>input_sequence_66377
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-------------------------------------------AGCCAGCTCTTCCTCTGCCCACCCAACAACCACAGAC
TCAGACCAGCAGCTCAGCTCTCAACTGCCGT--CGATGGCGAAATGCAGCAAGATCCACAACATCGTCTTGCTCCGGCAG
ACCCTGCAGCGGTGGCGGTCCCGTGCCGCGGCGCGCGCTGCTACGGGTGACAGCATG---GTGTCGGTGCCGGCGGGGCA
CGTGGCGGTGTGCGTGGGCGGCGCGTCGCGGCGGTTCGTCGTGCGGGCGGCGCACCTGAACCACCCCGTGTTCCGGGAGC
TGCTCCGGCAGGCGGAGGAGGAGTACGGGTTCCCCTCCGGCGCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGACGTCCTCCGCCGCGTCTCCTCCGAGGAGCGCCTCGGC------------------GTGGCGGCCGTCAGCAG
CTGCGACATCGCGACGCGGCCGTTGCTGCAGAGGATGGCGGCGGAGGAGCTCGTGTGGTGACCGGTCGATGGAAACAACA
CGCATAAGCCATTCGGCA--------TACGTGCTCTGTTCTCACATAAGGTAGCCCTGGCGATTTGACTCCGGCGACGGC
---------------AGCCGTGGCATCAGCAAGTGGTCTTCCGTACGCGGAAATGGCGAAATCATGTCGCCGC-------
TGGGAAGACT----CCGCCCGCCCACCGGCGCGCACGGCAAGCGCCCGAGGACC------GAATGTCTTATTGACGGACG
TTGTCCGGTGTCCGGTGTAGCCGTCAGCGG-----------------------CGCCCCGAAACACGAATCGGGGACGGT
GCCGCGCGTG--AGCAACCGAGCCTCTGTACGACTTGAAAAGTTAGACTGTAGTTAGAAGAAATTTGTA---GTGATTAG
TTCAAGATGAAGATGACGAATTTTGTGATTGTCGTAATTAATCGATTGCATTCCT-------------------------
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>chr2D_1_TraesCS2D01G495300
AAAATGATTTTTTTTACTTGTGGTGGTTAACCAAAGGCAAAGCTTCATCACCGGCGGGATGGATCAAGACATGTAATACT
ACTACTAATAAACAACAGTTGTACTACTAACTTGCAATTGACTGTACCTGCACTACACTA-CTATGACTAGCTTGTAATC
AAACTGTACATGCACTACGCTTCTATTACTAGGCTACGACTATAGTAGTGGTTGT--CCTCGGGCGACAAAGCTTGTTGG
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-----------------------AGGCGTTGCACGCTCACCCTAATAAGCTAGCTCGGGCCTCAAGCTGCACCATGCATG
CATTCATCTAGGATGATTCGTATAGCTTTTGAGGAGAAAACAGTGTTAATTGCAACGCCATGGCCAAGTGAAACCTCTAC
AAGTACATCTAGCGTACATATACACGGCATTGTAATGCTCGTACCTTTTCCGTGAAAACTAGCACTCATGCAACACCCAC
AAAAGTTA-----------------AGACGTGCTGCGTGGCCTGAAATCCGCTTGGCGATCTTCCGAAAGCTACATCACT
CAAAATCCGACGAGAGGTTGGTAGGTATACGATGCGTGTGAGA-------------------------------------
-----CGGGCCACATGCATTGGCCAAAATCGGACTGGCCTGGCACGCGTTGGCCAAGAACCAAAATAT------------
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----------------------------------------------------GTAGTTTTTTTTACA-------------
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-----------------------------------------------------------------GCAACAGTATCAAAG
ATATATAAGAGGAAAACATGTTTAG----------------TTTTTATAGGAATATGTACTTAAGTGTATTATGGTCCAT
TTCCGACGACATGGAGCGGCTTTTAGAATTGTTTTTGTTTCAAATCAGCTAATTAACCTGACATGCGAAAATGCAAGGAA
AACAATGAGCACTAGTGACCTTTGTTTGTGAGTATAAATTGTTTCAACTGAAAAATGTAAATATTTAAACACCGAAGCAT
GCATATGAGCAAAATGAAAAATGTAAGAATGAGGTCCTTTATACCAGGCCAACCGAACGACGGAGGCAAGTCCCGATCGT
CTTCTTCCCTCCTATAAAACCTCCTCCCCCGCCACCTACAGGAAGCCAGCTCTTCCTCTGCCCACCCAACAACCACAGAC
TCAGACCAGCAGCTCAGCTCTCAACTGCCGT--CGATGGCGAAATGCAGCAAGATCCACAACATCGTCTTGCTCCGGCAG
ACCCTGCAGCGGTGGCGGTCCCGTGCCGCGGCGCGCGCTGCTACGGGTGACAGCATG---GTGTCGGTGCCGGCGGGGCA
CGTGGCGGTGTGCGTGGGCGGCGCGTCGCGGCGGTTCGTCGTGCGGGCGGCGCACCTGAACCACCCCGTGTTCCGGGAGC
TGCTCCGGCAGGCGGAGGAGGAGTACGGGTTCCCCTCCGGCGCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGACGTCCTCCGCCGCGTCTCCTCCGAGGAGCGCCTCGGC------------------GTGGCGGCCGTCAGCAG
