Multiple sequence alignment - TraesCS2D01G495300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G495300 chr2D 100.000 2881 0 0 1 2881 592091215 592094095 0.000000e+00 5321.0
1 TraesCS2D01G495300 chr2D 87.134 1228 115 15 664 1891 592115137 592116321 0.000000e+00 1352.0
2 TraesCS2D01G495300 chr2D 88.172 930 65 21 960 1886 592080355 592081242 0.000000e+00 1066.0
3 TraesCS2D01G495300 chr2D 81.142 753 84 34 1042 1765 592031200 592031923 4.200000e-153 551.0
4 TraesCS2D01G495300 chr2D 81.437 501 67 16 2183 2663 19634260 19634754 1.250000e-103 387.0
5 TraesCS2D01G495300 chr2D 85.890 163 15 6 82 240 592077273 592077431 1.780000e-37 167.0
6 TraesCS2D01G495300 chr2D 84.496 129 12 1 1895 2015 592081313 592081441 1.400000e-23 121.0
7 TraesCS2D01G495300 chr2B 86.794 1204 97 30 703 1891 717775477 717776633 0.000000e+00 1286.0
8 TraesCS2D01G495300 chr2B 90.704 753 58 3 1150 1891 717693910 717694661 0.000000e+00 992.0
9 TraesCS2D01G495300 chr2B 79.895 761 98 34 1044 1771 717678658 717679396 9.210000e-140 507.0
10 TraesCS2D01G495300 chr2B 84.802 329 38 7 1069 1394 717131603 717131922 1.290000e-83 320.0
11 TraesCS2D01G495300 chr2B 80.000 150 10 9 314 461 717772854 717772985 3.060000e-15 93.5
12 TraesCS2D01G495300 chr2B 86.567 67 4 5 2117 2181 673707531 673707468 5.150000e-08 69.4
13 TraesCS2D01G495300 chr2B 88.679 53 3 3 2129 2181 679891867 679891818 8.620000e-06 62.1
14 TraesCS2D01G495300 chr2A 82.632 1140 115 40 1627 2731 726593317 726594408 0.000000e+00 931.0
15 TraesCS2D01G495300 chr2A 91.734 617 49 2 971 1587 726592704 726593318 0.000000e+00 856.0
16 TraesCS2D01G495300 chr2A 80.676 740 80 31 1050 1771 726560843 726561537 1.530000e-142 516.0
17 TraesCS2D01G495300 chr2A 79.503 483 69 20 2194 2663 257785946 257786411 1.670000e-82 316.0
18 TraesCS2D01G495300 chr2A 86.296 270 22 10 202 462 726581553 726581816 2.190000e-71 279.0
19 TraesCS2D01G495300 chr2A 90.345 145 11 1 17 161 726581407 726581548 1.360000e-43 187.0
20 TraesCS2D01G495300 chr5D 81.224 490 62 21 2193 2663 547504390 547504868 4.540000e-98 368.0
21 TraesCS2D01G495300 chr7B 80.522 498 77 14 2183 2663 748331222 748331716 5.870000e-97 364.0
22 TraesCS2D01G495300 chr7B 91.071 56 2 3 2126 2181 608187707 608187655 3.980000e-09 73.1
23 TraesCS2D01G495300 chr6A 82.367 431 63 7 2186 2607 410340555 410340981 2.110000e-96 363.0
24 TraesCS2D01G495300 chr5A 80.730 493 72 16 2189 2663 41047316 41047803 2.110000e-96 363.0
25 TraesCS2D01G495300 chr7A 81.092 476 61 18 2183 2638 437074507 437074973 1.270000e-93 353.0
26 TraesCS2D01G495300 chr4B 79.839 496 75 18 2183 2658 575044783 575045273 3.560000e-89 339.0
27 TraesCS2D01G495300 chr4B 87.692 65 6 2 2117 2181 408974962 408974900 1.110000e-09 75.0
28 TraesCS2D01G495300 chr7D 80.165 484 68 20 2183 2647 45887522 45887048 1.280000e-88 337.0
29 TraesCS2D01G495300 chr4D 81.034 174 31 2 2709 2881 95504056 95503884 1.390000e-28 137.0
30 TraesCS2D01G495300 chr3B 91.071 56 3 2 2126 2181 5606990 5607043 1.110000e-09 75.0
31 TraesCS2D01G495300 chr3D 85.294 68 8 2 2115 2181 567082077 567082011 5.150000e-08 69.4
32 TraesCS2D01G495300 chr1B 88.333 60 4 3 2122 2181 21522193 21522249 5.150000e-08 69.4
33 TraesCS2D01G495300 chr6B 85.075 67 8 2 2115 2181 708404497 708404561 1.850000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G495300 chr2D 592091215 592094095 2880 False 5321.000000 5321 100.000 1 2881 1 chr2D.!!$F3 2880
1 TraesCS2D01G495300 chr2D 592115137 592116321 1184 False 1352.000000 1352 87.134 664 1891 1 chr2D.!!$F4 1227
2 TraesCS2D01G495300 chr2D 592031200 592031923 723 False 551.000000 551 81.142 1042 1765 1 chr2D.!!$F2 723
3 TraesCS2D01G495300 chr2D 592077273 592081441 4168 False 451.333333 1066 86.186 82 2015 3 chr2D.!!$F5 1933
4 TraesCS2D01G495300 chr2B 717693910 717694661 751 False 992.000000 992 90.704 1150 1891 1 chr2B.!!$F3 741
5 TraesCS2D01G495300 chr2B 717772854 717776633 3779 False 689.750000 1286 83.397 314 1891 2 chr2B.!!$F4 1577
6 TraesCS2D01G495300 chr2B 717678658 717679396 738 False 507.000000 507 79.895 1044 1771 1 chr2B.!!$F2 727
7 TraesCS2D01G495300 chr2A 726592704 726594408 1704 False 893.500000 931 87.183 971 2731 2 chr2A.!!$F4 1760
8 TraesCS2D01G495300 chr2A 726560843 726561537 694 False 516.000000 516 80.676 1050 1771 1 chr2A.!!$F2 721

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
508 3032 0.036388 TTGGCGATCTTCCGAAAGCT 60.036 50.0 0.0 0.0 32.18 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2090 7062 0.249826 TGTGTGCATCTCTCGTTGCA 60.25 50.0 0.0 0.0 46.03 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 2.900716 TGGTTAACCAAAGGCAAAGC 57.099 45.000 25.19 0.00 44.35 3.51
43 44 2.393646 TGGTTAACCAAAGGCAAAGCT 58.606 42.857 25.19 0.00 44.35 3.74
44 45 2.769095 TGGTTAACCAAAGGCAAAGCTT 59.231 40.909 25.19 0.00 44.35 3.74
45 46 3.181470 TGGTTAACCAAAGGCAAAGCTTC 60.181 43.478 25.19 0.00 44.35 3.86
46 47 3.181470 GGTTAACCAAAGGCAAAGCTTCA 60.181 43.478 20.12 0.00 35.64 3.02
47 48 4.503123 GGTTAACCAAAGGCAAAGCTTCAT 60.503 41.667 20.12 0.00 35.64 2.57
48 49 3.391506 AACCAAAGGCAAAGCTTCATC 57.608 42.857 0.00 0.00 0.00 2.92
49 50 2.318908 ACCAAAGGCAAAGCTTCATCA 58.681 42.857 0.00 0.00 0.00 3.07
50 51 2.036346 ACCAAAGGCAAAGCTTCATCAC 59.964 45.455 0.00 0.00 0.00 3.06
51 52 2.611224 CCAAAGGCAAAGCTTCATCACC 60.611 50.000 0.00 0.00 0.00 4.02
52 53 0.883833 AAGGCAAAGCTTCATCACCG 59.116 50.000 0.00 0.00 0.00 4.94
53 54 0.962356 AGGCAAAGCTTCATCACCGG 60.962 55.000 0.00 0.00 0.00 5.28
54 55 1.153958 GCAAAGCTTCATCACCGGC 60.154 57.895 0.00 0.00 0.00 6.13
55 56 1.135315 CAAAGCTTCATCACCGGCG 59.865 57.895 0.00 0.00 0.00 6.46
56 57 2.040544 AAAGCTTCATCACCGGCGG 61.041 57.895 27.06 27.06 0.00 6.13
57 58 3.976701 AAGCTTCATCACCGGCGGG 62.977 63.158 31.78 19.08 40.11 6.13
58 59 4.467084 GCTTCATCACCGGCGGGA 62.467 66.667 31.78 23.75 36.97 5.14
59 60 2.505982 CTTCATCACCGGCGGGAT 59.494 61.111 31.78 24.87 36.97 3.85
60 61 1.889105 CTTCATCACCGGCGGGATG 60.889 63.158 33.22 33.22 41.73 3.51
61 62 3.399105 TTCATCACCGGCGGGATGG 62.399 63.158 35.47 24.90 40.94 3.51
62 63 3.860605 CATCACCGGCGGGATGGA 61.861 66.667 32.25 23.97 37.77 3.41
63 64 2.849162 ATCACCGGCGGGATGGAT 60.849 61.111 31.78 22.34 36.97 3.41
64 65 2.883828 ATCACCGGCGGGATGGATC 61.884 63.158 31.78 0.00 36.97 3.36
65 66 3.860605 CACCGGCGGGATGGATCA 61.861 66.667 31.78 0.00 36.97 2.92
66 67 3.087253 ACCGGCGGGATGGATCAA 61.087 61.111 31.78 0.00 36.97 2.57
67 68 2.281070 CCGGCGGGATGGATCAAG 60.281 66.667 20.56 0.00 34.06 3.02
68 69 2.807107 CCGGCGGGATGGATCAAGA 61.807 63.158 20.56 0.00 34.06 3.02
69 70 1.595382 CGGCGGGATGGATCAAGAC 60.595 63.158 0.00 0.00 0.00 3.01
70 71 1.526887 GGCGGGATGGATCAAGACA 59.473 57.895 0.00 0.00 0.00 3.41
71 72 0.109342 GGCGGGATGGATCAAGACAT 59.891 55.000 0.00 0.00 0.00 3.06
72 73 1.233019 GCGGGATGGATCAAGACATG 58.767 55.000 0.00 0.00 0.00 3.21
73 74 1.475751 GCGGGATGGATCAAGACATGT 60.476 52.381 0.00 0.00 0.00 3.21
74 75 2.224281 GCGGGATGGATCAAGACATGTA 60.224 50.000 0.00 0.00 0.00 2.29
75 76 3.744214 GCGGGATGGATCAAGACATGTAA 60.744 47.826 0.00 0.00 0.00 2.41
76 77 4.645535 CGGGATGGATCAAGACATGTAAT 58.354 43.478 0.00 0.00 0.00 1.89
77 78 5.793817 CGGGATGGATCAAGACATGTAATA 58.206 41.667 0.00 0.00 0.00 0.98
78 79 5.639506 CGGGATGGATCAAGACATGTAATAC 59.360 44.000 0.00 0.00 0.00 1.89
79 80 6.519043 CGGGATGGATCAAGACATGTAATACT 60.519 42.308 0.00 0.00 0.00 2.12
80 81 7.309805 CGGGATGGATCAAGACATGTAATACTA 60.310 40.741 0.00 0.00 0.00 1.82
133 134 2.154462 GCAATTGACTGTACCTGCACT 58.846 47.619 10.34 0.00 0.00 4.40
136 137 4.314961 CAATTGACTGTACCTGCACTACA 58.685 43.478 0.00 0.00 0.00 2.74
137 138 3.380479 TTGACTGTACCTGCACTACAC 57.620 47.619 0.00 0.00 0.00 2.90
139 140 3.758425 TGACTGTACCTGCACTACACTA 58.242 45.455 0.00 0.00 0.00 2.74
161 163 9.803315 CACTACTATGACTAGCTTGTAATCAAA 57.197 33.333 0.94 0.00 32.87 2.69
168 170 7.438564 TGACTAGCTTGTAATCAAACTGTACA 58.561 34.615 0.00 0.00 33.00 2.90
177 179 5.530519 AATCAAACTGTACATGCACTACG 57.469 39.130 0.00 0.00 0.00 3.51
183 185 3.442625 ACTGTACATGCACTACGCTTCTA 59.557 43.478 0.00 0.00 43.06 2.10
184 186 4.098044 ACTGTACATGCACTACGCTTCTAT 59.902 41.667 0.00 0.00 43.06 1.98
185 187 5.006153 TGTACATGCACTACGCTTCTATT 57.994 39.130 0.00 0.00 43.06 1.73
188 190 5.263968 ACATGCACTACGCTTCTATTACT 57.736 39.130 0.00 0.00 43.06 2.24
196 198 4.745837 ACGCTTCTATTACTAGGCTACG 57.254 45.455 0.00 0.00 0.00 3.51
203 205 8.819974 GCTTCTATTACTAGGCTACGACTATAG 58.180 40.741 0.00 0.00 0.00 1.31
