.000 0.00 0.00 39.23 4.00
281 282 0.541063 TGCGAGGTTCCACTACTGGA 60.541 55.000 0.00 0.00 45.68 3.86
282 283 0.824759 GCGAGGTTCCACTACTGGAT 59.175 55.000 0.00 0.00 46.64 3.41
283 284 1.207329 GCGAGGTTCCACTACTGGATT 59.793 52.381 0.00 0.00 46.64 3.01
284 285 2.893637 CGAGGTTCCACTACTGGATTG 58.106 52.381 0.00 0.00 46.64 2.67
285 286 2.496070 CGAGGTTCCACTACTGGATTGA 59.504 50.000 0.00 0.00 46.64 2.57
286 287 3.133003 CGAGGTTCCACTACTGGATTGAT 59.867 47.826 0.00 0.00 46.64 2.57
287 288 4.341235 CGAGGTTCCACTACTGGATTGATA 59.659 45.833 0.00 0.00 46.64 2.15
288 289 5.163447 CGAGGTTCCACTACTGGATTGATAA 60.163 44.000 0.00 0.00 46.64 1.75
289 290 6.240549 AGGTTCCACTACTGGATTGATAAG 57.759 41.667 0.00 0.00 46.64 1.73
290 291 4.816925 GGTTCCACTACTGGATTGATAAGC 59.183 45.833 0.00 0.00 46.64 3.09
291 292 5.396884 GGTTCCACTACTGGATTGATAAGCT 60.397 44.000 0.00 0.00 46.64 3.74
292 293 5.957771 TCCACTACTGGATTGATAAGCTT 57.042 39.130 3.48 3.48 42.15 3.74
293 294 5.674525 TCCACTACTGGATTGATAAGCTTG 58.325 41.667 9.86 0.00 42.15 4.01
294 295 4.818546 CCACTACTGGATTGATAAGCTTGG 59.181 45.833 9.86 0.00 40.55 3.61
295 296 5.431765 CACTACTGGATTGATAAGCTTGGT 58.568 41.667 9.86 0.00 0.00 3.67
296 297 5.882557 CACTACTGGATTGATAAGCTTGGTT 59.117 40.000 9.86 0.00 0.00 3.67
297 298 6.037610 CACTACTGGATTGATAAGCTTGGTTC 59.962 42.308 9.86 4.12 0.00 3.62
298 299 5.184892 ACTGGATTGATAAGCTTGGTTCT 57.815 39.130 9.86 0.00 0.00 3.01
299 300 5.574188 ACTGGATTGATAAGCTTGGTTCTT 58.426 37.500 9.86 0.00 0.00 2.52
300 301 6.721318 ACTGGATTGATAAGCTTGGTTCTTA 58.279 36.000 9.86 0.00 0.00 2.10
301 302 7.175104 ACTGGATTGATAAGCTTGGTTCTTAA 58.825 34.615 9.86 0.00 30.76 1.85
302 303 7.121315 ACTGGATTGATAAGCTTGGTTCTTAAC 59.879 37.037 9.86 0.00 30.76 2.01
303 304 7.175104 TGGATTGATAAGCTTGGTTCTTAACT 58.825 34.615 9.86 0.00 30.76 2.24
304 305 7.121168 TGGATTGATAAGCTTGGTTCTTAACTG 59.879 37.037 9.86 0.00 30.76 3.16
305 306 7.336931 GGATTGATAAGCTTGGTTCTTAACTGA 59.663 37.037 9.86 0.00 30.76 3.41
306 307 7.672983 TTGATAAGCTTGGTTCTTAACTGAG 57.327 36.000 9.86 0.00 30.76 3.35
307 308 6.173339 TGATAAGCTTGGTTCTTAACTGAGG 58.827 40.000 9.86 0.00 30.76 3.86
308 309 3.425162 AGCTTGGTTCTTAACTGAGGG 57.575 47.619 0.00 0.00 0.00 4.30
309 310 2.979678 AGCTTGGTTCTTAACTGAGGGA 59.020 45.455 0.00 0.00 0.00 4.20
310 311 3.394606 AGCTTGGTTCTTAACTGAGGGAA 59.605 43.478 0.00 0.00 0.00 3.97
311 312 4.141251 AGCTTGGTTCTTAACTGAGGGAAA 60.141 41.667 0.00 0.00 0.00 3.13
312 313 4.767409 GCTTGGTTCTTAACTGAGGGAAAT 59.233 41.667 0.00 0.00 0.00 2.17
313 314 5.944007 GCTTGGTTCTTAACTGAGGGAAATA 59.056 40.000 0.00 0.00 0.00 1.40
314 315 6.127980 GCTTGGTTCTTAACTGAGGGAAATAC 60.128 42.308 0.00 0.00 0.00 1.89
315 316 6.697641 TGGTTCTTAACTGAGGGAAATACT 57.302 37.500 0.00 0.00 0.00 2.12
316 317 7.086685 TGGTTCTTAACTGAGGGAAATACTT 57.913 36.000 0.00 0.00 0.00 2.24
317 318 8.209802 TGGTTCTTAACTGAGGGAAATACTTA 57.790 34.615 0.00 0.00 0.00 2.24
318 319 8.832735 TGGTTCTTAACTGAGGGAAATACTTAT 58.167 33.333 0.00 0.00 0.00 1.73
319 320 9.327628 GGTTCTTAACTGAGGGAAATACTTATC 57.672 37.037 0.00 0.00 0.00 1.75
322 323 9.716556 TCTTAACTGAGGGAAATACTTATCTCT 57.283 33.333 0.00 0.00 0.00 3.10
326 327 8.472007 ACTGAGGGAAATACTTATCTCTACTG 57.528 38.462 0.00 0.00 0.00 2.74
327 328 8.062536 ACTGAGGGAAATACTTATCTCTACTGT 58.937 37.037 0.00 0.00 0.00 3.55
328 329 9.575868 CTGAGGGAAATACTTATCTCTACTGTA 57.424 37.037 0.00 0.00 0.00 2.74
329 330 9.352191 TGAGGGAAATACTTATCTCTACTGTAC 57.648 37.037 0.00 0.00 0.00 2.90
330 331 9.577222 GAGGGAAATACTTATCTCTACTGTACT 57.423 37.037 0.00 0.00 0.00 2.73
331 332 9.357161 AGGGAAATACTTATCTCTACTGTACTG 57.643 37.037 0.00 0.00 0.00 2.74
332 333 8.083462 GGGAAATACTTATCTCTACTGTACTGC 58.917 40.741 0.00 0.00 0.00 4.40
333 334 8.630917 GGAAATACTTATCTCTACTGTACTGCA 58.369 37.037 0.00 0.00 0.00 4.41
336 337 8.926092 ATACTTATCTCTACTGTACTGCATCA 57.074 34.615 0.00 0.00 0.00 3.07
337 338 7.831691 ACTTATCTCTACTGTACTGCATCAT 57.168 36.000 0.00 0.00 0.00 2.45
338 339 8.243961 ACTTATCTCTACTGTACTGCATCATT 57.756 34.615 0.00 0.00 0.00 2.57
339 340 8.700051 ACTTATCTCTACTGTACTGCATCATTT 58.300 33.333 0.00 0.00 0.00 2.32
340 341 9.539825 CTTATCTCTACTGTACTGCATCATTTT 57.460 33.333 0.00 0.00 0.00 1.82
341 342 9.534565 TTATCTCTACTGTACTGCATCATTTTC 57.465 33.333 0.00 0.00 0.00 2.29
342 343 7.175347 TCTCTACTGTACTGCATCATTTTCT 57.825 36.000 0.00 0.00 0.00 2.52
343 344 7.261325 TCTCTACTGTACTGCATCATTTTCTC 58.739 38.462 0.00 0.00 0.00 2.87
344 345 7.123397 TCTCTACTGTACTGCATCATTTTCTCT 59.877 37.037 0.00 0.00 0.00 3.10
345 346 7.615403 TCTACTGTACTGCATCATTTTCTCTT 58.385 34.615 0.00 0.00 0.00 2.85
346 347 8.097038 TCTACTGTACTGCATCATTTTCTCTTT 58.903 33.333 0.00 0.00 0.00 2.52
347 348 7.516198 ACTGTACTGCATCATTTTCTCTTTT 57.484 32.000 0.00 0.00 0.00 2.27
348 349 7.588512 ACTGTACTGCATCATTTTCTCTTTTC 58.411 34.615 0.00 0.00 0.00 2.29
349 350 6.913170 TGTACTGCATCATTTTCTCTTTTCC 58.087 36.000 0.00 0.00 0.00 3.13
350 351 5.051891 ACTGCATCATTTTCTCTTTTCCG 57.948 39.130 0.00 0.00 0.00 4.30
351 352 4.761739 ACTGCATCATTTTCTCTTTTCCGA 59.238 37.500 0.00 0.00 0.00 4.55
352 353 5.241506 ACTGCATCATTTTCTCTTTTCCGAA 59.758 36.000 0.00 0.00 0.00 4.30
353 354 5.702865 TGCATCATTTTCTCTTTTCCGAAG 58.297 37.500 0.00 0.00 0.00 3.79
354 355 5.473162 TGCATCATTTTCTCTTTTCCGAAGA 59.527 36.000 0.00 0.00 0.00 2.87
355 356 6.016360 TGCATCATTTTCTCTTTTCCGAAGAA 60.016 34.615 0.00 0.00 0.00 2.52
356 357 6.863126 GCATCATTTTCTCTTTTCCGAAGAAA 59.137 34.615 0.00 0.00 40.26 2.52
357 358 7.543520 GCATCATTTTCTCTTTTCCGAAGAAAT 59.456 33.333 0.00 0.00 41.55 2.17
358 359 9.415544 CATCATTTTCTCTTTTCCGAAGAAATT 57.584 29.630 0.00 0.00 41.55 1.82
359 360 9.631452 ATCATTTTCTCTTTTCCGAAGAAATTC 57.369 29.630 0.00 0.00 41.55 2.17
360 361 8.082242 TCATTTTCTCTTTTCCGAAGAAATTCC 58.918 33.333 0.00 0.00 41.55 3.01
361 362 6.952773 TTTCTCTTTTCCGAAGAAATTCCA 57.047 33.333 0.00 0.00 41.55 3.53
362 363 6.952773 TTCTCTTTTCCGAAGAAATTCCAA 57.047 33.333 0.00 0.00 41.55 3.53
363 364 6.313744 TCTCTTTTCCGAAGAAATTCCAAC 57.686 37.500 0.00 0.00 41.55 3.77
364 365 5.049680 TCTCTTTTCCGAAGAAATTCCAACG 60.050 40.000 0.00 0.00 41.55 4.10
365 366 4.577283 TCTTTTCCGAAGAAATTCCAACGT 59.423 37.500 0.00 0.00 41.55 3.99
366 367 5.759273 TCTTTTCCGAAGAAATTCCAACGTA 59.241 36.000 0.00 0.00 41.55 3.57
367 368 6.260493 TCTTTTCCGAAGAAATTCCAACGTAA 59.740 34.615 0.00 0.00 41.55 3.18
368 369 4.996062 TCCGAAGAAATTCCAACGTAAC 57.004 40.909 0.00 0.00 0.00 2.50
369 370 4.634199 TCCGAAGAAATTCCAACGTAACT 58.366 39.130 0.00 0.00 0.00 2.24
370 371 4.687483 TCCGAAGAAATTCCAACGTAACTC 59.313 41.667 0.00 0.00 0.00 3.01
371 372 4.449743 CCGAAGAAATTCCAACGTAACTCA 59.550 41.667 0.00 0.00 0.00 3.41
372 373 5.121768 CCGAAGAAATTCCAACGTAACTCAT 59.878 40.000 0.00 0.00 0.00 2.90
373 374 6.311935 CCGAAGAAATTCCAACGTAACTCATA 59.688 38.462 0.00 0.00 0.00 2.15
374 375 7.148540 CCGAAGAAATTCCAACGTAACTCATAA 60.149 37.037 0.00 0.00 0.00 1.90
375 376 7.898309 CGAAGAAATTCCAACGTAACTCATAAG 59.102 37.037 0.00 0.00 0.00 1.73
376 377 8.617290 AAGAAATTCCAACGTAACTCATAAGT 57.383 30.769 0.00 0.00 37.32 2.24
377 378 9.715121 AAGAAATTCCAACGTAACTCATAAGTA 57.285 29.630 0.00 0.00 33.48 2.24
378 379 9.367444 AGAAATTCCAACGTAACTCATAAGTAG 57.633 33.333 0.00 0.00 33.48 2.57
379 380 7.535489 AATTCCAACGTAACTCATAAGTAGC 57.465 36.000 0.00 0.00 33.48 3.58
380 381 5.648178 TCCAACGTAACTCATAAGTAGCA 57.352 39.130 0.00 0.00 33.48 3.49
381 382 5.404946 TCCAACGTAACTCATAAGTAGCAC 58.595 41.667 0.00 0.00 33.48 4.40
382 383 4.565564 CCAACGTAACTCATAAGTAGCACC 59.434 45.833 0.00 0.00 33.48 5.01
383 384 4.025015 ACGTAACTCATAAGTAGCACCG 57.975 45.455 0.00 0.00 33.48 4.94
384 385 2.787680 CGTAACTCATAAGTAGCACCGC 59.212 50.000 0.00 0.00 33.48 5.68
385 386 2.311124 AACTCATAAGTAGCACCGCC 57.689 50.000 0.00 0.00 33.48 6.13
386 387 0.464452 ACTCATAAGTAGCACCGCCC 59.536 55.000 0.00 0.00 32.59 6.13
387 388 0.249911 CTCATAAGTAGCACCGCCCC 60.250 60.000 0.00 0.00 0.00 5.80
388 389 1.594293 CATAAGTAGCACCGCCCCG 60.594 63.158 0.00 0.00 0.00 5.73
401 402 3.727258 CCCCGGCATCCAAGACCA 61.727 66.667 0.00 0.00 0.00 4.02
402 403 2.438434 CCCGGCATCCAAGACCAC 60.438 66.667 0.00 0.00 0.00 4.16
403 404 2.438434 CCGGCATCCAAGACCACC 60.438 66.667 0.00 0.00 0.00 4.61
404 405 2.438434 CGGCATCCAAGACCACCC 60.438 66.667 0.00 0.00 0.00 4.61