CTGCGACATCGCGACGCGGCCGTTGCTGCAGAGGATGGCGGCGGAGGAGCTCGTGTGGTGACCGGTCGATGGAAACAACA
CGCATAAGCCATTCGGCA--------TACGTGCTCTGTTCTCACATAAGGTAGCCCTGGCGATTTGACTCCGGCGACGGC
---------------AGCCGTGGCATCAGCAAGTGGTCTTCCGTACGCGGAAATGGCGAAATCATGTCGCCGC-------
TGGGAAGACT----CCGCCCGCCCACCGGCGCGCACGGCAAGCGCCCGAGGACC------GAATGTCTTATTGACGGACG
TTGTCCGGTGTCCGGTGTAGCCGTCAGCGG-----------------------CGCCCCGAAACACGAATCGGGGACGGT
GCCGCGCGTG--AGCAACCGAGCCTCTGTACGACTTGAAAAGTTAGACTGTAGTTAGAAGAAATTTGTA---GTGATTAG
TTCAAGATGAAGATGACGAATTTTGTGATTGTCGTAATTAATCGATTGCATTCCTTGCCGCTAAT--------------A
AT------------------------------------------------GTCTTGGCTCT-------CCATGGGTGTCA
TTAGCTGTTGTATTA--------TCTGTTTTGCTAACTCTCCACCGATTAAGAACTTTCTTATTAATGTGCAAGATTCAC
ACCTTTATAGACTCCGAGATCACATGACAAGGATAACCCCGGCCGAGATCAAAGTAATGTTTTAAGAGTTTTTTCCAAAA
AAAAAGGATAACACCGCCCTTTGCAACGAGAGATGCACACAACCATTTTATTATTTTGTTTTGTTTTATCTTCGCGGGAA
AATTTTCGATCTATTCATCTTCAATCATGGCATGCGCGTCGTCGTCATCGTCCCTCCCTCACC-GAGCCGGGCAAAACTT
GTTGAAGTAAAAAGTTGGGAAGTCGCCGTGCTAAGGCATCGTAGGGCCAGCACACTAGAACAACAATCGCCGTTGATGAA
GAGTAGCGTAGATCGAAAGGATCCAATCTGAAGACACACGAATGAAGACGAACGATGATCAGATCCACCAACGACAGATC
CATCGGAGACACACCTCCACACGCCTACCGACGATGCTATTCTATGCACCACCGGAACGGGGGCTAGGCAGGAAGGACCT
TATTCCATCTTCAGGGAGCTGCCACCGTCTCGCTTTCCTGAGCATGACACAAACCCAAAA-TGAAAGAAAGATCTAAAAA
CGGAGCCCTCCCGCGACAAGAGTCGGGATCCACCGCGCCCTCATGGCCCTAAGGCCACTGGAGACGAGGCGGACGGGCTG
CAGCGCCGGCGGGACGCAGAGGAACCCTAAGCTTTTAAGGAGAGAGGAGGCGGTGGT---------TGTGTCGATCCTTT
GGCTAGCTAGCCATTTTATTATTTTATTTAATAGAACCAACAAAACAAATATATGGATCAACCCGAAAGCCGTCTTTCTG
GCAACTACTGTGGCTATACCTACAGTCTGAATGATGTGTCCTGACCTTGCATCAATACACACCATCTAATAGGGTGGTCT
CACCAAGCCGCCCGCCAGCAAGC
>chr2D_82
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-CTAGTAATTAACAATAGTTGTACTACTAACTTGCAATTGACTGTACCTGCACCACCATTTCTATGACTAGCTTGTAATC
AA-CTGTACCTGCACTACACTTCT---ACCAGGCTACAACTATAATCGTGTTGGAGGCCTCGGGCGACAAAGCTTGTTGG
CAGGGGCGGAGCCAGGATGAAAAACAAGAGGGGGCAAAGATATGTTTTTTTTTCAGAAATATGTATACAAGCTAATGGCT
GGATCATTTCAAAAACCAACCACACAAGCATACATATAGTGTGTAAGAACTAAAATCGCATATATGTTCTTATATGACAA
TGTGAACACACACATGATTATGACACAATCATTGCAAAAGAAAAGTAAACTAACCACTGAAGGCACAATAGCTTGAGAAA
TATGAATACGTCATTCCTTTTTGTTGCTACATCCCTGATTTCTAGCCTTAGAGCTACACGAAAAAGAAACACATTTTATA
AAATAGAGAGTGTAAACATTTGTAGATAAAGAAAATCTTAAGCACGTTACCTCCTTCCGTTTCATCGCACGACGATTTTT
CCCATGTAAGGTAATTTCTCCTAATCTCCCCATGATTGTTGATATTAAATAGGTAAGTCTCTTCTTTTTGGATGGATCCC
GTGTAAGCTATTTAGATCAACTATTTCAGGCATACTGCAGTTGCCGATTTTACAAAACATCTCTCTATTAGCTTGCCTGT
CAATGCCATATAGTTCAATGTTAAATAAATTGAAATACATGAAGGCAGAATATTGCTACAGATTTTATTCTACTCCCACG
TGCTCAAACTTATTCATACAAAATTATTACGCAAAGCAAGATCCAATCAATCTAATAATCAATTTGTACATTATAATGTA
CACACATGGATATTTGATACAATTTGTTACCTTTTTAACATGAAAATCAGAATAGGTTTGTAAGCAATCTATTTCTCATA
CACGGGCTTTAAAAATACAACAGAAAACAAAGCAGCGGGGGCAAATATCTCGCCTGAGTTTTTTTTCGAAAAGGAGGAGG
ACCCCCGGCCTCTGCATCTGGACGATGCATGCAGCCACTTTATTAATTATTCACACAAGACCTTACAAAGTGACACAACA
GTACGACTAAAGCCACCGTCTAGGCAACATCTGTCGCTACTCCTATCCAGTTGATGAAGGGATGCTGATAGTCTGGGCCT
AATACCAAACAGACTTCGCAGCCAAACCTAACATCTAAGACCTAAGGTCCCAACCAGGACGTCTGCCGAGTATGGGGCAC
CCACCAGTCCGGCGCACTTCTCAACCAGGACGCCTGCCGGGTATGAGGCCGCCGGAGCCACCTGCCACCAATCCATCTTC
AGTGTTGTACTGCTGCATCCACCTTGCCCGGCCTCTCTGCCATCGACGCCACCATGACGTCATCCTCCTGCGCGAGTCCC