209 211 5.792741 ACTAGGCTACGACTATAGTAGTGG 58.207 45.833 24.02 22.15 42.49 4.00
211 213 5.046288 AGGCTACGACTATAGTAGTGGTT 57.954 43.478 24.02 13.32 43.83 3.67
213 215 4.578105 GGCTACGACTATAGTAGTGGTTGT 59.422 45.833 24.02 7.16 43.83 3.32
245 2752 2.050077 GCTTGTTGGAGGCGTTGC 60.050 61.111 0.00 0.00 0.00 4.17
248 2755 2.715864 CTTGTTGGAGGCGTTGCACG 62.716 60.000 4.61 4.61 45.88 5.34
257 2764 2.048597 CGTTGCACGCTCACCCTA 60.049 61.111 0.00 0.00 33.65 3.53
258 2765 1.666553 CGTTGCACGCTCACCCTAA 60.667 57.895 0.00 0.00 33.65 2.69
259 2766 1.019278 CGTTGCACGCTCACCCTAAT 61.019 55.000 0.00 0.00 33.65 1.73
260 2767 1.737696 CGTTGCACGCTCACCCTAATA 60.738 52.381 0.00 0.00 33.65 0.98
261 2768 2.352388 GTTGCACGCTCACCCTAATAA 58.648 47.619 0.00 0.00 0.00 1.40
262 2769 2.309528 TGCACGCTCACCCTAATAAG 57.690 50.000 0.00 0.00 0.00 1.73
263 2770 0.938008 GCACGCTCACCCTAATAAGC 59.062 55.000 0.00 0.00 0.00 3.09
264 2771 1.473434 GCACGCTCACCCTAATAAGCT 60.473 52.381 0.00 0.00 32.55 3.74
265 2772 2.223971 GCACGCTCACCCTAATAAGCTA 60.224 50.000 0.00 0.00 32.55 3.32
266 2773 3.643763 CACGCTCACCCTAATAAGCTAG 58.356 50.000 0.00 0.00 32.55 3.42
267 2774 2.036089 ACGCTCACCCTAATAAGCTAGC 59.964 50.000 6.62 6.62 32.55 3.42
268 2775 2.297597 CGCTCACCCTAATAAGCTAGCT 59.702 50.000 12.68 12.68 32.55 3.32
269 2776 3.612955 CGCTCACCCTAATAAGCTAGCTC 60.613 52.174 19.65 0.00 32.55 4.09
270 2777 3.612955 GCTCACCCTAATAAGCTAGCTCG 60.613 52.174 19.65 4.45 0.00 5.03
271 2778 2.891580 TCACCCTAATAAGCTAGCTCGG 59.108 50.000 19.65 12.93 0.00 4.63
272 2779 2.028930 CACCCTAATAAGCTAGCTCGGG 60.029 54.545 19.65 22.18 36.52 5.14
273 2780 1.066787 CCCTAATAAGCTAGCTCGGGC 60.067 57.143 19.65 0.00 39.06 6.13
274 2781 1.066787 CCTAATAAGCTAGCTCGGGCC 60.067 57.143 19.65 0.00 39.73 5.80
275 2782 1.896465 CTAATAAGCTAGCTCGGGCCT 59.104 52.381 19.65 3.31 39.73 5.19
276 2783 0.682292 AATAAGCTAGCTCGGGCCTC 59.318 55.000 19.65 0.00 39.73 4.70
277 2784 0.470080 ATAAGCTAGCTCGGGCCTCA 60.470 55.000 19.65 0.00 39.73 3.86
278 2785 0.686441 TAAGCTAGCTCGGGCCTCAA 60.686 55.000 19.65 0.00 39.73 3.02
279 2786 1.965754 AAGCTAGCTCGGGCCTCAAG 61.966 60.000 19.65 0.00 39.73 3.02
280 2787 2.107953 CTAGCTCGGGCCTCAAGC 59.892 66.667 2.00 14.30 39.73 4.01
282 2789 2.641439 CTAGCTCGGGCCTCAAGCTG 62.641 65.000 26.82 17.13 45.58 4.24
284 2791 4.399395 CTCGGGCCTCAAGCTGCA 62.399 66.667 0.84 0.00 43.05 4.41
285 2792 4.704833 TCGGGCCTCAAGCTGCAC 62.705 66.667 0.84 0.00 43.05 4.57
287 2794 4.666253 GGGCCTCAAGCTGCACCA 62.666 66.667 0.84 0.00 43.05 4.17
288 2795 2.362120 GGCCTCAAGCTGCACCAT 60.362 61.111 1.02 0.00 43.05 3.55
289 2796 2.707849 GGCCTCAAGCTGCACCATG 61.708 63.158 1.02 0.00 43.05 3.66
290 2797 2.882876 CCTCAAGCTGCACCATGC 59.117 61.111 1.02 0.00 45.29 4.06
300 2807 3.678921 GCACCATGCATGCATTCAT 57.321 47.368 30.32 15.61 44.26 2.57
301 2808 1.497991 GCACCATGCATGCATTCATC 58.502 50.000 30.32 15.76 44.26 2.92
302 2809 1.068588 GCACCATGCATGCATTCATCT 59.931 47.619 30.32 6.96 44.26 2.90
303 2810 2.295070 GCACCATGCATGCATTCATCTA 59.705 45.455 30.32 0.74 44.26 1.98
304 2811 3.611766 GCACCATGCATGCATTCATCTAG 60.612 47.826 30.32 16.62 44.26 2.43
305 2812 3.057526 CACCATGCATGCATTCATCTAGG 60.058 47.826 30.32 25.83 33.90 3.02
306 2813 3.181437 ACCATGCATGCATTCATCTAGGA 60.181 43.478 30.32 0.00 33.90 2.94
307 2814 4.017126 CCATGCATGCATTCATCTAGGAT 58.983 43.478 30.32 3.02 33.90 3.24
308 2815 4.142381 CCATGCATGCATTCATCTAGGATG 60.142 45.833 30.32 15.61 33.90 3.51
309 2816 4.360951 TGCATGCATTCATCTAGGATGA 57.639 40.909 18.46 6.17 33.57 2.92
310 2817 4.918588 TGCATGCATTCATCTAGGATGAT 58.081 39.130 18.46 0.52 33.57 2.45
311 2818 5.321927 TGCATGCATTCATCTAGGATGATT 58.678 37.500 18.46 5.36 33.57 2.57
312 2819 5.414765 TGCATGCATTCATCTAGGATGATTC 59.585 40.000 18.46 4.80 33.57 2.52
318 2825 8.193438 TGCATTCATCTAGGATGATTCGTATAG 58.807 37.037 10.44 0.00 0.00 1.31
337 2844 6.369065 CGTATAGCTTTTGAGGAGAAAACAGT 59.631 38.462 0.00 0.00 0.00 3.55
345 2852 8.925161 TTTTGAGGAGAAAACAGTGTTAATTG 57.075 30.769 9.37 0.00 0.00 2.32
356 2863 1.991965 GTGTTAATTGCAACGCCATGG 59.008 47.619 7.63 7.63 33.71 3.66
362 2869 3.683937 GCAACGCCATGGCCAAGT 61.684 61.111 30.79 19.92 37.98 3.16
363 2870 2.259204 CAACGCCATGGCCAAGTG 59.741 61.111 30.79 18.45 37.98 3.16
364 2871 2.115052 AACGCCATGGCCAAGTGA 59.885 55.556 30.79 0.00 37.98 3.41
367 2874 1.080569 CGCCATGGCCAAGTGAAAC 60.081 57.895 30.79 0.00 37.98 2.78
371 2878 1.548582 CCATGGCCAAGTGAAACCTCT 60.549 52.381 10.96 0.00 37.80 3.69
372 2879 2.290896 CCATGGCCAAGTGAAACCTCTA 60.291 50.000 10.96 0.00 37.80 2.43
373 2880 2.561478 TGGCCAAGTGAAACCTCTAC 57.439 50.000 0.61 0.00 37.80 2.59
374 2881 1.771854 TGGCCAAGTGAAACCTCTACA 59.228 47.619 0.61 0.00 37.80 2.74
375 2882 2.173782 TGGCCAAGTGAAACCTCTACAA 59.826 45.455 0.61 0.00 37.80 2.41
376 2883 2.814336 GGCCAAGTGAAACCTCTACAAG 59.186 50.000 0.00 0.00 37.80 3.16
377 2884 3.477530 GCCAAGTGAAACCTCTACAAGT 58.522 45.455 0.00 0.00 37.80 3.16
378 2885 4.504340 GGCCAAGTGAAACCTCTACAAGTA 60.504 45.833 0.00 0.00 37.80 2.24
379 2886 4.451435 GCCAAGTGAAACCTCTACAAGTAC 59.549 45.833 0.00 0.00 37.80 2.73
380 2887 5.607477 CCAAGTGAAACCTCTACAAGTACA 58.393 41.667 0.00 0.00 37.80 2.90
381 2888 6.231211 CCAAGTGAAACCTCTACAAGTACAT 58.769 40.000 0.00 0.00 37.80 2.29
382 2889 6.369065 CCAAGTGAAACCTCTACAAGTACATC 59.631 42.308 0.00 0.00 37.80 3.06
383 2890 6.919775 AGTGAAACCTCTACAAGTACATCT 57.080 37.500 0.00 0.00 37.80 2.90
384 2891 8.304596 CAAGTGAAACCTCTACAAGTACATCTA 58.695 37.037 0.00 0.00 37.80 1.98
385 2892 8.057536 AGTGAAACCTCTACAAGTACATCTAG 57.942 38.462 0.00 0.00 37.80 2.43
386 2893 6.752815 GTGAAACCTCTACAAGTACATCTAGC 59.247 42.308 0.00 0.00 0.00 3.42
387 2894 5.502153 AACCTCTACAAGTACATCTAGCG 57.498 43.478 0.00 0.00 0.00 4.26
393 2900 7.387122 CCTCTACAAGTACATCTAGCGTACATA 59.613 40.741 18.74 10.43 41.40 2.29
406 2913 2.798283 GCGTACATATACACGGCATTGT 59.202 45.455 9.53 0.00 38.57 2.71
424 2931 5.569413 CATTGTAATGCTCGTACCTTTTCC 58.431 41.667 0.00 0.00 0.00 3.13
425 2932 3.255725 TGTAATGCTCGTACCTTTTCCG 58.744 45.455 0.00 0.00 0.00 4.30
426 2933 2.467566 AATGCTCGTACCTTTTCCGT 57.532 45.000 0.00 0.00 0.00 4.69
427 2934 1.722011 ATGCTCGTACCTTTTCCGTG 58.278 50.000 0.00 0.00 0.00 4.94
457 2964 2.106566 ACTCATGCAACACCCACAAAA 58.893 42.857 0.00 0.00 0.00 2.44
458 2965 2.101249 ACTCATGCAACACCCACAAAAG 59.899 45.455 0.00 0.00 0.00 2.27
459 2966 2.101249 CTCATGCAACACCCACAAAAGT 59.899 45.455 0.00 0.00 0.00 2.66
461 2968 3.701542 TCATGCAACACCCACAAAAGTTA 59.298 39.130 0.00 0.00 0.00 2.24
464 2988 3.764434 TGCAACACCCACAAAAGTTAAGA 59.236 39.130 0.00 0.00 0.00 2.10
486 3010 3.056313 GCTGCGTGGCCTGAAATCC 62.056 63.158 3.32 0.00 0.00 3.01
489 3013 2.436646 CGTGGCCTGAAATCCGCT 60.437 61.111 3.32 0.00 0.00 5.52
490 3014 2.040544 CGTGGCCTGAAATCCGCTT 61.041 57.895 3.32 0.00 0.00 4.68
492 3016 1.678635 TGGCCTGAAATCCGCTTGG 60.679 57.895 3.32 0.00 0.00 3.61
493 3017 2.491621 GCCTGAAATCCGCTTGGC 59.508 61.111 0.00 0.00 0.00 4.52
504 3028 4.201951 GCTTGGCGATCTTCCGAA 57.798 55.556 0.00 0.00 0.00 4.30
505 3029 2.466867 GCTTGGCGATCTTCCGAAA 58.533 52.632 0.00 0.00 0.00 3.46
506 3030 0.375106 GCTTGGCGATCTTCCGAAAG 59.625 55.000 0.00 0.00 0.00 2.62
507 3031 0.375106 CTTGGCGATCTTCCGAAAGC 59.625 55.000 0.00 0.00 32.18 3.51
508 3032 0.036388 TTGGCGATCTTCCGAAAGCT 60.036 50.000 0.00 0.00 32.18 3.74
509 3033 0.821517 TGGCGATCTTCCGAAAGCTA 59.178 50.000 0.00 0.00 32.18 3.32
510 3034 1.209998 GGCGATCTTCCGAAAGCTAC 58.790 55.000 0.00 0.00 32.18 3.58
511 3035 1.470979 GGCGATCTTCCGAAAGCTACA 60.471 52.381 0.00 0.00 32.18 2.74
512 3036 2.474816 GCGATCTTCCGAAAGCTACAT 58.525 47.619 0.00 0.00 32.18 2.29
513 3037 2.473235 GCGATCTTCCGAAAGCTACATC 59.527 50.000 0.00 0.00 32.18 3.06
514 3038 3.706698 CGATCTTCCGAAAGCTACATCA 58.293 45.455 0.00 0.00 32.18 3.07
515 3039 3.487574 CGATCTTCCGAAAGCTACATCAC 59.512 47.826 0.00 0.00 32.18 3.06
516 3040 4.688021 GATCTTCCGAAAGCTACATCACT 58.312 43.478 0.00 0.00 32.18 3.41
517 3041 4.111375 TCTTCCGAAAGCTACATCACTC 57.889 45.455 0.00 0.00 32.18 3.51
518 3042 3.509967 TCTTCCGAAAGCTACATCACTCA 59.490 43.478 0.00 0.00 32.18 3.41
519 3043 3.953712 TCCGAAAGCTACATCACTCAA 57.046 42.857 0.00 0.00 0.00 3.02
520 3044 4.265904 TCCGAAAGCTACATCACTCAAA 57.734 40.909 0.00 0.00 0.00 2.69
521 3045 4.637276 TCCGAAAGCTACATCACTCAAAA 58.363 39.130 0.00 0.00 0.00 2.44
533 3057 2.094700 TCACTCAAAATCCGACGAGAGG 60.095 50.000 0.00 0.00 0.00 3.69
534 3058 1.893801 ACTCAAAATCCGACGAGAGGT 59.106 47.619 0.00 0.00 0.00 3.85