405 406 2.043953 GGCATCCAAGACCACCCC 60.044 66.667 0.00 0.00 0.00 4.95
406 407 2.616458 GGCATCCAAGACCACCCCT 61.616 63.158 0.00 0.00 0.00 4.79
407 408 1.077429 GCATCCAAGACCACCCCTC 60.077 63.158 0.00 0.00 0.00 4.30
408 409 1.609783 CATCCAAGACCACCCCTCC 59.390 63.158 0.00 0.00 0.00 4.30
409 410 1.163309 ATCCAAGACCACCCCTCCA 59.837 57.895 0.00 0.00 0.00 3.86
410 411 0.477597 ATCCAAGACCACCCCTCCAA 60.478 55.000 0.00 0.00 0.00 3.53
411 412 1.074951 CCAAGACCACCCCTCCAAC 59.925 63.158 0.00 0.00 0.00 3.77
412 413 1.715019 CCAAGACCACCCCTCCAACA 61.715 60.000 0.00 0.00 0.00 3.33
413 414 0.537371 CAAGACCACCCCTCCAACAC 60.537 60.000 0.00 0.00 0.00 3.32
414 415 1.716028 AAGACCACCCCTCCAACACC 61.716 60.000 0.00 0.00 0.00 4.16
415 416 2.369015 ACCACCCCTCCAACACCA 60.369 61.111 0.00 0.00 0.00 4.17
416 417 2.115266 CCACCCCTCCAACACCAC 59.885 66.667 0.00 0.00 0.00 4.16
417 418 2.115266 CACCCCTCCAACACCACC 59.885 66.667 0.00 0.00 0.00 4.61
418 419 2.369015 ACCCCTCCAACACCACCA 60.369 61.111 0.00 0.00 0.00 4.17
419 420 2.115266 CCCCTCCAACACCACCAC 59.885 66.667 0.00 0.00 0.00 4.16
420 421 2.281484 CCCTCCAACACCACCACG 60.281 66.667 0.00 0.00 0.00 4.94
421 422 2.281484 CCTCCAACACCACCACGG 60.281 66.667 0.00 0.00 42.50 4.94
422 423 2.813726 CCTCCAACACCACCACGGA 61.814 63.158 0.00 0.00 38.63 4.69
423 424 1.147376 CTCCAACACCACCACGGAA 59.853 57.895 0.00 0.00 38.63 4.30
424 425 0.884704 CTCCAACACCACCACGGAAG 60.885 60.000 0.00 0.00 38.63 3.46
425 426 1.147376 CCAACACCACCACGGAAGA 59.853 57.895 0.00 0.00 38.63 2.87
426 427 0.884704 CCAACACCACCACGGAAGAG 60.885 60.000 0.00 0.00 38.63 2.85
427 428 0.105964 CAACACCACCACGGAAGAGA 59.894 55.000 0.00 0.00 38.63 3.10
428 429 0.834612 AACACCACCACGGAAGAGAA 59.165 50.000 0.00 0.00 38.63 2.87
429 430 0.393077 ACACCACCACGGAAGAGAAG 59.607 55.000 0.00 0.00 38.63 2.85
430 431 0.679505 CACCACCACGGAAGAGAAGA 59.320 55.000 0.00 0.00 38.63 2.87
431 432 0.969894 ACCACCACGGAAGAGAAGAG 59.030 55.000 0.00 0.00 38.63 2.85
432 433 1.257743 CCACCACGGAAGAGAAGAGA 58.742 55.000 0.00 0.00 36.56 3.10
433 434 1.618837 CCACCACGGAAGAGAAGAGAA 59.381 52.381 0.00 0.00 36.56 2.87
434 435 2.610727 CCACCACGGAAGAGAAGAGAAC 60.611 54.545 0.00 0.00 36.56 3.01
435 436 1.619332 ACCACGGAAGAGAAGAGAACC 59.381 52.381 0.00 0.00 0.00 3.62
436 437 1.618837 CCACGGAAGAGAAGAGAACCA 59.381 52.381 0.00 0.00 0.00 3.67
437 438 2.610727 CCACGGAAGAGAAGAGAACCAC 60.611 54.545 0.00 0.00 0.00 4.16
438 439 1.619332 ACGGAAGAGAAGAGAACCACC 59.381 52.381 0.00 0.00 0.00 4.61
439 440 1.402984 CGGAAGAGAAGAGAACCACCG 60.403 57.143 0.00 0.00 0.00 4.94
440 441 1.066787 GGAAGAGAAGAGAACCACCGG 60.067 57.143 0.00 0.00 0.00 5.28
441 442 1.619332 GAAGAGAAGAGAACCACCGGT 59.381 52.381 0.00 0.00 37.65 5.28
442 443 0.969894 AGAGAAGAGAACCACCGGTG 59.030 55.000 28.26 28.26 35.34 4.94
443 444 0.966920 GAGAAGAGAACCACCGGTGA 59.033 55.000 36.07 0.00 35.34 4.02
444 445 1.343465 GAGAAGAGAACCACCGGTGAA 59.657 52.381 36.07 0.00 35.34 3.18
445 446 1.344763 AGAAGAGAACCACCGGTGAAG 59.655 52.381 36.07 21.99 35.34 3.02
446 447 1.343465 GAAGAGAACCACCGGTGAAGA 59.657 52.381 36.07 0.00 35.34 2.87
447 448 0.969894 AGAGAACCACCGGTGAAGAG 59.030 55.000 36.07 20.85 35.34 2.85
448 449 0.680061 GAGAACCACCGGTGAAGAGT 59.320 55.000 36.07 21.56 35.34 3.24
449 450 1.891150 GAGAACCACCGGTGAAGAGTA 59.109 52.381 36.07 0.00 35.34 2.59
450 451 1.893801 AGAACCACCGGTGAAGAGTAG 59.106 52.381 36.07 18.96 35.34 2.57
451 452 1.891150 GAACCACCGGTGAAGAGTAGA 59.109 52.381 36.07 0.00 35.34 2.59
452 453 2.005370 ACCACCGGTGAAGAGTAGAA 57.995 50.000 36.07 0.00 32.98 2.10
453 454 1.893801 ACCACCGGTGAAGAGTAGAAG 59.106 52.381 36.07 16.71 32.98 2.85
454 455 1.204941 CCACCGGTGAAGAGTAGAAGG 59.795 57.143 36.07 10.65 0.00 3.46
455 456 0.896226 ACCGGTGAAGAGTAGAAGGC 59.104 55.000 6.12 0.00 0.00 4.35
456 457 0.175989 CCGGTGAAGAGTAGAAGGCC 59.824 60.000 0.00 0.00 0.00 5.19
457 458 0.179134 CGGTGAAGAGTAGAAGGCCG 60.179 60.000 0.00 0.00 0.00 6.13
458 459 0.460459 GGTGAAGAGTAGAAGGCCGC 60.460 60.000 0.00 0.00 0.00 6.53
459 460 0.533032 GTGAAGAGTAGAAGGCCGCT 59.467 55.000 0.00 0.93 0.00 5.52
460 461 0.818296 TGAAGAGTAGAAGGCCGCTC 59.182 55.000 4.34 2.01 0.00 5.03
461 462 0.103390 GAAGAGTAGAAGGCCGCTCC 59.897 60.000 4.34 0.00 0.00 4.70
469 470 2.764547 AGGCCGCTCCTTCCTACC 60.765 66.667 0.00 0.00 44.75 3.18
470 471 3.862991 GGCCGCTCCTTCCTACCC 61.863 72.222 0.00 0.00 0.00 3.69
471 472 3.081409 GCCGCTCCTTCCTACCCA 61.081 66.667 0.00 0.00 0.00 4.51
472 473 2.666098 GCCGCTCCTTCCTACCCAA 61.666 63.158 0.00 0.00 0.00 4.12
473 474 1.988015 CCGCTCCTTCCTACCCAAA 59.012 57.895 0.00 0.00 0.00 3.28
474 475 0.326927 CCGCTCCTTCCTACCCAAAA 59.673 55.000 0.00 0.00 0.00 2.44
475 476 1.271707 CCGCTCCTTCCTACCCAAAAA 60.272 52.381 0.00 0.00 0.00 1.94
476 477 1.810755 CGCTCCTTCCTACCCAAAAAC 59.189 52.381 0.00 0.00 0.00 2.43
477 478 1.810755 GCTCCTTCCTACCCAAAAACG 59.189 52.381 0.00 0.00 0.00 3.60
478 479 2.551504 GCTCCTTCCTACCCAAAAACGA 60.552 50.000 0.00 0.00 0.00 3.85
479 480 3.746940 CTCCTTCCTACCCAAAAACGAA 58.253 45.455 0.00 0.00 0.00 3.85
480 481 3.746940 TCCTTCCTACCCAAAAACGAAG 58.253 45.455 0.00 0.00 0.00 3.79
481 482 2.228103 CCTTCCTACCCAAAAACGAAGC 59.772 50.000 0.00 0.00 0.00 3.86
482 483 1.900245 TCCTACCCAAAAACGAAGCC 58.100 50.000 0.00 0.00 0.00 4.35
483 484 1.143277 TCCTACCCAAAAACGAAGCCA 59.857 47.619 0.00 0.00 0.00 4.75
484 485 2.167662 CCTACCCAAAAACGAAGCCAT 58.832 47.619 0.00 0.00 0.00 4.40
485 486 2.094752 CCTACCCAAAAACGAAGCCATG 60.095 50.000 0.00 0.00 0.00 3.66
486 487 0.678950 ACCCAAAAACGAAGCCATGG 59.321 50.000 7.63 7.63 0.00 3.66
487 488 0.678950 CCCAAAAACGAAGCCATGGT 59.321 50.000 14.67 0.00 0.00 3.55
488 489 1.336795 CCCAAAAACGAAGCCATGGTC 60.337 52.381 14.67 5.80 0.00 4.02
489 490 1.665735 CCAAAAACGAAGCCATGGTCG 60.666 52.381 20.00 20.00 42.91 4.79
490 491 0.596082 AAAAACGAAGCCATGGTCGG 59.404 50.000 23.91 10.31 41.56 4.79
491 492 1.241315 AAAACGAAGCCATGGTCGGG 61.241 55.000 23.91 10.63 41.56 5.14
492 493 2.119484 AAACGAAGCCATGGTCGGGA 62.119 55.000 23.91 0.00 41.56 5.14
493 494 2.511600 CGAAGCCATGGTCGGGAC 60.512 66.667 14.67 0.00 33.62 4.46
507 508 2.741211 GGACGAGTTCCAACCGGC 60.741 66.667 0.00 0.00 45.10 6.13
508 509 2.741211 GACGAGTTCCAACCGGCC 60.741 66.667 0.00 0.00 0.00 6.13
509 510 3.236003 GACGAGTTCCAACCGGCCT 62.236 63.158 0.00 0.00 0.00 5.19
510 511 2.742372 CGAGTTCCAACCGGCCTG 60.742 66.667 0.00 0.00 0.00 4.85
511 512 2.359975 GAGTTCCAACCGGCCTGG 60.360 66.667 15.66 15.66 46.41 4.45
512 513 2.852075 AGTTCCAACCGGCCTGGA 60.852 61.111 19.54 19.54 41.33 3.86
513 514 2.671963 GTTCCAACCGGCCTGGAC 60.672 66.667 22.42 14.75 42.76 4.02
514 515 2.852075 TTCCAACCGGCCTGGACT 60.852 61.111 22.42 4.35 42.76 3.85
515 516 3.190738 TTCCAACCGGCCTGGACTG 62.191 63.158 22.42 14.18 42.76 3.51
516 517 4.722700 CCAACCGGCCTGGACTGG 62.723 72.222 16.63 18.10 42.00 4.00
517 518 4.722700 CAACCGGCCTGGACTGGG 62.723 72.222 18.74 4.87 42.00 4.45
524 525 4.052518 CCTGGACTGGGCAAGGGG 62.053 72.222 0.00 0.00 0.00 4.79
525 526 2.935481 CTGGACTGGGCAAGGGGA 60.935 66.667 0.00 0.00 0.00 4.81
526 527 2.935481 TGGACTGGGCAAGGGGAG 60.935 66.667 0.00 0.00 0.00 4.30
527 528 2.610859 GGACTGGGCAAGGGGAGA 60.611 66.667 0.00 0.00 0.00 3.71
528 529 2.231380 GGACTGGGCAAGGGGAGAA 61.231 63.158 0.00 0.00 0.00 2.87
529 530 1.002011 GACTGGGCAAGGGGAGAAC 60.002 63.158 0.00 0.00 0.00 3.01
530 531 1.774217 ACTGGGCAAGGGGAGAACA 60.774 57.895 0.00 0.00 0.00 3.18
546 547 1.940613 GAACAATAGCCGCACCCTTAG 59.059 52.381 0.00 0.00 0.00 2.18
557 558 2.975536 CCCTTAGGGTTCGCGACA 59.024 61.111 9.15 0.00 38.25 4.35
558 559 1.153628 CCCTTAGGGTTCGCGACAG 60.154 63.158 9.15 0.00 38.25 3.51
604 605 3.477210 TTTTGCCCATACCACAAAACC 57.523 42.857 0.00 0.00 38.11 3.27
605 606 0.962489 TTGCCCATACCACAAAACCG 59.038 50.000 0.00 0.00 0.00 4.44
609 610 2.717390 CCCATACCACAAAACCGATCA 58.283 47.619 0.00 0.00 0.00 2.92
616 617 2.101582 CCACAAAACCGATCAAACCCAA 59.898 45.455 0.00 0.00 0.00 4.12
619 620 3.244044 ACAAAACCGATCAAACCCAATGG 60.244 43.478 0.00 0.00 37.80 3.16
620 621 2.595750 AACCGATCAAACCCAATGGA 57.404 45.000 0.00 0.00 34.81 3.41
622 623 2.883026 ACCGATCAAACCCAATGGAAA 58.117 42.857 0.00 0.00 34.81 3.13
623 624 3.440127 ACCGATCAAACCCAATGGAAAT 58.560 40.909 0.00 0.00 34.81 2.17
624 625 3.447229 ACCGATCAAACCCAATGGAAATC 59.553 43.478 0.00 0.00 34.81 2.17