TCGTCACACATCAGACGCTGCGCCACGCCGCCGAGATACGCCACCACTAATGTGTACGATGAAGCACTGCTCCACCAAAT
AATCAGTCCACTGGTCCCTCGAGCCCGTGCACACCTTCAAGAATGACGCCACAAGAGGGAAACGACACAAAAATGCCGCC
GTCATCCGATCTACTGATCTAGGGTTTCCCCCGGAGGTAGCACGGCCTGGAACTTCTCAACAACGATGCCTTCAACAAGG
GAACGACACCGAATAGTGCCGCCATCGCCGGCCTCGGCAGCAGCCGCGAGCAGGTCTTCACCCAGATCCGTTCCAATGGC
CTCCATCAAGCTTCTTGTGCACGGATCGTCCAACATCGCAACCGCCGCATCGCCCATCGCGAGTCCACAGCCGCCGACAC
ATCCTCCGCCGTCCCGAGGCCGCCGCCCCGGGATCCAGCCCTCGCTGGCCGCCGAGTCCTGCCGCCGCATGCCCGAAGCG
CATCGGACTGGGACGCCGCAGACCGCGACCAGGCCTCGACCAGATCTGGGAAGAGGAATCAACCTTCGCCGCAACATCTA
GCCACGCGCCGGAGCATCCAAGCGCCGCCAGGCCCTGGCCAGCGCCCGCCACGGAGCCCCGCATCCCTAGGCCGCCGTGC
CCGCAAGTCCAGATCGAAGCTCCCGCGGACCTCCTCCAGCCGCTAGATGCTCCCAAGACGAGAGGGAAGAAGAGACCTAG
GGGAAACGCCCCGCCGCCGCCGTCACTGGAGCCCGCCCGGGCTTCGCCGACGGCGCCTCAGGCGGCGGCGCGACGAGGGA
GGAGAATGGGAGGGCGGTGGGTGTCGCTGGGAGTCGCCCGCGTGTCGCCAGAGGAGGGCGACGCGGGGGTTGTTGGGTGC
ACTCAAACAAACTTAGCTAGCATGCTTTTTAAAATTGGGGAGAATTTCACTTCCCCGGCCTCTGCACCAACTAGGGATGC
ATACGGCCATTTTAGTATGAGTACCAAAATAAACATGGTCCTCAGAATTTTTTAAATGAGTATCAAGATATTTTTTGATG
AGTGGTTTCACCATACACCAAACTTGATCCTCAATAAATGAGGGAAACCTCTTGTGCGTCATCTGTGAATTTTAAGAATT
AAACTCGGGTCGTTAGGCTGCACAACCGCATGCCCAACCACTGAGCCAAGGCTCTCTTTGCCCCCACAGCAATGCACGTA
GATTCGCCCCTGCTGCTTGTTGGAGGCGTTGTACTCTCACCCTG------------------------------------
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-------------AGCTAAGCCCGGAGGCGTGCTGCGTGGCTTCGTGTGTGAGGCTAGGGTTTCGTGTC-----------
--------------AGACGATGCGAAAACCCGGGGAGCACTGCACATGCACGCGGCCGGGATCGATGACTGCACGAGCAC
AGCGCCGGGCAACATGCACGAGCACAA-----------------------------------------------------
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---------------------------------------------------------CGCCTCCGCCACCACCTGACCGC
GCGCCGCGCGGGGATCCAATCCACCGGGCAAGGCATGGG-AACGATTCCTCGGTCTTCTCCTCC-CCAGCACACGCAGAT
GTGATGTGAGCATTTTCATGTGAGCCTGCGTAAACGCCCGCAACTGTACCCAGACGCATGCACGGCTTGTCTGATACTAT
ACGCTTCACATGTGTTTTCCTTTTTCTTTTTCCT----------------------------------------------
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-----------------------------------------------------------------G------------AA
GCATATGAAAAAATGGAAAATGTA---AGAATGAAGCCC-----------------------------------------
--TCTTCCCTCCTATAAAACC-CCTACCCCGACACCTACAGGAAGCCAGCTCTTCCTCTGCCCACCCAACAACATCAGAC
TCAGACCAGCAGCTCAACTCTCAACTTTCGT--CGATGGCGAAATGCAGCAAGATCCACAACATCGTCTTGCTCAGGCAG
ACCCTGCGGCGGTGGCGCTCCCGTGCCGCGGCGCGCGCCGCTGCGGATGACCGCGCG---GTGTCGGTGCCGGCGGGGCA
CGTGGCGGTGTGCGTGGGCAGCTCGTCTCGGCGTTTCGTGGTGCGCGCGGCGCACCTGAACCACCCCGTGTTCCGGGAGC
TGCTCCGGCAGGCGGAGGAAGAGTACGGGTTCCCGTCCGGCGCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGACGTCCTCCGCCGCGTCTCCTCCGAGGAGCGCCGCGGC------------------GTGCTGGCCGTCAGCAG
CCGCGACGTCGCGACGCGGCCGTTGCTGCAGAGGGTGGCGGCGGAGGAGCTCGTGTGGTGACTGGTGACC--GATCGATG
GGCATAGGCCATTCGGCA--------TACGTGCTCTGTTCTCACGTGAGGTAGCCCTGGCGATTTGACTCCGGCGGCGGC
---------------AGCAGCAAGC-CAGCAACTGGTCTTCCGGACGCAGAAATGGCGAAAGCATGCCGCGGC-------
AGGGAAGACT----CCGCCCGCCCAC--------------ACCGCCGGAGGCCC------GAATATCTTATTGACGGACG
TGGTC----------------------CGG-----------------------CGCCCCGAAACACGAACCGGTGACGGT