535 3059 2.299297 ACTCAAAATCCGACGAGAGGTT 59.701 45.455 0.00 0.00 0.00 3.50
536 3060 2.668457 CTCAAAATCCGACGAGAGGTTG 59.332 50.000 0.00 1.65 0.00 3.77
541 3065 1.807886 CCGACGAGAGGTTGGTAGG 59.192 63.158 0.00 0.00 44.19 3.18
542 3066 0.964358 CCGACGAGAGGTTGGTAGGT 60.964 60.000 0.00 0.00 44.19 3.08
544 3068 2.295885 CGACGAGAGGTTGGTAGGTAT 58.704 52.381 0.00 0.00 0.00 2.73
545 3069 3.470709 CGACGAGAGGTTGGTAGGTATA 58.529 50.000 0.00 0.00 0.00 1.47
547 3071 3.209410 ACGAGAGGTTGGTAGGTATACG 58.791 50.000 0.00 0.00 32.24 3.06
548 3072 3.118261 ACGAGAGGTTGGTAGGTATACGA 60.118 47.826 0.00 0.00 32.24 3.43
549 3073 4.070716 CGAGAGGTTGGTAGGTATACGAT 58.929 47.826 0.00 0.00 32.24 3.73
553 3077 2.035066 GGTTGGTAGGTATACGATGCGT 59.965 50.000 0.00 0.00 44.35 5.24
555 3079 2.300433 TGGTAGGTATACGATGCGTGT 58.700 47.619 2.33 0.00 41.39 4.49
556 3080 2.033675 TGGTAGGTATACGATGCGTGTG 59.966 50.000 2.33 0.00 41.39 3.82
557 3081 2.291465 GGTAGGTATACGATGCGTGTGA 59.709 50.000 2.33 0.00 41.39 3.58
559 3083 2.294979 AGGTATACGATGCGTGTGAGA 58.705 47.619 2.33 0.00 41.39 3.27
573 3139 2.124570 GAGACGGGCCACATGCAT 60.125 61.111 4.39 0.00 43.89 3.96
574 3140 1.750399 GAGACGGGCCACATGCATT 60.750 57.895 4.39 0.00 43.89 3.56
575 3141 1.996786 GAGACGGGCCACATGCATTG 61.997 60.000 4.39 0.00 43.89 2.82
582 3148 3.627645 CCACATGCATTGGCCAAAA 57.372 47.368 24.71 11.92 40.13 2.44
583 3149 2.116827 CCACATGCATTGGCCAAAAT 57.883 45.000 24.71 13.81 40.13 1.82
585 3151 1.661617 CACATGCATTGGCCAAAATCG 59.338 47.619 24.71 12.47 40.13 3.34
586 3152 1.292061 CATGCATTGGCCAAAATCGG 58.708 50.000 24.71 10.88 40.13 4.18
588 3154 0.246086 TGCATTGGCCAAAATCGGAC 59.754 50.000 24.71 7.45 40.13 4.79
589 3155 0.532115 GCATTGGCCAAAATCGGACT 59.468 50.000 24.71 0.00 33.86 3.85
591 3157 1.135024 CATTGGCCAAAATCGGACTGG 60.135 52.381 24.71 0.00 33.86 4.00
594 3160 4.743018 CCAAAATCGGACTGGCCT 57.257 55.556 3.32 0.00 0.00 5.19
595 3161 2.183409 CCAAAATCGGACTGGCCTG 58.817 57.895 8.29 8.29 0.00 4.85
598 3164 2.424842 AAAATCGGACTGGCCTGGCA 62.425 55.000 22.05 3.71 0.00 4.92
599 3165 3.628646 AATCGGACTGGCCTGGCAC 62.629 63.158 22.05 10.55 0.00 5.01
613 3179 3.959975 GCACGCGTTGGCCAAGAA 61.960 61.111 21.21 0.00 35.02 2.52
614 3180 2.051345 CACGCGTTGGCCAAGAAC 60.051 61.111 21.21 7.29 35.02 3.01
615 3181 3.284449 ACGCGTTGGCCAAGAACC 61.284 61.111 21.21 6.02 35.02 3.62
616 3182 3.283684 CGCGTTGGCCAAGAACCA 61.284 61.111 21.21 0.00 35.02 3.67
617 3183 2.840066 CGCGTTGGCCAAGAACCAA 61.840 57.895 21.21 0.00 44.86 3.67
627 3417 5.329399 TGGCCAAGAACCAAAATATGTAGT 58.671 37.500 0.61 0.00 33.12 2.73
628 3418 5.777732 TGGCCAAGAACCAAAATATGTAGTT 59.222 36.000 0.61 0.00 33.12 2.24
723 5527 5.365619 AGTGTATTATGGTCCATTTCCGAC 58.634 41.667 10.33 2.58 0.00 4.79
734 5538 0.806102 ATTTCCGACGACATGGAGCG 60.806 55.000 0.00 0.04 35.26 5.03
735 5539 2.829043 TTTCCGACGACATGGAGCGG 62.829 60.000 10.93 10.93 43.11 5.52
766 5570 8.496707 AGAATTGTTTTTGTTTCAAATCAGCT 57.503 26.923 0.00 0.00 0.00 4.24
767 5571 9.598517 AGAATTGTTTTTGTTTCAAATCAGCTA 57.401 25.926 0.00 0.00 0.00 3.32
789 5593 6.197096 GCTAATTAACCTGACATGCGAAAATG 59.803 38.462 0.00 0.00 0.00 2.32
790 5594 2.352503 AACCTGACATGCGAAAATGC 57.647 45.000 0.00 0.00 0.00 3.56
801 5605 3.525537 TGCGAAAATGCAAGGAAAACAA 58.474 36.364 0.00 0.00 43.02 2.83
807 5611 4.339872 AATGCAAGGAAAACAATGAGCA 57.660 36.364 0.00 0.00 35.03 4.26
819 5623 4.357918 ACAATGAGCACTAGTGACCTTT 57.642 40.909 27.08 16.14 0.00 3.11
835 5639 8.691661 AGTGACCTTTGTTTGTGAGTATAAAT 57.308 30.769 0.00 0.00 0.00 1.40
886 5690 1.069432 CACCGAAGCATGCATATGAGC 60.069 52.381 21.98 7.00 36.36 4.26
900 5704 7.908827 TGCATATGAGCAAAATGAAAAATGT 57.091 28.000 6.97 0.00 42.46 2.71
901 5705 8.999220 TGCATATGAGCAAAATGAAAAATGTA 57.001 26.923 6.97 0.00 42.46 2.29
902 5706 9.433153 TGCATATGAGCAAAATGAAAAATGTAA 57.567 25.926 6.97 0.00 42.46 2.41
903 5707 9.910511 GCATATGAGCAAAATGAAAAATGTAAG 57.089 29.630 6.97 0.00 0.00 2.34
932 5736 1.210967 CCTTTATACCAGGCCAACCGA 59.789 52.381 5.01 0.00 42.76 4.69
982 5786 5.217400 TCTTCCCTCCTATAAAACCTCCTC 58.783 45.833 0.00 0.00 0.00 3.71
1030 5834 1.903404 CTCTGCCCACCCAACAACC 60.903 63.158 0.00 0.00 0.00 3.77
1031 5835 2.123511 CTGCCCACCCAACAACCA 60.124 61.111 0.00 0.00 0.00 3.67
1166 5972 4.735132 GCGCTGCTACGGGTGACA 62.735 66.667 0.00 0.00 0.00 3.58
1169 5975 2.656646 CTGCTACGGGTGACAGCA 59.343 61.111 7.01 0.00 42.77 4.41
1170 5976 1.219124 CTGCTACGGGTGACAGCAT 59.781 57.895 7.01 0.00 43.88 3.79
1306 6115 2.062777 GGAGGAGTACGGGTTCCCC 61.063 68.421 1.93 0.00 41.09 4.81
1448 6275 4.704833 GGCCGTTGCTGCAGAGGA 62.705 66.667 20.43 0.00 37.74 3.71
1488 6315 1.294138 GGTGACCGGTCGATGGAAA 59.706 57.895 28.70 7.30 0.00 3.13
1561 6396 2.508439 GCGATTTGACTCCGGCGA 60.508 61.111 9.30 0.00 0.00 5.54
1583 6433 2.749044 AGCCGTGGCATCAGCAAG 60.749 61.111 14.29 0.00 44.61 4.01
1624 6481 3.398920 CGAAATCATGTCGCCGCT 58.601 55.556 0.00 0.00 0.00 5.52
1845 6740 8.034804 TGATTAGTTCAAGATGAAGATGACGAA 58.965 33.333 0.00 0.00 37.00 3.85
1927 6891 2.949177 TGGGTGTCATTAGCTGTTGT 57.051 45.000 0.00 0.00 0.00 3.32
1952 6924 7.617041 ATTATCTGTTTTGCTAACTCTCCAC 57.383 36.000 4.36 0.00 0.00 4.02
1956 6928 3.244422 TGTTTTGCTAACTCTCCACCGAT 60.244 43.478 4.36 0.00 0.00 4.18
1990 6962 9.624697 TTTCTTATTAATGTGCAAGATTCACAC 57.375 29.630 0.00 0.00 45.83 3.82
1998 6970 6.741992 TGTGCAAGATTCACACCTTTATAG 57.258 37.500 0.00 0.00 39.29 1.31
2015 6987 6.207614 CCTTTATAGACTCCGAGATCACATGA 59.792 42.308 0.00 0.00 0.00 3.07
2016 6988 6.561737 TTATAGACTCCGAGATCACATGAC 57.438 41.667 0.00 0.00 0.00 3.06
2027 6999 5.041191 AGATCACATGACAAGGATAACCC 57.959 43.478 0.00 0.00 36.73 4.11
2041 7013 1.266160 TAACCCCGGCCGAGATCAAA 61.266 55.000 30.73 2.16 0.00 2.69
2089 7061 2.597578 AAAAGGATAACACCGCCCTT 57.402 45.000 0.00 0.00 40.46 3.95
2090 7062 2.597578 AAAGGATAACACCGCCCTTT 57.402 45.000 0.00 0.00 42.37 3.11
2091 7063 1.834188 AAGGATAACACCGCCCTTTG 58.166 50.000 0.00 0.00 35.64 2.77
2092 7064 0.679960 AGGATAACACCGCCCTTTGC 60.680 55.000 0.00 0.00 34.73 3.68
2093 7065 0.963355 GGATAACACCGCCCTTTGCA 60.963 55.000 0.00 0.00 41.33 4.08
2094 7066 0.885196 GATAACACCGCCCTTTGCAA 59.115 50.000 0.00 0.00 41.33 4.08
2095 7067 0.601057 ATAACACCGCCCTTTGCAAC 59.399 50.000 0.00 0.00 41.33 4.17
2096 7068 1.787057 TAACACCGCCCTTTGCAACG 61.787 55.000 0.00 0.00 41.33 4.10
2098 7070 2.978010 ACCGCCCTTTGCAACGAG 60.978 61.111 4.19 0.00 41.33 4.18
2146 7118 3.891324 TGTTTTGTTTTATCTTCGCGGG 58.109 40.909 6.13 0.00 0.00 6.13
2148 7120 4.036498 TGTTTTGTTTTATCTTCGCGGGAA 59.964 37.500 14.71 14.71 0.00 3.97
2149 7121 4.832590 TTTGTTTTATCTTCGCGGGAAA 57.167 36.364 16.24 7.80 0.00 3.13
2150 7122 4.832590 TTGTTTTATCTTCGCGGGAAAA 57.167 36.364 16.24 3.13 0.00 2.29
2181 7153 7.065923 CGATCTATTCATCTTCAATCATGGCAT 59.934 37.037 0.00 0.00 0.00 4.40
2187 7159 1.655885 TTCAATCATGGCATGCGCGT 61.656 50.000 22.56 0.00 39.92 6.01
2189 7161 3.172099 AATCATGGCATGCGCGTCG 62.172 57.895 22.56 0.00 39.92 5.12
2209 7181 1.753078 CGTCATCGTCCCTCCCTCA 60.753 63.158 0.00 0.00 0.00 3.86
2210 7182 1.817209 GTCATCGTCCCTCCCTCAC 59.183 63.158 0.00 0.00 0.00 3.51
2211 7183 1.381327 TCATCGTCCCTCCCTCACC 60.381 63.158 0.00 0.00 0.00 4.02
2232 7205 1.040339 AGCCGGGCAAAACTTGTTGA 61.040 50.000 23.09 0.00 0.00 3.18
2237 7210 3.181485 CCGGGCAAAACTTGTTGAAGTAA 60.181 43.478 0.00 0.00 41.87 2.24
2239 7212 4.865365 CGGGCAAAACTTGTTGAAGTAAAA 59.135 37.500 0.00 0.00 41.87 1.52
2253 7226 4.035909 TGAAGTAAAAAGTTGGGAAGTCGC 59.964 41.667 0.00 0.00 0.00 5.19
2288 7261 0.902531 TAGGGCCAGCACACTAGAAC 59.097 55.000 6.18 0.00 0.00 3.01
2290 7263 0.250727 GGGCCAGCACACTAGAACAA 60.251 55.000 4.39 0.00 0.00 2.83
2300 7273 2.066262 CACTAGAACAACAATCGCCGT 58.934 47.619 0.00 0.00 0.00 5.68
2301 7274 2.478894 CACTAGAACAACAATCGCCGTT 59.521 45.455 0.00 0.00 0.00 4.44
2305 7278 2.095768 AGAACAACAATCGCCGTTGATG 60.096 45.455 15.38 9.84 45.30 3.07
2317 7290 2.479049 GCCGTTGATGAAGAGTAGCGTA 60.479 50.000 0.00 0.00 0.00 4.42
2323 7296 4.377897 TGATGAAGAGTAGCGTAGATCGA 58.622 43.478 0.00 0.00 42.86 3.59
2345 7318 4.916041 AAGGATCCAATCTGAAGACACA 57.084 40.909 15.82 0.00 0.00 3.72
2346 7319 4.213564 AGGATCCAATCTGAAGACACAC 57.786 45.455 15.82 0.00 0.00 3.82
2347 7320 2.932614 GGATCCAATCTGAAGACACACG 59.067 50.000 6.95 0.00 0.00 4.49
2348 7321 3.368427 GGATCCAATCTGAAGACACACGA 60.368 47.826 6.95 0.00 0.00 4.35
2349 7322 3.744238 TCCAATCTGAAGACACACGAA 57.256 42.857 0.00 0.00 0.00 3.85