625 626 3.489059 CCGATCAAACCCAATGGAAATCG 60.489 47.826 0.00 7.66 34.76 3.34
626 627 3.489059 CGATCAAACCCAATGGAAATCGG 60.489 47.826 0.00 0.00 33.14 4.18
627 628 1.548269 TCAAACCCAATGGAAATCGGC 59.452 47.619 0.00 0.00 34.81 5.54
628 629 0.530288 AAACCCAATGGAAATCGGCG 59.470 50.000 0.00 0.00 34.81 6.46
629 630 1.319614 AACCCAATGGAAATCGGCGG 61.320 55.000 7.21 0.00 34.81 6.13
630 631 2.489275 CCCAATGGAAATCGGCGGG 61.489 63.158 7.21 0.00 0.00 6.13
631 632 2.412937 CAATGGAAATCGGCGGGC 59.587 61.111 7.21 0.00 0.00 6.13
632 633 2.833121 AATGGAAATCGGCGGGCC 60.833 61.111 7.21 0.00 0.00 5.80
645 646 4.832608 GGGCCGGCCGACTACAAG 62.833 72.222 38.22 9.14 36.85 3.16
647 648 4.752879 GCCGGCCGACTACAAGCA 62.753 66.667 30.73 0.00 0.00 3.91
648 649 2.047655 CCGGCCGACTACAAGCAA 60.048 61.111 30.73 0.00 0.00 3.91
649 650 2.388232 CCGGCCGACTACAAGCAAC 61.388 63.158 30.73 0.00 0.00 4.17
650 651 2.388232 CGGCCGACTACAAGCAACC 61.388 63.158 24.07 0.00 0.00 3.77
651 652 2.388232 GGCCGACTACAAGCAACCG 61.388 63.158 0.00 0.00 0.00 4.44
652 653 1.373748 GCCGACTACAAGCAACCGA 60.374 57.895 0.00 0.00 0.00 4.69
653 654 1.623973 GCCGACTACAAGCAACCGAC 61.624 60.000 0.00 0.00 0.00 4.79
654 655 1.342082 CCGACTACAAGCAACCGACG 61.342 60.000 0.00 0.00 0.00 5.12
655 656 1.779683 GACTACAAGCAACCGACGC 59.220 57.895 0.00 0.00 0.00 5.19
656 657 0.666577 GACTACAAGCAACCGACGCT 60.667 55.000 0.00 0.00 42.98 5.07
663 664 1.706443 AGCAACCGACGCTTTACTAC 58.294 50.000 0.00 0.00 35.82 2.73
664 665 0.364515 GCAACCGACGCTTTACTACG 59.635 55.000 0.00 0.00 0.00 3.51
665 666 0.364515 CAACCGACGCTTTACTACGC 59.635 55.000 0.00 0.00 0.00 4.42
675 676 4.220533 GCTTTACTACGCGAGGAATAGA 57.779 45.455 15.93 0.00 0.00 1.98
676 677 4.604976 GCTTTACTACGCGAGGAATAGAA 58.395 43.478 15.93 0.00 0.00 2.10
677 678 4.440431 GCTTTACTACGCGAGGAATAGAAC 59.560 45.833 15.93 0.00 0.00 3.01
678 679 2.752144 ACTACGCGAGGAATAGAACG 57.248 50.000 15.93 0.00 0.00 3.95
679 680 1.268437 ACTACGCGAGGAATAGAACGC 60.268 52.381 15.93 0.00 46.08 4.84
682 683 2.496718 GCGAGGAATAGAACGCTCG 58.503 57.895 0.00 0.00 46.06 5.03
683 684 0.248539 GCGAGGAATAGAACGCTCGT 60.249 55.000 0.00 0.00 46.06 4.18
684 685 1.003116 GCGAGGAATAGAACGCTCGTA 60.003 52.381 0.00 0.00 46.06 3.43
685 686 2.637595 CGAGGAATAGAACGCTCGTAC 58.362 52.381 0.00 0.00 0.00 3.67
686 687 2.637595 GAGGAATAGAACGCTCGTACG 58.362 52.381 9.53 9.53 39.50 3.67
687 688 1.332997 AGGAATAGAACGCTCGTACGG 59.667 52.381 16.52 7.41 37.37 4.02
688 689 1.598924 GGAATAGAACGCTCGTACGGG 60.599 57.143 16.52 14.27 37.37 5.28
689 690 1.064654 GAATAGAACGCTCGTACGGGT 59.935 52.381 17.95 9.24 37.37 5.28
690 691 1.098050 ATAGAACGCTCGTACGGGTT 58.902 50.000 17.95 16.95 41.91 4.11
691 692 0.881118 TAGAACGCTCGTACGGGTTT 59.119 50.000 17.95 10.41 39.72 3.27
692 693 0.032540 AGAACGCTCGTACGGGTTTT 59.967 50.000 17.95 10.03 39.72 2.43
693 694 0.861185 GAACGCTCGTACGGGTTTTT 59.139 50.000 17.95 7.36 39.72 1.94
717 718 3.974871 TTTTGGCAAGGTTAGAACGAC 57.025 42.857 0.00 0.00 0.00 4.34
718 719 2.922740 TTGGCAAGGTTAGAACGACT 57.077 45.000 0.00 0.00 0.00 4.18
719 720 2.922740 TGGCAAGGTTAGAACGACTT 57.077 45.000 0.00 0.00 0.00 3.01
720 721 2.489971 TGGCAAGGTTAGAACGACTTG 58.510 47.619 0.00 0.00 42.31 3.16
721 722 2.158871 TGGCAAGGTTAGAACGACTTGT 60.159 45.455 10.91 0.00 41.65 3.16
722 723 3.069872 TGGCAAGGTTAGAACGACTTGTA 59.930 43.478 10.91 2.29 41.65 2.41
723 724 3.431233 GGCAAGGTTAGAACGACTTGTAC 59.569 47.826 10.91 0.00 41.65 2.90
724 725 3.120782 GCAAGGTTAGAACGACTTGTACG 59.879 47.826 10.91 0.00 41.65 3.67
725 726 4.293415 CAAGGTTAGAACGACTTGTACGT 58.707 43.478 0.00 0.00 45.89 3.57
726 727 5.451908 CAAGGTTAGAACGACTTGTACGTA 58.548 41.667 0.00 0.00 43.16 3.57
727 728 5.035784 AGGTTAGAACGACTTGTACGTAC 57.964 43.478 18.90 18.90 43.16 3.67
728 729 3.840763 GGTTAGAACGACTTGTACGTACG 59.159 47.826 20.18 15.01 43.16 3.67
729 730 4.455124 GTTAGAACGACTTGTACGTACGT 58.545 43.478 25.98 25.98 43.16 3.57
730 731 2.908634 AGAACGACTTGTACGTACGTG 58.091 47.619 30.25 16.00 43.16 4.49
731 732 1.380115 GAACGACTTGTACGTACGTGC 59.620 52.381 30.25 28.42 43.16 5.34
732 733 0.588252 ACGACTTGTACGTACGTGCT 59.412 50.000 31.45 15.96 42.17 4.40
733 734 0.972717 CGACTTGTACGTACGTGCTG 59.027 55.000 31.45 25.53 0.00 4.41
734 735 1.334054 GACTTGTACGTACGTGCTGG 58.666 55.000 31.45 25.13 0.00 4.85
735 736 0.665369 ACTTGTACGTACGTGCTGGC 60.665 55.000 31.45 16.61 0.00 4.85
736 737 1.349259 CTTGTACGTACGTGCTGGCC 61.349 60.000 31.45 13.47 0.00 5.36
737 738 1.808531 TTGTACGTACGTGCTGGCCT 61.809 55.000 31.45 6.99 0.00 5.19
738 739 1.804326 GTACGTACGTGCTGGCCTG 60.804 63.158 30.25 4.26 0.00 4.85
739 740 2.270257 TACGTACGTGCTGGCCTGT 61.270 57.895 30.25 1.85 0.00 4.00
740 741 2.480853 TACGTACGTGCTGGCCTGTG 62.481 60.000 30.25 4.49 0.00 3.66
741 742 3.423154 GTACGTGCTGGCCTGTGC 61.423 66.667 11.69 9.99 0.00 4.57
742 743 3.625897 TACGTGCTGGCCTGTGCT 61.626 61.111 11.69 0.00 37.74 4.40
743 744 3.177194 TACGTGCTGGCCTGTGCTT 62.177 57.895 11.69 1.28 37.74 3.91
744 745 2.674563 TACGTGCTGGCCTGTGCTTT 62.675 55.000 11.69 1.69 37.74 3.51
745 746 2.848858 CGTGCTGGCCTGTGCTTTT 61.849 57.895 11.69 0.00 37.74 2.27
746 747 1.300388 GTGCTGGCCTGTGCTTTTG 60.300 57.895 11.69 0.00 37.74 2.44
747 748 2.341176 GCTGGCCTGTGCTTTTGG 59.659 61.111 11.69 0.00 37.74 3.28
748 749 2.501602 GCTGGCCTGTGCTTTTGGT 61.502 57.895 11.69 0.00 37.74 3.67
749 750 1.364901 CTGGCCTGTGCTTTTGGTG 59.635 57.895 3.32 0.00 37.74 4.17
750 751 1.381056 TGGCCTGTGCTTTTGGTGT 60.381 52.632 3.32 0.00 37.74 4.16
751 752 0.975040 TGGCCTGTGCTTTTGGTGTT 60.975 50.000 3.32 0.00 37.74 3.32
752 753 0.249447 GGCCTGTGCTTTTGGTGTTC 60.249 55.000 0.00 0.00 37.74 3.18
753 754 0.594796 GCCTGTGCTTTTGGTGTTCG 60.595 55.000 0.00 0.00 33.53 3.95
754 755 0.738389 CCTGTGCTTTTGGTGTTCGT 59.262 50.000 0.00 0.00 0.00 3.85
755 756 1.268539 CCTGTGCTTTTGGTGTTCGTC 60.269 52.381 0.00 0.00 0.00 4.20
756 757 0.736053 TGTGCTTTTGGTGTTCGTCC 59.264 50.000 0.00 0.00 0.00 4.79
761 762 0.529337 TTTTGGTGTTCGTCCGCGTA 60.529 50.000 4.92 0.00 39.49 4.42
802 803 6.864342 TGAAAGTCCTAGTGCTATACTTCAC 58.136 40.000 7.24 0.00 40.89 3.18
806 807 6.854578 AGTCCTAGTGCTATACTTCACCTAT 58.145 40.000 0.00 0.00 40.89 2.57
820 821 1.098050 ACCTATGTCCGTGTACGTCC 58.902 55.000 0.00 0.00 37.74 4.79
883 887 4.186159 ACAAGGTAATAACGGGATTGACG 58.814 43.478 0.00 0.00 37.36 4.35
977 997 5.111293 CAGAATCAAGAGGAGAAGAAGAGC 58.889 45.833 0.00 0.00 0.00 4.09
1048 1068 1.582610 TTTGGAATTGGAGGACGCGC 61.583 55.000 5.73 0.00 0.00 6.86
1068 1088 3.462021 GCTGAGGTACATGAAGATGGTC 58.538 50.000 0.00 0.00 33.39 4.02
1104 1124 1.135972 GCGACGTACAACGAGTTCCTA 60.136 52.381 6.44 0.00 46.05 2.94
1105 1125 2.665519 GCGACGTACAACGAGTTCCTAA 60.666 50.000 6.44 0.00 46.05 2.69
1106 1126 3.554524 CGACGTACAACGAGTTCCTAAA 58.445 45.455 6.44 0.00 46.05 1.85
1115 1135 1.659098 CGAGTTCCTAAACGTCATGGC 59.341 52.381 0.00 0.00 40.48 4.40
1117 1137 2.930682 GAGTTCCTAAACGTCATGGCTC 59.069 50.000 0.00 0.00 40.48 4.70
1138 1158 4.562767 TCATTACAAGAGGGGCAGGTATA 58.437 43.478 0.00 0.00 0.00 1.47
1139 1159 5.162637 TCATTACAAGAGGGGCAGGTATAT 58.837 41.667 0.00 0.00 0.00 0.86
1140 1160 6.327781 TCATTACAAGAGGGGCAGGTATATA 58.672 40.000 0.00 0.00 0.00 0.86
1141 1161 6.965866 TCATTACAAGAGGGGCAGGTATATAT 59.034 38.462 0.00 0.00 0.00 0.86
1146 1168 3.079072 AGAGGGGCAGGTATATATGTCCA 59.921 47.826 8.81 0.00 43.23 4.02
1167 1189 4.511454 CCAATCCATGTCGATCAACGTATT 59.489 41.667 0.00 0.00 43.13 1.89
1172 1194 7.402811 TCCATGTCGATCAACGTATTAATTC 57.597 36.000 0.00 0.00 43.13 2.17
1180 1202 5.651172 TCAACGTATTAATTCGCTCCATG 57.349 39.130 13.59 6.48 0.00 3.66
1181 1203 4.025229 TCAACGTATTAATTCGCTCCATGC 60.025 41.667 13.59 0.00 38.57 4.06
1182 1204 3.462982 ACGTATTAATTCGCTCCATGCA 58.537 40.909 13.59 0.00 43.06 3.96
1183 1205 4.065088 ACGTATTAATTCGCTCCATGCAT 58.935 39.130 13.59 0.00 43.06 3.96
1204 1226 1.141019 ATGGATCGACCGACCAACG 59.859 57.895 14.24 0.00 42.61 4.10
1205 1227 1.601419 ATGGATCGACCGACCAACGT 61.601 55.000 14.24 0.00 42.61 3.99
1206 1228 0.959867 TGGATCGACCGACCAACGTA 60.960 55.000 9.92 0.00 42.61 3.57
1207 1229 0.383231 GGATCGACCGACCAACGTAT 59.617 55.000 0.00 0.00 40.78 3.06
1208 1230 1.474017 GATCGACCGACCAACGTATG 58.526 55.000 0.00 0.00 40.78 2.39
1210 1232 1.447945 TCGACCGACCAACGTATGTA 58.552 50.000 0.00 0.00 40.78 2.29