GCCGCGCGTGTGAGCAACGGAGGCTCTGTACGGCTTGACAAGTT-GACTGTAGTTAGAAGAAATTTGTA---GCGATTAG
TTCAAGATGAAGATGAAGATTTTTGTGATTGTCGTAATTAATCGGTAGCATTCCTTGCCGGTGATGATGAAGAATTGCTC
CGTGTTGCACATTCACTTTCTAATTGTCTGTCATGTGCTTCAACTCATTGGTGTTGGCTCT-------CCATGGGTGTCA
TTAGCTGTTGCATTAATGTATTATCTGTTTTCCTATCTCTCCATCGACTTAGAAGTTTCTTATTTATGTGCAAGATTGAC
AGCTTTGTAAACTCCGAGATCACATG------------------------------------------------------
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>chr2B_314
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-------------------GTATATCTTTTGAGGAGAAAACAGCGTTAATTACAACGCCATGACCAAGCTGAAGCTC---
--------------TACATGTACACGGCATTGCAATGCTCGTACCTTTAGGTAAAAAACTAGCACTCATGCAACACCCAC
AAAGAGTTGGCCAAGCCAAGCTCGGAGGCGTGCTGCGTGGCCCGAAAGCTACGAG-------------------------
-----TCCGACGAGAGACGACGCCAAAACCCGGGCGGGGA-GCACATGCATGCGGCCGGGATCGATGACTGCCGG---AC
AGCGTCGGGCCACATGCACCAGCCCACTGCACAGAGCCTCCGCCACCGGCAAAATTCACTGTTTTGACCTTTTTCGTTAG
TTTAGCACGATCTGACCTTATATGCAAAAGTTTTTCGAATCTGATCCTTTTCCCACCGTCGTTGTCTATGGCGGTAGGGT
AACACACCCTACCGCCAAGGCCTTTGGCGGTAGGACTTACCTGCACCGTCACTTTCATTTTTTGCAGAATGGAACCTACC
GCCGTAGTCGATGGCGGTAGGACGTGTAACCCTACCGCCATAGGCTATGGCGGTAGGGTTTTTTACAAAAAATAATCTTT
TATTGCATGCGTGCCCTTATTATAATTACATGCATGCCCCTACCGCCAAAGACCATTGCGGTAGGGTTCTTTTCACACCG
AACGGGCGTGACGGTGTAAGTAAGTCCTACCGCCAAAGGGCTTGACGGTAGGATGTGCTATCCTACCGCCAAAAACAATG
ACGGTAGAAAAAGGTCAGATCCGAAAAAAAGTTGCACACGTGGGTCAAAACAGTGAATTTCGCCTCCGCCAAAGACAAAG
ACAATAACGGTAGGGTCAAATCGTGCTTAAGTTAAAAAAAATCAAAACAGTGAATTTCGCCTCCGCCACCACCTGACCGC
GCGCCGA--GGGGATCCAATCCACCGGGCAAGGCATGGGCAACGATTCTTCAGACTTCGCTTTCTCCAGTACACGCCGAT
GTCATGTGAACATTTCCATGTGAGCCTGCGTAACCGCCCGCCACTGTACCCAGACGCATGCACGGCTTGTCTGATACTGT
ACGCATCACATGTGTTTTCCTTTTTTTCCTCAATCTTATCGTGTGTCTAGTAGAGTATCCTTTTAGCTGATTGGCAACGG
CAACAGCAATATAGTTTTTCCTTTAAACAAGATTCAAACCCCAGCCTCCGCATCATTGTGATGCACACCGCATTAGCTAA
ATAACAGTCTGCTGATTTTTAGATTGGGGTCAATTGATTTTTGACAGTTCATTGGAGGGAAGGAAAGAGAAGGAAGGGGC
TCATCGGAGGAATACCCCATTATCTATCTTAGGGTTTAGGGTGGGGGCGTTGGTGGACAACCGCGGTGATGGGGCTTTGC
CGGGGAAAAAACTTGATCCCGAGAGGGTGGGGCTAGAAGGATGGCCGGGGGCGGTGGAAGACCGGCGGTAGGGGTGATTC
AGGGGAGTGTGGGCCGGCGAGGTGGTCGCGGGAGCACCCCCAGCCGCGGGCGGCGGTGGCTAGCGGTGGGAGGAAGAAAG
GATGGAGGAAGGTGCAGGAGGTTGAAGAATTGTGCGGGCCGTTGATTTCGCATCCGACGGTTGCGAAAATCAACTGACCC
TGAACTTTTTTTTAGCTGAATGACGTATCGCCCAATGCACACAACCATCTTTACTAAAGTTGATGCAAATGCCAAGGTCA
TTAACAAGAGAAGTACAAAAAATAGGCAACTACGACAGAACCATACAAGAAATGAATGCAACACCTATGAATAAACCAAC
CTCTTACGCAACAATGCCATTCTCACACCTCCGTCGAAAATCATCAGGACGATGATTATCATCATGGATGGCGAGACCAA
CCGTTGAAGGCTAGCACTCGTCCAATAGAAGACGCCTTCAACGAGGTGACAACGCAAGTCCGCTACTGAGCACGACCAAA
AAATGACAAAAAAAAAAGTTTTTACCCTCAGTGACGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAACCACTGTTTACCCTGGACATGAAGTGGTATTTCAGTTGCAAACTTGATAATAGAACTTACGAAAGTCACGCC
AGTCAGAGTGCTCCATCGAGACCAAAGTGACCCTCAGTGCTACCTTCGTCCTGATTTATTGGTCCTCATTGTATTTTGTG
CCAAATTTTGATCATAACTTTAACTAATAAAATGTTCATGTATATTGCAAAAAATTATATCATTGGAAACATGTTCAAAT
ACGAATCTGACGATATAATTTTTTATAGGAAAATATGCATTTTTTTACAGGAATATGTAATATGT------------CAT
TTCCAAAGACATGGAGCAACTTTTAGAATTGTTTTTGTTTCAAGTCAGC----TAACCTGACATGCGAAAAG-TAAGGAC
AACAGTCACCGCTAGCGACCTTCGTTTGTGAGTAGAAAGTGTTTCAACTGAAAAATGTAAACACCG------------AA