2350 7323 4.271696 TCCAATCTGAAGACACACGAAT 57.728 40.909 0.00 0.00 0.00 3.34
2351 7324 3.996363 TCCAATCTGAAGACACACGAATG 59.004 43.478 0.00 0.00 0.00 2.67
2352 7325 3.996363 CCAATCTGAAGACACACGAATGA 59.004 43.478 0.00 0.00 0.00 2.57
2353 7326 4.452114 CCAATCTGAAGACACACGAATGAA 59.548 41.667 0.00 0.00 0.00 2.57
2354 7327 5.390251 CCAATCTGAAGACACACGAATGAAG 60.390 44.000 0.00 0.00 0.00 3.02
2366 7339 3.547868 CACGAATGAAGACGAACGATGAT 59.452 43.478 0.14 0.00 0.00 2.45
2377 7350 2.223805 CGAACGATGATCAGATCCACCA 60.224 50.000 8.00 0.00 0.00 4.17
2378 7351 3.737972 CGAACGATGATCAGATCCACCAA 60.738 47.826 8.00 0.00 0.00 3.67
2379 7352 3.185246 ACGATGATCAGATCCACCAAC 57.815 47.619 8.00 0.00 0.00 3.77
2380 7353 2.130395 CGATGATCAGATCCACCAACG 58.870 52.381 8.00 0.00 0.00 4.10
2381 7354 2.223805 CGATGATCAGATCCACCAACGA 60.224 50.000 8.00 0.00 0.00 3.85
2382 7355 2.672961 TGATCAGATCCACCAACGAC 57.327 50.000 8.00 0.00 0.00 4.34
2383 7356 1.899142 TGATCAGATCCACCAACGACA 59.101 47.619 8.00 0.00 0.00 4.35
2384 7357 2.094026 TGATCAGATCCACCAACGACAG 60.094 50.000 8.00 0.00 0.00 3.51
2385 7358 1.627864 TCAGATCCACCAACGACAGA 58.372 50.000 0.00 0.00 0.00 3.41
2386 7359 2.179427 TCAGATCCACCAACGACAGAT 58.821 47.619 0.00 0.00 0.00 2.90
2387 7360 2.166459 TCAGATCCACCAACGACAGATC 59.834 50.000 0.00 0.00 34.79 2.75
2388 7361 1.482593 AGATCCACCAACGACAGATCC 59.517 52.381 0.00 0.00 35.08 3.36
2389 7362 1.207089 GATCCACCAACGACAGATCCA 59.793 52.381 0.00 0.00 0.00 3.41
2390 7363 1.275666 TCCACCAACGACAGATCCAT 58.724 50.000 0.00 0.00 0.00 3.41
2391 7364 1.207089 TCCACCAACGACAGATCCATC 59.793 52.381 0.00 0.00 0.00 3.51
2400 7373 1.751351 GACAGATCCATCGGAGACACA 59.249 52.381 0.00 0.00 42.51 3.72
2404 7377 1.067821 GATCCATCGGAGACACACCTC 59.932 57.143 0.00 0.00 42.51 3.85
2416 7389 2.264794 CACCTCCACACGCCTACC 59.735 66.667 0.00 0.00 0.00 3.18
2428 7401 0.039437 CGCCTACCGACGATGCTATT 60.039 55.000 0.00 0.00 40.02 1.73
2429 7402 1.699343 GCCTACCGACGATGCTATTC 58.301 55.000 0.00 0.00 0.00 1.75
2430 7403 1.269998 GCCTACCGACGATGCTATTCT 59.730 52.381 0.00 0.00 0.00 2.40
2441 7414 2.238942 TGCTATTCTATGCACCACCG 57.761 50.000 0.00 0.00 33.94 4.94
2444 7417 2.484770 GCTATTCTATGCACCACCGGAA 60.485 50.000 9.46 0.00 0.00 4.30
2445 7418 2.038387 ATTCTATGCACCACCGGAAC 57.962 50.000 9.46 0.00 0.00 3.62
2459 7432 4.176752 GAACGGGGGCTAGGCAGG 62.177 72.222 19.14 8.66 0.00 4.85
2460 7433 4.733725 AACGGGGGCTAGGCAGGA 62.734 66.667 19.14 0.00 0.00 3.86
2462 7435 3.866582 CGGGGGCTAGGCAGGAAG 61.867 72.222 19.14 0.52 0.00 3.46
2466 7439 2.747443 GGGCTAGGCAGGAAGGACC 61.747 68.421 19.14 0.00 39.35 4.46
2486 7459 3.137360 ACCTTATTCCATCTTCAGGGAGC 59.863 47.826 0.00 0.00 34.02 4.70
2487 7460 3.393941 CCTTATTCCATCTTCAGGGAGCT 59.606 47.826 0.00 0.00 34.02 4.09
2488 7461 4.387598 CTTATTCCATCTTCAGGGAGCTG 58.612 47.826 0.00 0.00 34.02 4.24
2491 7464 1.605992 CATCTTCAGGGAGCTGCCA 59.394 57.895 27.56 5.20 38.95 4.92
2504 7477 2.357034 TGCCACCGTCTCGCTTTC 60.357 61.111 0.00 0.00 0.00 2.62
2507 7480 1.738099 CCACCGTCTCGCTTTCCTG 60.738 63.158 0.00 0.00 0.00 3.86
2514 7487 0.897621 TCTCGCTTTCCTGAGCATGA 59.102 50.000 0.00 0.00 42.83 3.07
2518 7491 1.527034 GCTTTCCTGAGCATGACACA 58.473 50.000 0.00 0.00 42.25 3.72
2520 7493 2.294233 GCTTTCCTGAGCATGACACAAA 59.706 45.455 0.00 0.00 42.25 2.83
2529 7503 3.731089 AGCATGACACAAACCCAAAATG 58.269 40.909 0.00 0.00 0.00 2.32
2535 7509 6.042638 TGACACAAACCCAAAATGAAAGAA 57.957 33.333 0.00 0.00 0.00 2.52
2555 7529 4.019231 AGAAAGATCTAAAAACGGAGCCCT 60.019 41.667 0.00 0.00 32.88 5.19
2558 7532 0.616891 TCTAAAAACGGAGCCCTCCC 59.383 55.000 8.68 0.00 46.96 4.30
2569 7543 3.382832 CCCTCCCGCGACAAGAGT 61.383 66.667 8.23 0.00 0.00 3.24
2580 7554 0.175989 GACAAGAGTCGGGATCCACC 59.824 60.000 15.23 0.00 34.60 4.61
2616 7590 4.459089 GGCCACTGGAGACGAGGC 62.459 72.222 0.00 0.00 38.87 4.70
2621 7595 4.180946 CTGGAGACGAGGCGGACG 62.181 72.222 0.00 0.00 0.00 4.79
2663 7637 3.618997 CGCAGAGGAACCCTAAGCTTTTA 60.619 47.826 3.20 0.00 31.76 1.52
2667 7641 4.850386 AGAGGAACCCTAAGCTTTTAAGGA 59.150 41.667 14.31 0.00 31.76 3.36
2676 7650 4.835284 AAGCTTTTAAGGAGAGAGGAGG 57.165 45.455 0.00 0.00 0.00 4.30
2678 7652 2.740256 GCTTTTAAGGAGAGAGGAGGCG 60.740 54.545 0.00 0.00 0.00 5.52
2680 7654 0.335361 TTAAGGAGAGAGGAGGCGGT 59.665 55.000 0.00 0.00 0.00 5.68
2757 7740 9.868277 GAACCAACAAAACAAATATATGGATCA 57.132 29.630 0.00 0.00 31.23 2.92
2759 7742 9.651913 ACCAACAAAACAAATATATGGATCAAC 57.348 29.630 0.00 0.00 0.00 3.18
2760 7743 9.097257 CCAACAAAACAAATATATGGATCAACC 57.903 33.333 0.00 0.00 39.54 3.77
2761 7744 9.097257 CAACAAAACAAATATATGGATCAACCC 57.903 33.333 0.00 0.00 38.00 4.11
2762 7745 7.488322 ACAAAACAAATATATGGATCAACCCG 58.512 34.615 0.00 0.00 38.00 5.28
2763 7746 7.340743 ACAAAACAAATATATGGATCAACCCGA 59.659 33.333 0.00 0.00 38.00 5.14
2764 7747 7.889873 AAACAAATATATGGATCAACCCGAA 57.110 32.000 0.00 0.00 38.00 4.30
2765 7748 7.889873 AACAAATATATGGATCAACCCGAAA 57.110 32.000 0.00 0.00 38.00 3.46
2766 7749 7.510549 ACAAATATATGGATCAACCCGAAAG 57.489 36.000 0.00 0.00 38.00 2.62
2767 7750 6.016276 ACAAATATATGGATCAACCCGAAAGC 60.016 38.462 0.00 0.00 38.00 3.51
2768 7751 2.341846 TATGGATCAACCCGAAAGCC 57.658 50.000 0.00 0.00 38.00 4.35
2769 7752 0.748005 ATGGATCAACCCGAAAGCCG 60.748 55.000 0.00 0.00 38.00 5.52
2770 7753 1.376812 GGATCAACCCGAAAGCCGT 60.377 57.895 0.00 0.00 36.31 5.68
2771 7754 1.366854 GGATCAACCCGAAAGCCGTC 61.367 60.000 0.00 0.00 36.31 4.79
2772 7755 0.391263 GATCAACCCGAAAGCCGTCT 60.391 55.000 0.00 0.00 36.31 4.18
2773 7756 0.036306 ATCAACCCGAAAGCCGTCTT 59.964 50.000 0.00 0.00 36.31 3.01
2774 7757 0.179040 TCAACCCGAAAGCCGTCTTT 60.179 50.000 0.00 0.00 44.67 2.52
2786 7769 2.457366 CCGTCTTTCTGGCAACTACT 57.543 50.000 0.00 0.00 37.61 2.57
2787 7770 2.069273 CCGTCTTTCTGGCAACTACTG 58.931 52.381 0.00 0.00 37.61 2.74
2788 7771 2.548067 CCGTCTTTCTGGCAACTACTGT 60.548 50.000 0.00 0.00 37.61 3.55
2789 7772 2.476619 CGTCTTTCTGGCAACTACTGTG 59.523 50.000 0.00 0.00 37.61 3.66
2790 7773 2.808543 GTCTTTCTGGCAACTACTGTGG 59.191 50.000 0.00 0.00 37.61 4.17
2791 7774 1.537202 CTTTCTGGCAACTACTGTGGC 59.463 52.381 0.00 0.00 42.28 5.01
2792 7775 0.764890 TTCTGGCAACTACTGTGGCT 59.235 50.000 0.00 0.00 42.60 4.75
2793 7776 1.639722 TCTGGCAACTACTGTGGCTA 58.360 50.000 0.00 0.00 42.60 3.93
2794 7777 2.187958 TCTGGCAACTACTGTGGCTAT 58.812 47.619 0.00 0.00 42.60 2.97
2795 7778 3.371034 TCTGGCAACTACTGTGGCTATA 58.629 45.455 0.00 0.00 42.60 1.31
2796 7779 3.132289 TCTGGCAACTACTGTGGCTATAC 59.868 47.826 0.00 0.00 42.60 1.47
2797 7780 2.169769 TGGCAACTACTGTGGCTATACC 59.830 50.000 0.00 0.00 42.60 2.73
2798 7781 2.434702 GGCAACTACTGTGGCTATACCT 59.565 50.000 0.00 0.00 42.60 3.08
2799 7782 3.640029 GGCAACTACTGTGGCTATACCTA 59.360 47.826 0.00 0.00 42.60 3.08
2800 7783 4.501058 GGCAACTACTGTGGCTATACCTAC 60.501 50.000 0.00 0.00 42.60 3.18
2801 7784 4.098960 GCAACTACTGTGGCTATACCTACA 59.901 45.833 0.00 0.00 39.94 2.74
2802 7785 5.736492 GCAACTACTGTGGCTATACCTACAG 60.736 48.000 9.37 9.37 45.53 2.74
2806 7789 4.576216 CTGTGGCTATACCTACAGTCTG 57.424 50.000 0.00 0.00 40.16 3.51
2807 7790 4.207955 CTGTGGCTATACCTACAGTCTGA 58.792 47.826 6.91 0.00 40.16 3.27
2808 7791 4.606210 TGTGGCTATACCTACAGTCTGAA 58.394 43.478 6.91 0.00 40.22 3.02
2809 7792 5.208890 TGTGGCTATACCTACAGTCTGAAT 58.791 41.667 6.91 0.00 40.22 2.57
2810 7793 5.069119 TGTGGCTATACCTACAGTCTGAATG 59.931 44.000 6.91 3.21 40.22 2.67
2811 7794 5.302059 GTGGCTATACCTACAGTCTGAATGA 59.698 44.000 12.54 0.00 40.22 2.57
2812 7795 6.015010 GTGGCTATACCTACAGTCTGAATGAT 60.015 42.308 12.54 0.00 40.22 2.45
2813 7796 6.015095 TGGCTATACCTACAGTCTGAATGATG 60.015 42.308 12.54 3.92 40.22 3.07
2814 7797 6.015010 GGCTATACCTACAGTCTGAATGATGT 60.015 42.308 12.54 7.90 34.51 3.06
2815 7798 6.865726 GCTATACCTACAGTCTGAATGATGTG 59.134 42.308 12.54 0.32 0.00 3.21
2816 7799 6.798427 ATACCTACAGTCTGAATGATGTGT 57.202 37.500 12.54 5.96 0.00 3.72
2817 7800 5.078411 ACCTACAGTCTGAATGATGTGTC 57.922 43.478 12.54 0.00 0.00 3.67
2818 7801 4.081420 ACCTACAGTCTGAATGATGTGTCC 60.081 45.833 12.54 0.00 0.00 4.02
2819 7802 4.161189 CCTACAGTCTGAATGATGTGTCCT 59.839 45.833 12.54 0.00 0.00 3.85
2820 7803 3.935315 ACAGTCTGAATGATGTGTCCTG 58.065 45.455 12.54 0.00 0.00 3.86
2821 7804 3.580022 ACAGTCTGAATGATGTGTCCTGA 59.420 43.478 12.54 0.00 0.00 3.86
2822 7805 3.931468 CAGTCTGAATGATGTGTCCTGAC 59.069 47.826 0.00 0.00 0.00 3.51
2823 7806 3.055530 AGTCTGAATGATGTGTCCTGACC 60.056 47.826 0.00 0.00 0.00 4.02