1215 1237 2.756760 ACCGACCAACGTATGTATGACT 59.243 45.455 0.00 0.00 40.78 3.41
1216 1238 3.194116 ACCGACCAACGTATGTATGACTT 59.806 43.478 0.00 0.00 40.78 3.01
1231 1253 2.125552 CTTCGTGCAGGATCGGCA 60.126 61.111 10.35 6.59 39.32 5.69
1335 1357 1.965219 CCACCGGATCCGTCTATCC 59.035 63.158 31.22 0.00 41.85 2.59
1473 1499 2.227388 CGGGTACGTAGTGATCCATACC 59.773 54.545 0.00 0.00 45.73 2.73
1653 1694 0.455410 GCTTCAACGCCATATTGCCA 59.545 50.000 0.00 0.00 0.00 4.92
1937 1978 3.139603 TGCTCGATTTTGATGCATGTG 57.860 42.857 2.46 0.00 0.00 3.21
2043 2084 5.201713 TCATAACATGCTACTACCTCTGC 57.798 43.478 0.00 0.00 0.00 4.26
2157 2198 3.695606 GACGCCTCCTGCACTCCA 61.696 66.667 0.00 0.00 41.33 3.86
2171 2212 0.787084 ACTCCAAGTCTCCCTCTCCA 59.213 55.000 0.00 0.00 0.00 3.86
2193 2234 3.399181 CGCTTACCCCAGCCCTCA 61.399 66.667 0.00 0.00 36.31 3.86
2264 2305 4.415881 CCATGTGCTGGTAGGTGTATAA 57.584 45.455 0.00 0.00 40.49 0.98
2265 2306 4.973168 CCATGTGCTGGTAGGTGTATAAT 58.027 43.478 0.00 0.00 40.49 1.28
2294 2335 4.081050 AAGCCGAGGGTGCTTTTC 57.919 55.556 0.00 0.00 46.47 2.29
2295 2336 1.456287 AAGCCGAGGGTGCTTTTCT 59.544 52.632 0.00 0.00 46.47 2.52
2297 2338 0.912486 AGCCGAGGGTGCTTTTCTAT 59.088 50.000 0.00 0.00 34.87 1.98
2298 2339 2.116238 AGCCGAGGGTGCTTTTCTATA 58.884 47.619 0.00 0.00 34.87 1.31
2299 2340 2.103263 AGCCGAGGGTGCTTTTCTATAG 59.897 50.000 0.00 0.00 34.87 1.31
2321 2363 1.538047 AAAGACAATGCGTGGCTCAT 58.462 45.000 0.00 0.00 45.33 2.90
2342 2384 4.988716 ACGCCTCACCACTCCGGA 62.989 66.667 2.93 2.93 38.63 5.14
2345 2387 2.283966 CCTCACCACTCCGGACCT 60.284 66.667 0.00 0.00 38.63 3.85
2358 2400 1.078143 GGACCTCTGACATGTGGGC 60.078 63.158 1.15 0.00 0.00 5.36
2450 2492 6.474427 GCACGCATAGACAAGTTATGTTACTA 59.526 38.462 0.00 0.00 44.12 1.82
2458 2500 8.462143 AGACAAGTTATGTTACTACAATGACG 57.538 34.615 0.00 0.00 44.12 4.35
2459 2501 7.057149 ACAAGTTATGTTACTACAATGACGC 57.943 36.000 0.00 0.00 40.06 5.19
2460 2502 6.647481 ACAAGTTATGTTACTACAATGACGCA 59.353 34.615 0.00 0.00 40.06 5.24
2474 2544 5.858049 ACAATGACGCATAAACTGAACATTG 59.142 36.000 0.00 0.00 41.39 2.82
2487 2557 4.586001 ACTGAACATTGGATGCAAGTTCTT 59.414 37.500 26.34 17.81 39.33 2.52
2489 2559 5.916318 TGAACATTGGATGCAAGTTCTTTT 58.084 33.333 26.34 6.61 39.33 2.27
2502 2572 5.455392 CAAGTTCTTTTACTGCCACTGATG 58.545 41.667 0.00 0.00 0.00 3.07
2539 2609 7.047891 AGTATTCATTAGTTTCGAAGCCATCA 58.952 34.615 8.51 0.00 0.00 3.07
2579 2651 5.849357 ATTAATTGTTTGCGACGTAGACA 57.151 34.783 5.21 5.21 0.00 3.41
2585 2658 2.717580 TTGCGACGTAGACATCAGTT 57.282 45.000 0.00 0.00 0.00 3.16
2672 2745 2.847234 ACCTGCACCCCTCGAACA 60.847 61.111 0.00 0.00 0.00 3.18
2674 2747 2.743928 CTGCACCCCTCGAACAGC 60.744 66.667 0.00 0.00 0.00 4.40
2706 2779 1.704641 TCTATCGACCCTCCACATGG 58.295 55.000 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.412853 AAAGCATACGGTGGGTAAATAAATT 57.587 32.000 0.00 0.00 34.09 1.82
1 2 7.412853 AAAAGCATACGGTGGGTAAATAAAT 57.587 32.000 0.00 0.00 34.09 1.40
2 3 6.837471 AAAAGCATACGGTGGGTAAATAAA 57.163 33.333 0.00 0.00 34.09 1.40
3 4 6.208994 ACAAAAAGCATACGGTGGGTAAATAA 59.791 34.615 0.00 0.00 34.09 1.40
4 5 5.711036 ACAAAAAGCATACGGTGGGTAAATA 59.289 36.000 0.00 0.00 34.09 1.40
5 6 4.525100 ACAAAAAGCATACGGTGGGTAAAT 59.475 37.500 0.00 0.00 34.09 1.40
6 7 3.890147 ACAAAAAGCATACGGTGGGTAAA 59.110 39.130 0.00 0.00 34.09 2.01
7 8 3.488363 ACAAAAAGCATACGGTGGGTAA 58.512 40.909 0.00 0.00 34.09 2.85
8 9 3.143211 ACAAAAAGCATACGGTGGGTA 57.857 42.857 0.00 0.00 35.11 3.69
9 10 1.989706 ACAAAAAGCATACGGTGGGT 58.010 45.000 0.00 0.00 0.00 4.51
10 11 3.056304 CAAACAAAAAGCATACGGTGGG 58.944 45.455 0.00 0.00 0.00 4.61
11 12 3.971150 TCAAACAAAAAGCATACGGTGG 58.029 40.909 0.00 0.00 0.00 4.61
12 13 5.957910 TTTCAAACAAAAAGCATACGGTG 57.042 34.783 0.00 0.00 0.00 4.94
13 14 6.814146 TCTTTTTCAAACAAAAAGCATACGGT 59.186 30.769 12.68 0.00 43.36 4.83
14 15 7.227992 TCTTTTTCAAACAAAAAGCATACGG 57.772 32.000 12.68 0.00 43.36 4.02
15 16 9.198065 CTTTCTTTTTCAAACAAAAAGCATACG 57.802 29.630 12.68 0.00 43.36 3.06
16 17 8.998989 GCTTTCTTTTTCAAACAAAAAGCATAC 58.001 29.630 12.68 2.48 43.36 2.39
17 18 8.945057 AGCTTTCTTTTTCAAACAAAAAGCATA 58.055 25.926 17.89 1.69 43.36 3.14
18 19 7.819644 AGCTTTCTTTTTCAAACAAAAAGCAT 58.180 26.923 17.89 6.69 43.36 3.79
19 20 7.173047 AGAGCTTTCTTTTTCAAACAAAAAGCA 59.827 29.630 17.89 2.22 43.36 3.91
20 21 7.521529 AGAGCTTTCTTTTTCAAACAAAAAGC 58.478 30.769 12.68 11.67 43.36 3.51
22 23 9.705290 ACTAGAGCTTTCTTTTTCAAACAAAAA 57.295 25.926 0.00 0.00 0.00 1.94
23 24 9.139174 CACTAGAGCTTTCTTTTTCAAACAAAA 57.861 29.630 0.00 0.00 0.00 2.44
24 25 8.519526 TCACTAGAGCTTTCTTTTTCAAACAAA 58.480 29.630 0.00 0.00 0.00 2.83
25 26 8.050778 TCACTAGAGCTTTCTTTTTCAAACAA 57.949 30.769 0.00 0.00 0.00 2.83
26 27 7.624360 TCACTAGAGCTTTCTTTTTCAAACA 57.376 32.000 0.00 0.00 0.00 2.83
27 28 8.911247 TTTCACTAGAGCTTTCTTTTTCAAAC 57.089 30.769 0.00 0.00 0.00 2.93
34 35 8.246871 GCCATAATTTTCACTAGAGCTTTCTTT 58.753 33.333 0.00 0.00 0.00 2.52
35 36 7.148000 GGCCATAATTTTCACTAGAGCTTTCTT 60.148 37.037 0.00 0.00 0.00 2.52
36 37 6.319911 GGCCATAATTTTCACTAGAGCTTTCT 59.680 38.462 0.00 0.00 0.00 2.52
37 38 6.460261 GGGCCATAATTTTCACTAGAGCTTTC 60.460 42.308 4.39 0.00 0.00 2.62
38 39 5.360999 GGGCCATAATTTTCACTAGAGCTTT 59.639 40.000 4.39 0.00 0.00 3.51
39 40 4.889995 GGGCCATAATTTTCACTAGAGCTT 59.110 41.667 4.39 0.00 0.00 3.74
40 41 4.464947 GGGCCATAATTTTCACTAGAGCT 58.535 43.478 4.39 0.00 0.00 4.09
41 42 3.570125 GGGGCCATAATTTTCACTAGAGC 59.430 47.826 4.39 0.00 0.00 4.09
42 43 4.145052 GGGGGCCATAATTTTCACTAGAG 58.855 47.826 4.39 0.00 0.00 2.43
43 44 3.434453 CGGGGGCCATAATTTTCACTAGA 60.434 47.826 4.39 0.00 0.00 2.43
44 45 2.884639 CGGGGGCCATAATTTTCACTAG 59.115 50.000 4.39 0.00 0.00 2.57
45 46 2.423660 CCGGGGGCCATAATTTTCACTA 60.424 50.000 4.39 0.00 0.00 2.74
46 47 1.687996 CCGGGGGCCATAATTTTCACT 60.688 52.381 4.39 0.00 0.00 3.41
47 48 0.750249 CCGGGGGCCATAATTTTCAC 59.250 55.000 4.39 0.00 0.00 3.18
48 49 0.336737 ACCGGGGGCCATAATTTTCA 59.663 50.000 6.32 0.00 0.00 2.69
49 50 1.411246 GAACCGGGGGCCATAATTTTC 59.589 52.381 6.32 0.00 0.00 2.29
50 51 1.007842 AGAACCGGGGGCCATAATTTT 59.992 47.619 6.32 0.00 0.00 1.82
51 52 0.634465 AGAACCGGGGGCCATAATTT 59.366 50.000 6.32 0.00 0.00 1.82
52 53 1.144298 GTAGAACCGGGGGCCATAATT 59.856 52.381 6.32 0.00 0.00 1.40
53 54 0.769247 GTAGAACCGGGGGCCATAAT 59.231 55.000 6.32 0.00 0.00 1.28
54 55 1.347243 GGTAGAACCGGGGGCCATAA 61.347 60.000 6.32 0.00 0.00 1.90
55 56 1.767268 GGTAGAACCGGGGGCCATA 60.767 63.158 6.32 0.00 0.00 2.74
56 57 3.094498 GGTAGAACCGGGGGCCAT 61.094 66.667 6.32 0.00 0.00 4.40
57 58 3.876255 AAGGTAGAACCGGGGGCCA 62.876 63.158 6.32 0.00 44.90 5.36
58 59 1.273986 TAAAGGTAGAACCGGGGGCC 61.274 60.000 6.32 0.00 44.90 5.80
59 60 0.841961 ATAAAGGTAGAACCGGGGGC 59.158 55.000 6.32 0.00 44.90 5.80
60 61 4.987963 ATTATAAAGGTAGAACCGGGGG 57.012 45.455 6.32 0.00 44.90 5.40
97 98 9.646427 ACGGTAAATAAATTGCAACAATGTATT 57.354 25.926 0.00 9.09 0.00 1.89
98 99 9.646427 AACGGTAAATAAATTGCAACAATGTAT 57.354 25.926 0.00 0.00 0.00 2.29
100 101 7.954788 AACGGTAAATAAATTGCAACAATGT 57.045 28.000 0.00 0.00 0.00 2.71
157 158 8.840321 CGGTTAATTGTAAGGATCAAATCTCAT 58.160 33.333 0.00 0.00 0.00 2.90
158 159 7.827236 ACGGTTAATTGTAAGGATCAAATCTCA 59.173 33.333 0.00 0.00 0.00 3.27
159 160 8.209917 ACGGTTAATTGTAAGGATCAAATCTC 57.790 34.615 0.00 0.00 0.00 2.75
160 161 7.827236 TGACGGTTAATTGTAAGGATCAAATCT 59.173 33.333 0.00 0.00 0.00 2.40
161 162 7.981142 TGACGGTTAATTGTAAGGATCAAATC 58.019 34.615 0.00 0.00 0.00 2.17
162 163 7.931578 TGACGGTTAATTGTAAGGATCAAAT 57.068 32.000 0.00 0.00 0.00 2.32
163 164 7.094549 CCTTGACGGTTAATTGTAAGGATCAAA 60.095 37.037 0.00 0.00 36.23 2.69
164 165 6.373216 CCTTGACGGTTAATTGTAAGGATCAA 59.627 38.462 0.00 0.00 36.23 2.57
165 166 5.878116 CCTTGACGGTTAATTGTAAGGATCA 59.122 40.000 0.00 0.00 36.23 2.92
166 167 5.296035 CCCTTGACGGTTAATTGTAAGGATC 59.704 44.000 0.00 0.00 36.23 3.36
167 168 5.045432 TCCCTTGACGGTTAATTGTAAGGAT 60.045 40.000 0.00 0.00 36.23 3.24
168 169 4.286549 TCCCTTGACGGTTAATTGTAAGGA 59.713 41.667 0.00 0.00 36.23 3.36
169 170 4.581868 TCCCTTGACGGTTAATTGTAAGG 58.418 43.478 0.00 0.00 34.45 2.69
170 171 6.373216 TCAATCCCTTGACGGTTAATTGTAAG 59.627 38.462 0.00 0.00 36.46 2.34
171 172 6.239396 TCAATCCCTTGACGGTTAATTGTAA 58.761 36.000 0.00 0.00 36.46 2.41