GCATATGAGAAAATGGAAAATTTA---AATGAAGTCTTTTATTCCAGGCCAACCAGACAACGGAGGCAAGTCCCCATCGT
CTTC--CCCTCCTATAAAACCTCCT-CCCTGCCACCTACAGGAAGCCAGCTCTTCCTCTACCCACCCAACAACATCAGAC
TCAGACCAGCAGCTCAGCTCTCAACTGTCGT--CGATGGCGAAATGCAGCAAGATCCACAACATCGTCTTGCTCCGGCAG
ACCCTGCGCCGATGGCGGTCCCGTGCCGCGGCGCGCGCCGCTGCGGATGACCGCGCG---GTGTCGGTGCCAGCGGGGCA
CGTGGCGGTGTGCGTGGGCAGCGCGTCGCGGCGGTTCGTGGTGCGCACGGCGCACCTGAACCACCCCGTGTTCCGGGAGC
TACTCCGGCAGGCGGAGGAAGAGTACGGGTTCCCATCCGGCGCTTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGCCGTCCTCCGCCGCGTGTCCTCCGAGGAGCGCCTCGGC------------------GTGGCGGCCGTCATCAG
CCGCGACGTGGCGACACGGCCGTTGCTGCAGAGGGTGTCGGCAGAGGAGGTCGTGTGGTGACCGATCGATGGAAGCAACA
CGCATAGGCCATTCGGCA--------TACGTGCTCTGTTCGCAGGCAAGCTAGCCCTGGCGATTTAACTCCGGCGGCGGC
GACGGCGGCGGCGGCAGCGGTGGCAGCAGCAACTGGTATTCCGAACGCGGAAATGGCGAAAGCGTGCCGCGGC-------
CGGGAAGACT----CCGCCCGCTCAACCGCGCGCACGGCAAGCGCCCGATGCTC------GAATATCTTATTGAAGGACG
TGGCC----------------------CGGTGCCCGGTG-TAGCGGCCAG--------------------CGGGGACGGT
GCCGCGCGTG--AGCAACCGAGGCTCTGTAAGACTTGAAAAGTT-GACTGTAGTTAGAAGAAATTTGTA---GTGATTAT
TTCAAGATGAAGATGACGATTTTTGTGATTGTCGTAATTAAT-GGTAGCATTCCTAGCCGGTAAT---------------
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>chr2D_664
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----------GGAACATATGCGTAA----------------TTTTGATATGAATATGTAATTTAGTGTATTGTCATCCAT
TTCCGAAGACATGGGGCAACATATATATAT-TTTTTGTTTGAAATCAGC----TAACCTGACGTGCGAAAATATAAGGAA
AACAGTGAGCGCTAGTGACCTTCGTTTGTGAGTATGAAGTTATTCAACTGAAAAACGTAAATATTTAAACACCGAAGCAT
----ATGAGAAAA---------------ATGGAGTCTTTTATTCCAGGCCAACCGGATGACGGAGCCGAGTCCCCATCGT
CTTCTTCCCTCCTATAAAACCTCCTGCCCCGCCACCTACAGGAAGCCAGCTCTTCCTCTGCCCACCCAACAACATCAGAC
TCAGACCAGCAGCTCAGCTCTCAACTTTCGT--CGATGGCGAAATGCAGCAAGATCCACAACATCGTCTTGCTCCGGCAG
ACCCTGCGACGGTGGCGCTCCCGTGCCGCGGCGCGCGCTGCTGCGGGCGACGGCGCG---GTGTCGGTGCCGGCGGGGCA
CGTGGCGGTGTGCGTGGGCGGCGCGTCGCGGCGGTTCGTGGTGCGGGCGGCGCACCTGAACCACCCCGTGTTCCGGGAGC
TGCTCCGGCGGGCGGAGGAGGAGTACGGGTTCCCGTCCGGCGCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGACGTCCTCCGCCGCGTCTCCTCCGAGGAGCGCCGCGGC------------------GTGCCGGCCGCCAACAG
CCGCGACGTGGCGACGCGGCCGTTGCTTCAGAGGGTGGCGGCGGAGGAGCTCGTGTGGTAACCGATCGATGGAAGCCACA
CGGATTGGCCATT---CA--------TACGTGCTCTGTTCTCACATGAGATAGCCCTGGCGATGTGACTCCGGCGGCGGC
---------------AGTGGAGGAAGCAGCAGCTGGTCTTCCGGACGCGGAAATGGCGAAAGCATGCCGCAGC-------
CTGGAAGACA--------CCACCCGCCCGTGCGCACGACAGGTGCCCGAGG-----------------TATTGAAGGACG
TGGTCTGGTGCCCGGTGTAGCGGCCAGCGG-----------------------CGCCCCGAAACACGAATCGGGGACGGT
GCCGCGGGTG--AGCAACCGAGGCTCTGTAAGGCTTGAAAAGTT-GACTGCAGTTAGGAGAAATCTGTA---GTGATTAG
TTAAAGATGAAGATGACGGTTTTTGTGATTGTCGTAATTAATCTGTAGCATTCCTTGCCGGTAAT---------------
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>chr2A_971
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-------------ATAAAACATCCTGCCCCGCCACGTACAAGAAGCCATCTCTTCGTCTGCCCACCCAACAACATCAGAC
TCAGACCAGCAGCTCAGCTCTCAACTGCCGT--CGATGGCGAAATGCAGCAACATCCACAACACCGTCTTGCTCCGGCAG
ACCCTGCGGCGCTGGCGGTCCCGTGCCGCGGCGCGCGCTGCTGCGGATGACGGCGCG---GTGTCGGTGCCGGCGGGGCA
CGTGGCGGTGTGCGTGGGCGGGGCGTCGCGGCGGTTCGTGGTGCGGGCGGCGCACCTGAACCACCCCGTGTTCCGGGAGC
TGCTCCGGCAGGCGGAGGAGGAATATGGGTTCCCGTCCGGCGCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCAC
TTCCGGGACGTCCTACGCCGCCTCTCCTCCGACGAGCGCCGCGGC------------------GTGTCAGCCGTCAGCAG
CCGCGATGTCGCCACGCGGCCGTTGCTGCCGAGGGTGGCGGCGGAGGAGCTCGTGTGGTGACTGCTGACGGAT--CAATG
GGCATAGGCCATTCGGCA--------TACGTGCTCTGTTCTCACATGAGGTAGTCCTGGCGATTTGACTCCGGCGGCGGC
---------------AGCGGTGGCAGCAGCAACT----------------------------------------------
--GGAAGACT----CCGCCCGCCCACCGGCGTGCACGGCAAGCGCCGGAGGCCC------GCATATCTTATTGACGGACG
TGGTC----------------------CGGTGCCTGGTG-TAGCGGCCAGCGGCGCCCCGAAACACGAGCCGGTGACGGT
GCCGCGCGTG--AGCAAC-------------GGCTTGACAAGTT-GACTGTAGTTAGAAGAAATTTGTA---GTGATTAG
TTCAAGATAAATATGACGATTTTTGTGATTGTTGTAATTAATCGGTTGCATTCCTTGCCGGTAATGGTAAAGAATTGCTA
AT------------------------------------------------GTCTTGGCTCTCCATGGACCATGGGTGTCA
TTAGCTGTTGCATTA--------TCTGTTTTGCTAACTATCCATCGACTAAGAACTTTCTGTTTAATGTGCGAGATTCAC
CGCTTTATAAACTCCGAGATCACATGTTAAGGATAACCGCGGCCGAGATCAATGTAATGTTTTAAGAGTTTTTTTTCGAA
AATAAAGATAACCCAGCCTTCGCATCGAA-AGATGCACACAGCCATTTTATTATTTTGTTTTATTTTAGTTTTGCGGAAT
T-TTTTCGATCTATTCATCTTCAATCATGGCAGGCGCGCCACCGTCATCGCCCCTCCCTCGTTAGAGCCGAGCAAAACTT
GTTGTAGTAGACAGTTGGTAAGTCGTCGTGCTAAGGCATCGTAGGACCAACACACTAGAATAGCAATCGCCGCCGATAAA
GAGTAGCGTGGATCGGAAGGATCCAATCTAAAGACAC----------ACGAACGATGACCAGATCCACC-----------
----GGAGACACGCCTTCACACGCCTACTGACGATGCTAT---ATGCACCACCAGAGAGGGGTCTAGGCAGTGAAGACTT
TATTCCATCTTCAGGGAGACACCGCCGTCTCGCCTTTCTAAGCATGGCACGATCCCAAAACTCAAAGAGAGATCTAAAAC
A-GAGCCCCCCGCCGGCAAGAGCCAGAATCCACTGCACCCTCATGGCCCTAAGGCTACTGGAGACGAGGTGGACCGGCTG
CAACACCAGAGGGAGGCGGGGGAACCCTAAGCTTTTTAGGGGAGAGGAGCCAGAGGTGGCGGCGGCTGTGTCGATCCTTT
GGCTAGCTAGCCATTTTATTAACTTATTTAATA-----------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr2D_1042
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----ACCAGAAGCTCGCCCCTCAACCTCCCATCCCATGGCGAAATGCAGCAAGATCCGCGACATCGTCTGGCTCCGGCAG
ACCCTGCGGAGGTGGCGGTCCCGCGCCGCGGCGCGCGTGGCCGCCGAGGGCGGC------GTGACGGTGCCGGCGGGGCA
CGTGGCGGTGTGCGTGGGCGGGGCCTCGCGGCGGTTCGTGGTGCGGGCGGCGCACCTGAACCACCCCGTCTTCCTCGAGC
TGCTCCGGCAGGCGGAGGAGGAGTACGGGTTCCGGACCGGCGCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGACGTCCTCCGCCGCGTCTCCTCCGAGGACCGCCGAGGCCGTTCGTTCGGCTGCCCCGCGCCGGCTGCCAGCGG
CCGAGACCTCGCGACGCGGCCGTTGCTGCAGCGGGCGGCGGCGGAGGAGCTCGTGTGGTGACGGATCGATGGAAGCAACT
CGCATTGGCCATTCGGTG--------TGCGTGCTCTGTTCTCAGGCAAGCTACCCGTGGCGAACTG--------------
--------------------------CGGCGGCTGGTCTTCCGGACGCCGGAATGGCGCAAGCATGCCGCGGCCCGCGGC
CGAGAAGACT----GCGCCCGCCCACCCGCGCGCACAGCAAGCGCCCGAGGCCC------GAATATCTGATTGAAGGGCG
TGGGC----------------------CGGTGGCCGGTGGTAGTGGCCGGCGGCGCCCCAAATTGTGAATCGGAGACGGC
GCCGCGCTTG--AGCA----------------------------------------------------------------
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>chr2B_1044
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------CAGAAGCTCGCCCCTCAACCTCCCATCCCATGGCGAAATGCAGCAAGATCCGCGACATCGTGTGGCTCCGGCAG
ACCCTGCGAAGGTGGCGGTCCCGCGCCGCGGCGCGCGTGGCCGAGGGCGGCGCGGCGCCCGTGACGGTGCCGGCGGGGCA
CGTGGCGGTGTGCGTGGGCGGGGCCTCGCGGCGGTTCGTGGTGCGGGCGGCGCACCTGAACCACCCCGTCTTCCTCGAGC
TGCTCCGGCAGGCGGAGGAGGAATACGGCTTCCGGACCGGCTCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGACGTCCTCCGCCGCGTCTCCTCCGAGGAGCGCCGCGGCCGTTCGTTCGGCTGCCGCGCCCCGGCCGCCAGCAG