2824 7807 3.055530 GTCTGAATGATGTGTCCTGACCT 60.056 47.826 0.00 0.00 0.00 3.85
2825 7808 3.584406 TCTGAATGATGTGTCCTGACCTT 59.416 43.478 0.00 0.00 0.00 3.50
2826 7809 3.678289 TGAATGATGTGTCCTGACCTTG 58.322 45.455 0.00 0.00 0.00 3.61
2827 7810 2.119801 ATGATGTGTCCTGACCTTGC 57.880 50.000 0.00 0.00 0.00 4.01
2828 7811 0.764271 TGATGTGTCCTGACCTTGCA 59.236 50.000 0.00 0.00 0.00 4.08
2829 7812 1.352017 TGATGTGTCCTGACCTTGCAT 59.648 47.619 0.00 0.00 0.00 3.96
2830 7813 2.012673 GATGTGTCCTGACCTTGCATC 58.987 52.381 0.00 0.00 0.00 3.91
2831 7814 0.764271 TGTGTCCTGACCTTGCATCA 59.236 50.000 0.00 0.00 0.00 3.07
2832 7815 1.142667 TGTGTCCTGACCTTGCATCAA 59.857 47.619 0.00 0.00 0.00 2.57
2833 7816 2.224843 TGTGTCCTGACCTTGCATCAAT 60.225 45.455 0.00 0.00 0.00 2.57
2834 7817 3.008923 TGTGTCCTGACCTTGCATCAATA 59.991 43.478 0.00 0.00 0.00 1.90
2835 7818 3.375299 GTGTCCTGACCTTGCATCAATAC 59.625 47.826 0.00 0.00 0.00 1.89
2836 7819 3.008923 TGTCCTGACCTTGCATCAATACA 59.991 43.478 0.00 0.00 0.00 2.29
2837 7820 3.375299 GTCCTGACCTTGCATCAATACAC 59.625 47.826 0.00 0.00 0.00 2.90
2838 7821 3.008923 TCCTGACCTTGCATCAATACACA 59.991 43.478 0.00 0.00 0.00 3.72
2839 7822 3.127548 CCTGACCTTGCATCAATACACAC 59.872 47.826 0.00 0.00 0.00 3.82
2840 7823 3.081061 TGACCTTGCATCAATACACACC 58.919 45.455 0.00 0.00 0.00 4.16
2841 7824 3.081061 GACCTTGCATCAATACACACCA 58.919 45.455 0.00 0.00 0.00 4.17
2842 7825 3.696051 GACCTTGCATCAATACACACCAT 59.304 43.478 0.00 0.00 0.00 3.55
2843 7826 3.696051 ACCTTGCATCAATACACACCATC 59.304 43.478 0.00 0.00 0.00 3.51
2844 7827 3.949754 CCTTGCATCAATACACACCATCT 59.050 43.478 0.00 0.00 0.00 2.90
2845 7828 5.125356 CCTTGCATCAATACACACCATCTA 58.875 41.667 0.00 0.00 0.00 1.98
2846 7829 5.589855 CCTTGCATCAATACACACCATCTAA 59.410 40.000 0.00 0.00 0.00 2.10
2847 7830 6.263842 CCTTGCATCAATACACACCATCTAAT 59.736 38.462 0.00 0.00 0.00 1.73
2848 7831 7.445096 CCTTGCATCAATACACACCATCTAATA 59.555 37.037 0.00 0.00 0.00 0.98
2849 7832 7.967890 TGCATCAATACACACCATCTAATAG 57.032 36.000 0.00 0.00 0.00 1.73
2850 7833 6.936335 TGCATCAATACACACCATCTAATAGG 59.064 38.462 0.00 0.00 0.00 2.57
2851 7834 6.372659 GCATCAATACACACCATCTAATAGGG 59.627 42.308 0.00 0.00 34.25 3.53
2852 7835 7.453393 CATCAATACACACCATCTAATAGGGT 58.547 38.462 0.00 0.00 45.20 4.34
2859 7842 4.280789 ACCATCTAATAGGGTGGTCTCA 57.719 45.455 10.90 0.00 41.86 3.27
2860 7843 3.967987 ACCATCTAATAGGGTGGTCTCAC 59.032 47.826 10.90 0.00 41.86 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.393646 AGCTTTGCCTTTGGTTAACCA 58.606 42.857 23.69 23.69 45.94 3.67
24 25 3.181470 TGAAGCTTTGCCTTTGGTTAACC 60.181 43.478 18.27 18.27 0.00 2.85
25 26 4.053469 TGAAGCTTTGCCTTTGGTTAAC 57.947 40.909 0.00 0.00 0.00 2.01
26 27 4.343526 TGATGAAGCTTTGCCTTTGGTTAA 59.656 37.500 0.00 0.00 0.00 2.01
27 28 3.894427 TGATGAAGCTTTGCCTTTGGTTA 59.106 39.130 0.00 0.00 0.00 2.85
28 29 2.699846 TGATGAAGCTTTGCCTTTGGTT 59.300 40.909 0.00 0.00 0.00 3.67
29 30 2.036346 GTGATGAAGCTTTGCCTTTGGT 59.964 45.455 0.00 0.00 0.00 3.67
30 31 2.611224 GGTGATGAAGCTTTGCCTTTGG 60.611 50.000 0.00 0.00 0.00 3.28
31 32 2.680577 GGTGATGAAGCTTTGCCTTTG 58.319 47.619 0.00 0.00 0.00 2.77
32 33 1.270550 CGGTGATGAAGCTTTGCCTTT 59.729 47.619 0.00 0.00 0.00 3.11
33 34 0.883833 CGGTGATGAAGCTTTGCCTT 59.116 50.000 0.00 0.00 0.00 4.35
34 35 0.962356 CCGGTGATGAAGCTTTGCCT 60.962 55.000 0.00 0.00 0.00 4.75
35 36 1.508088 CCGGTGATGAAGCTTTGCC 59.492 57.895 0.00 0.00 0.00 4.52
36 37 1.153958 GCCGGTGATGAAGCTTTGC 60.154 57.895 1.90 0.00 0.00 3.68
37 38 1.135315 CGCCGGTGATGAAGCTTTG 59.865 57.895 10.20 0.00 0.00 2.77
38 39 2.040544 CCGCCGGTGATGAAGCTTT 61.041 57.895 18.79 0.00 0.00 3.51
39 40 2.436646 CCGCCGGTGATGAAGCTT 60.437 61.111 18.79 0.00 0.00 3.74
40 41 4.473520 CCCGCCGGTGATGAAGCT 62.474 66.667 18.79 0.00 0.00 3.74
41 42 3.757248 ATCCCGCCGGTGATGAAGC 62.757 63.158 18.79 0.00 0.00 3.86
42 43 1.889105 CATCCCGCCGGTGATGAAG 60.889 63.158 22.41 5.96 40.64 3.02
43 44 2.189257 CATCCCGCCGGTGATGAA 59.811 61.111 22.41 0.00 40.64 2.57
44 45 3.860605 CCATCCCGCCGGTGATGA 61.861 66.667 26.21 17.39 40.64 2.92
45 46 3.182590 ATCCATCCCGCCGGTGATG 62.183 63.158 18.79 20.85 38.45 3.07
46 47 2.849162 ATCCATCCCGCCGGTGAT 60.849 61.111 18.79 7.03 0.00 3.06
47 48 3.546543 GATCCATCCCGCCGGTGA 61.547 66.667 18.79 4.56 0.00 4.02
48 49 3.399105 TTGATCCATCCCGCCGGTG 62.399 63.158 8.42 8.42 0.00 4.94
49 50 3.087253 TTGATCCATCCCGCCGGT 61.087 61.111 1.90 0.00 0.00 5.28
50 51 2.281070 CTTGATCCATCCCGCCGG 60.281 66.667 0.00 0.00 0.00 6.13
51 52 1.595382 GTCTTGATCCATCCCGCCG 60.595 63.158 0.00 0.00 0.00 6.46
52 53 0.109342 ATGTCTTGATCCATCCCGCC 59.891 55.000 0.00 0.00 0.00 6.13
53 54 1.233019 CATGTCTTGATCCATCCCGC 58.767 55.000 0.00 0.00 0.00 6.13
54 55 2.627515 ACATGTCTTGATCCATCCCG 57.372 50.000 0.00 0.00 0.00 5.14
55 56 6.773638 AGTATTACATGTCTTGATCCATCCC 58.226 40.000 0.00 0.00 0.00 3.85
56 57 8.589338 AGTAGTATTACATGTCTTGATCCATCC 58.411 37.037 0.00 0.00 31.96 3.51
59 60 9.642343 AGTAGTAGTATTACATGTCTTGATCCA 57.358 33.333 0.00 0.00 31.96 3.41
89 90 7.334921 TGCAAGTTAGTAGTACAACTGTTGTTT 59.665 33.333 28.83 19.75 42.22 2.83
95 96 8.009974 GTCAATTGCAAGTTAGTAGTACAACTG 58.990 37.037 4.94 11.34 35.23 3.16
133 134 9.623000 TGATTACAAGCTAGTCATAGTAGTGTA 57.377 33.333 0.00 0.00 0.00 2.90
136 137 9.804758 GTTTGATTACAAGCTAGTCATAGTAGT 57.195 33.333 0.00 0.00 37.32 2.73
139 140 8.314751 ACAGTTTGATTACAAGCTAGTCATAGT 58.685 33.333 0.00 0.00 43.63 2.12
177 179 5.945466 AGTCGTAGCCTAGTAATAGAAGC 57.055 43.478 0.00 0.00 0.00 3.86
183 185 8.040132 CCACTACTATAGTCGTAGCCTAGTAAT 58.960 40.741 9.12 0.00 38.27 1.89
184 186 7.015682 ACCACTACTATAGTCGTAGCCTAGTAA 59.984 40.741 9.12 0.00 38.27 2.24
185 187 6.495181 ACCACTACTATAGTCGTAGCCTAGTA 59.505 42.308 9.12 0.00 38.27 1.82
188 190 5.815233 ACCACTACTATAGTCGTAGCCTA 57.185 43.478 9.12 0.00 38.27 3.93
196 198 4.275443 CCGAGGACAACCACTACTATAGTC 59.725 50.000 9.12 0.00 36.76 2.59
203 205 1.079336 GCCCGAGGACAACCACTAC 60.079 63.158 0.00 0.00 38.94 2.73
205 207 4.003788 CGCCCGAGGACAACCACT 62.004 66.667 0.00 0.00 38.94 4.00
209 211 2.029964 TTGTCGCCCGAGGACAAC 59.970 61.111 10.49 0.00 46.33 3.32
211 213 2.342279 CTTTGTCGCCCGAGGACA 59.658 61.111 0.00 0.01 42.31 4.02
213 215 2.879233 AAGCTTTGTCGCCCGAGGA 61.879 57.895 0.00 0.00 0.00 3.71
245 2752 2.604046 AGCTTATTAGGGTGAGCGTG 57.396 50.000 0.00 0.00 39.99 5.34
248 2755 3.612955 CGAGCTAGCTTATTAGGGTGAGC 60.613 52.174 20.42 0.00 35.42 4.26
257 2764 0.682292 GAGGCCCGAGCTAGCTTATT 59.318 55.000 20.42 0.00 39.73 1.40
258 2765 0.470080 TGAGGCCCGAGCTAGCTTAT 60.470 55.000 20.42 0.00 39.73 1.73
259 2766 0.686441 TTGAGGCCCGAGCTAGCTTA 60.686 55.000 20.42 0.00 39.73 3.09
260 2767 1.965754 CTTGAGGCCCGAGCTAGCTT 61.966 60.000 20.42 0.32 39.73 3.74
261 2768 2.364317 TTGAGGCCCGAGCTAGCT 60.364 61.111 19.45 19.45 39.73 3.32
262 2769 2.107953 CTTGAGGCCCGAGCTAGC 59.892 66.667 6.62 6.62 39.73 3.42
263 2770 2.107953 GCTTGAGGCCCGAGCTAG 59.892 66.667 20.47 7.60 46.58 3.42
267 2774 4.399395 TGCAGCTTGAGGCCCGAG 62.399 66.667 0.00 1.06 43.05 4.63
268 2775 4.704833 GTGCAGCTTGAGGCCCGA 62.705 66.667 0.00 0.00 43.05 5.14
270 2777 3.951769 ATGGTGCAGCTTGAGGCCC 62.952 63.158 18.08 0.00 43.05 5.80
271 2778 2.362120 ATGGTGCAGCTTGAGGCC 60.362 61.111 18.08 0.00 43.05 5.19
272 2779 2.882876 CATGGTGCAGCTTGAGGC 59.117 61.111 23.22 0.00 42.19 4.70
273 2780 2.882876 GCATGGTGCAGCTTGAGG 59.117 61.111 29.51 8.79 44.26 3.86
282 2789 1.068588 AGATGAATGCATGCATGGTGC 59.931 47.619 32.79 21.42 45.29 5.01
283 2790 3.057526 CCTAGATGAATGCATGCATGGTG 60.058 47.826 32.79 17.44 36.68 4.17
284 2791 3.154710 CCTAGATGAATGCATGCATGGT 58.845 45.455 32.79 19.13 36.68 3.55
285 2792 3.418047 TCCTAGATGAATGCATGCATGG 58.582 45.455 32.79 25.41 36.68 3.66
286 2793 4.700213 TCATCCTAGATGAATGCATGCATG 59.300 41.667 32.79 22.70 36.68 4.06
287 2794 4.918588 TCATCCTAGATGAATGCATGCAT 58.081 39.130 27.46 27.46 38.46 3.96
288 2795 4.360951 TCATCCTAGATGAATGCATGCA 57.639 40.909 25.04 25.04 34.11 3.96
289 2796 5.447413 CGAATCATCCTAGATGAATGCATGC 60.447 44.000 11.82 11.82 34.11 4.06
290 2797 5.642491 ACGAATCATCCTAGATGAATGCATG 59.358 40.000 11.06 0.00 34.11 4.06
291 2798 5.802465 ACGAATCATCCTAGATGAATGCAT 58.198 37.500 11.06 0.00 37.47 3.96
292 2799 5.219343 ACGAATCATCCTAGATGAATGCA 57.781 39.130 11.06 0.00 0.00 3.96
293 2800 7.168972 GCTATACGAATCATCCTAGATGAATGC 59.831 40.741 11.06 3.73 0.00 3.56
294 2801 8.412456 AGCTATACGAATCATCCTAGATGAATG 58.588 37.037 11.06 6.88 0.00 2.67