172 173 5.806818 TCAATCCCTTGACGGTTAATTGTA 58.193 37.500 0.00 0.00 36.46 2.41
173 174 4.658063 TCAATCCCTTGACGGTTAATTGT 58.342 39.130 0.00 0.00 36.46 2.71
188 189 2.009681 AACAAGGGGTTGTCAATCCC 57.990 50.000 24.64 24.64 38.60 3.85
189 190 2.547855 GCAAACAAGGGGTTGTCAATCC 60.548 50.000 6.29 6.29 40.35 3.01
190 191 2.547855 GGCAAACAAGGGGTTGTCAATC 60.548 50.000 0.00 0.00 40.35 2.67
191 192 1.416030 GGCAAACAAGGGGTTGTCAAT 59.584 47.619 0.00 0.00 40.35 2.57
192 193 0.827368 GGCAAACAAGGGGTTGTCAA 59.173 50.000 0.00 0.00 40.35 3.18
193 194 0.032615 AGGCAAACAAGGGGTTGTCA 60.033 50.000 0.00 0.00 40.35 3.58
194 195 1.068588 GAAGGCAAACAAGGGGTTGTC 59.931 52.381 0.00 0.00 40.35 3.18
195 196 1.119684 GAAGGCAAACAAGGGGTTGT 58.880 50.000 0.00 0.00 40.35 3.32
196 197 0.031994 CGAAGGCAAACAAGGGGTTG 59.968 55.000 0.00 0.00 40.35 3.77
197 198 0.106419 TCGAAGGCAAACAAGGGGTT 60.106 50.000 0.00 0.00 42.98 4.11
198 199 0.112412 ATCGAAGGCAAACAAGGGGT 59.888 50.000 0.00 0.00 0.00 4.95
199 200 0.527565 CATCGAAGGCAAACAAGGGG 59.472 55.000 0.00 0.00 0.00 4.79
200 201 0.109132 GCATCGAAGGCAAACAAGGG 60.109 55.000 7.48 0.00 0.00 3.95
201 202 0.597568 TGCATCGAAGGCAAACAAGG 59.402 50.000 12.12 0.00 38.54 3.61
208 209 7.744087 ATAATAAATACTTGCATCGAAGGCA 57.256 32.000 10.67 10.67 40.00 4.75
209 210 9.118236 GAAATAATAAATACTTGCATCGAAGGC 57.882 33.333 5.56 5.56 0.00 4.35
210 211 9.318041 CGAAATAATAAATACTTGCATCGAAGG 57.682 33.333 0.00 0.00 0.00 3.46
211 212 9.864034 ACGAAATAATAAATACTTGCATCGAAG 57.136 29.630 3.87 0.00 0.00 3.79
212 213 9.644993 CACGAAATAATAAATACTTGCATCGAA 57.355 29.630 3.87 0.00 0.00 3.71
213 214 8.822855 ACACGAAATAATAAATACTTGCATCGA 58.177 29.630 3.87 0.00 0.00 3.59
214 215 8.882199 CACACGAAATAATAAATACTTGCATCG 58.118 33.333 0.00 0.00 0.00 3.84
215 216 9.716507 ACACACGAAATAATAAATACTTGCATC 57.283 29.630 0.00 0.00 0.00 3.91
227 228 9.425577 TGAAGAACACATACACACGAAATAATA 57.574 29.630 0.00 0.00 0.00 0.98
228 229 8.317891 TGAAGAACACATACACACGAAATAAT 57.682 30.769 0.00 0.00 0.00 1.28
229 230 7.716768 TGAAGAACACATACACACGAAATAA 57.283 32.000 0.00 0.00 0.00 1.40
253 254 0.250338 GGAACCTCGCAAGACCTTGT 60.250 55.000 10.96 0.00 45.01 3.16
254 255 0.250295 TGGAACCTCGCAAGACCTTG 60.250 55.000 5.44 5.44 45.01 3.61
255 256 0.250338 GTGGAACCTCGCAAGACCTT 60.250 55.000 0.00 0.00 45.01 3.50
256 257 1.122019 AGTGGAACCTCGCAAGACCT 61.122 55.000 0.00 0.00 43.64 3.85
257 258 0.606604 TAGTGGAACCTCGCAAGACC 59.393 55.000 0.00 0.00 43.64 3.85
258 259 1.272769 AGTAGTGGAACCTCGCAAGAC 59.727 52.381 0.00 0.00 43.64 3.01
260 261 1.714794 CAGTAGTGGAACCTCGCAAG 58.285 55.000 0.00 0.00 37.80 4.01
261 262 3.906660 CAGTAGTGGAACCTCGCAA 57.093 52.632 0.00 0.00 37.80 4.85
271 272 4.818546 CCAAGCTTATCAATCCAGTAGTGG 59.181 45.833 10.66 10.66 46.63 4.00
272 273 5.431765 ACCAAGCTTATCAATCCAGTAGTG 58.568 41.667 0.00 0.00 0.00 2.74
273 274 5.700402 ACCAAGCTTATCAATCCAGTAGT 57.300 39.130 0.00 0.00 0.00 2.73
274 275 6.352516 AGAACCAAGCTTATCAATCCAGTAG 58.647 40.000 0.00 0.00 0.00 2.57
275 276 6.313519 AGAACCAAGCTTATCAATCCAGTA 57.686 37.500 0.00 0.00 0.00 2.74
276 277 5.184892 AGAACCAAGCTTATCAATCCAGT 57.815 39.130 0.00 0.00 0.00 4.00
277 278 7.337942 AGTTAAGAACCAAGCTTATCAATCCAG 59.662 37.037 0.00 0.00 0.00 3.86
278 279 7.121168 CAGTTAAGAACCAAGCTTATCAATCCA 59.879 37.037 0.00 0.00 0.00 3.41
279 280 7.336931 TCAGTTAAGAACCAAGCTTATCAATCC 59.663 37.037 0.00 0.00 0.00 3.01
280 281 8.268850 TCAGTTAAGAACCAAGCTTATCAATC 57.731 34.615 0.00 0.00 0.00 2.67
281 282 7.337942 CCTCAGTTAAGAACCAAGCTTATCAAT 59.662 37.037 0.00 0.00 0.00 2.57
282 283 6.655003 CCTCAGTTAAGAACCAAGCTTATCAA 59.345 38.462 0.00 0.00 0.00 2.57
283 284 6.173339 CCTCAGTTAAGAACCAAGCTTATCA 58.827 40.000 0.00 0.00 0.00 2.15
284 285 5.586643 CCCTCAGTTAAGAACCAAGCTTATC 59.413 44.000 0.00 0.00 0.00 1.75
285 286 5.250774 TCCCTCAGTTAAGAACCAAGCTTAT 59.749 40.000 0.00 0.00 0.00 1.73
286 287 4.595781 TCCCTCAGTTAAGAACCAAGCTTA 59.404 41.667 0.00 0.00 0.00 3.09
287 288 3.394606 TCCCTCAGTTAAGAACCAAGCTT 59.605 43.478 0.00 0.00 0.00 3.74
288 289 2.979678 TCCCTCAGTTAAGAACCAAGCT 59.020 45.455 0.00 0.00 0.00 3.74
289 290 3.418684 TCCCTCAGTTAAGAACCAAGC 57.581 47.619 0.00 0.00 0.00 4.01
290 291 7.168905 AGTATTTCCCTCAGTTAAGAACCAAG 58.831 38.462 0.00 0.00 0.00 3.61
291 292 7.086685 AGTATTTCCCTCAGTTAAGAACCAA 57.913 36.000 0.00 0.00 0.00 3.67
292 293 6.697641 AGTATTTCCCTCAGTTAAGAACCA 57.302 37.500 0.00 0.00 0.00 3.67
293 294 9.327628 GATAAGTATTTCCCTCAGTTAAGAACC 57.672 37.037 0.00 0.00 0.00 3.62
296 297 9.716556 AGAGATAAGTATTTCCCTCAGTTAAGA 57.283 33.333 0.00 0.00 0.00 2.10
300 301 8.919145 CAGTAGAGATAAGTATTTCCCTCAGTT 58.081 37.037 0.00 0.00 0.00 3.16
301 302 8.062536 ACAGTAGAGATAAGTATTTCCCTCAGT 58.937 37.037 0.00 0.00 0.00 3.41
302 303 8.472007 ACAGTAGAGATAAGTATTTCCCTCAG 57.528 38.462 0.00 0.00 0.00 3.35
303 304 9.352191 GTACAGTAGAGATAAGTATTTCCCTCA 57.648 37.037 0.00 0.00 0.00 3.86
304 305 9.577222 AGTACAGTAGAGATAAGTATTTCCCTC 57.423 37.037 0.00 0.00 0.00 4.30
305 306 9.357161 CAGTACAGTAGAGATAAGTATTTCCCT 57.643 37.037 0.00 0.00 0.00 4.20
306 307 8.083462 GCAGTACAGTAGAGATAAGTATTTCCC 58.917 40.741 0.00 0.00 0.00 3.97
307 308 8.630917 TGCAGTACAGTAGAGATAAGTATTTCC 58.369 37.037 0.00 0.00 0.00 3.13
310 311 9.355916 TGATGCAGTACAGTAGAGATAAGTATT 57.644 33.333 0.00 0.00 0.00 1.89
311 312 8.926092 TGATGCAGTACAGTAGAGATAAGTAT 57.074 34.615 0.00 0.00 0.00 2.12
312 313 8.926092 ATGATGCAGTACAGTAGAGATAAGTA 57.074 34.615 0.00 0.00 0.00 2.24
313 314 7.831691 ATGATGCAGTACAGTAGAGATAAGT 57.168 36.000 0.00 0.00 0.00 2.24
314 315 9.539825 AAAATGATGCAGTACAGTAGAGATAAG 57.460 33.333 0.00 0.00 0.00 1.73
315 316 9.534565 GAAAATGATGCAGTACAGTAGAGATAA 57.465 33.333 0.00 0.00 0.00 1.75
316 317 8.918116 AGAAAATGATGCAGTACAGTAGAGATA 58.082 33.333 0.00 0.00 0.00 1.98
317 318 7.790027 AGAAAATGATGCAGTACAGTAGAGAT 58.210 34.615 0.00 0.00 0.00 2.75
318 319 7.123397 AGAGAAAATGATGCAGTACAGTAGAGA 59.877 37.037 0.00 0.00 0.00 3.10
319 320 7.264221 AGAGAAAATGATGCAGTACAGTAGAG 58.736 38.462 0.00 0.00 0.00 2.43
320 321 7.175347 AGAGAAAATGATGCAGTACAGTAGA 57.825 36.000 0.00 0.00 0.00 2.59
321 322 7.840342 AAGAGAAAATGATGCAGTACAGTAG 57.160 36.000 0.00 0.00 0.00 2.57
322 323 8.621532 AAAAGAGAAAATGATGCAGTACAGTA 57.378 30.769 0.00 0.00 0.00 2.74
323 324 7.308830 GGAAAAGAGAAAATGATGCAGTACAGT 60.309 37.037 0.00 0.00 0.00 3.55
324 325 7.025963 GGAAAAGAGAAAATGATGCAGTACAG 58.974 38.462 0.00 0.00 0.00 2.74
325 326 6.348458 CGGAAAAGAGAAAATGATGCAGTACA 60.348 38.462 0.00 0.00 0.00 2.90
326 327 6.024049 CGGAAAAGAGAAAATGATGCAGTAC 58.976 40.000 0.00 0.00 0.00 2.73
327 328 5.937540 TCGGAAAAGAGAAAATGATGCAGTA 59.062 36.000 0.00 0.00 0.00 2.74
328 329 4.761739 TCGGAAAAGAGAAAATGATGCAGT 59.238 37.500 0.00 0.00 0.00 4.40
329 330 5.300969 TCGGAAAAGAGAAAATGATGCAG 57.699 39.130 0.00 0.00 0.00 4.41
330 331 5.473162 TCTTCGGAAAAGAGAAAATGATGCA 59.527 36.000 0.00 0.00 0.00 3.96
331 332 5.942872 TCTTCGGAAAAGAGAAAATGATGC 58.057 37.500 0.00 0.00 0.00 3.91
332 333 8.976986 ATTTCTTCGGAAAAGAGAAAATGATG 57.023 30.769 6.67 0.00 45.52 3.07
333 334 9.631452 GAATTTCTTCGGAAAAGAGAAAATGAT 57.369 29.630 6.67 0.00 45.52 2.45
334 335 8.082242 GGAATTTCTTCGGAAAAGAGAAAATGA 58.918 33.333 6.67 0.00 45.52 2.57
335 336 7.867403 TGGAATTTCTTCGGAAAAGAGAAAATG 59.133 33.333 6.67 0.00 45.52 2.32
336 337 7.951591 TGGAATTTCTTCGGAAAAGAGAAAAT 58.048 30.769 6.67 0.00 45.52 1.82
337 338 7.341445 TGGAATTTCTTCGGAAAAGAGAAAA 57.659 32.000 6.67 0.00 45.52 2.29
338 339 6.952773 TGGAATTTCTTCGGAAAAGAGAAA 57.047 33.333 5.37 5.37 45.52 2.52
339 340 6.512741 CGTTGGAATTTCTTCGGAAAAGAGAA 60.513 38.462 0.00 0.00 45.52 2.87
340 341 5.049680 CGTTGGAATTTCTTCGGAAAAGAGA 60.050 40.000 0.00 0.00 45.52 3.10
341 342 5.147162 CGTTGGAATTTCTTCGGAAAAGAG 58.853 41.667 0.00 0.00 45.52 2.85
342 343 4.577283 ACGTTGGAATTTCTTCGGAAAAGA 59.423 37.500 0.00 0.00 45.52 2.52
343 344 4.855531 ACGTTGGAATTTCTTCGGAAAAG 58.144 39.130 0.00 0.00 45.52 2.27
344 345 4.904253 ACGTTGGAATTTCTTCGGAAAA 57.096 36.364 0.00 0.00 45.52 2.29
345 346 5.528320 AGTTACGTTGGAATTTCTTCGGAAA 59.472 36.000 0.00 0.00 46.29 3.13
346 347 5.058490 AGTTACGTTGGAATTTCTTCGGAA 58.942 37.500 0.00 0.00 31.75 4.30
347 348 4.634199 AGTTACGTTGGAATTTCTTCGGA 58.366 39.130 0.00 0.00 31.75 4.55
348 349 4.449743 TGAGTTACGTTGGAATTTCTTCGG 59.550 41.667 0.00 0.00 31.75 4.30