CCGAGACGTCGCGACGCGGCCGCTGCTGCAGCGGGCGGCGGCGGAGGAGCTCGTCTGGTGACGGACCGATGGGAGCAATA
CGCATAGCCCATTCGGTG--------TACGTGCTCTGCTCTCAGGCAAGCTAGCCGTGGCGATTTG--------------
-----------------CGGCGCCAACGGCGACTGGTCTTCCGGACGTGGGAATGGCACAAGCATGCCGCGGC-------
CGAGAAGACTGCGCCCGCCCGCCCGCCCGCGCGTACAGCAAGCGCCTGAGGCCTGAAGCTGAATGTCTCATTGAAGGGCG
TGGTC----------------------CGGTG------G-TAGTGGCCGCCGGCGCCCCGAATTGTGAATCGGAGACGGC
GCCGCGCTTG--AGCAACTGAG----------------------------------------------------------
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>chr2A_1050
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------------CTCAAGTCTCAACTG-----CCGATGGCCAAATGCAGCAAGATCCGCGACATCGTCTGGCTCCGGCAG
ACCCTGCGGAGGTGGCGGTCCCGCGCCGCGGCGCGCGTGGCCGAGGGCGGCG------------CGGTGCCGGCAGGGCA
CGTGGCGGTGTGCGTGGGCGGGGCCTCGCGGCGGTTCGTGGTGCGGGCGGCGCACCTGAACCACCCCGTCTTCCTCGAGC
TGCTCCGGCAGGCGGAGGAGGAGTACGGCTTCCGGACCGGCGCGTGCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCCGGGACGTCCTCCGCCGCGTCTCCTCCGAGGAGCGCCGCGGCCGTTCCTTCGGCTGCCGCGCGCCGGCCGCCAGCGG
GCGAGACATCGCGGCGCGGCCGTTGCTGCAGCGGGCGGCGGCGGAGGAGCTCGTGTGGTGACGGATCGATGGAAGGAACA
CGCATAGGCCATTCGGTG--------TACGTGCTCTGTTCGCAGGCGAGCTAGCGGTGGCGAATTG--------------
--------------------------CGGCGGCTGGTCTTCTGGACGCGGGAATGGCGCAAGCATGCCGCGGC-------
CGAGAAGACT----GCGCCCGCC-GCCCGCGCGCACAGCAAGCGCCCGAGGCC-------GTATATCTGACTGAAGGGCG
TGGTC----------------------CGGTG------G-TAGTGGCCCGTGGCGCCCCGAATTGTGAATCGGAGACGGC
ACCGCGCTTG--AGCAACTGAG----------------------------------------------------------
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>chr2B_1150
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----------------------------------GCGCCGCTGCGGATGACCGCGCG---GTGTCGGTGCCAGCGGGGCA
CGTGGCGGTGTGCGTGGGCAGCGCGTCGCGGCGGTTCGTGGTGCGCACGGCGCACCTGAACCACCCCGTGTTCCGGGAGC
TACTCCGGCAGGCGGAGGAAGAGTACGGGTTCCCATCCGGCGCTTCCGGCCCCATCGCGCTCCCCTGCGACGAGGACCGC
TTCTGGGCCGTCCTCCGCCGCGTGTCCGCCGAGGAGCGCCGCGGC------------------GTGCCGGCCGTCAGCAG
CAGCGACGTCGCGGCGCGGCCGTTGCTGCCGAGGGTGGCAGCGGAGGAGCTCGTGTGGTGACCGATCGATGGAAGCAACA
AGCATAGGCCATTCGGCATACGTGGCTACGTGCTCTGTTCTCACATGAGGTAGCCCTGGCGATTTGACTCCGGCGGCGGC
---------------AGCGGTGGCAGCAGCAACTGGTCTTCCGTACGCGGAAATGGCGAAATCATGTCGCCGC-------
AGGGAAGACT----CCGCCCGCCCAGCCGCGCACACGGCAACCGCCGGAGGCCC------GAATATCTTATTGACGGACG
TGGTC----------------------CGGTGCCCGGTG-TAGCGGCCAGCGGCGCCCCGAAACACGAATCGGGGACGGT
GCCGCGCGTG--AGCAACCGAGGCTCTGTACGACTTGGAAAGTT-GATTGTAGTTAGAAGAAATTTTTAGTAGTGATTAG
TTCAAGATGAAGATGACGATTTTTGTGATTGTCCTAATTAATCTGTAGCATTCCTTGCCGGTAAT---------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S---S----S-----S-------------------------------------S--SS-S--------------------
--S------S--------S-----SSS--S-------S------S-S---S-S-S-------------------------
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-------------------------------S--S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-----S------------------S-------S----------S-----SSS--S---SSS
SSSSSSSSSSSSSS-----S------------S---------------SSSSSS--------------------------
---SSS-S-------------------S---------------------S--SS-SS-SSS---SSSSSSSSSSSSSSSS