295 2802 8.532186 AGCTATACGAATCATCCTAGATGAAT 57.468 34.615 11.06 3.21 0.00 2.57
296 2803 7.946381 AGCTATACGAATCATCCTAGATGAA 57.054 36.000 11.06 0.00 0.00 2.57
297 2804 7.946381 AAGCTATACGAATCATCCTAGATGA 57.054 36.000 9.56 9.56 0.00 2.92
298 2805 8.867935 CAAAAGCTATACGAATCATCCTAGATG 58.132 37.037 0.00 0.00 0.00 2.90
299 2806 8.807118 TCAAAAGCTATACGAATCATCCTAGAT 58.193 33.333 0.00 0.00 0.00 1.98
300 2807 8.178313 TCAAAAGCTATACGAATCATCCTAGA 57.822 34.615 0.00 0.00 0.00 2.43
301 2808 7.543868 CCTCAAAAGCTATACGAATCATCCTAG 59.456 40.741 0.00 0.00 0.00 3.02
302 2809 7.232737 TCCTCAAAAGCTATACGAATCATCCTA 59.767 37.037 0.00 0.00 0.00 2.94
303 2810 6.042093 TCCTCAAAAGCTATACGAATCATCCT 59.958 38.462 0.00 0.00 0.00 3.24
304 2811 6.223852 TCCTCAAAAGCTATACGAATCATCC 58.776 40.000 0.00 0.00 0.00 3.51
305 2812 7.148641 TCTCCTCAAAAGCTATACGAATCATC 58.851 38.462 0.00 0.00 0.00 2.92
306 2813 7.055667 TCTCCTCAAAAGCTATACGAATCAT 57.944 36.000 0.00 0.00 0.00 2.45
307 2814 6.465439 TCTCCTCAAAAGCTATACGAATCA 57.535 37.500 0.00 0.00 0.00 2.57
308 2815 7.772332 TTTCTCCTCAAAAGCTATACGAATC 57.228 36.000 0.00 0.00 0.00 2.52
309 2816 7.606456 TGTTTTCTCCTCAAAAGCTATACGAAT 59.394 33.333 0.00 0.00 0.00 3.34
310 2817 6.932400 TGTTTTCTCCTCAAAAGCTATACGAA 59.068 34.615 0.00 0.00 0.00 3.85
311 2818 6.460781 TGTTTTCTCCTCAAAAGCTATACGA 58.539 36.000 0.00 0.00 0.00 3.43
312 2819 6.369065 ACTGTTTTCTCCTCAAAAGCTATACG 59.631 38.462 0.00 0.00 0.00 3.06
318 2825 4.639135 ACACTGTTTTCTCCTCAAAAGC 57.361 40.909 0.00 0.00 0.00 3.51
337 2844 1.671261 GCCATGGCGTTGCAATTAACA 60.671 47.619 23.48 0.12 0.00 2.41
345 2852 3.683937 ACTTGGCCATGGCGTTGC 61.684 61.111 29.90 16.73 43.06 4.17
356 2863 3.477530 ACTTGTAGAGGTTTCACTTGGC 58.522 45.455 0.00 0.00 0.00 4.52
362 2869 6.404403 CGCTAGATGTACTTGTAGAGGTTTCA 60.404 42.308 14.86 0.00 0.00 2.69
363 2870 5.972382 CGCTAGATGTACTTGTAGAGGTTTC 59.028 44.000 14.86 0.00 0.00 2.78
364 2871 5.418209 ACGCTAGATGTACTTGTAGAGGTTT 59.582 40.000 14.86 0.00 0.00 3.27
367 2874 5.526479 TGTACGCTAGATGTACTTGTAGAGG 59.474 44.000 19.97 9.02 42.09 3.69
371 2878 9.492973 TGTATATGTACGCTAGATGTACTTGTA 57.507 33.333 19.97 15.11 42.09 2.41
372 2879 8.288208 GTGTATATGTACGCTAGATGTACTTGT 58.712 37.037 19.97 15.80 42.09 3.16
373 2880 7.477733 CGTGTATATGTACGCTAGATGTACTTG 59.522 40.741 19.97 4.70 42.09 3.16
374 2881 7.360691 CCGTGTATATGTACGCTAGATGTACTT 60.361 40.741 19.97 17.07 42.09 2.24
375 2882 6.091849 CCGTGTATATGTACGCTAGATGTACT 59.908 42.308 19.97 11.82 42.09 2.73
376 2883 6.246449 CCGTGTATATGTACGCTAGATGTAC 58.754 44.000 15.17 15.17 41.97 2.90
377 2884 5.163824 GCCGTGTATATGTACGCTAGATGTA 60.164 44.000 10.86 0.00 38.80 2.29
378 2885 4.379186 GCCGTGTATATGTACGCTAGATGT 60.379 45.833 10.86 0.00 38.80 3.06
379 2886 4.096311 GCCGTGTATATGTACGCTAGATG 58.904 47.826 10.86 0.00 38.80 2.90
380 2887 3.754850 TGCCGTGTATATGTACGCTAGAT 59.245 43.478 10.86 0.00 38.80 1.98
381 2888 3.140623 TGCCGTGTATATGTACGCTAGA 58.859 45.455 10.86 0.00 38.80 2.43
382 2889 3.547649 TGCCGTGTATATGTACGCTAG 57.452 47.619 10.86 4.23 38.80 3.42
383 2890 4.231439 CAATGCCGTGTATATGTACGCTA 58.769 43.478 10.86 0.00 38.80 4.26
384 2891 3.057019 CAATGCCGTGTATATGTACGCT 58.943 45.455 10.86 0.00 38.80 5.07
385 2892 2.798283 ACAATGCCGTGTATATGTACGC 59.202 45.455 3.27 3.27 38.87 4.42
386 2893 6.521898 CATTACAATGCCGTGTATATGTACG 58.478 40.000 6.60 6.60 39.83 3.67
406 2913 3.056678 TCACGGAAAAGGTACGAGCATTA 60.057 43.478 0.00 0.00 0.00 1.90
422 2929 3.325870 CATGAGTGCTAGTTTTCACGGA 58.674 45.455 0.00 0.00 38.19 4.69
423 2930 3.729526 CATGAGTGCTAGTTTTCACGG 57.270 47.619 0.00 0.00 38.19 4.94
486 3010 1.358725 TTTCGGAAGATCGCCAAGCG 61.359 55.000 1.84 1.84 45.38 4.68
489 3013 0.036388 AGCTTTCGGAAGATCGCCAA 60.036 50.000 7.92 0.35 41.60 4.52
490 3014 0.821517 TAGCTTTCGGAAGATCGCCA 59.178 50.000 7.92 0.00 41.60 5.69
492 3016 1.922570 TGTAGCTTTCGGAAGATCGC 58.077 50.000 7.92 0.00 41.60 4.58
493 3017 3.487574 GTGATGTAGCTTTCGGAAGATCG 59.512 47.826 7.92 0.00 41.60 3.69
495 3019 4.160439 TGAGTGATGTAGCTTTCGGAAGAT 59.840 41.667 7.92 2.69 41.60 2.40
496 3020 3.509967 TGAGTGATGTAGCTTTCGGAAGA 59.490 43.478 7.92 0.00 34.71 2.87
497 3021 3.849911 TGAGTGATGTAGCTTTCGGAAG 58.150 45.455 0.00 0.00 35.92 3.46
501 3025 5.563842 GGATTTTGAGTGATGTAGCTTTCG 58.436 41.667 0.00 0.00 0.00 3.46
502 3026 5.351465 TCGGATTTTGAGTGATGTAGCTTTC 59.649 40.000 0.00 0.00 0.00 2.62
503 3027 5.122396 GTCGGATTTTGAGTGATGTAGCTTT 59.878 40.000 0.00 0.00 0.00 3.51
504 3028 4.631813 GTCGGATTTTGAGTGATGTAGCTT 59.368 41.667 0.00 0.00 0.00 3.74
505 3029 4.184629 GTCGGATTTTGAGTGATGTAGCT 58.815 43.478 0.00 0.00 0.00 3.32
506 3030 3.000322 CGTCGGATTTTGAGTGATGTAGC 60.000 47.826 0.00 0.00 0.00 3.58
507 3031 4.421058 TCGTCGGATTTTGAGTGATGTAG 58.579 43.478 0.00 0.00 0.00 2.74
508 3032 4.157105 TCTCGTCGGATTTTGAGTGATGTA 59.843 41.667 0.00 0.00 0.00 2.29
509 3033 3.056821 TCTCGTCGGATTTTGAGTGATGT 60.057 43.478 0.00 0.00 0.00 3.06
510 3034 3.511699 TCTCGTCGGATTTTGAGTGATG 58.488 45.455 0.00 0.00 0.00 3.07
511 3035 3.429547 CCTCTCGTCGGATTTTGAGTGAT 60.430 47.826 0.00 0.00 0.00 3.06
512 3036 2.094700 CCTCTCGTCGGATTTTGAGTGA 60.095 50.000 0.00 0.00 0.00 3.41
513 3037 2.263077 CCTCTCGTCGGATTTTGAGTG 58.737 52.381 0.00 0.00 0.00 3.51
514 3038 1.893801 ACCTCTCGTCGGATTTTGAGT 59.106 47.619 0.00 0.00 0.00 3.41
515 3039 2.656560 ACCTCTCGTCGGATTTTGAG 57.343 50.000 0.00 0.00 0.00 3.02
516 3040 2.611971 CCAACCTCTCGTCGGATTTTGA 60.612 50.000 0.00 0.00 0.00 2.69
517 3041 1.732259 CCAACCTCTCGTCGGATTTTG 59.268 52.381 0.00 0.00 0.00 2.44
518 3042 1.346722 ACCAACCTCTCGTCGGATTTT 59.653 47.619 0.00 0.00 0.00 1.82
519 3043 0.974383 ACCAACCTCTCGTCGGATTT 59.026 50.000 0.00 0.00 0.00 2.17
520 3044 1.749634 CTACCAACCTCTCGTCGGATT 59.250 52.381 0.00 0.00 0.00 3.01
521 3045 1.390565 CTACCAACCTCTCGTCGGAT 58.609 55.000 0.00 0.00 0.00 4.18
533 3057 3.047796 CACGCATCGTATACCTACCAAC 58.952 50.000 0.00 0.00 38.32 3.77
534 3058 2.689471 ACACGCATCGTATACCTACCAA 59.311 45.455 0.00 0.00 38.32 3.67
535 3059 2.033675 CACACGCATCGTATACCTACCA 59.966 50.000 0.00 0.00 38.32 3.25
536 3060 2.291465 TCACACGCATCGTATACCTACC 59.709 50.000 0.00 0.00 38.32 3.18
537 3061 3.249320 TCTCACACGCATCGTATACCTAC 59.751 47.826 0.00 0.00 38.32 3.18
538 3062 3.249320 GTCTCACACGCATCGTATACCTA 59.751 47.826 0.00 0.00 38.32 3.08
539 3063 2.033049 GTCTCACACGCATCGTATACCT 59.967 50.000 0.00 0.00 38.32 3.08
541 3065 2.034789 CGTCTCACACGCATCGTATAC 58.965 52.381 0.00 0.00 42.87 1.47
542 3066 2.378507 CGTCTCACACGCATCGTATA 57.621 50.000 0.00 0.00 42.87 1.47
544 3068 4.757554 CGTCTCACACGCATCGTA 57.242 55.556 0.00 0.00 42.87 3.43
553 3077 2.347114 CATGTGGCCCGTCTCACA 59.653 61.111 0.00 0.00 46.15 3.58
555 3079 2.482796 AATGCATGTGGCCCGTCTCA 62.483 55.000 0.00 0.00 43.89 3.27
556 3080 1.750399 AATGCATGTGGCCCGTCTC 60.750 57.895 0.00 0.00 43.89 3.36
557 3081 2.048023 CAATGCATGTGGCCCGTCT 61.048 57.895 0.00 0.00 43.89 4.18
559 3083 3.069946 CCAATGCATGTGGCCCGT 61.070 61.111 0.00 0.00 43.89 5.28
573 3139 2.652313 CCAGTCCGATTTTGGCCAA 58.348 52.632 16.05 16.05 0.00 4.52
574 3140 4.413928 CCAGTCCGATTTTGGCCA 57.586 55.556 0.00 0.00 0.00 5.36
579 3145 1.678970 GCCAGGCCAGTCCGATTTT 60.679 57.895 5.01 0.00 40.77 1.82
582 3148 4.101448 GTGCCAGGCCAGTCCGAT 62.101 66.667 9.64 0.00 40.77 4.18
598 3164 3.284449 GGTTCTTGGCCAACGCGT 61.284 61.111 16.05 5.58 35.02 6.01
599 3165 2.343163 TTTGGTTCTTGGCCAACGCG 62.343 55.000 16.05 3.53 44.70 6.01
600 3166 0.179097 TTTTGGTTCTTGGCCAACGC 60.179 50.000 16.05 7.36 44.70 4.84
603 3169 5.777732 ACTACATATTTTGGTTCTTGGCCAA 59.222 36.000 19.25 19.25 43.51 4.52
604 3170 5.329399 ACTACATATTTTGGTTCTTGGCCA 58.671 37.500 0.00 0.00 0.00 5.36
605 3171 5.914898 ACTACATATTTTGGTTCTTGGCC 57.085 39.130 0.00 0.00 0.00 5.36
606 3172 8.601845 AAAAACTACATATTTTGGTTCTTGGC 57.398 30.769 0.00 0.00 29.78 4.52
696 5500 7.713507 TCGGAAATGGACCATAATACACTTAAG 59.286 37.037 7.59 0.00 0.00 1.85
699 5503 5.820947 GTCGGAAATGGACCATAATACACTT 59.179 40.000 7.59 0.00 0.00 3.16
708 5512 0.611200 TGTCGTCGGAAATGGACCAT 59.389 50.000 0.00 0.00 0.00 3.55
710 5514 1.006832 CATGTCGTCGGAAATGGACC 58.993 55.000 0.00 0.00 34.73 4.46
723 5527 0.652592 CTAAAAGCCGCTCCATGTCG 59.347 55.000 0.00 0.00 0.00 4.35
734 5538 9.833182 TTTGAAACAAAAACAATTCTAAAAGCC 57.167 25.926 0.00 0.00 0.00 4.35
766 5570 6.033341 GCATTTTCGCATGTCAGGTTAATTA 58.967 36.000 0.00 0.00 0.00 1.40
767 5571 4.864247 GCATTTTCGCATGTCAGGTTAATT 59.136 37.500 0.00 0.00 0.00 1.40
768 5572 4.082300 TGCATTTTCGCATGTCAGGTTAAT 60.082 37.500 0.00 0.00 36.86 1.40