349 350 5.585500 TGAGTTACGTTGGAATTTCTTCG 57.415 39.130 0.00 2.41 31.75 3.79
350 351 8.718734 ACTTATGAGTTACGTTGGAATTTCTTC 58.281 33.333 0.00 0.00 29.87 2.87
351 352 8.617290 ACTTATGAGTTACGTTGGAATTTCTT 57.383 30.769 0.00 0.00 29.87 2.52
352 353 9.367444 CTACTTATGAGTTACGTTGGAATTTCT 57.633 33.333 0.00 0.00 37.33 2.52
353 354 8.114905 GCTACTTATGAGTTACGTTGGAATTTC 58.885 37.037 0.00 0.00 37.33 2.17
354 355 7.604927 TGCTACTTATGAGTTACGTTGGAATTT 59.395 33.333 0.00 0.00 37.33 1.82
355 356 7.064253 GTGCTACTTATGAGTTACGTTGGAATT 59.936 37.037 0.00 0.00 37.33 2.17
356 357 6.534079 GTGCTACTTATGAGTTACGTTGGAAT 59.466 38.462 0.00 0.00 37.33 3.01
357 358 5.865552 GTGCTACTTATGAGTTACGTTGGAA 59.134 40.000 0.00 0.00 37.33 3.53
358 359 5.404946 GTGCTACTTATGAGTTACGTTGGA 58.595 41.667 0.00 0.00 37.33 3.53
359 360 4.565564 GGTGCTACTTATGAGTTACGTTGG 59.434 45.833 0.00 0.00 37.33 3.77
360 361 4.264614 CGGTGCTACTTATGAGTTACGTTG 59.735 45.833 0.00 0.00 37.33 4.10
361 362 4.418392 CGGTGCTACTTATGAGTTACGTT 58.582 43.478 0.00 0.00 37.33 3.99
362 363 3.733077 GCGGTGCTACTTATGAGTTACGT 60.733 47.826 0.00 0.00 37.33 3.57
363 364 2.787680 GCGGTGCTACTTATGAGTTACG 59.212 50.000 0.00 0.00 37.33 3.18
364 365 3.121544 GGCGGTGCTACTTATGAGTTAC 58.878 50.000 0.00 0.00 37.33 2.50
365 366 2.101917 GGGCGGTGCTACTTATGAGTTA 59.898 50.000 0.00 0.00 37.33 2.24
366 367 1.134491 GGGCGGTGCTACTTATGAGTT 60.134 52.381 0.00 0.00 37.33 3.01
367 368 0.464452 GGGCGGTGCTACTTATGAGT 59.536 55.000 0.00 0.00 39.97 3.41
368 369 0.249911 GGGGCGGTGCTACTTATGAG 60.250 60.000 0.00 0.00 0.00 2.90
369 370 1.827394 GGGGCGGTGCTACTTATGA 59.173 57.895 0.00 0.00 0.00 2.15
370 371 1.594293 CGGGGCGGTGCTACTTATG 60.594 63.158 0.00 0.00 0.00 1.90
371 372 2.803817 CCGGGGCGGTGCTACTTAT 61.804 63.158 0.00 0.00 42.73 1.73
372 373 3.463585 CCGGGGCGGTGCTACTTA 61.464 66.667 0.00 0.00 42.73 2.24
384 385 3.727258 TGGTCTTGGATGCCGGGG 61.727 66.667 2.18 0.00 0.00 5.73
385 386 2.438434 GTGGTCTTGGATGCCGGG 60.438 66.667 2.18 0.00 0.00 5.73
386 387 2.438434 GGTGGTCTTGGATGCCGG 60.438 66.667 0.00 0.00 0.00 6.13
387 388 2.438434 GGGTGGTCTTGGATGCCG 60.438 66.667 0.00 0.00 0.00 5.69
388 389 2.043953 GGGGTGGTCTTGGATGCC 60.044 66.667 0.00 0.00 0.00 4.40
389 390 1.077429 GAGGGGTGGTCTTGGATGC 60.077 63.158 0.00 0.00 0.00 3.91
390 391 1.207488 TGGAGGGGTGGTCTTGGATG 61.207 60.000 0.00 0.00 0.00 3.51
391 392 0.477597 TTGGAGGGGTGGTCTTGGAT 60.478 55.000 0.00 0.00 0.00 3.41
392 393 1.073319 TTGGAGGGGTGGTCTTGGA 60.073 57.895 0.00 0.00 0.00 3.53
393 394 1.074951 GTTGGAGGGGTGGTCTTGG 59.925 63.158 0.00 0.00 0.00 3.61
394 395 0.537371 GTGTTGGAGGGGTGGTCTTG 60.537 60.000 0.00 0.00 0.00 3.02
395 396 1.716028 GGTGTTGGAGGGGTGGTCTT 61.716 60.000 0.00 0.00 0.00 3.01
396 397 2.154074 GGTGTTGGAGGGGTGGTCT 61.154 63.158 0.00 0.00 0.00 3.85
397 398 2.434774 GGTGTTGGAGGGGTGGTC 59.565 66.667 0.00 0.00 0.00 4.02
398 399 2.369015 TGGTGTTGGAGGGGTGGT 60.369 61.111 0.00 0.00 0.00 4.16
399 400 2.115266 GTGGTGTTGGAGGGGTGG 59.885 66.667 0.00 0.00 0.00 4.61
400 401 2.115266 GGTGGTGTTGGAGGGGTG 59.885 66.667 0.00 0.00 0.00 4.61
401 402 2.369015 TGGTGGTGTTGGAGGGGT 60.369 61.111 0.00 0.00 0.00 4.95
402 403 2.115266 GTGGTGGTGTTGGAGGGG 59.885 66.667 0.00 0.00 0.00 4.79
403 404 2.281484 CGTGGTGGTGTTGGAGGG 60.281 66.667 0.00 0.00 0.00 4.30
404 405 2.281484 CCGTGGTGGTGTTGGAGG 60.281 66.667 0.00 0.00 0.00 4.30
405 406 0.884704 CTTCCGTGGTGGTGTTGGAG 60.885 60.000 0.00 0.00 39.52 3.86
406 407 1.147376 CTTCCGTGGTGGTGTTGGA 59.853 57.895 0.00 0.00 39.52 3.53
407 408 0.884704 CTCTTCCGTGGTGGTGTTGG 60.885 60.000 0.00 0.00 39.52 3.77
408 409 0.105964 TCTCTTCCGTGGTGGTGTTG 59.894 55.000 0.00 0.00 39.52 3.33
409 410 0.834612 TTCTCTTCCGTGGTGGTGTT 59.165 50.000 0.00 0.00 39.52 3.32
410 411 0.393077 CTTCTCTTCCGTGGTGGTGT 59.607 55.000 0.00 0.00 39.52 4.16
411 412 0.679505 TCTTCTCTTCCGTGGTGGTG 59.320 55.000 0.00 0.00 39.52 4.17
412 413 0.969894 CTCTTCTCTTCCGTGGTGGT 59.030 55.000 0.00 0.00 39.52 4.16
413 414 1.257743 TCTCTTCTCTTCCGTGGTGG 58.742 55.000 0.00 0.00 40.09 4.61
414 415 2.610727 GGTTCTCTTCTCTTCCGTGGTG 60.611 54.545 0.00 0.00 0.00 4.17
415 416 1.619332 GGTTCTCTTCTCTTCCGTGGT 59.381 52.381 0.00 0.00 0.00 4.16
416 417 1.618837 TGGTTCTCTTCTCTTCCGTGG 59.381 52.381 0.00 0.00 0.00 4.94
417 418 2.610727 GGTGGTTCTCTTCTCTTCCGTG 60.611 54.545 0.00 0.00 0.00 4.94
418 419 1.619332 GGTGGTTCTCTTCTCTTCCGT 59.381 52.381 0.00 0.00 0.00 4.69
419 420 1.402984 CGGTGGTTCTCTTCTCTTCCG 60.403 57.143 0.00 0.00 0.00 4.30
420 421 1.066787 CCGGTGGTTCTCTTCTCTTCC 60.067 57.143 0.00 0.00 0.00 3.46
421 422 1.619332 ACCGGTGGTTCTCTTCTCTTC 59.381 52.381 6.12 0.00 27.29 2.87
422 423 1.344763 CACCGGTGGTTCTCTTCTCTT 59.655 52.381 27.57 0.00 31.02 2.85
423 424 0.969894 CACCGGTGGTTCTCTTCTCT 59.030 55.000 27.57 0.00 31.02 3.10
424 425 0.966920 TCACCGGTGGTTCTCTTCTC 59.033 55.000 33.40 0.00 31.02 2.87
425 426 1.344763 CTTCACCGGTGGTTCTCTTCT 59.655 52.381 33.40 0.00 31.02 2.85
426 427 1.343465 TCTTCACCGGTGGTTCTCTTC 59.657 52.381 33.40 0.00 31.02 2.87
427 428 1.344763 CTCTTCACCGGTGGTTCTCTT 59.655 52.381 33.40 0.00 31.02 2.85
428 429 0.969894 CTCTTCACCGGTGGTTCTCT 59.030 55.000 33.40 0.00 31.02 3.10
429 430 0.680061 ACTCTTCACCGGTGGTTCTC 59.320 55.000 33.40 0.00 31.02 2.87
430 431 1.893801 CTACTCTTCACCGGTGGTTCT 59.106 52.381 33.40 15.03 31.02 3.01
431 432 1.891150 TCTACTCTTCACCGGTGGTTC 59.109 52.381 33.40 0.00 31.02 3.62
432 433 2.005370 TCTACTCTTCACCGGTGGTT 57.995 50.000 33.40 15.66 31.02 3.67
433 434 1.893801 CTTCTACTCTTCACCGGTGGT 59.106 52.381 33.40 24.33 35.62 4.16
434 435 1.204941 CCTTCTACTCTTCACCGGTGG 59.795 57.143 33.40 19.88 0.00 4.61
435 436 1.404315 GCCTTCTACTCTTCACCGGTG 60.404 57.143 29.26 29.26 0.00 4.94
436 437 0.896226 GCCTTCTACTCTTCACCGGT 59.104 55.000 0.00 0.00 0.00 5.28
437 438 0.175989 GGCCTTCTACTCTTCACCGG 59.824 60.000 0.00 0.00 0.00 5.28
438 439 0.179134 CGGCCTTCTACTCTTCACCG 60.179 60.000 0.00 0.00 0.00 4.94
439 440 0.460459 GCGGCCTTCTACTCTTCACC 60.460 60.000 0.00 0.00 0.00 4.02
440 441 0.533032 AGCGGCCTTCTACTCTTCAC 59.467 55.000 0.00 0.00 0.00 3.18
441 442 0.818296 GAGCGGCCTTCTACTCTTCA 59.182 55.000 0.00 0.00 0.00 3.02
442 443 0.103390 GGAGCGGCCTTCTACTCTTC 59.897 60.000 0.00 0.00 0.00 2.87
443 444 2.203806 GGAGCGGCCTTCTACTCTT 58.796 57.895 0.00 0.00 0.00 2.85
444 445 3.942601 GGAGCGGCCTTCTACTCT 58.057 61.111 0.00 0.00 0.00 3.24
453 454 3.862991 GGGTAGGAAGGAGCGGCC 61.863 72.222 0.00 0.00 0.00 6.13
454 455 2.193087 TTTGGGTAGGAAGGAGCGGC 62.193 60.000 0.00 0.00 0.00 6.53
455 456 0.326927 TTTTGGGTAGGAAGGAGCGG 59.673 55.000 0.00 0.00 0.00 5.52
456 457 1.810755 GTTTTTGGGTAGGAAGGAGCG 59.189 52.381 0.00 0.00 0.00 5.03
457 458 1.810755 CGTTTTTGGGTAGGAAGGAGC 59.189 52.381 0.00 0.00 0.00 4.70
458 459 3.412237 TCGTTTTTGGGTAGGAAGGAG 57.588 47.619 0.00 0.00 0.00 3.69
459 460 3.746940 CTTCGTTTTTGGGTAGGAAGGA 58.253 45.455 0.00 0.00 34.37 3.36
460 461 2.228103 GCTTCGTTTTTGGGTAGGAAGG 59.772 50.000 0.00 0.00 36.98 3.46
461 462 2.228103 GGCTTCGTTTTTGGGTAGGAAG 59.772 50.000 0.00 0.00 38.58 3.46
462 463 2.232399 GGCTTCGTTTTTGGGTAGGAA 58.768 47.619 0.00 0.00 0.00 3.36
463 464 1.143277 TGGCTTCGTTTTTGGGTAGGA 59.857 47.619 0.00 0.00 0.00 2.94
464 465 1.611519 TGGCTTCGTTTTTGGGTAGG 58.388 50.000 0.00 0.00 0.00 3.18
465 466 2.094752 CCATGGCTTCGTTTTTGGGTAG 60.095 50.000 0.00 0.00 0.00 3.18
466 467 1.889829 CCATGGCTTCGTTTTTGGGTA 59.110 47.619 0.00 0.00 0.00 3.69
467 468 0.678950 CCATGGCTTCGTTTTTGGGT 59.321 50.000 0.00 0.00 0.00 4.51
468 469 0.678950 ACCATGGCTTCGTTTTTGGG 59.321 50.000 13.04 0.00 0.00 4.12
469 470 1.665735 CGACCATGGCTTCGTTTTTGG 60.666 52.381 13.04 0.00 0.00 3.28
470 471 1.665735 CCGACCATGGCTTCGTTTTTG 60.666 52.381 19.86 4.36 33.23 2.44
471 472 0.596082 CCGACCATGGCTTCGTTTTT 59.404 50.000 19.86 0.00 33.23 1.94
472 473 1.241315 CCCGACCATGGCTTCGTTTT 61.241 55.000 19.86 0.00 33.23 2.43
473 474 1.674322 CCCGACCATGGCTTCGTTT 60.674 57.895 19.86 0.00 33.23 3.60
474 475 2.046314 CCCGACCATGGCTTCGTT 60.046 61.111 19.86 0.00 33.23 3.85
475 476 3.000819 TCCCGACCATGGCTTCGT 61.001 61.111 19.86 0.00 33.23 3.85
476 477 2.511600 GTCCCGACCATGGCTTCG 60.512 66.667 13.04 14.77 34.93 3.79
477 478 2.511600 CGTCCCGACCATGGCTTC 60.512 66.667 13.04 1.29 0.00 3.86
478 479 3.000819 TCGTCCCGACCATGGCTT 61.001 61.111 13.04 0.00 0.00 4.35