SSSSS-----------SSSSSSS-SS-SS-SSS---S-SSS-S-------------------------------------
------------------SSS---S--SS-SS-SS-S-SSS--SSS--SSSSSSSSS-SSSSSSSS-S------------
--------------------------------------------------------------------------------
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--------------------------------------------------------SS----------------------
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------------------------------------------------------------------S----SSS-----S
-SSS--SS--------S-------S----------------------------------S--S--------S-SS-----
------S----------SS------------------------------SSSS-------------------SS------
----S-----S-----------S---------------S-----------------------------------------
---------S---SS-----S-SSSSS---------------S------------S------------------S-----
-------------------------S-----------------------------------------------SS-----
--------------------------------------------------------------------------------
-------S----------------------------------S--------S--SS------------------------
---------------------------------------S----------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------S---------------------------------------S-----
------S--------------------------------------------------------------------S----
------------------S------S------S-----------------------------------------------
S--------------------------------------------------S----------------------------
-S---S----S----------S-S--------------------------------------------------------
----------------------S---------------------S-----------------------------------
-------------------S------------------------S---------------S-------------------
--------------------------------------------------------------------------------
----------S--------------------------------S---S--------------------------------
-S-------S----------------SS----------S-------------S---------------------SSSS--
--S--S------S-S---S-SSSSSSSS-S-----------S--------------------S-----SS--S----S-S
SS------------------------------S-----S-SS--------S---------SSS-------S---------
----S----S-S------S------S-------------------S---S----------S-S---------SS---S--
---------S-----S-------------S-------SSSSSSSSSS-----------S----------SSSSSSSSSSS
SSSS--------S---S-----------S-----------SSS----------S--SS----S--------SS-S---S-
------------------SSS--S---------S--S--S------S---S-S---------S-----S----------S
SS------S--SS--S------S-S-S------S--S------------------S-------------S----S-----
--S-S--S-S----S--S-S----------------S---S--------S-S-S--------------------------
---------------------SS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS
>forward_3032
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----------------------------------------------------TTGGCGATCTTCCGAAAGCT--------
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>reverse_7062
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---------------------TGCAACGAGAGATGCACACA---------------------------------------
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-----------------------