769 5573 3.254411 TGCATTTTCGCATGTCAGGTTAA 59.746 39.130 0.00 0.00 36.86 2.01
789 5593 3.375782 AGTGCTCATTGTTTTCCTTGC 57.624 42.857 0.00 0.00 0.00 4.01
790 5594 5.239306 TCACTAGTGCTCATTGTTTTCCTTG 59.761 40.000 18.45 0.00 0.00 3.61
801 5605 4.357918 AACAAAGGTCACTAGTGCTCAT 57.642 40.909 18.45 8.44 0.00 2.90
807 5611 5.099042 ACTCACAAACAAAGGTCACTAGT 57.901 39.130 0.00 0.00 0.00 2.57
890 5694 8.655935 AAGGACCTCATTCTTACATTTTTCAT 57.344 30.769 0.00 0.00 0.00 2.57
891 5695 8.477419 AAAGGACCTCATTCTTACATTTTTCA 57.523 30.769 0.00 0.00 0.00 2.69
897 5701 8.331931 TGGTATAAAGGACCTCATTCTTACAT 57.668 34.615 0.00 0.00 37.88 2.29
899 5703 7.217906 CCTGGTATAAAGGACCTCATTCTTAC 58.782 42.308 0.00 0.00 36.91 2.34
900 5704 6.183361 GCCTGGTATAAAGGACCTCATTCTTA 60.183 42.308 0.00 0.00 36.91 2.10
901 5705 5.398012 GCCTGGTATAAAGGACCTCATTCTT 60.398 44.000 0.00 0.00 36.91 2.52
902 5706 4.103311 GCCTGGTATAAAGGACCTCATTCT 59.897 45.833 0.00 0.00 36.91 2.40
903 5707 4.390264 GCCTGGTATAAAGGACCTCATTC 58.610 47.826 0.00 0.00 36.91 2.67
919 5723 3.552384 TCGTTCGGTTGGCCTGGT 61.552 61.111 3.32 0.00 0.00 4.00
932 5736 2.342648 GGACTTGCCTCCGTCGTT 59.657 61.111 0.00 0.00 0.00 3.85
951 5755 6.651975 TTTATAGGAGGGAAGAAGACGATC 57.348 41.667 0.00 0.00 0.00 3.69
1030 5834 0.669932 GCTGCTGGTCTGAGTCTGTG 60.670 60.000 0.00 0.00 0.00 3.66
1031 5835 0.831288 AGCTGCTGGTCTGAGTCTGT 60.831 55.000 0.00 0.00 0.00 3.41
1157 5963 2.032528 CACCATGCTGTCACCCGT 59.967 61.111 0.00 0.00 0.00 5.28
1488 6315 1.130373 CGAATGGCTTATGCGTGTTGT 59.870 47.619 0.00 0.00 40.82 3.32
1569 6419 1.915614 GACCACTTGCTGATGCCACG 61.916 60.000 0.00 0.00 38.71 4.94
1576 6426 1.000506 GTACGGAAGACCACTTGCTGA 59.999 52.381 0.00 0.00 41.26 4.26
1771 6663 6.362820 GTCTAACTTTTCAAGTCGTACAGAGG 59.637 42.308 0.00 0.00 41.91 3.69
1927 6891 7.769044 GGTGGAGAGTTAGCAAAACAGATAATA 59.231 37.037 4.96 0.00 0.00 0.98
1990 6962 6.207614 TCATGTGATCTCGGAGTCTATAAAGG 59.792 42.308 4.69 0.00 0.00 3.11
1998 6970 3.443037 CTTGTCATGTGATCTCGGAGTC 58.557 50.000 4.69 3.11 0.00 3.36
2015 6987 3.004090 GGCCGGGGTTATCCTTGT 58.996 61.111 2.18 0.00 35.33 3.16
2016 6988 2.203153 CGGCCGGGGTTATCCTTG 60.203 66.667 20.10 0.00 35.33 3.61
2027 6999 1.867233 CATTACTTTGATCTCGGCCGG 59.133 52.381 27.83 16.54 0.00 6.13
2071 7043 2.167662 CAAAGGGCGGTGTTATCCTTT 58.832 47.619 0.00 0.00 46.81 3.11
2074 7046 1.807226 GCAAAGGGCGGTGTTATCC 59.193 57.895 0.00 0.00 0.00 2.59
2090 7062 0.249826 TGTGTGCATCTCTCGTTGCA 60.250 50.000 0.00 0.00 46.03 4.08
2091 7063 0.867746 TTGTGTGCATCTCTCGTTGC 59.132 50.000 0.00 0.00 39.33 4.17
2092 7064 1.195448 GGTTGTGTGCATCTCTCGTTG 59.805 52.381 0.00 0.00 0.00 4.10
2093 7065 1.202639 TGGTTGTGTGCATCTCTCGTT 60.203 47.619 0.00 0.00 0.00 3.85
2094 7066 0.392706 TGGTTGTGTGCATCTCTCGT 59.607 50.000 0.00 0.00 0.00 4.18
2095 7067 1.730501 ATGGTTGTGTGCATCTCTCG 58.269 50.000 0.00 0.00 0.00 4.04
2096 7068 4.510038 AAAATGGTTGTGTGCATCTCTC 57.490 40.909 0.00 0.00 0.00 3.20
2098 7070 8.931385 AATAATAAAATGGTTGTGTGCATCTC 57.069 30.769 0.00 0.00 0.00 2.75
2131 7103 6.451960 CGAAAATTTTCCCGCGAAGATAAAAC 60.452 38.462 22.15 0.00 33.68 2.43
2137 7109 2.144730 TCGAAAATTTTCCCGCGAAGA 58.855 42.857 22.15 10.81 33.68 2.87
2138 7110 2.604969 TCGAAAATTTTCCCGCGAAG 57.395 45.000 22.15 8.86 33.68 3.79
2141 7113 2.825086 AGATCGAAAATTTTCCCGCG 57.175 45.000 22.15 13.04 33.68 6.46
2187 7159 2.110967 GGAGGGACGATGACGACGA 61.111 63.158 0.00 0.00 42.66 4.20
2189 7161 1.726533 GAGGGAGGGACGATGACGAC 61.727 65.000 0.00 0.00 42.66 4.34
2190 7162 1.453379 GAGGGAGGGACGATGACGA 60.453 63.158 0.00 0.00 42.66 4.20
2199 7171 4.779733 GGCTCGGTGAGGGAGGGA 62.780 72.222 0.00 0.00 32.10 4.20
2209 7181 3.785122 AAGTTTTGCCCGGCTCGGT 62.785 57.895 11.61 0.00 46.80 4.69
2211 7183 2.070654 AACAAGTTTTGCCCGGCTCG 62.071 55.000 11.61 0.00 0.00 5.03
2218 7191 7.359262 ACTTTTTACTTCAACAAGTTTTGCC 57.641 32.000 0.00 0.00 40.16 4.52
2232 7205 3.317149 GGCGACTTCCCAACTTTTTACTT 59.683 43.478 0.00 0.00 0.00 2.24
2237 7210 0.464916 ACGGCGACTTCCCAACTTTT 60.465 50.000 16.62 0.00 0.00 2.27
2239 7212 1.597027 CACGGCGACTTCCCAACTT 60.597 57.895 16.62 0.00 0.00 2.66
2246 7219 2.453638 GCCTTAGCACGGCGACTTC 61.454 63.158 16.62 0.00 37.87 3.01
2273 7246 1.593196 TGTTGTTCTAGTGTGCTGGC 58.407 50.000 0.00 0.00 0.00 4.85
2277 7250 2.412847 GGCGATTGTTGTTCTAGTGTGC 60.413 50.000 0.00 0.00 0.00 4.57
2288 7261 2.159430 TCTTCATCAACGGCGATTGTTG 59.841 45.455 16.62 17.96 46.23 3.33
2290 7263 2.002586 CTCTTCATCAACGGCGATTGT 58.997 47.619 16.62 3.08 0.00 2.71
2300 7273 4.814771 TCGATCTACGCTACTCTTCATCAA 59.185 41.667 0.00 0.00 42.26 2.57
2301 7274 4.377897 TCGATCTACGCTACTCTTCATCA 58.622 43.478 0.00 0.00 42.26 3.07
2305 7278 4.272991 TCCTTTCGATCTACGCTACTCTTC 59.727 45.833 0.00 0.00 42.26 2.87
2317 7290 5.365025 TCTTCAGATTGGATCCTTTCGATCT 59.635 40.000 14.23 10.54 45.90 2.75
2323 7296 5.006386 GTGTGTCTTCAGATTGGATCCTTT 58.994 41.667 14.23 0.00 0.00 3.11
2337 7310 3.305964 TCGTCTTCATTCGTGTGTCTTC 58.694 45.455 0.00 0.00 0.00 2.87
2345 7318 3.211803 TCATCGTTCGTCTTCATTCGT 57.788 42.857 0.00 0.00 0.00 3.85
2346 7319 3.791353 TGATCATCGTTCGTCTTCATTCG 59.209 43.478 0.00 0.00 0.00 3.34
2347 7320 5.037385 TCTGATCATCGTTCGTCTTCATTC 58.963 41.667 0.00 0.00 0.00 2.67
2348 7321 4.998788 TCTGATCATCGTTCGTCTTCATT 58.001 39.130 0.00 0.00 0.00 2.57
2349 7322 4.639135 TCTGATCATCGTTCGTCTTCAT 57.361 40.909 0.00 0.00 0.00 2.57
2350 7323 4.498177 GGATCTGATCATCGTTCGTCTTCA 60.498 45.833 18.64 0.00 0.00 3.02
2351 7324 3.978217 GGATCTGATCATCGTTCGTCTTC 59.022 47.826 18.64 0.00 0.00 2.87
2352 7325 3.381590 TGGATCTGATCATCGTTCGTCTT 59.618 43.478 18.64 0.00 0.00 3.01
2353 7326 2.952310 TGGATCTGATCATCGTTCGTCT 59.048 45.455 18.64 0.00 0.00 4.18
2354 7327 3.046390 GTGGATCTGATCATCGTTCGTC 58.954 50.000 18.64 0.00 0.00 4.20
2366 7339 1.627864 TCTGTCGTTGGTGGATCTGA 58.372 50.000 0.00 0.00 0.00 3.27
2377 7350 1.405821 GTCTCCGATGGATCTGTCGTT 59.594 52.381 15.53 0.00 36.17 3.85
2378 7351 1.025812 GTCTCCGATGGATCTGTCGT 58.974 55.000 15.53 0.00 36.17 4.34
2379 7352 1.025041 TGTCTCCGATGGATCTGTCG 58.975 55.000 11.61 11.61 37.58 4.35
2380 7353 1.751351 TGTGTCTCCGATGGATCTGTC 59.249 52.381 0.00 0.00 0.00 3.51
2381 7354 1.478510 GTGTGTCTCCGATGGATCTGT 59.521 52.381 0.00 0.00 0.00 3.41
2382 7355 1.202463 GGTGTGTCTCCGATGGATCTG 60.202 57.143 0.00 0.00 0.00 2.90
2383 7356 1.115467 GGTGTGTCTCCGATGGATCT 58.885 55.000 0.00 0.00 0.00 2.75
2384 7357 1.067821 GAGGTGTGTCTCCGATGGATC 59.932 57.143 0.00 0.00 0.00 3.36
2385 7358 1.115467 GAGGTGTGTCTCCGATGGAT 58.885 55.000 0.00 0.00 0.00 3.41
2386 7359 0.970937 GGAGGTGTGTCTCCGATGGA 60.971 60.000 0.00 0.00 43.19 3.41
2387 7360 1.517832 GGAGGTGTGTCTCCGATGG 59.482 63.158 0.00 0.00 43.19 3.51
2400 7373 3.379445 CGGTAGGCGTGTGGAGGT 61.379 66.667 0.00 0.00 0.00 3.85
2404 7377 3.060020 ATCGTCGGTAGGCGTGTGG 62.060 63.158 0.00 0.00 46.96 4.17
2416 7389 2.663602 GGTGCATAGAATAGCATCGTCG 59.336 50.000 0.00 0.00 43.44 5.12
2428 7401 1.216977 CGTTCCGGTGGTGCATAGA 59.783 57.895 0.00 0.00 0.00 1.98
2429 7402 1.813753 CCGTTCCGGTGGTGCATAG 60.814 63.158 0.00 0.00 42.73 2.23
2430 7403 2.266372 CCGTTCCGGTGGTGCATA 59.734 61.111 0.00 0.00 42.73 3.14
2441 7414 4.176752 CTGCCTAGCCCCCGTTCC 62.177 72.222 0.00 0.00 0.00 3.62
2444 7417 4.733725 TTCCTGCCTAGCCCCCGT 62.734 66.667 0.00 0.00 0.00 5.28
2445 7418 3.866582 CTTCCTGCCTAGCCCCCG 61.867 72.222 0.00 0.00 0.00 5.73
2450 7423 4.058434 AGGTCCTTCCTGCCTAGC 57.942 61.111 0.00 0.00 46.19 3.42
2459 7432 5.372373 CCTGAAGATGGAATAAGGTCCTTC 58.628 45.833 7.61 0.00 40.53 3.46
2460 7433 4.166919 CCCTGAAGATGGAATAAGGTCCTT 59.833 45.833 9.62 9.62 38.62 3.36
2462 7435 3.716872 TCCCTGAAGATGGAATAAGGTCC 59.283 47.826 0.00 0.00 38.27 4.46
2466 7439 4.387598 CAGCTCCCTGAAGATGGAATAAG 58.612 47.826 0.00 0.00 41.77 1.73
2486 7459 2.357517 AAAGCGAGACGGTGGCAG 60.358 61.111 0.00 0.00 37.73 4.85
2487 7460 2.357034 GAAAGCGAGACGGTGGCA 60.357 61.111 0.00 0.00 37.73 4.92
2488 7461 3.119096 GGAAAGCGAGACGGTGGC 61.119 66.667 0.00 0.00 37.73 5.01
2491 7464 1.587054 CTCAGGAAAGCGAGACGGT 59.413 57.895 0.00 0.00 40.00 4.83
2501 7474 2.622942 GGTTTGTGTCATGCTCAGGAAA 59.377 45.455 0.00 0.00 0.00 3.13
2504 7477 0.883833 GGGTTTGTGTCATGCTCAGG 59.116 55.000 0.00 0.00 0.00 3.86
2507 7480 3.451141 TTTTGGGTTTGTGTCATGCTC 57.549 42.857 0.00 0.00 0.00 4.26
2514 7487 6.706295 TCTTTCTTTCATTTTGGGTTTGTGT 58.294 32.000 0.00 0.00 0.00 3.72
2529 7503 6.315551 GGCTCCGTTTTTAGATCTTTCTTTC 58.684 40.000 0.00 0.00 33.17 2.62