479 480 3.461773 CTCGTCCCGACCATGGCT 61.462 66.667 13.04 0.00 0.00 4.75
480 481 3.310860 AACTCGTCCCGACCATGGC 62.311 63.158 13.04 3.65 0.00 4.40
481 482 1.153628 GAACTCGTCCCGACCATGG 60.154 63.158 11.19 11.19 0.00 3.66
482 483 1.153628 GGAACTCGTCCCGACCATG 60.154 63.158 0.00 0.00 41.10 3.66
483 484 3.295800 GGAACTCGTCCCGACCAT 58.704 61.111 0.00 0.00 41.10 3.55
491 492 2.741211 GGCCGGTTGGAACTCGTC 60.741 66.667 1.90 0.00 37.49 4.20
492 493 3.239253 AGGCCGGTTGGAACTCGT 61.239 61.111 1.90 0.00 37.49 4.18
493 494 2.742372 CAGGCCGGTTGGAACTCG 60.742 66.667 1.90 0.00 37.49 4.18
494 495 2.359975 CCAGGCCGGTTGGAACTC 60.360 66.667 18.98 0.00 37.96 3.01
495 496 2.852075 TCCAGGCCGGTTGGAACT 60.852 61.111 22.60 1.93 41.61 3.01
496 497 2.671963 GTCCAGGCCGGTTGGAAC 60.672 66.667 25.31 17.41 45.79 3.62
497 498 2.852075 AGTCCAGGCCGGTTGGAA 60.852 61.111 25.31 11.52 45.79 3.53
498 499 3.636231 CAGTCCAGGCCGGTTGGA 61.636 66.667 21.45 21.45 42.30 3.53
499 500 4.722700 CCAGTCCAGGCCGGTTGG 62.723 72.222 18.00 18.00 35.32 3.77
500 501 4.722700 CCCAGTCCAGGCCGGTTG 62.723 72.222 1.90 1.69 35.57 3.77
507 508 4.052518 CCCCTTGCCCAGTCCAGG 62.053 72.222 0.00 0.00 0.00 4.45
508 509 2.935481 TCCCCTTGCCCAGTCCAG 60.935 66.667 0.00 0.00 0.00 3.86
509 510 2.935481 CTCCCCTTGCCCAGTCCA 60.935 66.667 0.00 0.00 0.00 4.02
510 511 2.231380 TTCTCCCCTTGCCCAGTCC 61.231 63.158 0.00 0.00 0.00 3.85
511 512 1.002011 GTTCTCCCCTTGCCCAGTC 60.002 63.158 0.00 0.00 0.00 3.51
512 513 1.360393 TTGTTCTCCCCTTGCCCAGT 61.360 55.000 0.00 0.00 0.00 4.00
513 514 0.040204 ATTGTTCTCCCCTTGCCCAG 59.960 55.000 0.00 0.00 0.00 4.45
514 515 1.284785 CTATTGTTCTCCCCTTGCCCA 59.715 52.381 0.00 0.00 0.00 5.36
515 516 2.024306 GCTATTGTTCTCCCCTTGCCC 61.024 57.143 0.00 0.00 0.00 5.36
516 517 1.393603 GCTATTGTTCTCCCCTTGCC 58.606 55.000 0.00 0.00 0.00 4.52
517 518 1.393603 GGCTATTGTTCTCCCCTTGC 58.606 55.000 0.00 0.00 0.00 4.01
518 519 1.668419 CGGCTATTGTTCTCCCCTTG 58.332 55.000 0.00 0.00 0.00 3.61
519 520 0.107165 GCGGCTATTGTTCTCCCCTT 60.107 55.000 0.00 0.00 0.00 3.95
520 521 1.271840 TGCGGCTATTGTTCTCCCCT 61.272 55.000 0.00 0.00 0.00 4.79
521 522 1.095807 GTGCGGCTATTGTTCTCCCC 61.096 60.000 0.00 0.00 0.00 4.81
522 523 1.095807 GGTGCGGCTATTGTTCTCCC 61.096 60.000 0.00 0.00 0.00 4.30
523 524 1.095807 GGGTGCGGCTATTGTTCTCC 61.096 60.000 0.00 0.00 0.00 3.71
524 525 0.107654 AGGGTGCGGCTATTGTTCTC 60.108 55.000 0.00 0.00 0.00 2.87
525 526 0.328258 AAGGGTGCGGCTATTGTTCT 59.672 50.000 0.00 0.00 0.00 3.01
526 527 1.940613 CTAAGGGTGCGGCTATTGTTC 59.059 52.381 0.00 0.00 0.00 3.18
527 528 1.408266 CCTAAGGGTGCGGCTATTGTT 60.408 52.381 0.00 0.00 0.00 2.83
528 529 0.180406 CCTAAGGGTGCGGCTATTGT 59.820 55.000 0.00 0.00 0.00 2.71
529 530 0.535102 CCCTAAGGGTGCGGCTATTG 60.535 60.000 0.00 0.00 38.25 1.90
530 531 1.837090 CCCTAAGGGTGCGGCTATT 59.163 57.895 0.00 0.00 38.25 1.73
552 553 2.164624 AGGAATATATCTCGCCTGTCGC 59.835 50.000 0.00 0.00 38.27 5.19
555 556 4.344978 TGCTAGGAATATATCTCGCCTGT 58.655 43.478 0.00 0.00 0.00 4.00
556 557 4.991153 TGCTAGGAATATATCTCGCCTG 57.009 45.455 0.00 0.00 0.00 4.85
557 558 5.069781 GGAATGCTAGGAATATATCTCGCCT 59.930 44.000 0.00 0.00 0.00 5.52
558 559 5.069781 AGGAATGCTAGGAATATATCTCGCC 59.930 44.000 0.00 0.00 0.00 5.54
588 589 1.404035 GATCGGTTTTGTGGTATGGGC 59.596 52.381 0.00 0.00 0.00 5.36
589 590 2.717390 TGATCGGTTTTGTGGTATGGG 58.283 47.619 0.00 0.00 0.00 4.00
594 595 1.684450 GGGTTTGATCGGTTTTGTGGT 59.316 47.619 0.00 0.00 0.00 4.16
604 605 3.489059 CCGATTTCCATTGGGTTTGATCG 60.489 47.826 2.09 10.41 35.02 3.69
605 606 3.737972 GCCGATTTCCATTGGGTTTGATC 60.738 47.826 2.09 0.00 34.62 2.92
609 610 0.530288 CGCCGATTTCCATTGGGTTT 59.470 50.000 2.09 0.00 34.62 3.27
628 629 4.832608 CTTGTAGTCGGCCGGCCC 62.833 72.222 39.24 26.31 0.00 5.80
630 631 4.752879 TGCTTGTAGTCGGCCGGC 62.753 66.667 25.39 25.39 0.00 6.13
631 632 2.047655 TTGCTTGTAGTCGGCCGG 60.048 61.111 27.83 8.29 0.00 6.13
632 633 2.388232 GGTTGCTTGTAGTCGGCCG 61.388 63.158 22.12 22.12 0.00 6.13
633 634 2.388232 CGGTTGCTTGTAGTCGGCC 61.388 63.158 0.00 0.00 0.00 6.13
634 635 1.373748 TCGGTTGCTTGTAGTCGGC 60.374 57.895 0.00 0.00 0.00 5.54
635 636 1.342082 CGTCGGTTGCTTGTAGTCGG 61.342 60.000 0.00 0.00 0.00 4.79
636 637 1.941476 GCGTCGGTTGCTTGTAGTCG 61.941 60.000 0.00 0.00 0.00 4.18
637 638 0.666577 AGCGTCGGTTGCTTGTAGTC 60.667 55.000 0.00 0.00 40.48 2.59
638 639 1.366366 AGCGTCGGTTGCTTGTAGT 59.634 52.632 0.00 0.00 40.48 2.73
639 640 4.261888 AGCGTCGGTTGCTTGTAG 57.738 55.556 0.00 0.00 40.48 2.74
644 645 1.706443 GTAGTAAAGCGTCGGTTGCT 58.294 50.000 10.91 13.76 46.68 3.91
645 646 0.364515 CGTAGTAAAGCGTCGGTTGC 59.635 55.000 10.91 7.12 0.00 4.17
646 647 0.364515 GCGTAGTAAAGCGTCGGTTG 59.635 55.000 10.91 0.00 0.00 3.77
647 648 2.729378 GCGTAGTAAAGCGTCGGTT 58.271 52.632 3.34 3.34 0.00 4.44
648 649 4.465413 GCGTAGTAAAGCGTCGGT 57.535 55.556 0.00 0.00 0.00 4.69
654 655 4.220533 TCTATTCCTCGCGTAGTAAAGC 57.779 45.455 5.77 0.00 0.00 3.51
655 656 4.669728 CGTTCTATTCCTCGCGTAGTAAAG 59.330 45.833 5.77 0.00 0.00 1.85
656 657 4.591202 CGTTCTATTCCTCGCGTAGTAAA 58.409 43.478 5.77 0.05 0.00 2.01
657 658 3.546815 GCGTTCTATTCCTCGCGTAGTAA 60.547 47.826 5.77 0.00 39.35 2.24
658 659 2.032549 GCGTTCTATTCCTCGCGTAGTA 60.033 50.000 5.77 0.00 39.35 1.82
659 660 1.268437 GCGTTCTATTCCTCGCGTAGT 60.268 52.381 5.77 0.00 39.35 2.73
660 661 1.396644 GCGTTCTATTCCTCGCGTAG 58.603 55.000 5.77 0.00 39.35 3.51
661 662 3.539253 GCGTTCTATTCCTCGCGTA 57.461 52.632 5.77 0.00 39.35 4.42
662 663 4.396854 GCGTTCTATTCCTCGCGT 57.603 55.556 5.77 0.00 39.35 6.01
666 667 2.601741 CCGTACGAGCGTTCTATTCCTC 60.602 54.545 18.76 0.00 0.00 3.71
667 668 1.332997 CCGTACGAGCGTTCTATTCCT 59.667 52.381 18.76 0.00 0.00 3.36
668 669 1.598924 CCCGTACGAGCGTTCTATTCC 60.599 57.143 18.76 0.00 0.00 3.01
669 670 1.064654 ACCCGTACGAGCGTTCTATTC 59.935 52.381 18.76 0.00 0.00 1.75
670 671 1.098050 ACCCGTACGAGCGTTCTATT 58.902 50.000 18.76 0.00 0.00 1.73
671 672 1.098050 AACCCGTACGAGCGTTCTAT 58.902 50.000 18.76 0.00 0.00 1.98
672 673 0.881118 AAACCCGTACGAGCGTTCTA 59.119 50.000 18.76 0.00 0.00 2.10
673 674 0.032540 AAAACCCGTACGAGCGTTCT 59.967 50.000 18.76 0.00 0.00 3.01
674 675 0.861185 AAAAACCCGTACGAGCGTTC 59.139 50.000 18.76 0.00 0.00 3.95
675 676 2.990642 AAAAACCCGTACGAGCGTT 58.009 47.368 18.76 12.71 0.00 4.84
676 677 4.756630 AAAAACCCGTACGAGCGT 57.243 50.000 18.76 6.82 0.00 5.07
696 697 3.949113 AGTCGTTCTAACCTTGCCAAAAA 59.051 39.130 0.00 0.00 0.00 1.94
697 698 3.547746 AGTCGTTCTAACCTTGCCAAAA 58.452 40.909 0.00 0.00 0.00 2.44
698 699 3.202829 AGTCGTTCTAACCTTGCCAAA 57.797 42.857 0.00 0.00 0.00 3.28
699 700 2.875933 CAAGTCGTTCTAACCTTGCCAA 59.124 45.455 0.00 0.00 0.00 4.52
700 701 2.158871 ACAAGTCGTTCTAACCTTGCCA 60.159 45.455 10.09 0.00 38.24 4.92
701 702 2.490991 ACAAGTCGTTCTAACCTTGCC 58.509 47.619 10.09 0.00 38.24 4.52
702 703 3.120782 CGTACAAGTCGTTCTAACCTTGC 59.879 47.826 10.09 0.00 38.24 4.01
703 704 4.293415 ACGTACAAGTCGTTCTAACCTTG 58.707 43.478 9.11 9.11 38.38 3.61
704 705 4.574599 ACGTACAAGTCGTTCTAACCTT 57.425 40.909 0.00 0.00 38.38 3.50
705 706 4.377431 CGTACGTACAAGTCGTTCTAACCT 60.377 45.833 24.50 0.00 41.72 3.50
706 707 3.840763 CGTACGTACAAGTCGTTCTAACC 59.159 47.826 24.50 0.00 41.72 2.85
707 708 4.315738 CACGTACGTACAAGTCGTTCTAAC 59.684 45.833 22.34 0.00 41.72 2.34
708 709 4.454231 CACGTACGTACAAGTCGTTCTAA 58.546 43.478 22.34 0.00 41.72 2.10
709 710 3.664276 GCACGTACGTACAAGTCGTTCTA 60.664 47.826 22.34 0.00 41.72 2.10
710 711 2.908634 CACGTACGTACAAGTCGTTCT 58.091 47.619 22.34 0.00 41.72 3.01
711 712 1.380115 GCACGTACGTACAAGTCGTTC 59.620 52.381 22.34 7.91 41.72 3.95
712 713 1.002468 AGCACGTACGTACAAGTCGTT 60.002 47.619 22.34 1.58 41.72 3.85
713 714 0.588252 AGCACGTACGTACAAGTCGT 59.412 50.000 22.34 13.73 43.86 4.34
714 715 0.972717 CAGCACGTACGTACAAGTCG 59.027 55.000 22.34 13.08 0.00 4.18
715 716 1.334054 CCAGCACGTACGTACAAGTC 58.666 55.000 22.34 10.59 0.00 3.01
716 717 0.665369 GCCAGCACGTACGTACAAGT 60.665 55.000 22.34 12.84 0.00 3.16
717 718 1.349259 GGCCAGCACGTACGTACAAG 61.349 60.000 22.34 16.55 0.00 3.16
718 719 1.373246 GGCCAGCACGTACGTACAA 60.373 57.895 22.34 0.00 0.00 2.41
719 720 2.259204 GGCCAGCACGTACGTACA 59.741 61.111 22.34 0.00 0.00 2.90
720 721 1.804326 CAGGCCAGCACGTACGTAC 60.804 63.158 22.34 16.33 0.00 3.67
721 722 2.270257 ACAGGCCAGCACGTACGTA 61.270 57.895 22.34 0.00 0.00 3.57
722 723 3.612681 ACAGGCCAGCACGTACGT 61.613 61.111 16.72 16.72 0.00 3.57
723 724 3.112075 CACAGGCCAGCACGTACG 61.112 66.667 15.01 15.01 0.00 3.67
724 725 3.423154 GCACAGGCCAGCACGTAC 61.423 66.667 5.01 0.00 0.00 3.67
725 726 2.674563 AAAGCACAGGCCAGCACGTA 62.675 55.000 5.01 0.00 42.56 3.57
726 727 4.569180 AAGCACAGGCCAGCACGT 62.569 61.111 5.01 0.00 42.56 4.49
727 728 2.848858 AAAAGCACAGGCCAGCACG 61.849 57.895 5.01 0.00 42.56 5.34
728 729 1.300388 CAAAAGCACAGGCCAGCAC 60.300 57.895 5.01 0.00 42.56 4.40
729 730 2.500714 CCAAAAGCACAGGCCAGCA 61.501 57.895 5.01 0.00 42.56 4.41
730 731 2.341176 CCAAAAGCACAGGCCAGC 59.659 61.111 5.01 6.06 42.56 4.85
731 732 1.364901 CACCAAAAGCACAGGCCAG 59.635 57.895 5.01 0.00 42.56 4.85
732 733 0.975040 AACACCAAAAGCACAGGCCA 60.975 50.000 5.01 0.00 42.56 5.36
733 734 0.249447 GAACACCAAAAGCACAGGCC 60.249 55.000 0.00 0.00 42.56 5.19
734 735 0.594796 CGAACACCAAAAGCACAGGC 60.595 55.000 0.00 0.00 41.61 4.85
735 736 0.738389 ACGAACACCAAAAGCACAGG 59.262 50.000 0.00 0.00 0.00 4.00
736 737 1.268539 GGACGAACACCAAAAGCACAG 60.269 52.381 0.00 0.00 0.00 3.66
737 738 0.736053 GGACGAACACCAAAAGCACA 59.264 50.000 0.00 0.00 0.00 4.57
738 739 0.316689 CGGACGAACACCAAAAGCAC 60.317 55.000 0.00 0.00 0.00 4.40
739 740 2.018544 CGGACGAACACCAAAAGCA 58.981 52.632 0.00 0.00 0.00 3.91
740 741 1.370051 GCGGACGAACACCAAAAGC 60.370 57.895 0.00 0.00 0.00 3.51
741 742 1.083015 CGCGGACGAACACCAAAAG 60.083 57.895 0.00 0.00 43.93 2.27
742 743 0.529337 TACGCGGACGAACACCAAAA 60.529 50.000 12.47 0.00 43.93 2.44
743 744 1.067084 TACGCGGACGAACACCAAA 59.933 52.632 12.47 0.00 43.93 3.28
744 745 1.661197 GTACGCGGACGAACACCAA 60.661 57.895 5.31 0.00 43.93 3.67
745 746 2.050168 GTACGCGGACGAACACCA 60.050 61.111 5.31 0.00 43.93 4.17
746 747 1.922135 TAGGTACGCGGACGAACACC 61.922 60.000 16.72 0.00 43.93 4.16
747 748 0.109781 TTAGGTACGCGGACGAACAC 60.110 55.000 16.72 0.12 43.93 3.32
748 749 0.810648 ATTAGGTACGCGGACGAACA 59.189 50.000 16.72 0.00 43.93 3.18
749 750 1.913317 AATTAGGTACGCGGACGAAC 58.087 50.000 16.72 0.99 43.93 3.95
750 751 2.652941 AAATTAGGTACGCGGACGAA 57.347 45.000 16.72 12.71 43.93 3.85
751 752 2.164219 AGAAAATTAGGTACGCGGACGA 59.836 45.455 16.72 2.40 43.93 4.20
753 754 2.606272 CCAGAAAATTAGGTACGCGGAC 59.394 50.000 14.70 14.70 0.00 4.79
754 755 2.896168 CCAGAAAATTAGGTACGCGGA 58.104 47.619 12.47 0.00 0.00 5.54
755 756 1.329599 GCCAGAAAATTAGGTACGCGG 59.670 52.381 12.47 0.00 0.00 6.46
756 757 1.005347 CGCCAGAAAATTAGGTACGCG 60.005 52.381 3.53 3.53 0.00 6.01
761 762 2.489938 TCAGCGCCAGAAAATTAGGT 57.510 45.000 2.29 0.00 0.00 3.08
802 803 0.383231 GGGACGTACACGGACATAGG 59.617 60.000 0.00 0.00 44.95 2.57
806 807 1.228215 TCAGGGACGTACACGGACA 60.228 57.895 0.00 0.00 44.95 4.02
820 821 0.459237 CGGCAGCTACTTGACTCAGG 60.459 60.000 0.00 0.00 0.00 3.86
855 856 3.839490 TCCCGTTATTACCTTGTCCTTGA 59.161 43.478 0.00 0.00 0.00 3.02
1048 1068 4.743057 TGACCATCTTCATGTACCTCAG 57.257 45.455 0.00 0.00 0.00 3.35
1094 1114 2.929592 GCCATGACGTTTAGGAACTCGT 60.930 50.000 0.00 0.00 41.75 4.18
1104 1124 4.323417 TCTTGTAATGAGCCATGACGTTT 58.677 39.130 0.00 0.00 28.06 3.60
1105 1125 3.935203 CTCTTGTAATGAGCCATGACGTT 59.065 43.478 0.00 0.00 31.00 3.99
1106 1126 3.525537 CTCTTGTAATGAGCCATGACGT 58.474 45.455 0.00 0.00 31.00 4.34
1115 1135 1.561542 ACCTGCCCCTCTTGTAATGAG 59.438 52.381 0.00 0.00 37.82 2.90
1117 1137 3.864789 ATACCTGCCCCTCTTGTAATG 57.135 47.619 0.00 0.00 0.00 1.90
1138 1158 5.488262 TGATCGACATGGATTGGACATAT 57.512 39.130 0.00 0.00 0.00 1.78
1139 1159 4.953940 TGATCGACATGGATTGGACATA 57.046 40.909 0.00 0.00 0.00 2.29
1140 1160 3.843893 TGATCGACATGGATTGGACAT 57.156 42.857 0.00 0.00 0.00 3.06
1141 1161 3.270027 GTTGATCGACATGGATTGGACA 58.730 45.455 8.31 0.00 0.00 4.02
1146 1168 7.962964 ATTAATACGTTGATCGACATGGATT 57.037 32.000 13.58 8.43 42.86 3.01
1180 1202 1.595109 TCGGTCGATCCATGCATGC 60.595 57.895 21.69 11.82 35.57 4.06
1181 1203 1.224069 GGTCGGTCGATCCATGCATG 61.224 60.000 20.19 20.19 35.57 4.06
1182 1204 1.069765 GGTCGGTCGATCCATGCAT 59.930 57.895 0.00 0.00 35.57 3.96
1183 1205 1.893919 TTGGTCGGTCGATCCATGCA 61.894 55.000 12.68 0.00 35.57 3.96
1204 1226 4.041740 TCCTGCACGAAGTCATACATAC 57.958 45.455 0.00 0.00 41.61 2.39
1205 1227 4.556699 CGATCCTGCACGAAGTCATACATA 60.557 45.833 0.00 0.00 41.61 2.29
1206 1228 3.722147 GATCCTGCACGAAGTCATACAT 58.278 45.455 0.00 0.00 41.61 2.29
1207 1229 2.479560 CGATCCTGCACGAAGTCATACA 60.480 50.000 0.00 0.00 41.61 2.29
1208 1230 2.120232 CGATCCTGCACGAAGTCATAC 58.880 52.381 0.00 0.00 41.61 2.39
1210 1232 0.179100 CCGATCCTGCACGAAGTCAT 60.179 55.000 0.00 0.00 41.61 3.06
1215 1237 1.521457 GATGCCGATCCTGCACGAA 60.521 57.895 6.71 0.00 42.38 3.85
1216 1238 2.106938 GATGCCGATCCTGCACGA 59.893 61.111 6.71 0.00 42.38 4.35
1279 1301 0.108804 TTGAAGCCGACGATGAGGTC 60.109 55.000 0.00 0.00 0.00 3.85
1352 1374 1.405821 AGGTCGTTGGCTTCTCTATCG 59.594 52.381 0.00 0.00 0.00 2.92
1353 1375 3.449632 GAAGGTCGTTGGCTTCTCTATC 58.550 50.000 0.00 0.00 0.00 2.08
1354 1376 2.159226 CGAAGGTCGTTGGCTTCTCTAT 60.159 50.000 0.00 0.00 34.72 1.98
1473 1499 7.279615 TCCAACCAACCATGAACTATACATAG 58.720 38.462 0.00 0.00 36.46 2.23
1537 1567 0.324923 AGCCATGCATGAACCCACAT 60.325 50.000 28.31 0.74 0.00 3.21
1601 1642 2.742116 GGCCTATCCCGGAACAGCA 61.742 63.158 0.73 0.00 0.00 4.41
1653 1694 3.616076 CGACCTTGATCTTGTGCTCTCTT 60.616 47.826 0.00 0.00 0.00 2.85
1714 1755 4.584325 GTCATCTAGGCTCACTTCTCTCAT 59.416 45.833 0.00 0.00 0.00 2.90
1937 1978 7.999679 TGATTTAGGTTGGAATCAATGTGATC 58.000 34.615 0.00 0.00 38.82 2.92
2078 2119 9.268268 TGTAAGATTGTTTAGACCACTAAAGTG 57.732 33.333 3.02 3.02 45.42 3.16
2115 2156 7.980099 TCGTTTCCCATTAGAAAATACTCTCTC 59.020 37.037 0.00 0.00 37.49 3.20
2116 2157 7.764901 GTCGTTTCCCATTAGAAAATACTCTCT 59.235 37.037 0.00 0.00 37.49 3.10
2117 2158 7.254017 CGTCGTTTCCCATTAGAAAATACTCTC 60.254 40.741 0.00 0.00 37.49 3.20
2157 2198 2.630580 GCGATAATGGAGAGGGAGACTT 59.369 50.000 0.00 0.00 0.00 3.01
2171 2212 0.400594 GGGCTGGGGTAAGCGATAAT 59.599 55.000 0.00 0.00 44.52 1.28
2193 2234 2.099405 CCAAGGGAATGGCGTTATTGT 58.901 47.619 0.00 0.00 32.78 2.71
2263 2304 7.709182 GCACCCTCGGCTTTTATTTAATTAATT 59.291 33.333 5.89 5.89 0.00 1.40
2264 2305 7.069455 AGCACCCTCGGCTTTTATTTAATTAAT 59.931 33.333 0.00 0.00 38.81 1.40
2265 2306 6.378848 AGCACCCTCGGCTTTTATTTAATTAA 59.621 34.615 0.00 0.00 38.81 1.40
2293 2334 5.064707 GCCACGCATTGTCTTTTTCTATAGA 59.935 40.000 0.00 0.00 0.00 1.98
2294 2335 5.065218 AGCCACGCATTGTCTTTTTCTATAG 59.935 40.000 0.00 0.00 0.00 1.31
2295 2336 4.941263 AGCCACGCATTGTCTTTTTCTATA 59.059 37.500 0.00 0.00 0.00 1.31
2297 2338 3.146066 AGCCACGCATTGTCTTTTTCTA 58.854 40.909 0.00 0.00 0.00 2.10
2298 2339 1.956477 AGCCACGCATTGTCTTTTTCT 59.044 42.857 0.00 0.00 0.00 2.52
2299 2340 2.287547 TGAGCCACGCATTGTCTTTTTC 60.288 45.455 0.00 0.00 0.00 2.29
2321 2363 2.741092 GAGTGGTGAGGCGTTGGA 59.259 61.111 0.00 0.00 0.00 3.53
2342 2384 2.959484 CGGCCCACATGTCAGAGGT 61.959 63.158 0.00 0.00 0.00 3.85
2345 2387 2.482796 AATGCGGCCCACATGTCAGA 62.483 55.000 6.68 0.00 0.00 3.27
2397 2439 2.422832 GGTCACTTCTTCCGTATCGAGT 59.577 50.000 0.00 0.00 0.00 4.18
2400 2442 1.823828 CGGTCACTTCTTCCGTATCG 58.176 55.000 0.00 0.00 39.51 2.92
2450 2492 5.627499 ATGTTCAGTTTATGCGTCATTGT 57.373 34.783 0.00 0.00 0.00 2.71
2455 2497 4.678509 TCCAATGTTCAGTTTATGCGTC 57.321 40.909 0.00 0.00 0.00 5.19
2456 2498 4.675146 GCATCCAATGTTCAGTTTATGCGT 60.675 41.667 0.00 0.00 30.42 5.24
2457 2499 3.792956 GCATCCAATGTTCAGTTTATGCG 59.207 43.478 0.00 0.00 30.42 4.73
2458 2500 4.746729 TGCATCCAATGTTCAGTTTATGC 58.253 39.130 0.00 0.00 39.08 3.14
2459 2501 6.392354 ACTTGCATCCAATGTTCAGTTTATG 58.608 36.000 0.00 0.00 0.00 1.90
2460 2502 6.594788 ACTTGCATCCAATGTTCAGTTTAT 57.405 33.333 0.00 0.00 0.00 1.40
2474 2544 3.255642 TGGCAGTAAAAGAACTTGCATCC 59.744 43.478 0.00 0.00 0.00 3.51
2487 2557 4.634012 AGGTAACATCAGTGGCAGTAAA 57.366 40.909 0.00 0.00 41.41 2.01
2489 2559 4.634012 AAAGGTAACATCAGTGGCAGTA 57.366 40.909 0.00 0.00 41.41 2.74
2539 2609 1.305201 ATTGTTGTGTCCTTCGCGTT 58.695 45.000 5.77 0.00 0.00 4.84
2706 2779 9.840427 CATGATACGTGGGAAAATAAATAATCC 57.160 33.333 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.