2535 7509 3.370633 GGAGGGCTCCGTTTTTAGATCTT 60.371 47.826 0.00 0.00 40.36 2.40
2562 7536 2.287829 GGTGGATCCCGACTCTTGT 58.712 57.895 9.90 0.00 0.00 3.16
2573 7547 4.241555 ATGAGGGCGCGGTGGATC 62.242 66.667 8.83 0.00 0.00 3.36
2602 7576 3.062466 TCCGCCTCGTCTCCAGTG 61.062 66.667 0.00 0.00 0.00 3.66
2636 7610 4.452733 GGGTTCCTCTGCGTCCCG 62.453 72.222 0.00 0.00 0.00 5.14
2641 7615 0.250513 AAGCTTAGGGTTCCTCTGCG 59.749 55.000 0.00 0.00 37.17 5.18
2644 7618 4.850386 TCCTTAAAAGCTTAGGGTTCCTCT 59.150 41.667 12.81 0.00 36.04 3.69
2646 7620 4.850386 TCTCCTTAAAAGCTTAGGGTTCCT 59.150 41.667 12.81 0.00 36.04 3.36
2663 7637 1.684049 CACCGCCTCCTCTCTCCTT 60.684 63.158 0.00 0.00 0.00 3.36
2667 7641 2.120718 AACCACCGCCTCCTCTCT 59.879 61.111 0.00 0.00 0.00 3.10
2676 7650 2.388232 GGATCGACACAACCACCGC 61.388 63.158 0.00 0.00 0.00 5.68
2678 7652 1.535462 CAAAGGATCGACACAACCACC 59.465 52.381 0.00 0.00 0.00 4.61
2680 7654 1.890876 CCAAAGGATCGACACAACCA 58.109 50.000 0.00 0.00 0.00 3.67
2731 7714 9.868277 TGATCCATATATTTGTTTTGTTGGTTC 57.132 29.630 0.00 0.00 0.00 3.62
2733 7716 9.651913 GTTGATCCATATATTTGTTTTGTTGGT 57.348 29.630 0.00 0.00 0.00 3.67
2734 7717 9.097257 GGTTGATCCATATATTTGTTTTGTTGG 57.903 33.333 0.00 0.00 35.97 3.77
2735 7718 9.097257 GGGTTGATCCATATATTTGTTTTGTTG 57.903 33.333 0.00 0.00 38.11 3.33
2736 7719 7.978975 CGGGTTGATCCATATATTTGTTTTGTT 59.021 33.333 0.00 0.00 38.11 2.83
2737 7720 7.340743 TCGGGTTGATCCATATATTTGTTTTGT 59.659 33.333 0.00 0.00 38.11 2.83
2738 7721 7.711846 TCGGGTTGATCCATATATTTGTTTTG 58.288 34.615 0.00 0.00 38.11 2.44
2739 7722 7.889873 TCGGGTTGATCCATATATTTGTTTT 57.110 32.000 0.00 0.00 38.11 2.43
2740 7723 7.889873 TTCGGGTTGATCCATATATTTGTTT 57.110 32.000 0.00 0.00 38.11 2.83
2741 7724 7.470009 GCTTTCGGGTTGATCCATATATTTGTT 60.470 37.037 0.00 0.00 38.11 2.83
2742 7725 6.016276 GCTTTCGGGTTGATCCATATATTTGT 60.016 38.462 0.00 0.00 38.11 2.83
2743 7726 6.381801 GCTTTCGGGTTGATCCATATATTTG 58.618 40.000 0.00 0.00 38.11 2.32
2744 7727 5.476945 GGCTTTCGGGTTGATCCATATATTT 59.523 40.000 0.00 0.00 38.11 1.40
2745 7728 5.010282 GGCTTTCGGGTTGATCCATATATT 58.990 41.667 0.00 0.00 38.11 1.28
2746 7729 4.589908 GGCTTTCGGGTTGATCCATATAT 58.410 43.478 0.00 0.00 38.11 0.86
2747 7730 3.556213 CGGCTTTCGGGTTGATCCATATA 60.556 47.826 0.00 0.00 38.11 0.86
2748 7731 2.810400 CGGCTTTCGGGTTGATCCATAT 60.810 50.000 0.00 0.00 38.11 1.78
2749 7732 1.474320 CGGCTTTCGGGTTGATCCATA 60.474 52.381 0.00 0.00 38.11 2.74
2750 7733 0.748005 CGGCTTTCGGGTTGATCCAT 60.748 55.000 0.00 0.00 38.11 3.41
2751 7734 1.376683 CGGCTTTCGGGTTGATCCA 60.377 57.895 0.00 0.00 38.11 3.41
2752 7735 1.366854 GACGGCTTTCGGGTTGATCC 61.367 60.000 0.00 0.00 44.45 3.36
2753 7736 0.391263 AGACGGCTTTCGGGTTGATC 60.391 55.000 0.00 0.00 44.45 2.92
2754 7737 0.036306 AAGACGGCTTTCGGGTTGAT 59.964 50.000 0.00 0.00 44.45 2.57
2755 7738 0.179040 AAAGACGGCTTTCGGGTTGA 60.179 50.000 11.42 0.00 40.19 3.18
2756 7739 2.327228 AAAGACGGCTTTCGGGTTG 58.673 52.632 11.42 0.00 40.19 3.77
2757 7740 4.892002 AAAGACGGCTTTCGGGTT 57.108 50.000 11.42 0.00 40.19 4.11
2767 7750 2.069273 CAGTAGTTGCCAGAAAGACGG 58.931 52.381 0.00 0.00 0.00 4.79
2768 7751 2.476619 CACAGTAGTTGCCAGAAAGACG 59.523 50.000 0.00 0.00 0.00 4.18
2769 7752 2.808543 CCACAGTAGTTGCCAGAAAGAC 59.191 50.000 0.00 0.00 0.00 3.01
2770 7753 2.810400 GCCACAGTAGTTGCCAGAAAGA 60.810 50.000 0.00 0.00 30.59 2.52
2771 7754 1.537202 GCCACAGTAGTTGCCAGAAAG 59.463 52.381 0.00 0.00 30.59 2.62
2772 7755 1.142870 AGCCACAGTAGTTGCCAGAAA 59.857 47.619 0.00 0.00 37.11 2.52
2773 7756 0.764890 AGCCACAGTAGTTGCCAGAA 59.235 50.000 0.00 0.00 37.11 3.02
2774 7757 1.639722 TAGCCACAGTAGTTGCCAGA 58.360 50.000 0.00 0.00 37.11 3.86
2775 7758 2.698855 ATAGCCACAGTAGTTGCCAG 57.301 50.000 0.00 0.00 37.11 4.85
2776 7759 2.169769 GGTATAGCCACAGTAGTTGCCA 59.830 50.000 0.00 0.00 37.11 4.92
2777 7760 2.434702 AGGTATAGCCACAGTAGTTGCC 59.565 50.000 0.00 0.00 37.11 4.52
2778 7761 3.821421 AGGTATAGCCACAGTAGTTGC 57.179 47.619 0.00 0.00 40.61 4.17
2779 7762 5.833082 CTGTAGGTATAGCCACAGTAGTTG 58.167 45.833 18.68 0.00 39.43 3.16
2785 7768 4.207955 TCAGACTGTAGGTATAGCCACAG 58.792 47.826 23.32 23.32 44.53 3.66
2786 7769 4.245251 TCAGACTGTAGGTATAGCCACA 57.755 45.455 1.59 3.23 40.61 4.17
2787 7770 5.302059 TCATTCAGACTGTAGGTATAGCCAC 59.698 44.000 1.59 0.00 40.61 5.01
2788 7771 5.454966 TCATTCAGACTGTAGGTATAGCCA 58.545 41.667 1.59 0.00 40.61 4.75
2789 7772 6.015010 ACATCATTCAGACTGTAGGTATAGCC 60.015 42.308 1.59 0.00 37.58 3.93
2790 7773 6.865726 CACATCATTCAGACTGTAGGTATAGC 59.134 42.308 1.59 0.00 0.00 2.97
2791 7774 7.946207 ACACATCATTCAGACTGTAGGTATAG 58.054 38.462 1.59 0.00 0.00 1.31
2792 7775 7.014326 GGACACATCATTCAGACTGTAGGTATA 59.986 40.741 1.59 0.00 0.00 1.47
2793 7776 6.183360 GGACACATCATTCAGACTGTAGGTAT 60.183 42.308 1.59 0.00 0.00 2.73
2794 7777 5.127194 GGACACATCATTCAGACTGTAGGTA 59.873 44.000 1.59 0.00 0.00 3.08
2795 7778 4.081420 GGACACATCATTCAGACTGTAGGT 60.081 45.833 1.59 0.00 0.00 3.08
2796 7779 4.161189 AGGACACATCATTCAGACTGTAGG 59.839 45.833 1.59 0.00 0.00 3.18
2797 7780 5.105595 TCAGGACACATCATTCAGACTGTAG 60.106 44.000 1.59 0.00 0.00 2.74
2798 7781 4.772100 TCAGGACACATCATTCAGACTGTA 59.228 41.667 1.59 0.00 0.00 2.74
2799 7782 3.580022 TCAGGACACATCATTCAGACTGT 59.420 43.478 1.59 0.00 0.00 3.55
2800 7783 3.931468 GTCAGGACACATCATTCAGACTG 59.069 47.826 0.00 0.00 0.00 3.51
2801 7784 3.055530 GGTCAGGACACATCATTCAGACT 60.056 47.826 1.41 0.00 0.00 3.24
2802 7785 3.055530 AGGTCAGGACACATCATTCAGAC 60.056 47.826 1.41 0.00 0.00 3.51
2803 7786 3.176411 AGGTCAGGACACATCATTCAGA 58.824 45.455 1.41 0.00 0.00 3.27
2804 7787 3.623906 AGGTCAGGACACATCATTCAG 57.376 47.619 1.41 0.00 0.00 3.02
2805 7788 3.678289 CAAGGTCAGGACACATCATTCA 58.322 45.455 1.41 0.00 0.00 2.57
2806 7789 2.421424 GCAAGGTCAGGACACATCATTC 59.579 50.000 1.41 0.00 0.00 2.67
2807 7790 2.224843 TGCAAGGTCAGGACACATCATT 60.225 45.455 1.41 0.00 0.00 2.57
2808 7791 1.352017 TGCAAGGTCAGGACACATCAT 59.648 47.619 1.41 0.00 0.00 2.45
2809 7792 0.764271 TGCAAGGTCAGGACACATCA 59.236 50.000 1.41 0.00 0.00 3.07
2810 7793 2.012673 GATGCAAGGTCAGGACACATC 58.987 52.381 0.00 5.31 0.00 3.06
2811 7794 1.352017 TGATGCAAGGTCAGGACACAT 59.648 47.619 0.00 0.00 0.00 3.21
2812 7795 0.764271 TGATGCAAGGTCAGGACACA 59.236 50.000 0.00 0.00 0.00 3.72
2813 7796 1.896220 TTGATGCAAGGTCAGGACAC 58.104 50.000 0.00 0.00 0.00 3.67
2814 7797 2.885135 ATTGATGCAAGGTCAGGACA 57.115 45.000 0.00 0.00 0.00 4.02
2815 7798 3.375299 GTGTATTGATGCAAGGTCAGGAC 59.625 47.826 0.00 0.00 0.00 3.85
2816 7799 3.008923 TGTGTATTGATGCAAGGTCAGGA 59.991 43.478 0.00 0.00 0.00 3.86
2817 7800 3.127548 GTGTGTATTGATGCAAGGTCAGG 59.872 47.826 0.00 0.00 0.00 3.86
2818 7801 3.127548 GGTGTGTATTGATGCAAGGTCAG 59.872 47.826 0.00 0.00 0.00 3.51
2819 7802 3.081061 GGTGTGTATTGATGCAAGGTCA 58.919 45.455 0.00 0.00 0.00 4.02
2820 7803 3.081061 TGGTGTGTATTGATGCAAGGTC 58.919 45.455 0.00 0.00 0.00 3.85
2821 7804 3.153369 TGGTGTGTATTGATGCAAGGT 57.847 42.857 0.00 0.00 0.00 3.50
2822 7805 3.949754 AGATGGTGTGTATTGATGCAAGG 59.050 43.478 0.00 0.00 0.00 3.61
2823 7806 6.682423 TTAGATGGTGTGTATTGATGCAAG 57.318 37.500 0.00 0.00 0.00 4.01
2824 7807 7.445096 CCTATTAGATGGTGTGTATTGATGCAA 59.555 37.037 0.00 0.00 0.00 4.08
2825 7808 6.936335 CCTATTAGATGGTGTGTATTGATGCA 59.064 38.462 0.00 0.00 0.00 3.96
2826 7809 6.372659 CCCTATTAGATGGTGTGTATTGATGC 59.627 42.308 0.00 0.00 0.00 3.91
2827 7810 7.388776 CACCCTATTAGATGGTGTGTATTGATG 59.611 40.741 9.71 0.00 43.62 3.07
2828 7811 7.453393 CACCCTATTAGATGGTGTGTATTGAT 58.547 38.462 9.71 0.00 43.62 2.57
2829 7812 6.183361 CCACCCTATTAGATGGTGTGTATTGA 60.183 42.308 14.39 0.00 46.49 2.57
2830 7813 5.997746 CCACCCTATTAGATGGTGTGTATTG 59.002 44.000 14.39 0.27 46.49 1.90
2831 7814 5.670361 ACCACCCTATTAGATGGTGTGTATT 59.330 40.000 15.13 0.00 46.49 1.89
2832 7815 5.224441 ACCACCCTATTAGATGGTGTGTAT 58.776 41.667 15.13 0.48 46.49 2.29
2833 7816 4.627015 ACCACCCTATTAGATGGTGTGTA 58.373 43.478 15.13 0.00 46.49 2.90
2834 7817 3.454812 GACCACCCTATTAGATGGTGTGT 59.545 47.826 18.87 14.19 45.55 3.72
2835 7818 3.711704 AGACCACCCTATTAGATGGTGTG 59.288 47.826 18.87 12.03 45.55 3.82
2836 7819 3.967987 GAGACCACCCTATTAGATGGTGT 59.032 47.826 18.87 16.06 45.55 4.16
2837 7820 3.967326 TGAGACCACCCTATTAGATGGTG 59.033 47.826 18.87 14.78 45.55 4.17
2839 7822 4.608948 GTGAGACCACCCTATTAGATGG 57.391 50.000 10.73 10.73 37.33 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.